eg_v1.0.alternate_g24938.t2
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of eg_v1.0.alternate_g24938.t2 vs. ExPASy TrEMBL
Match: A0A2H5MZW6|A0A2H5MZW6_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_006110 PE=4 SV=1) HSP 1 Score: 620.928 bits (1600), Expect = 0.000e+0 Identity = 303/326 (92.94%), Postives = 309/326 (94.79%), Query Frame = 0 Query: 1 MDMDPPSLAGTSSSSIFSVHPDIIETHVLTRLDPTALASASCTSSRLYSLTSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMATSSSPISLDCPPGLISAVDIHFQERHIFSKVVETETTDSSPFRVDLLEPKDPVPTGIPHPVNEEMYQEIREGLKLSWILIDPIGRRAMNVSSYKPVTAAERRWLSTGEVHLRYAWVVSAGQEGSTLEYVKCGVTATFSASHTGEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMMGKRGVVKGREEEGRRRYDAYKKMRRIKILLGELTY-LTRTTPCQPGFLPRSK 325 MDMDPPSLAGTSSSSI +VHPDIIETH+LTRLDPTALASASC SSRLYSLTSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMATSSS I+LDCPPGLISAVDIHFQERHIFSKVVETETTDSSPFRVDLLEPKDPVPTGIPHPVNEEMYQEIREGLKLSWILIDPIGRRAMNVSSYKPVTAAERRWLSTGEVHLRYAWV SAGQEGS+LEYVKCGVTATFSASHTGEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGM+GKRGVVKGREEEGRRRYDAYKKMRRIKILLGE+ L R FL SK Sbjct: 1 MDMDPPSLAGTSSSSISAVHPDIIETHILTRLDPTALASASCASSRLYSLTSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMATSSSSINLDCPPGLISAVDIHFQERHIFSKVVETETTDSSPFRVDLLEPKDPVPTGIPHPVNEEMYQEIREGLKLSWILIDPIGRRAMNVSSYKPVTAAERRWLSTGEVHLRYAWVFSAGQEGSSLEYVKCGVTATFSASHTGEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMLGKRGVVKGREEEGRRRYDAYKKMRRIKILLGEVRKPLKRQRTLDTLFLAFSK 326
BLAST of eg_v1.0.alternate_g24938.t2 vs. ExPASy TrEMBL
Match: A0A067FD03|A0A067FD03_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g019763mg PE=4 SV=1) HSP 1 Score: 614.379 bits (1583), Expect = 0.000e+0 Identity = 295/305 (96.72%), Postives = 301/305 (98.69%), Query Frame = 0 Query: 3 MDPPSLAGTSSSSIFSVHPDIIETHVLTRLDPTALASASCTSSRLYSLTSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMATSSSPISLDCPPGLISAVDIHFQERHIFSKVVETETTDSSPFRVDLLEPKDPVPTGIPHPVNEEMYQEIREGLKLSWILIDPIGRRAMNVSSYKPVTAAERRWLSTGEVHLRYAWVVSAGQEGSTLEYVKCGVTATFSASHTGEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMMGKRGVVKGREEEGRRRYDAYKKMRRIKILLGEL 307 MDPPSLAGTSSSSI +VHPDIIETH+LTRLDPTALASASC SSRLYSLTSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMATSSS I+LDCPPGLISAVDIHFQERHIFSKVVETETTDSSPFRVDLLEPKDPVPTGIPHPVNEEMYQEIREGLKLSWILIDPIGRRAMN+SSYKPVTAAERRWLSTGEVHLRYAWV SAGQEGS+LEYVKCGVTATFSASHTGEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMMGKRGVVKGREEEGRRRYDAYKKMRRIKILLGE+ Sbjct: 1 MDPPSLAGTSSSSISAVHPDIIETHILTRLDPTALASASCASSRLYSLTSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMATSSSSINLDCPPGLISAVDIHFQERHIFSKVVETETTDSSPFRVDLLEPKDPVPTGIPHPVNEEMYQEIREGLKLSWILIDPIGRRAMNMSSYKPVTAAERRWLSTGEVHLRYAWVFSAGQEGSSLEYVKCGVTATFSASHTGEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMMGKRGVVKGREEEGRRRYDAYKKMRRIKILLGEV 305
BLAST of eg_v1.0.alternate_g24938.t2 vs. ExPASy TrEMBL
Match: V4SRY8|V4SRY8_CITCL (Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10013482mg PE=4 SV=1) HSP 1 Score: 595.89 bits (1535), Expect = 0.000e+0 Identity = 294/307 (95.77%), Postives = 302/307 (98.37%), Query Frame = 0 Query: 1 MDMDPPSLAGTSSSSIFSVHPDIIETHVLTRLDPTALASASCTSSRLYSLTSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMATSSSPISLDCPPGLISAVDIHFQERHIFSKVVETETTDSSPFRVDLLEPKDPVPTGIPHPVNEEMYQEIREGLKLSWILIDPIGRRAMNVSSYKPVTAAERRWLSTGEVHLRYAWVVSAGQEGSTLEYVKCGVTATFSASHTGEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMMGKRGVVKGREEEGRRRYDAYKKMRRIKILLGEL 307 MDMDPPSLAGTSSSSI +VHPDIIETH+LTRLDPTALASASC SSRLYSLTSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMATSSSP++LDCPPGLISAVDIHFQERHIFSKVVETETTDSSPFRVDLLE KDPVPTGIPHPVNEEMY+EI EGLKLSWILIDPIGRRAMNVSSYKPVTAAERRWLSTGEVHLRYAWV SAGQEGS+LEYVKCGVTATFSASHTGEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMMGKRGVVKGREEEGRRRYDAYKKMRRIKI+LGE+ Sbjct: 28 MDMDPPSLAGTSSSSISAVHPDIIETHILTRLDPTALASASCASSRLYSLTSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMATSSSPMNLDCPPGLISAVDIHFQERHIFSKVVETETTDSSPFRVDLLETKDPVPTGIPHPVNEEMYREILEGLKLSWILIDPIGRRAMNVSSYKPVTAAERRWLSTGEVHLRYAWVFSAGQEGSSLEYVKCGVTATFSASHTGEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMMGKRGVVKGREEEGRRRYDAYKKMRRIKIILGEV 334
BLAST of eg_v1.0.alternate_g24938.t2 vs. ExPASy TrEMBL
Match: A0A2H5MYU4|A0A2H5MYU4_CITUN (F-box domain-containing protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_006090 PE=4 SV=1) HSP 1 Score: 422.935 bits (1086), Expect = 5.547e-145 Identity = 205/294 (69.73%), Postives = 247/294 (84.01%), Query Frame = 0 Query: 13 SSSIFSVHPDIIETHVLTRLDPTALASASCTSSRLYSL-TSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMATSSSPISLDCPPGLISAVDIHFQERHIFSKVVETETTDSSPFRVDLLEPKDPVPTGIPHPVNEEMYQEIREGLKLSWILIDPIGRRAMNVSSYKPVTAAERRWLSTGEVHLRYAWVVSAGQEGSTLEYVKCGVTATF--SASHTGEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMMGKRGVVKGREEEGRRRYDAYKKMRRIKIL 303 S SI ++HPDIIETHVL+RLD +ALAS SC SS+L+SL SNE+LWTNICNSTWPST+ PRLRHVISSFP GPRSFFS +FTNPD+A SSSP++LDCP GLISAVDI++Q + + SK V TE+ D+SPFRVDLL+PKD VPTG+ PVNE++ +E+ E L LSWILIDPIGRRAMN+SSYKP+T ERR LSTGEVH+RY WV +AG++GST E V+CG++ T S + +GEMHV+KVSL LEDM+GK L+GKDSL IL KGM GKRG VKGREEEG+RR + Y++MRR KIL Sbjct: 2 SGSISTIHPDIIETHVLSRLDASALASTSCVSSQLHSLIASNESLWTNICNSTWPSTDIPRLRHVISSFPNGPRSFFSDSFTNPDIAASSSPVNLDCPSGLISAVDIYYQHKPVLSKAVLTESFDTSPFRVDLLDPKDSVPTGVGQPVNEDLSRELGERLTLSWILIDPIGRRAMNLSSYKPLT-VERRSLSTGEVHVRYGWVFNAGEKGSTTECVRCGISVTCEGSQNQSGEMHVTKVSLELEDMYGKQLSGKDSLVILRKGMAGKRGNVKGREEEGKRRNEDYREMRREKIL 294
BLAST of eg_v1.0.alternate_g24938.t2 vs. ExPASy TrEMBL
Match: V4SWR0|V4SWR0_CITCL (F-box domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10013808mg PE=4 SV=1) HSP 1 Score: 394.43 bits (1012), Expect = 3.075e-134 Identity = 191/270 (70.74%), Postives = 226/270 (83.70%), Query Frame = 0 Query: 20 HPDIIETHVLTRLDPTALASASCTSSRLYSL-TSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMATSSSPISLDCPPGLISAVDIHFQERHIFSKVVETETTDSSPFRVDLLEPKDPVPTGIPHPVNEEMYQEIREGLKLSWILIDPIGRRAMNVSSYKPVTAAERRWLSTGEVHLRYAWVVSAGQEGSTLEYVKCGVTATF--SASHTGEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMMGKRGVVKGREEE 286 HPDIIETHVL+RLD +ALAS SC SS+L+SL SNE+LWTNICNSTWPST+ PRLRHVISSFP GPRSFFS +FTNPD+A SSSP++LDCP GLISAVDI++Q + + SK V TE+ D+SPFRVDLL+PKD VPTG+ PVNE++ + + E L LSWILIDPIGRRAMN+SSYKPVT ERR LSTGEVH+RY WV +AG++GST E V+CG++ T S + +GEM V+KVSL LEDM+GK L+GKDSL IL KGM GKRG VKGREEE Sbjct: 23 HPDIIETHVLSRLDASALASTSCVSSQLHSLIASNESLWTNICNSTWPSTDIPRLRHVISSFPNGPRSFFSDSFTNPDIAASSSPVNLDCPSGLISAVDIYYQHKTVLSKAVLTESFDTSPFRVDLLDPKDSVPTGVGQPVNEDLSRVLGERLTLSWILIDPIGRRAMNLSSYKPVT-VERRSLSTGEVHVRYGWVFNAGEKGSTTECVRCGISVTCEGSQNQSGEMQVTKVSLELEDMYGKQLSGKDSLVILRKGMAGKRGNVKGREEE 291
BLAST of eg_v1.0.alternate_g24938.t2 vs. ExPASy TrEMBL
Match: A0A067F167|A0A067F167_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g019412mg PE=4 SV=1) HSP 1 Score: 390.578 bits (1002), Expect = 5.902e-132 Identity = 201/308 (65.26%), Postives = 245/308 (79.55%), Query Frame = 0 Query: 3 MDPPSLAGTSSSSIFSVHPDIIETHVLTRLDPTALASASCTSSRLYSLTSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMAT---SSSPISLDCPPGLISAVDIHFQERHIFSKVVETE--TTDSSPFRVDLLEPKDPVPTGIPHPVNEEMYQEIREGLKLSWILIDPIGRRAMNVSSYKPVTAAERRWLSTGEVHLRYAWVVSA--GQEGSTLEYVKCGVTATFSASHTGEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMMGKRGVVKGREEEGRRRYDAYKKMRRIKIL 303 MD PS+A T+SSSI++VHPDI+ETHV LD +ALASASC SS+LY+L S+ETLWT+I NSTWPSTN P +R +ISSFPKG RSFFS +FTNPD++ SSSP++LDCP LISAVDI +Q+RH+F KVVETE DSSPFR+D+L+PKD VPT IPHPV+E+M E E LSWILIDPI RRAMN+SSYKPV ERRW+ST EVH+RYAWV A G+EGS EYVK G++ T+ +GEMHVSKVSL+LEDM+G L G++SLAI+ KG+ +RG VKGRE EG+RRY+ Y +MRR +IL Sbjct: 1 MDSPSVADTTSSSIWTVHPDIMETHVFKHLDASALASASCASSQLYALASDETLWTDISNSTWPSTNTPGIRQLISSFPKGTRSFFSDSFTNPDVSITTPSSSPVNLDCPSRLISAVDIFYQQRHVFGKVVETEPLNFDSSPFRIDVLDPKDSVPTRIPHPVDEQMMCEFGERFTLSWILIDPIRRRAMNLSSYKPVI-VERRWMSTEEVHMRYAWVFCAEPGEEGSATEYVKFGISVTWEGCQSGEMHVSKVSLNLEDMYGNQLTGRESLAIIQKGLASRRGKVKGRESEGKRRYEEYMEMRRERIL 307
BLAST of eg_v1.0.alternate_g24938.t2 vs. ExPASy TrEMBL
Match: V4UUY1|V4UUY1_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10012130mg PE=4 SV=1) HSP 1 Score: 387.882 bits (995), Expect = 2.402e-131 Identity = 200/308 (64.94%), Postives = 244/308 (79.22%), Query Frame = 0 Query: 3 MDPPSLAGTSSSSIFSVHPDIIETHVLTRLDPTALASASCTSSRLYSLTSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMAT---SSSPISLDCPPGLISAVDIHFQERHIFSKVVETE--TTDSSPFRVDLLEPKDPVPTGIPHPVNEEMYQEIREGLKLSWILIDPIGRRAMNVSSYKPVTAAERRWLSTGEVHLRYAWVVSA--GQEGSTLEYVKCGVTATFSASHTGEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMMGKRGVVKGREEEGRRRYDAYKKMRRIKIL 303 MD PS+A T+SSSI++VHPDI+ETHV LD +ALASASC SS+LY+L S+ETLWT+I NSTWPSTN P +R +ISSFPKG RSFFS +FTNPD++ SSSP++LDCP LISAVDI +Q+RH+F KVVETE DSSPFR+D+L+PKD VPT IPHPV+E+M E E LSWILIDPI RRAMN+SSYKPV ERRW+ST EVH+RYAW+ A G+EGS EYVK G++ T+ +GEMHVSKVSL LEDM+G L G++SLAI+ KG+ +RG VKGRE EG+RRY+ Y +MRR +IL Sbjct: 1 MDSPSVADTTSSSIWTVHPDIMETHVFKHLDASALASASCASSQLYALASDETLWTDISNSTWPSTNTPGIRQLISSFPKGTRSFFSDSFTNPDVSITTPSSSPVNLDCPSRLISAVDIFYQQRHVFGKVVETEPLNFDSSPFRIDVLDPKDSVPTRIPHPVDEQMMCEFGERFTLSWILIDPIRRRAMNLSSYKPVI-VERRWMSTEEVHMRYAWIFCAGPGEEGSATEYVKFGISVTWEGCQSGEMHVSKVSLDLEDMYGNQLTGRESLAIIQKGLASRRGKVKGRESEGKRRYEEYMEMRRERIL 307
BLAST of eg_v1.0.alternate_g24938.t2 vs. ExPASy TrEMBL
Match: V4S7M7|V4S7M7_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10012130mg PE=4 SV=1) HSP 1 Score: 389.037 bits (998), Expect = 2.662e-131 Identity = 200/308 (64.94%), Postives = 244/308 (79.22%), Query Frame = 0 Query: 3 MDPPSLAGTSSSSIFSVHPDIIETHVLTRLDPTALASASCTSSRLYSLTSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMAT---SSSPISLDCPPGLISAVDIHFQERHIFSKVVETE--TTDSSPFRVDLLEPKDPVPTGIPHPVNEEMYQEIREGLKLSWILIDPIGRRAMNVSSYKPVTAAERRWLSTGEVHLRYAWVVSA--GQEGSTLEYVKCGVTATFSASHTGEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMMGKRGVVKGREEEGRRRYDAYKKMRRIKIL 303 MD PS+A T+SSSI++VHPDI+ETHV LD +ALASASC SS+LY+L S+ETLWT+I NSTWPSTN P +R +ISSFPKG RSFFS +FTNPD++ SSSP++LDCP LISAVDI +Q+RH+F KVVETE DSSPFR+D+L+PKD VPT IPHPV+E+M E E LSWILIDPI RRAMN+SSYKPV ERRW+ST EVH+RYAW+ A G+EGS EYVK G++ T+ +GEMHVSKVSL LEDM+G L G++SLAI+ KG+ +RG VKGRE EG+RRY+ Y +MRR +IL Sbjct: 1 MDSPSVADTTSSSIWTVHPDIMETHVFKHLDASALASASCASSQLYALASDETLWTDISNSTWPSTNTPGIRQLISSFPKGTRSFFSDSFTNPDVSITTPSSSPVNLDCPSRLISAVDIFYQQRHVFGKVVETEPLNFDSSPFRIDVLDPKDSVPTRIPHPVDEQMMCEFGERFTLSWILIDPIRRRAMNLSSYKPVI-VERRWMSTEEVHMRYAWIFCAGPGEEGSATEYVKFGISVTWEGCQSGEMHVSKVSLDLEDMYGNQLTGRESLAIIQKGLASRRGKVKGRESEGKRRYEEYMEMRRERIL 307
BLAST of eg_v1.0.alternate_g24938.t2 vs. ExPASy TrEMBL
Match: A0A2H5MYU6|A0A2H5MYU6_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_006080 PE=4 SV=1) HSP 1 Score: 387.497 bits (994), Expect = 8.748e-131 Identity = 200/308 (64.94%), Postives = 244/308 (79.22%), Query Frame = 0 Query: 3 MDPPSLAGTSSSSIFSVHPDIIETHVLTRLDPTALASASCTSSRLYSLTSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMAT---SSSPISLDCPPGLISAVDIHFQERHIFSKVVETE--TTDSSPFRVDLLEPKDPVPTGIPHPVNEEMYQEIREGLKLSWILIDPIGRRAMNVSSYKPVTAAERRWLSTGEVHLRYAWVVSA--GQEGSTLEYVKCGVTATFSASHTGEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMMGKRGVVKGREEEGRRRYDAYKKMRRIKIL 303 MD PS+A T+SSSI++VHPDI+ETHV LD +ALASASC SS+LY+L S+ETLWT+I NSTWPSTN P +R +ISSFPKG RSFFS +FTNPD++ SSSP++LDCP LISAVDI +Q+RH+F KVVETE DSSPFR+D+L+PKD VPT IPHPV+E+M E E LSWILIDPI RRAMN+SSYKPV ERRW+ST EVH+RYAWV A G+EGS EYVK G++ T+ +GEMHVSKVSL+LEDM+G L G++SLAI+ KG+ +RG VKGRE EG+RRY+ Y + RR +IL Sbjct: 1 MDSPSVADTTSSSIWTVHPDIMETHVFKHLDASALASASCASSQLYALASDETLWTDISNSTWPSTNTPGIRQLISSFPKGTRSFFSDSFTNPDVSITTPSSSPVNLDCPSRLISAVDIFYQQRHVFGKVVETEPLNFDSSPFRIDVLDPKDSVPTRIPHPVDEQMMCEFGERFTLSWILIDPIRRRAMNLSSYKPVI-VERRWMSTEEVHMRYAWVFCAEPGEEGSATEYVKFGISVTWEGCQSGEMHVSKVSLNLEDMYGNQLTGRESLAIIQKGLASRRGKVKGRESEGKRRYEEYMEKRRERIL 307
BLAST of eg_v1.0.alternate_g24938.t2 vs. ExPASy TrEMBL
Match: A0A067FCB2|A0A067FCB2_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g040393mg PE=4 SV=1) HSP 1 Score: 367.851 bits (943), Expect = 3.328e-123 Identity = 191/305 (62.62%), Postives = 228/305 (74.75%), Query Frame = 0 Query: 3 MDPPSLAGTS--SSSIFSVHPDIIETHVLTRLDPTALASASCTSSRLYSLTSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMATSSSPISLDCPPGLISAVDIHFQERHIFSKVVETETTDSSPFRVDLLEPKDPVPTGIPHPVNEEMYQEIREGLKLSWILIDPIGRRAMNVSSYKPVTAAERRWLSTGEVHLRYAWVVSAGQEGSTLEYVKCGVTATFSASHTGEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMMGKRGVVKGREEEGRRRYDAYKKMRRIKILLG 305 MDPPS A T+ SSSIF+VHPDI++THVLTRLD +ALASASC SS+LYSLTS ETLWTNICNSTWPSTN PRLR VISSFPKG RSFFS + TNPD AT SS ++LD P LISAVDI++Q+RHIF KVV+TET + SPFR+DLL+P+D VPTG+ P NE E+ E +LSWILIDPIGRRAMN+SS KPVT R++ TG+V +RYA V S G++ E+V C + S +GEM V KV L LED K L+GKD L L KGM+GKR +V+GREEE +RRY + KM K+ L Sbjct: 1 MDPPSPADTAPASSSIFTVHPDIMKTHVLTRLDASALASASCVSSQLYSLTSYETLWTNICNSTWPSTNTPRLRRVISSFPKGARSFFSDSITNPDNATPSS-LNLDLPLELISAVDIYYQDRHIFGKVVKTETFEGSPFRIDLLDPQDSVPTGLNQPFNEGEGSELSEYFRLSWILIDPIGRRAMNLSSCKPVTVESWRFM-TGKVRMRYACVFSTGED----EFVHCEIMVKCKGSQSGEMRVRKVRLLLEDTCEKQLSGKDGLVTLLKGMVGKRVIVRGREEEAKRRYKTHLKMSMEKMQLA 299
BLAST of eg_v1.0.alternate_g24938.t2 vs. ExPASy Swiss-Prot
Match: FB322_ARATH (Probable F-box protein At2g36090 OS=Arabidopsis thaliana OX=3702 GN=At2g36090 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.607e-67 Identity = 133/290 (45.86%), Postives = 178/290 (61.38%), Query Frame = 0 Query: 11 TSSSSIFSVHPDIIETHVLTRLDPTALASASCTSSRLYSLTSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMATSSSPISLDCP-PGLISAVDIHFQERHIFSKVVETETT----DSSPFRVDLLEPKDPVPTGIP-HPVNEEMYQEIREGLKLSWILIDPIGRRAMNVSSYKPVTAAERRWLSTGEVHLRYAWVVSAGQEGSTLEYVKCGVTATFSASHTGEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMMGKRGVVKGREEEGRRRYDAY 294 T + I +VH DIIE+H+LTRLD LAS SC SS L+ L SNE LW+ IC STWPS + G RSFFS A++ + A + S LD P P LISAVD+H++ + IFS+VV+TETT SSP R+DL++ KD V T I E+ +++ + L LSWI+IDPIG+RA N+SS++PV + +R W+S GEV ++A VV A + + V CG EMHV +VSL +E M G HLNG+DSL IL M GKR RE E ++R++ + Sbjct: 12 TVTDLISTVHDDIIESHILTRLDGATLASVSCASSHLHHLASNEILWSKICRSTWPSCS------------GGSRSFFSDAYSMVETAGTVS--DLDRPFPELISAVDLHYRGKLIFSRVVKTETTTAWFKSSPLRIDLVDTKDTVATPIKRRQRTEDTCRDLEKDLTLSWIVIDPIGKRAANISSHRPV-SVQRNWIS-GEVEAQFATVVGAVE--CVITVVTCG---------EEEMHVREVSLKVEKMEGTHLNGRDSLVILRSVMEGKRVNGSRREVESKKRHEEF 274
BLAST of eg_v1.0.alternate_g24938.t2 vs. ExPASy Swiss-Prot
Match: FB119_ARATH (F-box protein At2g27310 OS=Arabidopsis thaliana OX=3702 GN=At2g27310 PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 2.736e-62 Identity = 124/296 (41.89%), Postives = 171/296 (57.77%), Query Frame = 0 Query: 15 SIFSVHPDIIETHVLTRLDPTALASASCTSSRLYSLTSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMATSSSPISLDCPPGLISAVDIHFQERHIFSKVVETETTD-------SSPFRVDLLEPKDPVPTGIPHPVN--EEMYQEIREGLKLSWILIDPIGRRAMNVSSYKPVTAAERRWLSTGEVHLRYAWVVSAGQEGSTLEYVKCGVTATFSASHT---GEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMMGKRGVVKGREEEGRRRYDAYKKMR 298 SI ++H DII+T +LTRLD LAS + TSS L +L + E LW + TWPS N PR+ ISSFP G RSFF+ ++ + S D P GLISAVD++++ I+SKV E ET SSPFRVD+L+PK+ V T I +P E +++ E +KL+WILIDPI +RA N+SS K V+ A R WL TG++ +R++ V + V CG + GE+HV V L +ED+ GK + G+DSL IL + GKR E + RY+ Y +M+ Sbjct: 11 SISTLHSDIIQTQILTRLDGPTLASTATTSSYLQTLCTEEKLWQELSIDTWPSINDPRVVQAISSFPSGYRSFFADSYPFTEHTWQSE--KHDPPTGLISAVDLYYRGEIIYSKVQEMETEKGKSGWFLSSPFRVDILDPKESVQTRIRYPGGDYEAWVKDMEESMKLNWILIDPIKKRAANISSRKAVS-ARRNWL-TGDLEIRFS-TVVTAEAAEVAAVVSCGSAEAWKEVDEEVGGEIHVRDVRLQVEDIEGKCMKGRDSLVILQGLLDGKRSCKDDEERRAKERYEEYVRMK 301
BLAST of eg_v1.0.alternate_g24938.t2 vs. ExPASy Swiss-Prot
Match: FB346_ARATH (F-box protein At3g44326 OS=Arabidopsis thaliana OX=3702 GN=At3g44326 PE=2 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 3.654e-60 Identity = 126/315 (40.00%), Postives = 185/315 (58.73%), Query Frame = 0 Query: 3 MDPPSLAGTSSSSIFSVHPDIIETHVLTRLDPTALASASCTSSRLYSLTSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMATSSSPISLDCPPG-----LISAVDIHFQERHIFSKVVETETTD----SSPFRVDLLEPKDPVPTGI---PHPVNEEMYQEIREGLKLSWILIDPIGRRAMNVSSYKPVTAAERRWLSTGEVHLRYA--WVVSAGQEGSTLEYVKCGVTATFS--ASHTGEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMMGKRGVVKGREEEGRRRYDAYKKMRRIK 301 ++ PS G S I +V D++ +++LTRLD ++LA+ SCT S L S S+E+LW C++TWPST+ R++ +IS+FP G R+FFS +F P + + ++ PP LISAVDI +++ IFS+V TET SP RVDL+EPK+ +PT + ++ ++ E L LSWILIDP +RA +VS+ KPV+ R WL TGEVH++++ +VV + +E+ V A F+ T M + +VSL ED G++L GK SL IL M KR G EEEG+ +Y Y + + K Sbjct: 10 VEQPSRGG--SPGINAVSSDVLRSNILTRLDGSSLAALSCTCSNLNSFCSDESLWRQQCSATWPSTSDTRVQSIISTFPDGHRTFFSDSF--PFL---EHDVGINLPPSVDTSELISAVDIFYKDDVIFSRVHVTETVSGWFLCSPMRVDLVEPKELIPTRVLVTDQCKDDTWKSDLEENLSLSWILIDPTCKRAADVSTRKPVS-VHRHWL-TGEVHVKFSSIFVVGNKKRSEQVEFTVTVVLAVFNRREEETAVMQIREVSLVAEDKDGRNLGGKVSLEILVAAMGMKRRFRAGGEEEGKEKYIEYMERKTAK 315
BLAST of eg_v1.0.alternate_g24938.t2 vs. Araport11
Match: AT2G36090.1 (| F-box family protein | Chr2:15158631-15159584 FORWARD LENGTH=317 | 201606) HSP 1 Score: 218.394 bits (555), Expect = 2.667e-68 Identity = 133/290 (45.86%), Postives = 178/290 (61.38%), Query Frame = 0 Query: 11 TSSSSIFSVHPDIIETHVLTRLDPTALASASCTSSRLYSLTSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMATSSSPISLDCP-PGLISAVDIHFQERHIFSKVVETETT----DSSPFRVDLLEPKDPVPTGIP-HPVNEEMYQEIREGLKLSWILIDPIGRRAMNVSSYKPVTAAERRWLSTGEVHLRYAWVVSAGQEGSTLEYVKCGVTATFSASHTGEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMMGKRGVVKGREEEGRRRYDAY 294 T + I +VH DIIE+H+LTRLD LAS SC SS L+ L SNE LW+ IC STWPS + G RSFFS A++ + A + S LD P P LISAVD+H++ + IFS+VV+TETT SSP R+DL++ KD V T I E+ +++ + L LSWI+IDPIG+RA N+SS++PV + +R W+S GEV ++A VV A + + V CG EMHV +VSL +E M G HLNG+DSL IL M GKR RE E ++R++ + Sbjct: 12 TVTDLISTVHDDIIESHILTRLDGATLASVSCASSHLHHLASNEILWSKICRSTWPSCS------------GGSRSFFSDAYSMVETAGTVS--DLDRPFPELISAVDLHYRGKLIFSRVVKTETTTAWFKSSPLRIDLVDTKDTVATPIKRRQRTEDTCRDLEKDLTLSWIVIDPIGKRAANISSHRPV-SVQRNWIS-GEVEAQFATVVGAVE--CVITVVTCG---------EEEMHVREVSLKVEKMEGTHLNGRDSLVILRSVMEGKRVNGSRREVESKKRHEEF 274
BLAST of eg_v1.0.alternate_g24938.t2 vs. Araport11
Match: AT2G27310.1 (| F-box family protein | Chr2:11683954-11684967 REVERSE LENGTH=337 | 201606) HSP 1 Score: 206.068 bits (523), Expect = 2.799e-63 Identity = 124/296 (41.89%), Postives = 171/296 (57.77%), Query Frame = 0 Query: 15 SIFSVHPDIIETHVLTRLDPTALASASCTSSRLYSLTSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMATSSSPISLDCPPGLISAVDIHFQERHIFSKVVETETTD-------SSPFRVDLLEPKDPVPTGIPHPVN--EEMYQEIREGLKLSWILIDPIGRRAMNVSSYKPVTAAERRWLSTGEVHLRYAWVVSAGQEGSTLEYVKCGVTATFSASHT---GEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMMGKRGVVKGREEEGRRRYDAYKKMR 298 SI ++H DII+T +LTRLD LAS + TSS L +L + E LW + TWPS N PR+ ISSFP G RSFF+ ++ + S D P GLISAVD++++ I+SKV E ET SSPFRVD+L+PK+ V T I +P E +++ E +KL+WILIDPI +RA N+SS K V+ A R WL TG++ +R++ V + V CG + GE+HV V L +ED+ GK + G+DSL IL + GKR E + RY+ Y +M+ Sbjct: 11 SISTLHSDIIQTQILTRLDGPTLASTATTSSYLQTLCTEEKLWQELSIDTWPSINDPRVVQAISSFPSGYRSFFADSYPFTEHTWQSE--KHDPPTGLISAVDLYYRGEIIYSKVQEMETEKGKSGWFLSSPFRVDILDPKESVQTRIRYPGGDYEAWVKDMEESMKLNWILIDPIKKRAANISSRKAVS-ARRNWL-TGDLEIRFS-TVVTAEAAEVAAVVSCGSAEAWKEVDEEVGGEIHVRDVRLQVEDIEGKCMKGRDSLVILQGLLDGKRSCKDDEERRAKERYEEYVRMK 301
BLAST of eg_v1.0.alternate_g24938.t2 vs. Araport11
Match: AT3G44326.1 (| F-box family protein | Chr3:16000933-16002024 REVERSE LENGTH=363 | 201606) HSP 1 Score: 201.06 bits (510), Expect = 3.738e-61 Identity = 126/315 (40.00%), Postives = 185/315 (58.73%), Query Frame = 0 Query: 3 MDPPSLAGTSSSSIFSVHPDIIETHVLTRLDPTALASASCTSSRLYSLTSNETLWTNICNSTWPSTNHPRLRHVISSFPKGPRSFFSHAFTNPDMATSSSPISLDCPPG-----LISAVDIHFQERHIFSKVVETETTD----SSPFRVDLLEPKDPVPTGI---PHPVNEEMYQEIREGLKLSWILIDPIGRRAMNVSSYKPVTAAERRWLSTGEVHLRYA--WVVSAGQEGSTLEYVKCGVTATFS--ASHTGEMHVSKVSLHLEDMFGKHLNGKDSLAILHKGMMGKRGVVKGREEEGRRRYDAYKKMRRIK 301 ++ PS G S I +V D++ +++LTRLD ++LA+ SCT S L S S+E+LW C++TWPST+ R++ +IS+FP G R+FFS +F P + + ++ PP LISAVDI +++ IFS+V TET SP RVDL+EPK+ +PT + ++ ++ E L LSWILIDP +RA +VS+ KPV+ R WL TGEVH++++ +VV + +E+ V A F+ T M + +VSL ED G++L GK SL IL M KR G EEEG+ +Y Y + + K Sbjct: 10 VEQPSRGG--SPGINAVSSDVLRSNILTRLDGSSLAALSCTCSNLNSFCSDESLWRQQCSATWPSTSDTRVQSIISTFPDGHRTFFSDSF--PFL---EHDVGINLPPSVDTSELISAVDIFYKDDVIFSRVHVTETVSGWFLCSPMRVDLVEPKELIPTRVLVTDQCKDDTWKSDLEENLSLSWILIDPTCKRAADVSTRKPVS-VHRHWL-TGEVHVKFSSIFVVGNKKRSEQVEFTVTVVLAVFNRREEETAVMQIREVSLVAEDKDGRNLGGKVSLEILVAAMGMKRRFRAGGEEEGKEKYIEYMERKTAK 315 The following BLAST results are available for this feature:
BLAST of eg_v1.0.alternate_g24938.t2 vs. ExPASy TrEMBL
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of eg_v1.0.alternate_g24938.t2 vs. ExPASy Swiss-Prot
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs UniProt Swissprot) Total hits: 3 Position : 0 Zoom : x 1
BLAST of eg_v1.0.alternate_g24938.t2 vs. Araport11
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs Araport11) Total hits: 3 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus glauca CRC3463 v1.0 v1.0 proteins
Date Performed: 2024-01-20 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >eg_v1.0.alternate_g24938.t2-ucr_v1 ID=eg_v1.0.alternate_g24938.t2-ucr_v1; Name=eg_v1.0.alternate_g24938.t2; organism=Citrus glauca; type=mRNA; length=1113bpback to top protein sequence of eg_v1.0.alternate_g24938.t2-ucr_v1 >eg_v1.0.alternate_g24938.t2-ucr_v1 ID=eg_v1.0.alternate_g24938.t2-ucr_v1; Name=eg_v1.0.alternate_g24938.t2-ucr_v1; organism=Citrus glauca; type=polypeptide; length=370bpback to top mRNA from alignment at Alt_Scaffold_6:26373040..26376944+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=3905bp; location=Sequence derived from: Alt_Scaffold_6:26373040..26376944+ (Citrus glaucaback to top Coding sequence (CDS) from alignment at Alt_Scaffold_6:26373040..26376944+ >eg_v1.0.alternate_g24938.t2-ucr_v1 ID=eg_v1.0.alternate_g24938.t2-ucr_v1; Name=eg_v1.0.alternate_g24938.t2; organism=Citrus glauca; type=CDS; length=1113bp; location=Sequence derived from: Alt_Scaffold_6:26373040..26376944+ (Citrus glaucaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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