eg_v1.0.alternate_g1245.t1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of eg_v1.0.alternate_g1245.t1 vs. ExPASy TrEMBL
Match: V4UQB1|V4UQB1_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10009026mg PE=4 SV=1) HSP 1 Score: 590.497 bits (1521), Expect = 0.000e+0 Identity = 286/292 (97.95%), Postives = 288/292 (98.63%), Query Frame = 0 Query: 1 MFILSTCAPILPVIDFSRHLNNRLAPFSAVTLSTQSHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE--DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSDFVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI 290
MFIL+TCAPILPVIDFSRHLNNRLAPFSAVTLSTQ+HAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIG LGGCNSMNMQLSQSHMDKRPSYD ISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSDFVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI
Sbjct: 1 MFILNTCAPILPVIDFSRHLNNRLAPFSAVTLSTQNHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVEVEDEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGRLGGCNSMNMQLSQSHMDKRPSYDVISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSDFVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI 292
BLAST of eg_v1.0.alternate_g1245.t1 vs. ExPASy TrEMBL
Match: A0A067EZL7|A0A067EZL7_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g022793mg PE=4 SV=1) HSP 1 Score: 588.571 bits (1516), Expect = 0.000e+0 Identity = 285/292 (97.60%), Postives = 287/292 (98.29%), Query Frame = 0 Query: 1 MFILSTCAPILPVIDFSRHLNNRLAPFSAVTLSTQSHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE--DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSDFVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI 290
MFIL+TCAPILPVIDFSRHLNNRLAPFSAVTLSTQ+HAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIG LGGCNSMNMQLSQSHMDKRPSYD ISGANVTPTTFYN GDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSDFVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI
Sbjct: 1 MFILNTCAPILPVIDFSRHLNNRLAPFSAVTLSTQNHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVEVEDEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGRLGGCNSMNMQLSQSHMDKRPSYDVISGANVTPTTFYNTGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSDFVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI 292
BLAST of eg_v1.0.alternate_g1245.t1 vs. ExPASy TrEMBL
Match: A0A2H5PDI3|A0A2H5PDI3_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_126580 PE=4 SV=1) HSP 1 Score: 587.415 bits (1513), Expect = 0.000e+0 Identity = 284/292 (97.26%), Postives = 287/292 (98.29%), Query Frame = 0 Query: 1 MFILSTCAPILPVIDFSRHLNNRLAPFSAVTLSTQSHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE--DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSDFVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI 290
MFIL+TCAPILPVIDFSRHLNNRLAPFSAVTLSTQ+HAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIG LGGCNSMNMQLSQSHMDKRPSYD ISGANVTPTTFYN GDLEIQDNLARIW+DIGTTEPLLLDVLINALTQISSDFVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI
Sbjct: 1 MFILNTCAPILPVIDFSRHLNNRLAPFSAVTLSTQNHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVEVEDEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGRLGGCNSMNMQLSQSHMDKRPSYDVISGANVTPTTFYNTGDLEIQDNLARIWMDIGTTEPLLLDVLINALTQISSDFVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI 292
BLAST of eg_v1.0.alternate_g1245.t1 vs. ExPASy TrEMBL
Match: V4WDN7|V4WDN7_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10009026mg PE=4 SV=1) HSP 1 Score: 579.711 bits (1493), Expect = 0.000e+0 Identity = 285/303 (94.06%), Postives = 288/303 (95.05%), Query Frame = 0 Query: 1 MFILSTCAPILPVIDFSRHLNNRLAPFSAVTLSTQSHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE--DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFN-----------KFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSDFVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI 290
MFIL+TCAPILPVIDFSRHLNNRLAPFSAVTLSTQ+HAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFN +FDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIG LGGCNSMNMQLSQSHMDKRPSYD ISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSDFVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI
Sbjct: 1 MFILNTCAPILPVIDFSRHLNNRLAPFSAVTLSTQNHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVEVEDEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNNCFVNLPTCIARFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGRLGGCNSMNMQLSQSHMDKRPSYDVISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSDFVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI 303
BLAST of eg_v1.0.alternate_g1245.t1 vs. ExPASy TrEMBL
Match: A0A067F7Z5|A0A067F7Z5_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g022793mg PE=4 SV=1) HSP 1 Score: 524.628 bits (1350), Expect = 0.000e+0 Identity = 260/292 (89.04%), Postives = 262/292 (89.73%), Query Frame = 0 Query: 1 MFILSTCAPILPVIDFSRHLNNRLAPFSAVTLSTQSHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE--DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSDFVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI 290
MFIL+TCAPILPVIDFSRHLNNRLAPFSAVTLSTQ+HAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIG LGGCNSMNMQLSQSHMDKRPSYD ISGANVTPTTFYN GDLEIQDNLARI FVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI
Sbjct: 1 MFILNTCAPILPVIDFSRHLNNRLAPFSAVTLSTQNHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVEVEDEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGRLGGCNSMNMQLSQSHMDKRPSYDVISGANVTPTTFYNTGDLEIQDNLARIC------------------------FVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI 268
BLAST of eg_v1.0.alternate_g1245.t1 vs. ExPASy TrEMBL
Match: A0A067F746|A0A067F746_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g022793mg PE=4 SV=1) HSP 1 Score: 518.464 bits (1334), Expect = 0.000e+0 Identity = 251/259 (96.91%), Postives = 254/259 (98.07%), Query Frame = 0 Query: 1 MFILSTCAPILPVIDFSRHLNNRLAPFSAVTLSTQSHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE--DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSD 257
MFIL+TCAPILPVIDFSRHLNNRLAPFSAVTLSTQ+HAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIG LGGCNSMNMQLSQSHMDKRPSYD ISGANVTPTTFYN GDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISS+
Sbjct: 1 MFILNTCAPILPVIDFSRHLNNRLAPFSAVTLSTQNHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVEVEDEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGRLGGCNSMNMQLSQSHMDKRPSYDVISGANVTPTTFYNTGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSE 259
BLAST of eg_v1.0.alternate_g1245.t1 vs. ExPASy TrEMBL
Match: V4UK77|V4UK77_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10009026mg PE=4 SV=1) HSP 1 Score: 481.871 bits (1239), Expect = 2.644e-170 Identity = 256/303 (84.49%), Postives = 260/303 (85.81%), Query Frame = 0 Query: 1 MFILSTCAPILPVIDFSRHLNNRLAPFSAVTLSTQSHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVEDEDVDVED--KTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFN-----------KFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSDFVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI 290
MFIL+TCAPILPVIDFSRHLNNRLAPFSAVTLSTQ+HAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE ED DV+ KTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFN +FDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIG LGGCNSMNMQLSQSHMDKRPSYD ISGANVTPTTFYNIGDLEIQDNLARI FVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI
Sbjct: 1 MFILNTCAPILPVIDFSRHLNNRLAPFSAVTLSTQNHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVEVEDEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNNCFVNLPTCIARFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGRLGGCNSMNMQLSQSHMDKRPSYDVISGANVTPTTFYNIGDLEIQDNLARIC------------------------FVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI 279
BLAST of eg_v1.0.alternate_g1245.t1 vs. ExPASy TrEMBL
Match: A0A067EW47|A0A067EW47_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g022793mg PE=4 SV=1) HSP 1 Score: 472.241 bits (1214), Expect = 7.476e-167 Identity = 228/239 (95.40%), Postives = 231/239 (96.65%), Query Frame = 0 Query: 1 MFILSTCAPILPVIDFSRHLNNRLAPFSAVTLSTQSHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE--DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIG 237
MFIL+TCAPILPVIDFSRHLNNRLAPFSAVTLSTQ+HAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIG LGGCNSMNMQLSQSHMDKRPSYD ISGANVTPTTFYN GDLEIQDNLARIW +
Sbjct: 1 MFILNTCAPILPVIDFSRHLNNRLAPFSAVTLSTQNHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVEVEDEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGRLGGCNSMNMQLSQSHMDKRPSYDVISGANVTPTTFYNTGDLEIQDNLARIWYGLA 239
BLAST of eg_v1.0.alternate_g1245.t1 vs. ExPASy TrEMBL
Match: A0A2H5PDL8|A0A2H5PDL8_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_126580 PE=4 SV=1) HSP 1 Score: 439.113 bits (1128), Expect = 4.282e-154 Identity = 227/292 (77.74%), Postives = 231/292 (79.11%), Query Frame = 0 Query: 1 MFILSTCAPILPVIDFSRHLNNRLAPFSAVTLSTQSHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE--DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSDFVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI 290
MFIL+TCAPILPVIDFSRHLNNRLAPFSAVTLSTQ+HAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQ R K+K AIRAWHIIG LGGCNSMNMQLSQSHMDKRPSYD ISGANVTPTTFYN GDLEIQDNLARIW+DIGTTEPLLLDVLINALTQISSDFVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI
Sbjct: 1 MFILNTCAPILPVIDFSRHLNNRLAPFSAVTLSTQNHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVEVEDEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQ--------RAKSK-----------------------------------------------AIRAWHIIGRLGGCNSMNMQLSQSHMDKRPSYDVISGANVTPTTFYNTGDLEIQDNLARIWMDIGTTEPLLLDVLINALTQISSDFVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI 237
BLAST of eg_v1.0.alternate_g1245.t1 vs. ExPASy TrEMBL
Match: A0A5C7HYT0|A0A5C7HYT0_9ROSI (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_012879 PE=4 SV=1) HSP 1 Score: 432.565 bits (1111), Expect = 7.713e-151 Identity = 217/291 (74.57%), Postives = 240/291 (82.47%), Query Frame = 0 Query: 1 MFILSTCAPILPVIDFSRHL-NNRLAPFSAVTLSTQSHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVEDEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSDFVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI 290
M IL TC+P LP SRHL NR +PFS VTLS ++HA R T +FVS+A+K + EV ID ++ED + T SRK GR + KDYDKDPEFA+ILGS LDDPQ+A+SKM DRLK KR+KILHTKTGS P+KVTFNKFDFSNSYIWFE YNAPLE+DVSLICDA+RAWHIIG LGGCNSMNMQLSQS MDKRP+YDAI GANVTPTTF NIGDLEIQ+NLAR+WVDIGTTEPLLLDVLINALTQ+SSDFVGIKQLVFGGSEFENWKENL SE GCSVHKI
Sbjct: 1 MLILHTCSPTLPFTQISRHLITNRFSPFSTVTLSVRNHA-RPSGTSLFVSKAKKSETEVDID-----DEEDTE----TRSRKKVGGRAQQ--KDYDKDPEFAEILGSVLDDPQKAQSKMEDRLKKKRNKILHTKTGSGAPMKVTFNKFDFSNSYIWFELYNAPLEKDVSLICDAMRAWHIIGRLGGCNSMNMQLSQSPMDKRPNYDAIGGANVTPTTFLNIGDLEIQENLARVWVDIGTTEPLLLDVLINALTQLSSDFVGIKQLVFGGSEFENWKENLTSEVEGCSVHKI 279
BLAST of eg_v1.0.alternate_g1245.t1 vs. Araport11
Match: AT4G29400.1 (| oxidoreductase/transition metal ion-binding protein (DUF3531) | Chr4:14466350-14467980 FORWARD LENGTH=302 | 201606) HSP 1 Score: 334.339 bits (856), Expect = 2.773e-115 Identity = 152/211 (72.04%), Postives = 185/211 (87.68%), Query Frame = 0 Query: 80 RKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSDFVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI 290
R YR ++ E DYDKDPEFADILG CLD+P +A+ KM +RL+ KR+KILHTKTGSAT + VTFNKF++SNSY+W EFYN PL++D++LI D IR+WHI+G LGG NSMNMQLSQ+ +DKRP+YDAI GANV PTTFYNIGDLE+QDN+ARIW+DIGT+EPL+LDVLINALTQISSD+VGIK++VFGGSEFE+WKEN+ SE++G VHKI
Sbjct: 94 RGVYRAKK--EKIDYDKDPEFADILGDCLDNPDKAQKKMEERLRKKRNKILHTKTGSATSMPVTFNKFEYSNSYMWLEFYNTPLDKDIALISDTIRSWHILGRLGGYNSMNMQLSQAPLDKRPNYDAILGANVEPTTFYNIGDLEVQDNVARIWLDIGTSEPLILDVLINALTQISSDYVGIKKVVFGGSEFESWKENMTSEESGFRVHKI 302
BLAST of eg_v1.0.alternate_g1245.t1 vs. Araport11
Match: AT5G08400.2 (| structural maintenance of chromosomes-like protein%2C putative (DUF3531) | Chr5:2707225-2708911 REVERSE LENGTH=300 | 201606) HSP 1 Score: 178.718 bits (452), Expect = 2.540e-54 Identity = 105/314 (33.44%), Postives = 163/314 (51.91%), Query Frame = 0 Query: 1 MFILSTCAPILPVIDFSRHLNNRLAPFSAVTLSTQSHAPRLIRTPVFVS-QAQKLQGEVGIDVDVEVEDEDVDVEDKTTSRKAYRGRR------SEEGKDYDK-----------------DPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSDFVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI 290
+ LS+C + +LN +PF S R + T V VS + L GE ++ + +K + A RGRR + +DYD+ D E +LG + +P+ + K+ +R++ K KTGS KV F F+ +S+IWFE Y P +RDV LI I+AW+++G LG N+ N+QL+ + ++ P YDA G V P++F++I D+E QDN R+WVD+GT++ LDVL+N LT +SS+++GI+Q+VFGG +W+E + + D G KI
Sbjct: 6 LLTLSSC---------TMNLNFAFSPFLVSQRQPFSSHKRNLHTLVAVSANSDNLAGE---------DNGGISAANKGSGTTA-RGRRLLKVREEKRKRDYDRLHDYPSWAKVLESACKDDEELRAVLGDSIGNPELMRKKVEERVRKKGKDFQKQKTGSVLSFKVNFRDFNPVDSFIWFELYGTPSDRDVDLIGSVIQAWYVMGRLGAFNTSNLQLANTSLEYDPLYDAEKGFKVMPSSFHDISDVEFQDNWGRVWVDLGTSDIFALDVLLNCLTVMSSEYLGIQQVVFGGKRMGDWEEGMTNPDFGYKYFKI 300
BLAST of eg_v1.0.alternate_g1245.t1 vs. Araport11
Match: AT5G08400.1 (| structural maintenance of chromosomes-like protein%2C putative (DUF3531) | Chr5:2707225-2708911 REVERSE LENGTH=333 | 201606) HSP 1 Score: 176.407 bits (446), Expect = 5.401e-53 Identity = 80/194 (41.24%), Postives = 123/194 (63.40%), Query Frame = 0 Query: 97 DPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSDFVGIKQLVFGGSEFENWKENLKSEDAGCSVHKI 290
D E +LG + +P+ + K+ +R++ K KTGS KV F F+ +S+IWFE Y P +RDV LI I+AW+++G LG N+ N+QL+ + ++ P YDA G V P++F++I D+E QDN R+WVD+GT++ LDVL+N LT +SS+++GI+Q+VFGG +W+E + + D G KI
Sbjct: 140 DEELRAVLGDSIGNPELMRKKVEERVRKKGKDFQKQKTGSVLSFKVNFRDFNPVDSFIWFELYGTPSDRDVDLIGSVIQAWYVMGRLGAFNTSNLQLANTSLEYDPLYDAEKGFKVMPSSFHDISDVEFQDNWGRVWVDLGTSDIFALDVLLNCLTVMSSEYLGIQQVVFGGKRMGDWEEGMTNPDFGYKYFKI 333 The following BLAST results are available for this feature:
BLAST of eg_v1.0.alternate_g1245.t1 vs. ExPASy TrEMBL
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of eg_v1.0.alternate_g1245.t1 vs. ExPASy TrEMBL
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of eg_v1.0.alternate_g1245.t1 vs. Araport11
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs Araport11) Total hits: 3 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus glauca CRC3463 v1.0 v1.0 proteins
Date Performed: 2024-01-20 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >eg_v1.0.alternate_g1245.t1-ucr_v1 ID=eg_v1.0.alternate_g1245.t1-ucr_v1; Name=eg_v1.0.alternate_g1245.t1; organism=Citrus glauca; type=mRNA; length=873bpback to top protein sequence of eg_v1.0.alternate_g1245.t1-ucr_v1 >eg_v1.0.alternate_g1245.t1-ucr_v1 ID=eg_v1.0.alternate_g1245.t1-ucr_v1; Name=eg_v1.0.alternate_g1245.t1-ucr_v1; organism=Citrus glauca; type=polypeptide; length=290bpback to top mRNA from alignment at Alt_Scaffold_1:11940032..11943389+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=3358bp; location=Sequence derived from: Alt_Scaffold_1:11940032..11943389+ (Citrus glaucaback to top Coding sequence (CDS) from alignment at Alt_Scaffold_1:11940032..11943389+ >eg_v1.0.alternate_g1245.t1-ucr_v1 ID=eg_v1.0.alternate_g1245.t1-ucr_v1; Name=eg_v1.0.alternate_g1245.t1; organism=Citrus glauca; type=CDS; length=873bp; location=Sequence derived from: Alt_Scaffold_1:11940032..11943389+ (Citrus glaucaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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