eg_v1.0.alternate_g24936.t1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of eg_v1.0.alternate_g24936.t1 vs. ExPASy TrEMBL
Match: A0A2H5MYU4|A0A2H5MYU4_CITUN (F-box domain-containing protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_006090 PE=4 SV=1) HSP 1 Score: 649.047 bits (1673), Expect = 0.000e+0 Identity = 311/320 (97.19%), Postives = 317/320 (99.06%), Query Frame = 0 Query: 19 SGSISTIHPDIIETHILSRLDASALASTSCVSSQLHSLIASNESLWTNICNSTWPSIDIPRLRHVISSFPNGPRSFFSDSFTNPDIAASSSPVNLDCPSGLISAVDIYYQHKPILSKAVLTESFDTSPFRVDLLDPKDSVPTGVGQPVNEDLSRELGERLTLSWILIDPIGRRAMNLSSYKPVTVERRSLSTGEVHVRYGWVFNAGEKGSTTECVRCGISVTCEGSQNQSGEMHLTKLSLELEDMYGKQLSGEDSLVILRKGMAGKRGNVKGREEEGKRRNEDYRAMRREKILSEAKKHQGRIDTLYMAFGALIFASLGL 338
SGSISTIHPDIIETH+LSRLDASALASTSCVSSQLHSLIASNESLWTNICNSTWPS DIPRLRHVISSFPNGPRSFFSDSFTNPDIAASSSPVNLDCPSGLISAVDIYYQHKP+LSKAVLTESFDTSPFRVDLLDPKDSVPTGVGQPVNEDLSRELGERLTLSWILIDPIGRRAMNLSSYKP+TVERRSLSTGEVHVRYGWVFNAGEKGSTTECVRCGISVTCEGSQNQSGEMH+TK+SLELEDMYGKQLSG+DSLVILRKGMAGKRGNVKGREEEGKRRNEDYR MRREKILSE KKHQGRIDTLYMAFGALIFASLGL
Sbjct: 2 SGSISTIHPDIIETHVLSRLDASALASTSCVSSQLHSLIASNESLWTNICNSTWPSTDIPRLRHVISSFPNGPRSFFSDSFTNPDIAASSSPVNLDCPSGLISAVDIYYQHKPVLSKAVLTESFDTSPFRVDLLDPKDSVPTGVGQPVNEDLSRELGERLTLSWILIDPIGRRAMNLSSYKPLTVERRSLSTGEVHVRYGWVFNAGEKGSTTECVRCGISVTCEGSQNQSGEMHVTKVSLELEDMYGKQLSGKDSLVILRKGMAGKRGNVKGREEEGKRRNEDYREMRREKILSEVKKHQGRIDTLYMAFGALIFASLGL 321
BLAST of eg_v1.0.alternate_g24936.t1 vs. ExPASy TrEMBL
Match: V4SWR0|V4SWR0_CITCL (F-box domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10013808mg PE=4 SV=1) HSP 1 Score: 578.17 bits (1489), Expect = 0.000e+0 Identity = 280/291 (96.22%), Postives = 285/291 (97.94%), Query Frame = 0 Query: 4 MAASSLAATNTTSSSSGSISTIHPDIIETHILSRLDASALASTSCVSSQLHSLIASNESLWTNICNSTWPSIDIPRLRHVISSFPNGPRSFFSDSFTNPDIAASSSPVNLDCPSGLISAVDIYYQHKPILSKAVLTESFDTSPFRVDLLDPKDSVPTGVGQPVNEDLSRELGERLTLSWILIDPIGRRAMNLSSYKPVTVERRSLSTGEVHVRYGWVFNAGEKGSTTECVRCGISVTCEGSQNQSGEMHLTKLSLELEDMYGKQLSGEDSLVILRKGMAGKRGNVKGREEE 294
MA SSLAATNTTSS SGSISTIHPDIIETH+LSRLDASALASTSCVSSQLHSLIASNESLWTNICNSTWPS DIPRLRHVISSFPNGPRSFFSDSFTNPDIAASSSPVNLDCPSGLISAVDIYYQHK +LSKAVLTESFDTSPFRVDLLDPKDSVPTGVGQPVNEDLSR LGERLTLSWILIDPIGRRAMNLSSYKPVTVERRSLSTGEVHVRYGWVFNAGEKGSTTECVRCGISVTCEGSQNQSGEM +TK+SLELEDMYGKQLSG+DSLVILRKGMAGKRGNVKGREEE
Sbjct: 1 MATSSLAATNTTSSGSGSISTIHPDIIETHVLSRLDASALASTSCVSSQLHSLIASNESLWTNICNSTWPSTDIPRLRHVISSFPNGPRSFFSDSFTNPDIAASSSPVNLDCPSGLISAVDIYYQHKTVLSKAVLTESFDTSPFRVDLLDPKDSVPTGVGQPVNEDLSRVLGERLTLSWILIDPIGRRAMNLSSYKPVTVERRSLSTGEVHVRYGWVFNAGEKGSTTECVRCGISVTCEGSQNQSGEMQVTKVSLELEDMYGKQLSGKDSLVILRKGMAGKRGNVKGREEE 291
BLAST of eg_v1.0.alternate_g24936.t1 vs. ExPASy TrEMBL
Match: V4SRY8|V4SRY8_CITCL (Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10013482mg PE=4 SV=1) HSP 1 Score: 428.328 bits (1100), Expect = 8.604e-147 Identity = 224/341 (65.69%), Postives = 267/341 (78.30%), Query Frame = 0 Query: 3 DMAASSLAATNTTSSSSGSISTIHPDIIETHILSRLDASALASTSCVSSQLHSLIASNESLWTNICNSTWPSIDIPRLRHVISSFPNGPRSFFSDSFTNPDIAASSSPVNLDCPSGLISAVDIYYQHKPILSKAVLTESFDTSPFRVDLLDPKDSVPTGVGQPVNEDLSRELGERLTLSWILIDPIGRRAMNLSSYKPVT-VERRSLSTGEVHVRYGWVFNAGEKGSTTECVRCGISVTCEGSQNQSGEMHLTKLSLELEDMYGKQLSGEDSLVILRKGMAGKRGNVKGREEEGKRRNEDYRAMRREK-ILSEAKK---HQGRIDTLYMAFGALIFASLGL 338
DM SLA T SS SIS +HPDIIETHIL+RLD +ALAS SC SS+L+SL SNE+LWTNICNSTWPS + PRLRHVISSFP GPRSFFS +FTNPD+A SSSP+NLDCP GLISAVDI++Q + I SK V TE+ D+SPFRVDLL+ KD VPTG+ PVNE++ RE+ E L LSWILIDPIGRRAMN+SSYKPVT ERR LSTGEVH+RY WVF+AG++GS+ E V+CG++ T S +GEMH++K+SL LEDM+GK L+G+DSL IL KGM GKRG VKGREEEG+RR + Y+ MRR K IL E +K Q +DTL++AF IF L L
Sbjct: 29 DMDPPSLAGT-----SSSSISAVHPDIIETHILTRLDPTALASASCASSRLYSL-TSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMATSSSPMNLDCPPGLISAVDIHFQERHIFSKVVETETTDSSPFRVDLLETKDPVPTGIPHPVNEEMYREILEGLKLSWILIDPIGRRAMNVSSYKPVTAAERRWLSTGEVHLRYAWVFSAGQEGSSLEYVKCGVTATFSAS--HTGEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMMGKRGVVKGREEEGRRRYDAYKKMRRIKIILGEVRKPLNRQRTLDTLFLAFSVFIFVFLVL 361
BLAST of eg_v1.0.alternate_g24936.t1 vs. ExPASy TrEMBL
Match: A0A067FD03|A0A067FD03_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g019763mg PE=4 SV=1) HSP 1 Score: 424.861 bits (1091), Expect = 6.104e-146 Identity = 221/340 (65.00%), Postives = 265/340 (77.94%), Query Frame = 0 Query: 4 MAASSLAATNTTSSSSGSISTIHPDIIETHILSRLDASALASTSCVSSQLHSLIASNESLWTNICNSTWPSIDIPRLRHVISSFPNGPRSFFSDSFTNPDIAASSSPVNLDCPSGLISAVDIYYQHKPILSKAVLTESFDTSPFRVDLLDPKDSVPTGVGQPVNEDLSRELGERLTLSWILIDPIGRRAMNLSSYKPVT-VERRSLSTGEVHVRYGWVFNAGEKGSTTECVRCGISVTCEGSQNQSGEMHLTKLSLELEDMYGKQLSGEDSLVILRKGMAGKRGNVKGREEEGKRRNEDYRAMRREKIL----SEAKKHQGRIDTLYMAFGALIFASLGL 338
M SLA T SS SIS +HPDIIETHIL+RLD +ALAS SC SS+L+SL SNE+LWTNICNSTWPS + PRLRHVISSFP GPRSFFS +FTNPD+A SSS +NLDCP GLISAVDI++Q + I SK V TE+ D+SPFRVDLL+PKD VPTG+ PVNE++ +E+ E L LSWILIDPIGRRAMN+SSYKPVT ERR LSTGEVH+RY WVF+AG++GS+ E V+CG++ T S +GEMH++K+SL LEDM+GK L+G+DSL IL KGM GKRG VKGREEEG+RR + Y+ MRR KIL + K Q +DTL++AF IF L L
Sbjct: 1 MDPPSLAGT-----SSSSISAVHPDIIETHILTRLDPTALASASCASSRLYSL-TSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMATSSSSINLDCPPGLISAVDIHFQERHIFSKVVETETTDSSPFRVDLLEPKDPVPTGIPHPVNEEMYQEIREGLKLSWILIDPIGRRAMNMSSYKPVTAAERRWLSTGEVHLRYAWVFSAGQEGSSLEYVKCGVTATFSAS--HTGEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMMGKRGVVKGREEEGRRRYDAYKKMRRIKILLGEVRKPLKRQRTLDTLFLAFSVFIFVFLVL 332
BLAST of eg_v1.0.alternate_g24936.t1 vs. ExPASy TrEMBL
Match: A0A2H5MZW6|A0A2H5MZW6_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_006110 PE=4 SV=1) HSP 1 Score: 421.394 bits (1082), Expect = 2.512e-144 Identity = 219/339 (64.60%), Postives = 263/339 (77.58%), Query Frame = 0 Query: 3 DMAASSLAATNTTSSSSGSISTIHPDIIETHILSRLDASALASTSCVSSQLHSLIASNESLWTNICNSTWPSIDIPRLRHVISSFPNGPRSFFSDSFTNPDIAASSSPVNLDCPSGLISAVDIYYQHKPILSKAVLTESFDTSPFRVDLLDPKDSVPTGVGQPVNEDLSRELGERLTLSWILIDPIGRRAMNLSSYKPVT-VERRSLSTGEVHVRYGWVFNAGEKGSTTECVRCGISVTCEGSQNQSGEMHLTKLSLELEDMYGKQLSGEDSLVILRKGMAGKRGNVKGREEEGKRRNEDYRAMRREKIL----SEAKKHQGRIDTLYMAFGALIFASL 336
DM SLA T SS SIS +HPDIIETHIL+RLD +ALAS SC SS+L+SL SNE+LWTNICNSTWPS + PRLRHVISSFP GPRSFFS +FTNPD+A SSS +NLDCP GLISAVDI++Q + I SK V TE+ D+SPFRVDLL+PKD VPTG+ PVNE++ +E+ E L LSWILIDPIGRRAMN+SSYKPVT ERR LSTGEVH+RY WVF+AG++GS+ E V+CG++ T S +GEMH++K+SL LEDM+GK L+G+DSL IL KGM GKRG VKGREEEG+RR + Y+ MRR KIL + K Q +DTL++AF L
Sbjct: 2 DMDPPSLAGT-----SSSSISAVHPDIIETHILTRLDPTALASASCASSRLYSL-TSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMATSSSSINLDCPPGLISAVDIHFQERHIFSKVVETETTDSSPFRVDLLEPKDPVPTGIPHPVNEEMYQEIREGLKLSWILIDPIGRRAMNVSSYKPVTAAERRWLSTGEVHLRYAWVFSAGQEGSSLEYVKCGVTATFSAS--HTGEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMLGKRGVVKGREEEGRRRYDAYKKMRRIKILLGEVRKPLKRQRTLDTLFLAFSKSFLTKL 332
BLAST of eg_v1.0.alternate_g24936.t1 vs. ExPASy TrEMBL
Match: A0A067F167|A0A067F167_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g019412mg PE=4 SV=1) HSP 1 Score: 405.986 bits (1042), Expect = 2.536e-138 Identity = 213/334 (63.77%), Postives = 258/334 (77.25%), Query Frame = 0 Query: 9 LAATNTTSSSSGSISTIHPDIIETHILSRLDASALASTSCVSSQLHSLIASNESLWTNICNSTWPSIDIPRLRHVISSFPNGPRSFFSDSFTNPDIA---ASSSPVNLDCPSGLISAVDIYYQHKPILSKAVLTE--SFDTSPFRVDLLDPKDSVPTGVGQPVNEDLSRELGERLTLSWILIDPIGRRAMNLSSYKPVTVERRSLSTGEVHVRYGWVFNA--GEKGSTTECVRCGISVTCEGSQNQSGEMHLTKLSLELEDMYGKQLSGEDSLVILRKGMAGKRGNVKGREEEGKRRNEDYRAMRREKILSEAKKHQGRIDTLYMAFGALIFAS 335
+ + + ++S SI T+HPDI+ETH+ LDASALAS SC SSQL++L AS+E+LWT+I NSTWPS + P +R +ISSFP G RSFFSDSFTNPD++ SSSPVNLDCPS LISAVDI+YQ + + K V TE +FD+SPFR+D+LDPKDSVPT + PV+E + E GER TLSWILIDPI RRAMNLSSYKPV VERR +ST EVH+RY WVF A GE+GS TE V+ GISVT EG QSGEMH++K+SL LEDMYG QL+G +SL I++KG+A +RG VKGRE EGKRR E+Y MRRE+ILSE K R+D L +AF IFAS
Sbjct: 1 MDSPSVADTTSSSIWTVHPDIMETHVFKHLDASALASASCASSQLYAL-ASDETLWTDISNSTWPSTNTPGIRQLISSFPKGTRSFFSDSFTNPDVSITTPSSSPVNLDCPSRLISAVDIFYQQRHVFGKVVETEPLNFDSSPFRIDVLDPKDSVPTRIPHPVDEQMMCEFGERFTLSWILIDPIRRRAMNLSSYKPVIVERRWMSTEEVHMRYAWVFCAEPGEEGSATEYVKFGISVTWEGC--QSGEMHVSKVSLNLEDMYGNQLTGRESLAIIQKGLASRRGKVKGRESEGKRRYEEYMEMRRERILSEVSKQPERVDKLRVAFFLFIFAS 331
BLAST of eg_v1.0.alternate_g24936.t1 vs. ExPASy TrEMBL
Match: V4S7M7|V4S7M7_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10012130mg PE=4 SV=1) HSP 1 Score: 404.831 bits (1039), Expect = 7.561e-138 Identity = 211/334 (63.17%), Postives = 259/334 (77.54%), Query Frame = 0 Query: 9 LAATNTTSSSSGSISTIHPDIIETHILSRLDASALASTSCVSSQLHSLIASNESLWTNICNSTWPSIDIPRLRHVISSFPNGPRSFFSDSFTNPDIA---ASSSPVNLDCPSGLISAVDIYYQHKPILSKAVLTE--SFDTSPFRVDLLDPKDSVPTGVGQPVNEDLSRELGERLTLSWILIDPIGRRAMNLSSYKPVTVERRSLSTGEVHVRYGWVFNA--GEKGSTTECVRCGISVTCEGSQNQSGEMHLTKLSLELEDMYGKQLSGEDSLVILRKGMAGKRGNVKGREEEGKRRNEDYRAMRREKILSEAKKHQGRIDTLYMAFGALIFAS 335
+ + + ++S SI T+HPDI+ETH+ LDASALAS SC SSQL++L AS+E+LWT+I NSTWPS + P +R +ISSFP G RSFFSDSFTNPD++ SSSPVNLDCPS LISAVDI+YQ + + K V TE +FD+SPFR+D+LDPKDSVPT + PV+E + E GER TLSWILIDPI RRAMNLSSYKPV VERR +ST EVH+RY W+F A GE+GS TE V+ GISVT EG QSGEMH++K+SL+LEDMYG QL+G +SL I++KG+A +RG VKGRE EGKRR E+Y MRRE+ILSE K R+D L +AF +FAS
Sbjct: 1 MDSPSVADTTSSSIWTVHPDIMETHVFKHLDASALASASCASSQLYAL-ASDETLWTDISNSTWPSTNTPGIRQLISSFPKGTRSFFSDSFTNPDVSITTPSSSPVNLDCPSRLISAVDIFYQQRHVFGKVVETEPLNFDSSPFRIDVLDPKDSVPTRIPHPVDEQMMCEFGERFTLSWILIDPIRRRAMNLSSYKPVIVERRWMSTEEVHMRYAWIFCAGPGEEGSATEYVKFGISVTWEGC--QSGEMHVSKVSLDLEDMYGNQLTGRESLAIIQKGLASRRGKVKGRESEGKRRYEEYMEMRRERILSEVSKQPERVDKLRVAFFLFMFAS 331
BLAST of eg_v1.0.alternate_g24936.t1 vs. ExPASy TrEMBL
Match: A0A2H5MYU6|A0A2H5MYU6_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_006080 PE=4 SV=1) HSP 1 Score: 403.29 bits (1035), Expect = 2.656e-137 Identity = 212/334 (63.47%), Postives = 257/334 (76.95%), Query Frame = 0 Query: 9 LAATNTTSSSSGSISTIHPDIIETHILSRLDASALASTSCVSSQLHSLIASNESLWTNICNSTWPSIDIPRLRHVISSFPNGPRSFFSDSFTNPDIA---ASSSPVNLDCPSGLISAVDIYYQHKPILSKAVLTE--SFDTSPFRVDLLDPKDSVPTGVGQPVNEDLSRELGERLTLSWILIDPIGRRAMNLSSYKPVTVERRSLSTGEVHVRYGWVFNA--GEKGSTTECVRCGISVTCEGSQNQSGEMHLTKLSLELEDMYGKQLSGEDSLVILRKGMAGKRGNVKGREEEGKRRNEDYRAMRREKILSEAKKHQGRIDTLYMAFGALIFAS 335
+ + + ++S SI T+HPDI+ETH+ LDASALAS SC SSQL++L AS+E+LWT+I NSTWPS + P +R +ISSFP G RSFFSDSFTNPD++ SSSPVNLDCPS LISAVDI+YQ + + K V TE +FD+SPFR+D+LDPKDSVPT + PV+E + E GER TLSWILIDPI RRAMNLSSYKPV VERR +ST EVH+RY WVF A GE+GS TE V+ GISVT EG QSGEMH++K+SL LEDMYG QL+G +SL I++KG+A +RG VKGRE EGKRR E+Y RRE+ILSE K R+D L +AF IFAS
Sbjct: 1 MDSPSVADTTSSSIWTVHPDIMETHVFKHLDASALASASCASSQLYAL-ASDETLWTDISNSTWPSTNTPGIRQLISSFPKGTRSFFSDSFTNPDVSITTPSSSPVNLDCPSRLISAVDIFYQQRHVFGKVVETEPLNFDSSPFRIDVLDPKDSVPTRIPHPVDEQMMCEFGERFTLSWILIDPIRRRAMNLSSYKPVIVERRWMSTEEVHMRYAWVFCAEPGEEGSATEYVKFGISVTWEGC--QSGEMHVSKVSLNLEDMYGNQLTGRESLAIIQKGLASRRGKVKGRESEGKRRYEEYMEKRRERILSEVSKQPERVDKLRVAFFLFIFAS 331
BLAST of eg_v1.0.alternate_g24936.t1 vs. ExPASy TrEMBL
Match: V4SWF4|V4SWF4_CITCL (F-box domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10012142mg PE=4 SV=1) HSP 1 Score: 388.652 bits (997), Expect = 1.638e-131 Identity = 206/330 (62.42%), Postives = 253/330 (76.67%), Query Frame = 0 Query: 18 SSGSISTIHPDIIETHILSRLDASALASTSCVSSQLHSLIASNESLWTNICNSTWPSIDIPRLRHVISSFPNGPRSFFSDSFTNPD---IAASSSPVNLDCPSGLISAVDIYYQHKPILSKAVLTES----FDTSPFRVDLLDPKDSVPTGVGQPVNEDLSRELGERLTLSWILIDPIGRRAMNLSSYKPVTVERRSLSTGEVHVRYGWVFNAGEKGSTTECVRCGISVTCEGSQNQSGEMHLTKLSLELEDMYGKQLSGEDSLVILRKGMAGKRGNVKGREEEGKRRNEDYRAMRREKILSEAKKHQGRIDTLYMAFGALIFASLGLVV 340
++ IS +HPDIIETHIL+RLD LAS SCVSSQLHSL AS+ESLWTNIC+STWPS + PRLRHVISSFP GPRSFFSDSFTNPD + SSS +L+ PS +ISAVD+YY++K I S+ V TE+ F+ SPFRVDLLDPKDSVPT + P NED REL E LTLSWILIDPIGRRAMNLSSYKPVTV+R LS GE HVR+ V + G+KGS++E V+CGI VTC GSQ GEMH+ +++L++EDM G L+G+DSLVIL++G+ GKR NVKGRE+EGKR+ EDY ++ + + + +G +D L +AFG F S GL +
Sbjct: 11 NTARISAVHPDIIETHILTRLDGPTLASASCVSSQLHSL-ASDESLWTNICHSTWPSTNTPRLRHVISSFPYGPRSFFSDSFTNPDQTPASTSSSSPSLNRPSEIISAVDVYYKNKLIFSRVVETETASGWFNCSPFRVDLLDPKDSVPTRIPHPDNEDTCRELAEDLTLSWILIDPIGRRAMNLSSYKPVTVQRHWLS-GEAHVRFSLVLSGGDKGSSSEFVQCGIVVTCGGSQG--GEMHVREVNLQVEDMDGTNLNGKDSLVILQRGLEGKRRNVKGREDEGKRKYEDY-VEKKRERREKKLRTEGALDMLCVAFGVFTFFSSGLYL 335
BLAST of eg_v1.0.alternate_g24936.t1 vs. ExPASy TrEMBL
Match: V4UUY1|V4UUY1_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10012130mg PE=4 SV=1) HSP 1 Score: 386.726 bits (992), Expect = 3.091e-131 Identity = 202/313 (64.54%), Postives = 247/313 (78.91%), Query Frame = 0 Query: 9 LAATNTTSSSSGSISTIHPDIIETHILSRLDASALASTSCVSSQLHSLIASNESLWTNICNSTWPSIDIPRLRHVISSFPNGPRSFFSDSFTNPDIA---ASSSPVNLDCPSGLISAVDIYYQHKPILSKAVLTE--SFDTSPFRVDLLDPKDSVPTGVGQPVNEDLSRELGERLTLSWILIDPIGRRAMNLSSYKPVTVERRSLSTGEVHVRYGWVFNA--GEKGSTTECVRCGISVTCEGSQNQSGEMHLTKLSLELEDMYGKQLSGEDSLVILRKGMAGKRGNVKGREEEGKRRNEDYRAMRREKILSEA 314
+ + + ++S SI T+HPDI+ETH+ LDASALAS SC SSQL++L AS+E+LWT+I NSTWPS + P +R +ISSFP G RSFFSDSFTNPD++ SSSPVNLDCPS LISAVDI+YQ + + K V TE +FD+SPFR+D+LDPKDSVPT + PV+E + E GER TLSWILIDPI RRAMNLSSYKPV VERR +ST EVH+RY W+F A GE+GS TE V+ GISVT EG QSGEMH++K+SL+LEDMYG QL+G +SL I++KG+A +RG VKGRE EGKRR E+Y MRRE+ILSE
Sbjct: 1 MDSPSVADTTSSSIWTVHPDIMETHVFKHLDASALASASCASSQLYAL-ASDETLWTDISNSTWPSTNTPGIRQLISSFPKGTRSFFSDSFTNPDVSITTPSSSPVNLDCPSRLISAVDIFYQQRHVFGKVVETEPLNFDSSPFRIDVLDPKDSVPTRIPHPVDEQMMCEFGERFTLSWILIDPIRRRAMNLSSYKPVIVERRWMSTEEVHMRYAWIFCAGPGEEGSATEYVKFGISVTWEGC--QSGEMHVSKVSLDLEDMYGNQLTGRESLAIIQKGLASRRGKVKGRESEGKRRYEEYMEMRRERILSEG 310
BLAST of eg_v1.0.alternate_g24936.t1 vs. ExPASy Swiss-Prot
Match: FB322_ARATH (Probable F-box protein At2g36090 OS=Arabidopsis thaliana OX=3702 GN=At2g36090 PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 4.793e-73 Identity = 150/338 (44.38%), Postives = 205/338 (60.65%), Query Frame = 0 Query: 4 MAASSLAATNTTSSSSGSISTIHPDIIETHILSRLDASALASTSCVSSQLHSLIASNESLWTNICNSTWPSIDIPRLRHVISSFPNGPRSFFSDSFTNPDIAASSSPVNLDCPSGLISAVDIYYQHKPILSKAVLTES----FDTSPFRVDLLDPKDSVPTGVGQ-PVNEDLSRELGERLTLSWILIDPIGRRAMNLSSYKPVTVERRSLSTGEVHVRYGWVFNAGEKGSTTECVRCGISVTCEGSQNQSGEMHLTKLSLELEDMYGKQLSGEDSLVILRKGMAGKRGNVKGREEEGKRRNEDYRAMRREKILSEAKKHQGRIDTLYMAFGALIFASL 336
MA SS + +TT + IST+H DIIE+HIL+RLD + LAS SC SS LH L ASNE LW+ IC STWPS G RSFFSD+++ + A + S ++ P LISAVD++Y+ K I S+ V TE+ F +SP R+DL+D KD+V T + + ED R+L + LTLSWI+IDPIG+RA N+SS++PV+V+R +S GEV ++ V A V C I+V G + EMH+ ++SL++E M G L+G DSLVILR M GKR N RE E K+R+E++ +RE + + + D L +AFG L F L
Sbjct: 1 MANSSSFSPSTTVTDL--ISTVHDDIIESHILTRLDGATLASVSCASSHLHHL-ASNEILWSKICRSTWPSC------------SGGSRSFFSDAYSMVETAGTVSDLDRPFPE-LISAVDLHYRGKLIFSRVVKTETTTAWFKSSPLRIDLVDTKDTVATPIKRRQRTEDTCRDLEKDLTLSWIVIDPIGKRAANISSHRPVSVQRNWIS-GEVEAQFATVVGA---------VECVITVVTCGEE----EMHVREVSLKVEKMEGTHLNGRDSLVILRSVMEGKRVNGSRREVESKKRHEEFMEKKREMKEKKMRV-ESVFDILTVAFGILGFVLL 307
BLAST of eg_v1.0.alternate_g24936.t1 vs. ExPASy Swiss-Prot
Match: FB119_ARATH (F-box protein At2g27310 OS=Arabidopsis thaliana OX=3702 GN=At2g27310 PE=2 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 1.076e-64 Identity = 133/326 (40.80%), Postives = 190/326 (58.28%), Query Frame = 0 Query: 21 SISTIHPDIIETHILSRLDASALASTSCVSSQLHSLIASNESLWTNICNSTWPSIDIPRLRHVISSFPNGPRSFFSDSFTNPDIAASSSPVNLDCPSGLISAVDIYYQHKPILSKAVLTES-------FDTSPFRVDLLDPKDSVPTGVGQPVN--EDLSRELGERLTLSWILIDPIGRRAMNLSSYKPVTVERRSLSTGEVHVRYGWVFNAGEKGSTTECVRCGISVTC-EGSQNQSGEMHLTKLSLELEDMYGKQLSGEDSLVILRKGMAGKRGNVKGREEEGKRRNEDYRAMRREKILSEAKKHQGRIDTLYMAFGALIFASL 336
SIST+H DII+T IL+RLD LAST+ SS L +L + E LW + TWPSI+ PR+ ISSFP+G RSFF+DS+ P + D P+GLISAVD+YY+ + I SK E+ F +SPFRVD+LDPK+SV T + P E +++ E + L+WILIDPI +RA N+SS K V+ RR+ TG++ +R+ E V CG + E + GE+H+ + L++ED+ GK + G DSLVIL+ + GKR E K R E+Y M+ + ++ ++ + + DT+ M FG +F L
Sbjct: 11 SISTLHSDIIQTQILTRLDGPTLASTATTSSYLQTL-CTEEKLWQELSIDTWPSINDPRVVQAISSFPSGYRSFFADSY--PFTEHTWQSEKHDPPTGLISAVDLYYRGEIIYSKVQEMETEKGKSGWFLSSPFRVDILDPKESVQTRIRYPGGDYEAWVKDMEESMKLNWILIDPIKKRAANISSRKAVSA-RRNWLTGDLEIRFS-TVVTAEAAEVAAVVSCGSAEAWKEVDEEVGGEIHVRDVRLQVEDIEGKCMKGRDSLVILQGLLDGKRSCKDDEERRAKERYEEYVRMKIQWRENKERREKAQ-DTICMIFGFSMFVLL 330
BLAST of eg_v1.0.alternate_g24936.t1 vs. ExPASy Swiss-Prot
Match: FB346_ARATH (F-box protein At3g44326 OS=Arabidopsis thaliana OX=3702 GN=At3g44326 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 7.713e-60 Identity = 134/344 (38.95%), Postives = 200/344 (58.14%), Query Frame = 0 Query: 19 SGSISTIHPDIIETHILSRLDASALASTSCVSSQLHSLIASNESLWTNICNSTWPSIDIPRLRHVISSFPNGPRSFFSDS--FTNPDIAASSSPVNLDCPSGLISAVDIYYQHKPILSKAVLTES----FDTSPFRVDLLDPKDSVPTGV---GQPVNEDLSRELGERLTLSWILIDPIGRRAMNLSSYKPVTVERRSLSTGEVHVRYGWVFNAGEKGSTTECVRCGISVTC---EGSQNQSGEMHLTKLSLELEDMYGKQLSGEDSLVILRKGMAGKRGNVKGREEEGKRRNEDYRAMRREKILSEAKKHQGRIDTLYMAFGALIFASLG-LVVSRIFMSLSL 349
S I+ + D++ ++IL+RLD S+LA+ SC S L+S S+ESLW C++TWPS R++ +IS+FP+G R+FFSDS F D+ + P ++D S LISAVDI+Y+ I S+ +TE+ F SP RVDL++PK+ +PT V Q ++ +L E L+LSWILIDP +RA ++S+ KPV+V R L TGEVHV++ +F G K +E V ++V + ++ M + ++SL ED G+ L G+ SL IL M KR G EEEGK + +Y M R+ +E K +G+ + A + LG L+ +FM +L
Sbjct: 18 SPGINAVSSDVLRSNILTRLDGSSLAALSCTCSNLNSF-CSDESLWRQQCSATWPSTSDTRVQSIISTFPDGHRTFFSDSFPFLEHDVGINLPP-SVD-TSELISAVDIFYKDDVIFSRVHVTETVSGWFLCSPMRVDLVEPKELIPTRVLVTDQCKDDTWKSDLEENLSLSWILIDPTCKRAADVSTRKPVSVHRHWL-TGEVHVKFSSIFVVGNK-KRSEQVEFTVTVVLAVFNRREEETAVMQIREVSLVAEDKDGRNLGGKVSLEILVAAMGMKRRFRAGGEEEGKEKYIEY--MERKTAKAEMKWRRGKETAMETAACWIAVLLLGFLLCFYLFMHKNL 354
BLAST of eg_v1.0.alternate_g24936.t1 vs. Araport11
Match: AT2G36090.1 (| F-box family protein | Chr2:15158631-15159584 FORWARD LENGTH=317 | 201606) HSP 1 Score: 232.261 bits (591), Expect = 4.903e-74 Identity = 150/338 (44.38%), Postives = 205/338 (60.65%), Query Frame = 0 Query: 4 MAASSLAATNTTSSSSGSISTIHPDIIETHILSRLDASALASTSCVSSQLHSLIASNESLWTNICNSTWPSIDIPRLRHVISSFPNGPRSFFSDSFTNPDIAASSSPVNLDCPSGLISAVDIYYQHKPILSKAVLTES----FDTSPFRVDLLDPKDSVPTGVGQ-PVNEDLSRELGERLTLSWILIDPIGRRAMNLSSYKPVTVERRSLSTGEVHVRYGWVFNAGEKGSTTECVRCGISVTCEGSQNQSGEMHLTKLSLELEDMYGKQLSGEDSLVILRKGMAGKRGNVKGREEEGKRRNEDYRAMRREKILSEAKKHQGRIDTLYMAFGALIFASL 336
MA SS + +TT + IST+H DIIE+HIL+RLD + LAS SC SS LH L ASNE LW+ IC STWPS G RSFFSD+++ + A + S ++ P LISAVD++Y+ K I S+ V TE+ F +SP R+DL+D KD+V T + + ED R+L + LTLSWI+IDPIG+RA N+SS++PV+V+R +S GEV ++ V A V C I+V G + EMH+ ++SL++E M G L+G DSLVILR M GKR N RE E K+R+E++ +RE + + + D L +AFG L F L
Sbjct: 1 MANSSSFSPSTTVTDL--ISTVHDDIIESHILTRLDGATLASVSCASSHLHHL-ASNEILWSKICRSTWPSC------------SGGSRSFFSDAYSMVETAGTVSDLDRPFPE-LISAVDLHYRGKLIFSRVVKTETTTAWFKSSPLRIDLVDTKDTVATPIKRRQRTEDTCRDLEKDLTLSWIVIDPIGKRAANISSHRPVSVQRNWIS-GEVEAQFATVVGA---------VECVITVVTCGEE----EMHVREVSLKVEKMEGTHLNGRDSLVILRSVMEGKRVNGSRREVESKKRHEEFMEKKREMKEKKMRV-ESVFDILTVAFGILGFVLL 307
BLAST of eg_v1.0.alternate_g24936.t1 vs. Araport11
Match: AT2G27310.1 (| F-box family protein | Chr2:11683954-11684967 REVERSE LENGTH=337 | 201606) HSP 1 Score: 211.46 bits (537), Expect = 1.101e-65 Identity = 133/326 (40.80%), Postives = 190/326 (58.28%), Query Frame = 0 Query: 21 SISTIHPDIIETHILSRLDASALASTSCVSSQLHSLIASNESLWTNICNSTWPSIDIPRLRHVISSFPNGPRSFFSDSFTNPDIAASSSPVNLDCPSGLISAVDIYYQHKPILSKAVLTES-------FDTSPFRVDLLDPKDSVPTGVGQPVN--EDLSRELGERLTLSWILIDPIGRRAMNLSSYKPVTVERRSLSTGEVHVRYGWVFNAGEKGSTTECVRCGISVTC-EGSQNQSGEMHLTKLSLELEDMYGKQLSGEDSLVILRKGMAGKRGNVKGREEEGKRRNEDYRAMRREKILSEAKKHQGRIDTLYMAFGALIFASL 336
SIST+H DII+T IL+RLD LAST+ SS L +L + E LW + TWPSI+ PR+ ISSFP+G RSFF+DS+ P + D P+GLISAVD+YY+ + I SK E+ F +SPFRVD+LDPK+SV T + P E +++ E + L+WILIDPI +RA N+SS K V+ RR+ TG++ +R+ E V CG + E + GE+H+ + L++ED+ GK + G DSLVIL+ + GKR E K R E+Y M+ + ++ ++ + + DT+ M FG +F L
Sbjct: 11 SISTLHSDIIQTQILTRLDGPTLASTATTSSYLQTL-CTEEKLWQELSIDTWPSINDPRVVQAISSFPSGYRSFFADSY--PFTEHTWQSEKHDPPTGLISAVDLYYRGEIIYSKVQEMETEKGKSGWFLSSPFRVDILDPKESVQTRIRYPGGDYEAWVKDMEESMKLNWILIDPIKKRAANISSRKAVSA-RRNWLTGDLEIRFS-TVVTAEAAEVAAVVSCGSAEAWKEVDEEVGGEIHVRDVRLQVEDIEGKCMKGRDSLVILQGLLDGKRSCKDDEERRAKERYEEYVRMKIQWRENKERREKAQ-DTICMIFGFSMFVLL 330
BLAST of eg_v1.0.alternate_g24936.t1 vs. Araport11
Match: AT3G44326.1 (| F-box family protein | Chr3:16000933-16002024 REVERSE LENGTH=363 | 201606) HSP 1 Score: 199.519 bits (506), Expect = 7.891e-61 Identity = 134/344 (38.95%), Postives = 200/344 (58.14%), Query Frame = 0 Query: 19 SGSISTIHPDIIETHILSRLDASALASTSCVSSQLHSLIASNESLWTNICNSTWPSIDIPRLRHVISSFPNGPRSFFSDS--FTNPDIAASSSPVNLDCPSGLISAVDIYYQHKPILSKAVLTES----FDTSPFRVDLLDPKDSVPTGV---GQPVNEDLSRELGERLTLSWILIDPIGRRAMNLSSYKPVTVERRSLSTGEVHVRYGWVFNAGEKGSTTECVRCGISVTC---EGSQNQSGEMHLTKLSLELEDMYGKQLSGEDSLVILRKGMAGKRGNVKGREEEGKRRNEDYRAMRREKILSEAKKHQGRIDTLYMAFGALIFASLG-LVVSRIFMSLSL 349
S I+ + D++ ++IL+RLD S+LA+ SC S L+S S+ESLW C++TWPS R++ +IS+FP+G R+FFSDS F D+ + P ++D S LISAVDI+Y+ I S+ +TE+ F SP RVDL++PK+ +PT V Q ++ +L E L+LSWILIDP +RA ++S+ KPV+V R L TGEVHV++ +F G K +E V ++V + ++ M + ++SL ED G+ L G+ SL IL M KR G EEEGK + +Y M R+ +E K +G+ + A + LG L+ +FM +L
Sbjct: 18 SPGINAVSSDVLRSNILTRLDGSSLAALSCTCSNLNSF-CSDESLWRQQCSATWPSTSDTRVQSIISTFPDGHRTFFSDSFPFLEHDVGINLPP-SVD-TSELISAVDIFYKDDVIFSRVHVTETVSGWFLCSPMRVDLVEPKELIPTRVLVTDQCKDDTWKSDLEENLSLSWILIDPTCKRAADVSTRKPVSVHRHWL-TGEVHVKFSSIFVVGNK-KRSEQVEFTVTVVLAVFNRREEETAVMQIREVSLVAEDKDGRNLGGKVSLEILVAAMGMKRRFRAGGEEEGKEKYIEY--MERKTAKAEMKWRRGKETAMETAACWIAVLLLGFLLCFYLFMHKNL 354 The following BLAST results are available for this feature:
BLAST of eg_v1.0.alternate_g24936.t1 vs. ExPASy TrEMBL
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of eg_v1.0.alternate_g24936.t1 vs. ExPASy Swiss-Prot
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs UniProt Swissprot) Total hits: 3 Position : 0 Zoom : x 1
BLAST of eg_v1.0.alternate_g24936.t1 vs. Araport11
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs Araport11) Total hits: 3 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus glauca CRC3463 v1.0 v1.0 proteins
Date Performed: 2024-01-20 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >eg_v1.0.alternate_g24936.t1-ucr_v1 ID=eg_v1.0.alternate_g24936.t1-ucr_v1; Name=eg_v1.0.alternate_g24936.t1; organism=Citrus glauca; type=mRNA; length=1050bpback to top protein sequence of eg_v1.0.alternate_g24936.t1-ucr_v1 >eg_v1.0.alternate_g24936.t1-ucr_v1 ID=eg_v1.0.alternate_g24936.t1-ucr_v1; Name=eg_v1.0.alternate_g24936.t1-ucr_v1; organism=Citrus glauca; type=polypeptide; length=349bpback to top mRNA from alignment at Alt_Scaffold_6:26360450..26361499+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=1050bp; location=Sequence derived from: Alt_Scaffold_6:26360450..26361499+ (Citrus glaucaback to top Coding sequence (CDS) from alignment at Alt_Scaffold_6:26360450..26361499+ >eg_v1.0.alternate_g24936.t1-ucr_v1 ID=eg_v1.0.alternate_g24936.t1-ucr_v1; Name=eg_v1.0.alternate_g24936.t1; organism=Citrus glauca; type=CDS; length=1050bp; location=Sequence derived from: Alt_Scaffold_6:26360450..26361499+ (Citrus glaucaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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