eg_v1.0.alternate_g25580.t1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of eg_v1.0.alternate_g25580.t1 vs. ExPASy TrEMBL
Match: A0A2H5NUF9|A0A2H5NUF9_CITUN (AMPK1_CBM domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_077010 PE=4 SV=1) HSP 1 Score: 486.493 bits (1251), Expect = 3.010e-172 Identity = 245/262 (93.51%), Postives = 253/262 (96.56%), Query Frame = 0 Query: 1 MEIRTARGCLDKTVSYFSRNLSELGWKNARKISYPVAAAWNLRTSYQKFAHEHIVSARIRRHHRRSCLLWRAYSMPVSVAEDRAEDAEDDSEDSPQRIRSQPLSNDELVSLLADSERKKLMIKLGEANQQNRFLKRQLHIKEDSLVNFKSELAVMELEIQALVSLAEEIAQSGIPEGSRKINGKFIQSHLLSRLEAVHEKLKEQIKDVIAAQSKEVPLFWCGVAQSVQVMGTFDGWSQGEHLSPEYNDSFTKFSTTLMLRPG 262 MEI TARGCLDKTVSYFSRNLSELGWKNARK+SYPVAAAWNLRTSYQK AHEHIVSARIRRHHRRS LLWRAYSMPVSVA DRAEDAEDDS+DSPQRI SQPLSNDEL+SLLADS+RKKLM KL EANQQNRFLKRQLHIKED+LV+FKSELAVMELE+QALVSLAEEIAQSGIPEGSRKINGKFIQSHLLSRLEAVHEKLKEQIKDVIA QSKEVPLFWCG+AQSVQVMGTFDGWSQGEHLSPEYN SFTKFSTTLMLRPG Sbjct: 1 MEIGTARGCLDKTVSYFSRNLSELGWKNARKVSYPVAAAWNLRTSYQKLAHEHIVSARIRRHHRRSRLLWRAYSMPVSVAADRAEDAEDDSKDSPQRILSQPLSNDELMSLLADSQRKKLMTKLSEANQQNRFLKRQLHIKEDALVDFKSELAVMELEMQALVSLAEEIAQSGIPEGSRKINGKFIQSHLLSRLEAVHEKLKEQIKDVIAVQSKEVPLFWCGMAQSVQVMGTFDGWSQGEHLSPEYNGSFTKFSTTLMLRPG 262
BLAST of eg_v1.0.alternate_g25580.t1 vs. ExPASy TrEMBL
Match: V4UVX6|V4UVX6_CITCL (AMPK1_CBM domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10012334mg PE=4 SV=1) HSP 1 Score: 478.019 bits (1229), Expect = 6.917e-169 Identity = 246/262 (93.89%), Postives = 250/262 (95.42%), Query Frame = 0 Query: 1 MEIRTARGCLDKTVSYFSRNLSELGWKNARKISYPVAAAWNLRTSYQKFAHEHIVSARIRRHHRRSCLLWRAYSMPVSVAEDRAEDAEDDSEDSPQRIRSQPLSNDELVSLLADSERKKLMIKLGEANQQNRFLKRQLHIKEDSLVNFKSELAVMELEIQALVSLAEEIAQSGIPEGSRKINGKFIQSHLLSRLEAVHEKLKEQIKDVIAAQSKEVPLFWCGVAQSVQVMGTFDGWSQGEHLSPEYNDSFTKFSTTLMLRPG 262 ME TARGCLDKTVSYFSRNLSEL WKNARKISYPVAAAWNLRTSYQK AHEHIVSARIRRHHRRS LLWRAYSMPVSVA DRAEDAEDDSEDSPQRI SQPLSNDEL+SLLADSERKKLMIKL EANQQNRFLKRQL IKED+LV+FKSELAVMELEIQALVSLAEEIAQSGIPE SRKINGKFIQSHLLSRLEAVHEKLKEQIKDVIAAQSKEVPLFW G+AQSVQVMGTFDGWSQGEHLSPEYN SFTKFSTTLMLRPG Sbjct: 1 METGTARGCLDKTVSYFSRNLSELDWKNARKISYPVAAAWNLRTSYQKLAHEHIVSARIRRHHRRSRLLWRAYSMPVSVAGDRAEDAEDDSEDSPQRILSQPLSNDELMSLLADSERKKLMIKLSEANQQNRFLKRQLLIKEDALVDFKSELAVMELEIQALVSLAEEIAQSGIPEDSRKINGKFIQSHLLSRLEAVHEKLKEQIKDVIAAQSKEVPLFWRGMAQSVQVMGTFDGWSQGEHLSPEYNGSFTKFSTTLMLRPG 262
BLAST of eg_v1.0.alternate_g25580.t1 vs. ExPASy TrEMBL
Match: A0A2H5NUG6|A0A2H5NUG6_CITUN (AMPK1_CBM domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_077010 PE=4 SV=1) HSP 1 Score: 473.396 bits (1217), Expect = 9.002e-167 Identity = 245/283 (86.57%), Postives = 253/283 (89.40%), Query Frame = 0 Query: 1 MEIRTARGCLDKTVSYFSRNLSELGWKNARKISYPVAAAWNLRTSYQKFAHEHIVSARIRRHHRRSCLLWRAYSMPVSVAEDRAEDAEDDSEDSPQRIRSQPLSNDELVSLLADSERKKLMIKLGEANQQNRFLKRQLHIKEDSLVNFKSELAVMELEIQ---------------------ALVSLAEEIAQSGIPEGSRKINGKFIQSHLLSRLEAVHEKLKEQIKDVIAAQSKEVPLFWCGVAQSVQVMGTFDGWSQGEHLSPEYNDSFTKFSTTLMLRPG 262 MEI TARGCLDKTVSYFSRNLSELGWKNARK+SYPVAAAWNLRTSYQK AHEHIVSARIRRHHRRS LLWRAYSMPVSVA DRAEDAEDDS+DSPQRI SQPLSNDEL+SLLADS+RKKLM KL EANQQNRFLKRQLHIKED+LV+FKSELAVMELE+Q ALVSLAEEIAQSGIPEGSRKINGKFIQSHLLSRLEAVHEKLKEQIKDVIA QSKEVPLFWCG+AQSVQVMGTFDGWSQGEHLSPEYN SFTKFSTTLMLRPG Sbjct: 1 MEIGTARGCLDKTVSYFSRNLSELGWKNARKVSYPVAAAWNLRTSYQKLAHEHIVSARIRRHHRRSRLLWRAYSMPVSVAADRAEDAEDDSKDSPQRILSQPLSNDELMSLLADSQRKKLMTKLSEANQQNRFLKRQLHIKEDALVDFKSELAVMELEMQCHGKPLMYEAVSMFLHVLGVKALVSLAEEIAQSGIPEGSRKINGKFIQSHLLSRLEAVHEKLKEQIKDVIAVQSKEVPLFWCGMAQSVQVMGTFDGWSQGEHLSPEYNGSFTKFSTTLMLRPG 283
BLAST of eg_v1.0.alternate_g25580.t1 vs. ExPASy TrEMBL
Match: A0A061EHR2|A0A061EHR2_THECC (5'-AMP-activated protein kinase subunit beta-1 OS=Theobroma cacao OX=3641 GN=TCM_019177 PE=4 SV=1) HSP 1 Score: 351.673 bits (901), Expect = 5.713e-119 Identity = 179/269 (66.54%), Postives = 215/269 (79.93%), Query Frame = 0 Query: 1 MEIRTARGCLDKTVSYFSRNLSELGWKNARKISYPVAAAWNLRTSYQKFAHEHIVSARIRRHHRRSCLLWRAYSMPVSVAE-------DRAEDAEDDSEDSPQRIRSQPLSNDELVSLLADSERKKLMIKLGEANQQNRFLKRQLHIKEDSLVNFKSELAVMELEIQALVSLAEEIAQSGIPEGSRKINGKFIQSHLLSRLEAVHEKLKEQIKDVIAAQSKEVPLFWCGVAQSVQVMGTFDGWSQGEHLSPEYNDSFTKFSTTLMLRPG 262 MEI T R CLDK +S+FS +L L +NA ++ Y + W LRTS+++ + SAR +SC++W+ +S+PV + E D + E SEDSP+++ ++PLS+DEL SLLADSER KL KL EANQQNRFLKRQLHIKED+LVNFKSELAVMELEIQALVSLAEEI+Q+GIPEGSRKING++IQSHL SRLEAVHEKLKEQIKDV AA+SKE+PLFWCG+A+SVQVMG+FDGWSQGEHLSPEY SFTKFSTTL+LRPG Sbjct: 1 MEIATTRCCLDKQISWFSSHLRALDAENAHRLPY-ILTGWKLRTSHRRLT---LDSAR---KQNKSCIVWKTHSVPVGLEESSSLQSGDPLNEDEIVSEDSPEQLFAKPLSSDELKSLLADSERTKLTKKLSEANQQNRFLKRQLHIKEDALVNFKSELAVMELEIQALVSLAEEISQAGIPEGSRKINGRYIQSHLHSRLEAVHEKLKEQIKDVDAARSKEIPLFWCGMAESVQVMGSFDGWSQGEHLSPEYTGSFTKFSTTLLLRPG 262
BLAST of eg_v1.0.alternate_g25580.t1 vs. ExPASy TrEMBL
Match: A0A5N6QZH7|A0A5N6QZH7_9ROSI (AMPK1_CBM domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_007827 PE=4 SV=1) HSP 1 Score: 347.821 bits (891), Expect = 1.661e-117 Identity = 179/267 (67.04%), Postives = 206/267 (77.15%), Query Frame = 0 Query: 1 MEIRTARGCLDKTVSYFSRNLSELGWKNARKISYPVAAAWNLRTSYQKFAHEHIVSARIRRHHRRSCLLWRAYSMPVSVAEDRAEDAED-----DSEDSPQRIRSQPLSNDELVSLLADSERKKLMIKLGEANQQNRFLKRQLHIKEDSLVNFKSELAVMELEIQALVSLAEEIAQSGIPEGSRKINGKFIQSHLLSRLEAVHEKLKEQIKDVIAAQSKEVPLFWCGVAQSVQVMGTFDGWSQGEHLSPEYNDSFTKFSTTLMLRPG 262 M+I TAR CLDK VS RN +GW+N +K + VAA WNLR YQ+ + H S + + ++WR Y MPVS+ E A +ED D+ P+ + + PLS+DEL SLLADSER +L+ KL EANQQNRFLKRQLHIKED+LVNFKSELAVMELEIQALV+LAEEI +S IP GSRKINGK+IQSHLLSR+EAVH KLKEQIKDV AQSKEVPLFWCG+A+SVQVMGTFDGWSQGE LSPEY SFTKFSTTLMLRPG Sbjct: 1 MDIGTARCCLDKQVSLVLRNSRAIGWENIQKHPHNVAA-WNLRMGYQRLTYSHQSSIG---KNPVTHVVWRTYPMPVSLQESSALSSEDYSSNDDATKLPKEVHAHPLSSDELKSLLADSERARLIKKLSEANQQNRFLKRQLHIKEDALVNFKSELAVMELEIQALVTLAEEITKSAIPVGSRKINGKYIQSHLLSRVEAVHGKLKEQIKDVDIAQSKEVPLFWCGMAESVQVMGTFDGWSQGEQLSPEYTGSFTKFSTTLMLRPG 263
BLAST of eg_v1.0.alternate_g25580.t1 vs. ExPASy TrEMBL
Match: A0A6J1BBB4|A0A6J1BBB4_9ROSI (protein PTST, chloroplastic OS=Herrania umbratica OX=108875 GN=LOC110425760 PE=4 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 1.703e-116 Identity = 176/269 (65.43%), Postives = 209/269 (77.70%), Query Frame = 0 Query: 1 MEIRTARGCLDKTVSYFSRNLSELGWKNARKISYPVAAAWNLRTSYQKFAHEHIVSARIRRHHRRSCLLWRAYSMPVSVAE-------DRAEDAEDDSEDSPQRIRSQPLSNDELVSLLADSERKKLMIKLGEANQQNRFLKRQLHIKEDSLVNFKSELAVMELEIQALVSLAEEIAQSGIPEGSRKINGKFIQSHLLSRLEAVHEKLKEQIKDVIAAQSKEVPLFWCGVAQSVQVMGTFDGWSQGEHLSPEYNDSFTKFSTTLMLRPG 262 MEI T R CLDK VS+ S +L L +NA ++ Y + W LRT +Q+ + +SC++W+ +S+PV + E D + E+ SEDSP++ ++PLS+DEL SLLADSER KL KL E+NQQNRFLKRQL IKEDSLVNFKSELAVMELEIQALVSLAEEI+Q+GIPEGSRKING++IQSHL SRLEAVHEKLKEQIKDV AAQSKE+PLFWCG+A+SVQVMG+FDGWSQGEHLSPEY SFTKFSTTL+LRPG Sbjct: 1 MEIATTRCCLDKQVSWISSHLRALDAENAHRLPY-ILTGWKLRTIHQRLTLDSA------GKQNKSCIVWKTHSVPVGLEESSSLQSGDPLNEDENVSEDSPEKPFAKPLSSDELKSLLADSERAKLTKKLSESNQQNRFLKRQLQIKEDSLVNFKSELAVMELEIQALVSLAEEISQAGIPEGSRKINGRYIQSHLHSRLEAVHEKLKEQIKDVDAAQSKEIPLFWCGMAESVQVMGSFDGWSQGEHLSPEYTGSFTKFSTTLLLRPG 262
BLAST of eg_v1.0.alternate_g25580.t1 vs. ExPASy TrEMBL
Match: A0A6P6B4E4|A0A6P6B4E4_DURZI (protein PTST, chloroplastic-like isoform X1 OS=Durio zibethinus OX=66656 GN=LOC111314638 PE=4 SV=1) HSP 1 Score: 336.65 bits (862), Expect = 4.110e-113 Identity = 175/269 (65.06%), Postives = 210/269 (78.07%), Query Frame = 0 Query: 1 MEIRTARGCLDKTVSYFSRNLSELGWKNARKISYPVAAAWNLRTSYQKFAHEHIVSARIRRHHRRSCLLWRAYSMPVSVAEDRAEDAEDD-------SEDSPQRIRSQPLSNDELVSLLADSERKKLMIKLGEANQQNRFLKRQLHIKEDSLVNFKSELAVMELEIQALVSLAEEIAQSGIPEGSRKINGKFIQSHLLSRLEAVHEKLKEQIKDVIAAQSKEVPLFWCGVAQSVQVMGTFDGWSQGEHLSPEYNDSFTKFSTTLMLRPG 262 MEI T R LDK VS+FS NL L +N+ ++ Y + A W LRTSYQ+ A+ ++ S R ++H S ++W +SMPV + E + +ED SEDSP++ ++PLS+DEL SLL DSER KL KL EANQQNRFLKRQLHIKED+LVNFKSELAVMELEIQALVSLAEEI+++GIPEGSRKING++IQSHL +RLEAVH+KLKEQI DV AQS+E PLFWCG+A+SVQVMG+FDGW QGEHLSPEY S TKFSTTL LRPG Sbjct: 1 MEIATTRCFLDKQVSWFSLNLRALDRENSYRLPYNLTA-WKLRTSYQRLAYLNLDSHR-KQH--MSHIVWNTHSMPVGLEESSSLQSEDPFSEYEHASEDSPEQHLAKPLSSDELKSLLVDSERTKLTKKLSEANQQNRFLKRQLHIKEDALVNFKSELAVMELEIQALVSLAEEISKAGIPEGSRKINGRYIQSHLYTRLEAVHKKLKEQINDVDTAQSREFPLFWCGMAESVQVMGSFDGWIQGEHLSPEYTGSLTKFSTTLSLRPG 265
BLAST of eg_v1.0.alternate_g25580.t1 vs. ExPASy TrEMBL
Match: A0A6A1VF17|A0A6A1VF17_9ROSI (5'-AMP-activated protein kinase subunit beta-1 OS=Morella rubra OX=262757 GN=CJ030_MR6G021509 PE=4 SV=1) HSP 1 Score: 336.265 bits (861), Expect = 5.258e-113 Identity = 174/266 (65.41%), Postives = 204/266 (76.69%), Query Frame = 0 Query: 1 MEIRTARGCLDKTVSYFSRNLSELGWKNARKISYPVAAAWNLRTSYQKFAHEHIVSARIRRHHRRSCLLWRAYSMPVSVAEDRAEDAED----DSEDSPQRIRSQPLSNDELVSLLADSERKKLMIKLGEANQQNRFLKRQLHIKEDSLVNFKSELAVMELEIQALVSLAEEIAQSGIPEGSRKINGKFIQSHLLSRLEAVHEKLKEQIKDVIAAQSKEVPLFWCGVAQSVQVMGTFDGWSQGEHLSPEYNDSFTKFSTTLMLRPG 262 M+I AR CLDK VS+F N LGW+N K+ Y VA + NLR Q+ A+ S + + + + WR YS+PVS+ E + ED D+ + + + +QPL +DEL SLLADSER +L+ KL EANQQNRFLKRQLHIKED+LVNFKSELAVMELEIQALV+LAEEIA+ IP GSRKINGK+IQSHLL+RLEAV KLKEQIKDV AQSK+VPLFWCG+A+SVQVMGTFDGWSQGEHLSPEY SFTKFSTTLMLRPG Sbjct: 1 MDIPAARCCLDKHVSWFLMNSRALGWENIHKLPYNVAGS-NLRIGCQRLAYPQQSSIK----YPMTRVFWRTYSVPVSLEESSSVQLEDHSSKDATELLEEVLAQPLGSDELKSLLADSERTRLIQKLSEANQQNRFLKRQLHIKEDALVNFKSELAVMELEIQALVTLAEEIAKFDIPRGSRKINGKYIQSHLLTRLEAVRGKLKEQIKDVDTAQSKQVPLFWCGMAESVQVMGTFDGWSQGEHLSPEYTGSFTKFSTTLMLRPG 261
BLAST of eg_v1.0.alternate_g25580.t1 vs. ExPASy TrEMBL
Match: A0A1R3GBP8|A0A1R3GBP8_COCAP (AMPK1_CBM domain-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_27217 PE=4 SV=1) HSP 1 Score: 331.643 bits (849), Expect = 3.789e-111 Identity = 174/269 (64.68%), Postives = 209/269 (77.70%), Query Frame = 0 Query: 1 MEIRTARGCLDKTVSYFSRNLSELGWKNARKISYPVAAAWNLRTSYQKFAHEHIVSARIRRHHRRSCLLWRAYSMPVSV-------AEDRAEDAEDDSEDSPQRIRSQPLSNDELVSLLADSERKKLMIKLGEANQQNRFLKRQLHIKEDSLVNFKSELAVMELEIQALVSLAEEIAQSGIPEGSRKINGKFIQSHLLSRLEAVHEKLKEQIKDVIAAQSKEVPLFWCGVAQSVQVMGTFDGWSQGEHLSPEYNDSFTKFSTTLMLRPG 262 MEI T R LDK VS+FS L LG +NA ++ Y + LRTSY + + + SAR + R ++WR +SMPV + +ED + E DSEDS +++ ++PLS+DEL +LL D+ER KL KL EANQQNRFLKRQLHIKED+LVNFKSELAVMELEIQALVSLAEEI+Q+GIPEGSRKING++IQSHL +RLEAV EKL+EQ+KDV AAQSKEV LFW G+A+SVQVMG+FDGWSQGEHLSPEY SFTKFSTTL+LRPG Sbjct: 1 MEIATTRCYLDKQVSWFSSKLRALGLENALRLPYSLTTR-KLRTSYHRLGYLNSCSARKKNMSR---IVWRTHSMPVDLEESSSLQSEDPLNEDEHDSEDSQEQL-AKPLSSDELKALLVDAERAKLTKKLSEANQQNRFLKRQLHIKEDALVNFKSELAVMELEIQALVSLAEEISQAGIPEGSRKINGRYIQSHLHTRLEAVLEKLREQLKDVDAAQSKEVSLFWIGMAESVQVMGSFDGWSQGEHLSPEYTGSFTKFSTTLLLRPG 264
BLAST of eg_v1.0.alternate_g25580.t1 vs. ExPASy TrEMBL
Match: A0A7N2KX24|A0A7N2KX24_QUELO (AMPK1_CBM domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 1.023e-110 Identity = 177/277 (63.90%), Postives = 209/277 (75.45%), Query Frame = 0 Query: 1 MEIRTARGCLDKTVSYFSRNLSELGWKNARKISYPVAAAWNLRTSYQKFAHEHIVSARIRRHHRRSCLLWRAYSMPVSVAEDRAEDAED-----DSEDSPQRIRSQPLSNDELVSLLADSERKKLMIKLGEANQQNRFLKRQLHIKEDSLVNFKSELAVMELEIQALVSLAEEIAQSGIPEGSRKINGKFIQSHLLSRLE----------AVHEKLKEQIKDVIAAQSKEVPLFWCGVAQSVQVMGTFDGWSQGEHLSPEYNDSFTKFSTTLMLRPG 262 MEI +AR CLDK VS+FSRNL LGW+N K+ Y VAA W LR Y + + H S H + + WR YS+PVS+ E + +++ D+ + P+ + +QPLS DEL SLLADSER +L+ KL EANQQNRFLKRQLH+KED+LVNFKS+LAV+ELE+QALV+LAEEIA+S P GSRKINGK+IQSHLLSRLE AV EKL EQIKDV AA+SKEVPLFW G+A+SVQVMGTFDGWSQGEHLSPEY SFTKFSTTLMLRPG Sbjct: 1 MEIGSARCCLDKQVSWFSRNLRTLGWENIDKLPYNVAA-WKLRMGYPRLMYLHQSSMG---KHPMAHVFWRRYSIPVSLEESSSLKSKNYSSNADATELPENLLAQPLSRDELKSLLADSERTRLIRKLSEANQQNRFLKRQLHVKEDALVNFKSKLAVLELEVQALVTLAEEIAKSVTPVGSRKINGKYIQSHLLSRLEDSAAIVSVYKAVCEKLNEQIKDVDAARSKEVPLFWIGMAESVQVMGTFDGWSQGEHLSPEYTGSFTKFSTTLMLRPG 273
BLAST of eg_v1.0.alternate_g25580.t1 vs. ExPASy Swiss-Prot
Match: PTST_ARATH (Protein PTST, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTST PE=1 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 5.785e-82 Identity = 137/240 (57.08%), Postives = 171/240 (71.25%), Query Frame = 0 Query: 33 SYPVAAAWNLR----------TSYQKFAHEHIVSARIRRHHRRSCLLWRAYSMPVSVAEDRAEDAEDDSEDSPQRIRSQPLSNDELVSLLADSERKKLMIKLGEANQQNRFLKRQLHIKEDSLVNFKSELAVMELEIQALVSLAEEIAQSGIPEGSRKINGKFIQSHLLSRLEAVHEKLKEQIKDVIAAQSKEVPLFWCGVAQSVQVMGTFDGWSQGEHLSPEYNDSFTKFSTTLMLRPG 262 S + +WNLR + +QK + + S R +H++ S LL R V V + + +ED ++S R PL++DEL SLL D+ER KL+ KL EANQQNRFLKRQL +E + N K+ELA+MELE+QALV LAEEIA GIP+GSRKI+GK+IQSHLLSRL+AV +K+KEQIK V AAQSKEV +FW G+A+SVQVMG+FDGWSQ E LSPEY+ FTKFSTTL LRPG Sbjct: 13 SQSLTLSWNLRAWNLCRLNTISHFQKLPYPLVASTR--KHYKNSLLLKRFL---VGVGTEESSLSEDLLDESLSR----PLTSDELKSLLIDTERSKLVKKLSEANQQNRFLKRQLKTQEHEITNIKTELALMELEVQALVKLAEEIANLGIPQGSRKISGKYIQSHLLSRLDAVQKKMKEQIKGVEAAQSKEVHVFWIGMAESVQVMGSFDGWSQREDLSPEYSALFTKFSTTLFLRPG 243
BLAST of eg_v1.0.alternate_g25580.t1 vs. Araport11
Match: AT5G39790.3 (| PROTEIN TARGETING TO STARCH (PTST) | Chr5:15932884-15935121 REVERSE LENGTH=280 | 201606) HSP 1 Score: 244.202 bits (622), Expect = 1.458e-80 Identity = 136/243 (55.97%), Postives = 172/243 (70.78%), Query Frame = 0 Query: 33 SYPVAAAWNLR----------TSYQKFAHEHIVSARIRRHHRRSCLLWRAYSMPVSVAEDRAEDAEDDSEDSPQRIRSQPLSNDELVSLLADSERKKLMIKLGEANQQNRFLKRQLHI---KEDSLVNFKSELAVMELEIQALVSLAEEIAQSGIPEGSRKINGKFIQSHLLSRLEAVHEKLKEQIKDVIAAQSKEVPLFWCGVAQSVQVMGTFDGWSQGEHLSPEYNDSFTKFSTTLMLRPG 262 S + +WNLR + +QK + + S R +H++ S LL R V V + + +ED ++S R PL++DEL SLL D+ER KL+ KL EANQQNRFLKRQ+ + +E + N K+ELA+MELE+QALV LAEEIA GIP+GSRKI+GK+IQSHLLSRL+AV +K+KEQIK V AAQSKEV +FW G+A+SVQVMG+FDGWSQ E LSPEY+ FTKFSTTL LRPG Sbjct: 13 SQSLTLSWNLRAWNLCRLNTISHFQKLPYPLVASTR--KHYKNSLLLKRFL---VGVGTEESSLSEDLLDESLSR----PLTSDELKSLLIDTERSKLVKKLSEANQQNRFLKRQVLVFKTQEHEITNIKTELALMELEVQALVKLAEEIANLGIPQGSRKISGKYIQSHLLSRLDAVQKKMKEQIKGVEAAQSKEVHVFWIGMAESVQVMGSFDGWSQREDLSPEYSALFTKFSTTLFLRPG 246
BLAST of eg_v1.0.alternate_g25580.t1 vs. Araport11
Match: AT5G39790.1 (| PROTEIN TARGETING TO STARCH (PTST) | Chr5:15932884-15935121 REVERSE LENGTH=273 | 201606) HSP 1 Score: 243.432 bits (620), Expect = 3.212e-80 Identity = 136/240 (56.67%), Postives = 169/240 (70.42%), Query Frame = 0 Query: 33 SYPVAAAWNLR----------TSYQKFAHEHIVSARIRRHHRRSCLLWRAYSMPVSVAEDRAEDAEDDSEDSPQRIRSQPLSNDELVSLLADSERKKLMIKLGEANQQNRFLKRQLHIKEDSLVNFKSELAVMELEIQALVSLAEEIAQSGIPEGSRKINGKFIQSHLLSRLEAVHEKLKEQIKDVIAAQSKEVPLFWCGVAQSVQVMGTFDGWSQGEHLSPEYNDSFTKFSTTLMLRPG 262 S + +WNLR + +QK + + S R +H++ S LL R V V + + +ED ++S R PL++DEL SLL D+ER KL+ KL EANQQNRFLKRQ H + N K+ELA+MELE+QALV LAEEIA GIP+GSRKI+GK+IQSHLLSRL+AV +K+KEQIK V AAQSKEV +FW G+A+SVQVMG+FDGWSQ E LSPEY+ FTKFSTTL LRPG Sbjct: 13 SQSLTLSWNLRAWNLCRLNTISHFQKLPYPLVASTR--KHYKNSLLLKRFL---VGVGTEESSLSEDLLDESLSR----PLTSDELKSLLIDTERSKLVKKLSEANQQNRFLKRQEH----EITNIKTELALMELEVQALVKLAEEIANLGIPQGSRKISGKYIQSHLLSRLDAVQKKMKEQIKGVEAAQSKEVHVFWIGMAESVQVMGSFDGWSQREDLSPEYSALFTKFSTTLFLRPG 239
BLAST of eg_v1.0.alternate_g25580.t1 vs. Araport11
Match: AT5G39790.2 (| PROTEIN TARGETING TO STARCH (PTST) | Chr5:15933363-15935121 REVERSE LENGTH=209 | 201606) HSP 1 Score: 141.739 bits (356), Expect = 2.460e-41 Identity = 86/174 (49.43%), Postives = 113/174 (64.94%), Query Frame = 0 Query: 33 SYPVAAAWNLR----------TSYQKFAHEHIVSARIRRHHRRSCLLWRAYSMPVSVAEDRAEDAEDDSEDSPQRIRSQPLSNDELVSLLADSERKKLMIKLGEANQQNRFLKRQLHIKEDSLVNFKSELAVMELEIQALVSLAEEIAQSGIPEGSRKINGKFIQSHLLSRLEA 196 S + +WNLR + +QK + + S R +H++ S LL R V V + + +ED ++S S+PL++DEL SLL D+ER KL+ KL EANQQNRFLKRQ E + N K+ELA+MELE+QALV LAEEIA GIP+GSRKI+GK+IQSHLLSRL+ Sbjct: 13 SQSLTLSWNLRAWNLCRLNTISHFQKLPYPLVASTR--KHYKNSLLLKRFL---VGVGTEESSLSEDLLDES----LSRPLTSDELKSLLIDTERSKLVKKLSEANQQNRFLKRQ----EHEITNIKTELALMELEVQALVKLAEEIANLGIPQGSRKISGKYIQSHLLSRLDG 173 The following BLAST results are available for this feature:
BLAST of eg_v1.0.alternate_g25580.t1 vs. ExPASy TrEMBL
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of eg_v1.0.alternate_g25580.t1 vs. ExPASy Swiss-Prot
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs UniProt Swissprot) Total hits: 1 Position : 0 Zoom : x 1
BLAST of eg_v1.0.alternate_g25580.t1 vs. Araport11
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs Araport11) Total hits: 3 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus glauca CRC3463 v1.0 v1.0 proteins
Date Performed: 2024-01-20 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >eg_v1.0.alternate_g25580.t1-ucr_v1 ID=eg_v1.0.alternate_g25580.t1-ucr_v1; Name=eg_v1.0.alternate_g25580.t1; organism=Citrus glauca; type=mRNA; length=891bpback to top protein sequence of eg_v1.0.alternate_g25580.t1-ucr_v1 >eg_v1.0.alternate_g25580.t1-ucr_v1 ID=eg_v1.0.alternate_g25580.t1-ucr_v1; Name=eg_v1.0.alternate_g25580.t1-ucr_v1; organism=Citrus glauca; type=polypeptide; length=263bpback to top mRNA from alignment at Alt_Scaffold_6:30642120..30644605- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=2486bp; location=Sequence derived from: Alt_Scaffold_6:30642120..30644605- (Citrus glaucaback to top Coding sequence (CDS) from alignment at Alt_Scaffold_6:30642120..30644605- >eg_v1.0.alternate_g25580.t1-ucr_v1 ID=eg_v1.0.alternate_g25580.t1-ucr_v1; Name=eg_v1.0.alternate_g25580.t1; organism=Citrus glauca; type=CDS; length=791bp; location=Sequence derived from: Alt_Scaffold_6:30642120..30644605- (Citrus glaucaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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