eg_v1.0.alternate_g25369.t1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of eg_v1.0.alternate_g25369.t1 vs. ExPASy TrEMBL
Match: A0A2H5MZ72|A0A2H5MZ72_CITUN (Phytosulfokine-beta OS=Citrus unshiu OX=55188 GN=CUMW_006430 PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.463e-63 Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 0 Query: 1 MKKQSVNNVFLHSLLFALLLLSYSKSISARPLAQNQGEMVVKADGITHISTFKGVKQDLVHPMGSEECSENDEECLKRRMTAEAHLDYIYTQHHKP 96
MKKQSVNNVFL+SLLFALLLLSYSKSISARP AQNQGEMVVKADGITHISTFKGVKQDLV+PMGSEECSENDEECLKRRMTAEAHLDYIYTQHHKP
Sbjct: 1 MKKQSVNNVFLNSLLFALLLLSYSKSISARPFAQNQGEMVVKADGITHISTFKGVKQDLVNPMGSEECSENDEECLKRRMTAEAHLDYIYTQHHKP 96
BLAST of eg_v1.0.alternate_g25369.t1 vs. ExPASy TrEMBL
Match: V4UV20|V4UV20_CITCL (Phytosulfokine-beta OS=Citrus clementina OX=85681 GN=CICLE_v10013197mg PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.463e-63 Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 0 Query: 1 MKKQSVNNVFLHSLLFALLLLSYSKSISARPLAQNQGEMVVKADGITHISTFKGVKQDLVHPMGSEECSENDEECLKRRMTAEAHLDYIYTQHHKP 96
MKKQSVNNVFL+SLLFALLLLSYSKSISARP AQNQGEMVVKADGITHISTFKGVKQDLV+PMGSEECSENDEECLKRRMTAEAHLDYIYTQHHKP
Sbjct: 1 MKKQSVNNVFLNSLLFALLLLSYSKSISARPFAQNQGEMVVKADGITHISTFKGVKQDLVNPMGSEECSENDEECLKRRMTAEAHLDYIYTQHHKP 96
BLAST of eg_v1.0.alternate_g25369.t1 vs. ExPASy TrEMBL
Match: A0A067FC42|A0A067FC42_CITSI (Phytosulfokine-beta OS=Citrus sinensis OX=2711 GN=CISIN_1g034398mg PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 1.463e-63 Identity = 93/96 (96.88%), Postives = 95/96 (98.96%), Query Frame = 0 Query: 1 MKKQSVNNVFLHSLLFALLLLSYSKSISARPLAQNQGEMVVKADGITHISTFKGVKQDLVHPMGSEECSENDEECLKRRMTAEAHLDYIYTQHHKP 96
MKKQSVNNVFL+SLLFALLLLSYSKSISARP AQNQGEMVVKADGITHISTFKGVKQDLV+PMGSEECSENDEECLKRRMTAEAHLDYIYTQHHKP
Sbjct: 1 MKKQSVNNVFLNSLLFALLLLSYSKSISARPFAQNQGEMVVKADGITHISTFKGVKQDLVNPMGSEECSENDEECLKRRMTAEAHLDYIYTQHHKP 96
BLAST of eg_v1.0.alternate_g25369.t1 vs. ExPASy TrEMBL
Match: A0A6P5YSW6|A0A6P5YSW6_DURZI (Phytosulfokine-beta OS=Durio zibethinus OX=66656 GN=LOC111294258 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.975e-27 Identity = 57/97 (58.76%), Postives = 64/97 (65.98%), Query Frame = 0 Query: 1 MKKQSVNNVFLHSLLFALLLLSYSKSISARPLAQNQGEMVVKADGITHISTFKGVKQDLVHPMGS-EECSENDEECLKRRMTAEAHLDYIYTQHHKP 96
MK++ V F+ LLFA LL SYS AR L Q QGE KA+G+ F K+D + MGS EEC E DEECLKRRM AEAHLDYIYTQHHKP
Sbjct: 3 MKRKIVG--FITFLLFAFLLCSYS--TPARLLPQKQGEKQFKANGMIQAGLFTDAKEDFSNLMGSSEECYEKDEECLKRRMIAEAHLDYIYTQHHKP 95
BLAST of eg_v1.0.alternate_g25369.t1 vs. ExPASy TrEMBL
Match: A0A6J1AQT4|A0A6J1AQT4_9ROSI (Phytosulfokine-beta OS=Herrania umbratica OX=108875 GN=LOC110420543 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.382e-26 Identity = 55/84 (65.48%), Postives = 59/84 (70.24%), Query Frame = 0 Query: 14 LLFALLLLSYSKSISARPLAQNQGEMVVKADGITHISTFK-GVKQDLVHPMGSEECSENDEECLKRRMTAEAHLDYIYTQHHKP 96
LLFA LL SYS SAR LAQ QGE +KA+ I VK+D + MGSEEC E DEECLKRRM AEAHLDYIYTQHHKP
Sbjct: 12 LLFAFLLCSYS--TSARLLAQKQGEKELKANQINQAGLLATDVKEDFSNLMGSEECYEKDEECLKRRMIAEAHLDYIYTQHHKP 93
BLAST of eg_v1.0.alternate_g25369.t1 vs. ExPASy TrEMBL
Match: D7TJ24|D7TJ24_VITVI (Phytosulfokine-beta OS=Vitis vinifera OX=29760 GN=VIT_08s0007g03870 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.449e-26 Identity = 57/96 (59.38%), Postives = 66/96 (68.75%), Query Frame = 0 Query: 1 MKKQSVNNVFLHSLLFALLLLSYSKSISARPLAQNQGEMVVKADGITHISTFKGVKQDLVHPMGSEECSENDEECLKRRMTAEAHLDYIYTQHHKP 96
MK+ S VF+ LF LL SYS S AR LA Q E VV + +TH T KG +D+++ MG E+C ENDEECLKRRM AEAHLDYIYTQHHKP
Sbjct: 1 MKQNSW--VFIIFTLFLFLLYSYSGS--ARLLATKQDEQVVMGEWMTHAGTSKG--EDVLNLMGLEKCHENDEECLKRRMVAEAHLDYIYTQHHKP 90
BLAST of eg_v1.0.alternate_g25369.t1 vs. ExPASy TrEMBL
Match: A0A061ESV9|A0A061ESV9_THECC (Phytosulfokine-beta OS=Theobroma cacao OX=3641 GN=TCM_022449 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.676e-26 Identity = 54/84 (64.29%), Postives = 59/84 (70.24%), Query Frame = 0 Query: 14 LLFALLLLSYSKSISARPLAQNQGEMVVKADGITHISTFK-GVKQDLVHPMGSEECSENDEECLKRRMTAEAHLDYIYTQHHKP 96
LLFA LL SYS SAR LAQ QGE +KA+ I +K+D + MGSEEC E DEECLKRRM AEAHLDYIYTQHHKP
Sbjct: 12 LLFAFLLCSYS--TSARLLAQKQGEKELKANQINQAGLLTTDMKEDFSNLMGSEECHEKDEECLKRRMIAEAHLDYIYTQHHKP 93
BLAST of eg_v1.0.alternate_g25369.t1 vs. ExPASy TrEMBL
Match: A0A5B7B6E5|A0A5B7B6E5_DAVIN (Phytosulfokine-beta (Fragment) OS=Davidia involucrata OX=16924 GN=Din_033327 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.509e-24 Identity = 51/97 (52.58%), Postives = 68/97 (70.10%), Query Frame = 0 Query: 2 KKQSVNNVFLHSLLFALLLLSYSKSIS-ARPLAQNQGEMVVKADGITHISTFKGVKQ-DLVHPMGSEECSENDEECLKRRMTAEAHLDYIYTQHHKP 96
K +++ + SL+F +LL +S S + R L+ +QGE VKA+GITH + +K+ DL MG EEC++ DEECLKRR+ AEAHLDYIYTQHHKP
Sbjct: 10 KSEAMKQISYFSLIFIFVLLLFSHSTTCTRLLSPHQGEQKVKANGITHSGSSIKIKEYDLFTLMGLEECADKDEECLKRRVVAEAHLDYIYTQHHKP 106
BLAST of eg_v1.0.alternate_g25369.t1 vs. ExPASy TrEMBL
Match: A0A5B7B4R0|A0A5B7B4R0_DAVIN (Phytosulfokine-beta (Fragment) OS=Davidia involucrata OX=16924 GN=Din_033328 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.775e-22 Identity = 51/95 (53.68%), Postives = 66/95 (69.47%), Query Frame = 0 Query: 4 QSVNNVFLHSLLFALLLLSYSKSIS-ARPLAQNQGEMVVKADGITHI-STFKGVKQDLVHPMGSEECSENDEECLKRRMTAEAHLDYIYTQHHKP 96
+++ + SL+F +LL +S S + AR L QGE VKA+GI H S+ K + DL + MG EEC+E DE+CLKRR+ AEAHLDYIYTQHHKP
Sbjct: 14 EAMKQISFVSLIFIFVLLLFSPSTTCARLLPPYQGE--VKANGIIHADSSIKIKEDDLFNLMGLEECAEKDEDCLKRRVVAEAHLDYIYTQHHKP 106
BLAST of eg_v1.0.alternate_g25369.t1 vs. ExPASy TrEMBL
Match: A0A6A3BK49|A0A6A3BK49_HIBSY (Phytosulfokine-beta OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110065pilonHSYRG00217 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.652e-22 Identity = 48/96 (50.00%), Postives = 63/96 (65.62%), Query Frame = 0 Query: 1 MKKQSVNNVFLHSLLFALLLLSYSKSISARPLAQNQGEMVVKADGITHISTFKGVKQDLVHPMGSEECSENDEECLKRRMTAEAHLDYIYTQHHKP 96
MK++S+ +V LLF LL+ S + R L Q QGE V + GI + K+D+ + MGSE+C+E DEEC++RR AEAHLDYIYTQHHKP
Sbjct: 1 MKEKSIGSVTF--LLFVLLVCSSA----FRLLPQKQGENEVASKGIIRPALVTDTKEDISNLMGSEDCNEKDEECIRRRAIAEAHLDYIYTQHHKP 90
BLAST of eg_v1.0.alternate_g25369.t1 vs. ExPASy Swiss-Prot
Match: PSK6_ARATH (Putative phytosulfokines 6 OS=Arabidopsis thaliana OX=3702 GN=PSK6 PE=2 SV=2) HSP 1 Score: 65.4698 bits (158), Expect = 2.228e-14 Identity = 39/84 (46.43%), Postives = 48/84 (57.14%), Query Frame = 0 Query: 13 SLLFALLLLSYSKSISARPLAQNQGEMVVKADGITHISTFKGVKQDLVHP-MGSEECSENDEECLKRRMTAEAHLDYIYTQHHK 95
SL A+L L S S SA + E I + + V++D V+ MG E C E DEECL+RRM E+HLDYIYTQHHK
Sbjct: 4 SLCLAVLFLILSTSSSAIRRGKEDQE-------INPLVSATSVEEDSVNKLMGMEYCGEGDEECLRRRMMTESHLDYIYTQHHK 80
BLAST of eg_v1.0.alternate_g25369.t1 vs. Araport11
Match: AT3G44735.2 (| PHYTOSULFOKINE 3 PRECURSOR | Chr3:16291388-16292118 REVERSE LENGTH=81 | 201606) HSP 1 Score: 65.4698 bits (158), Expect = 2.279e-15 Identity = 39/84 (46.43%), Postives = 48/84 (57.14%), Query Frame = 0 Query: 13 SLLFALLLLSYSKSISARPLAQNQGEMVVKADGITHISTFKGVKQDLVHP-MGSEECSENDEECLKRRMTAEAHLDYIYTQHHK 95
SL A+L L S S SA + E I + + V++D V+ MG E C E DEECL+RRM E+HLDYIYTQHHK
Sbjct: 4 SLCLAVLFLILSTSSSAIRRGKEDQE-------INPLVSATSVEEDSVNKLMGMEYCGEGDEECLRRRMMTESHLDYIYTQHHK 80
BLAST of eg_v1.0.alternate_g25369.t1 vs. Araport11
Match: AT3G44735.1 (| PHYTOSULFOKINE 3 PRECURSOR | Chr3:16291388-16292118 REVERSE LENGTH=81 | 201606) HSP 1 Score: 65.4698 bits (158), Expect = 2.279e-15 Identity = 39/84 (46.43%), Postives = 48/84 (57.14%), Query Frame = 0 Query: 13 SLLFALLLLSYSKSISARPLAQNQGEMVVKADGITHISTFKGVKQDLVHP-MGSEECSENDEECLKRRMTAEAHLDYIYTQHHK 95
SL A+L L S S SA + E I + + V++D V+ MG E C E DEECL+RRM E+HLDYIYTQHHK
Sbjct: 4 SLCLAVLFLILSTSSSAIRRGKEDQE-------INPLVSATSVEEDSVNKLMGMEYCGEGDEECLRRRMMTESHLDYIYTQHHK 80 The following BLAST results are available for this feature:
BLAST of eg_v1.0.alternate_g25369.t1 vs. ExPASy TrEMBL
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of eg_v1.0.alternate_g25369.t1 vs. ExPASy Swiss-Prot
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs UniProt Swissprot) Total hits: 1 Position : 0 Zoom : x 1
BLAST of eg_v1.0.alternate_g25369.t1 vs. Araport11
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs Araport11) Total hits: 2 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus glauca CRC3463 v1.0 v1.0 proteins
Date Performed: 2024-01-20 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >eg_v1.0.alternate_g25369.t1-ucr_v1 ID=eg_v1.0.alternate_g25369.t1-ucr_v1; Name=eg_v1.0.alternate_g25369.t1; organism=Citrus glauca; type=mRNA; length=291bpback to top protein sequence of eg_v1.0.alternate_g25369.t1-ucr_v1 >eg_v1.0.alternate_g25369.t1-ucr_v1 ID=eg_v1.0.alternate_g25369.t1-ucr_v1; Name=eg_v1.0.alternate_g25369.t1-ucr_v1; organism=Citrus glauca; type=polypeptide; length=96bpback to top mRNA from alignment at Alt_Scaffold_6:29226458..29226974+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=517bp; location=Sequence derived from: Alt_Scaffold_6:29226458..29226974+ (Citrus glaucaback to top Coding sequence (CDS) from alignment at Alt_Scaffold_6:29226458..29226974+ >eg_v1.0.alternate_g25369.t1-ucr_v1 ID=eg_v1.0.alternate_g25369.t1-ucr_v1; Name=eg_v1.0.alternate_g25369.t1; organism=Citrus glauca; type=CDS; length=291bp; location=Sequence derived from: Alt_Scaffold_6:29226458..29226974+ (Citrus glaucaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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