eg_v1.0.alternate_g25615.t1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of eg_v1.0.alternate_g25615.t1 vs. ExPASy TrEMBL
Match: A0A067FAG8|A0A067FAG8_CITSI (RING-type E3 ubiquitin transferase (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g038900mg PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.322e-69 Identity = 103/107 (96.26%), Postives = 105/107 (98.13%), Query Frame = 0 Query: 45 CEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSVLFR 151
CE GHMVCTTC+SKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAE+GCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSV FR
Sbjct: 1 CENGHMVCTTCRSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEYGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSVPFR 107
BLAST of eg_v1.0.alternate_g25615.t1 vs. ExPASy TrEMBL
Match: A0A2H5NVF4|A0A2H5NVF4_CITUN (RING-type E3 ubiquitin transferase OS=Citrus unshiu OX=55188 GN=CUMW_077310 PE=3 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 4.577e-66 Identity = 99/102 (97.06%), Postives = 101/102 (99.02%), Query Frame = 0 Query: 50 MVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSVLFR 151
MVCTTC+SKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAE+GCNE LGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSVLFR
Sbjct: 1 MVCTTCRSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEYGCNETLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSVLFR 102
BLAST of eg_v1.0.alternate_g25615.t1 vs. ExPASy TrEMBL
Match: V4SXW2|V4SXW2_CITCL (RING-type E3 ubiquitin transferase OS=Citrus clementina OX=85681 GN=CICLE_v10013760mg PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 1.278e-65 Identity = 99/102 (97.06%), Postives = 101/102 (99.02%), Query Frame = 0 Query: 50 MVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSVLFR 151
MVCTTC+SKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAE+GCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSV FR
Sbjct: 1 MVCTTCRSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEYGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSVPFR 102
BLAST of eg_v1.0.alternate_g25615.t1 vs. ExPASy TrEMBL
Match: A0A5C7IL16|A0A5C7IL16_9ROSI (RING-type E3 ubiquitin transferase OS=Acer yangbiense OX=1000413 GN=EZV62_004918 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 5.066e-47 Identity = 83/156 (53.21%), Postives = 108/156 (69.23%), Query Frame = 0 Query: 3 EEHEAPAAKR-------VCRSGSVSITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSVLFR 151
E+H + A R R+GS+S+TL D +VLDC ICF P PV+QCE GH+ C++C SK++N CP SPI Y R R IEK+LESVK V CKN ++GC E + Y ++NDHEK C H+PC CPLS C F+G+ S+LYQHF +H+NS+V FR
Sbjct: 73 EQHGSSANNRDRTDVVGASRNGSISVTLTDPEVLDCFICFDPLTIPVFQCENGHVACSSCCSKLRN-KCPSCCSPIGYNRCRAIEKVLESVK-VICKNGKYGCKETMSYSQRNDHEKTCHHAPCWCPLSDCSFVGTCSRLYQHFMDRHKNSAVQFR 226
BLAST of eg_v1.0.alternate_g25615.t1 vs. ExPASy TrEMBL
Match: W9S0Z7|W9S0Z7_9ROSA (RING-type E3 ubiquitin transferase OS=Morus notabilis OX=981085 GN=L484_027128 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 4.677e-43 Identity = 73/134 (54.48%), Postives = 97/134 (72.39%), Query Frame = 0 Query: 18 SVSITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSVLFR 151
S+S+ L D DVLDC ICF PV+QCE GH+ C++C +K+ N CP PI Y R R IEK+LESVK ++C+N ++GC EM+ Y E DHE C H+PCSCPL+ C+F+ S+ QLYQHFR+QH +S+VLF+
Sbjct: 111 SISVFLTDPDVLDCCICFEALTVPVFQCENGHIACSSCCTKLGN-KCPSCSWPIGYNRCRAIEKVLESVK-IACQNKQYGCKEMVSYSEIKDHETTCTHAPCSCPLTSCNFISSAKQLYQHFRSQHADSAVLFQ 242
BLAST of eg_v1.0.alternate_g25615.t1 vs. ExPASy TrEMBL
Match: A0A2R6RKR1|A0A2R6RKR1_ACTCC (RING-type E3 ubiquitin transferase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc05900 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.109e-43 Identity = 77/145 (53.10%), Postives = 99/145 (68.28%), Query Frame = 0 Query: 7 APAAKRVCRSGSVSITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSVLFR 151
P+ + R GS+S+TL D DVLDCPIC P PV+QCE GH+ C++C K++N CP PI Y R R IEK++ESVK +SC+N ++GC E + Y +K+ HEKAC +PCSCPLS C FLGSS+QL HF + H NS FR
Sbjct: 87 GPSWSKDDRDGSISVTLTDPDVLDCPICLEPLSSPVFQCENGHVACSSCCIKLRNK-CPSCSWPIGYNRCRAIEKVIESVK-ISCENLKYGCKETVIYSKKHGHEKACTFAPCSCPLSACTFLGSSNQLSLHFSSTHPNSGKHFR 229
BLAST of eg_v1.0.alternate_g25615.t1 vs. ExPASy TrEMBL
Match: M5XIS0|M5XIS0_PRUPE (RING-type E3 ubiquitin transferase OS=Prunus persica OX=3760 GN=PRUPE_3G152000 PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.228e-42 Identity = 74/134 (55.22%), Postives = 96/134 (71.64%), Query Frame = 0 Query: 17 GSVSITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSVLF 150
GS+ TLAD +VLDC IC+ P PV+QCE GH+ C++C +K KN CP PI Y R R IEK+LES++ +SC+N +HGC EM+ Y +KN+HEKAC +SPCSCPLSGC+F+ SS QLY HF H + + F
Sbjct: 166 GSLVFTLADPEVLDCLICYEPLTIPVFQCENGHIACSSCCTKSKNK-CPSCSWPIGYNRCRAIEKILESIR-ISCRNIKHGCKEMVTYNKKNEHEKACMYSPCSCPLSGCNFISSSKQLYLHFTVSHVDYATRF 297
BLAST of eg_v1.0.alternate_g25615.t1 vs. ExPASy TrEMBL
Match: A0A6P5TZ30|A0A6P5TZ30_PRUAV (RING-type E3 ubiquitin transferase OS=Prunus avium OX=42229 GN=LOC110772019 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.451e-42 Identity = 77/149 (51.68%), Postives = 102/149 (68.46%), Query Frame = 0 Query: 3 EEHEAPAAKRVCRSGSVSITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSVLFR 151
+E + P V GS+ TLAD +VLDC IC+ P PV+QCE GH+ C++C +K KN CP PI Y R R IEK+LES++ +SC+N +HGC EM+ Y +KN+HEKAC +SPCSCPLSGC+F+ SS QLY HF H + + F+
Sbjct: 161 QEGDPPPISPVT-DGSLVFTLADPEVLDCLICYEPLTIPVFQCENGHIACSSCCTKSKNK-CPSCSMPIGYNRCRAIEKILESIR-ISCQNIKHGCKEMVTYNKKNEHEKACMYSPCSCPLSGCNFISSSKQLYLHFTVSHVDYATRFQ 306
BLAST of eg_v1.0.alternate_g25615.t1 vs. ExPASy TrEMBL
Match: A0A5E4FK17|A0A5E4FK17_PRUDU (RING-type E3 ubiquitin transferase OS=Prunus dulcis OX=3755 GN=ALMOND_2B011606 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.520e-42 Identity = 74/134 (55.22%), Postives = 96/134 (71.64%), Query Frame = 0 Query: 17 GSVSITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSVLF 150
GS+ TLAD +VLDC IC+ P PV+QCE GH+ C++C +K KN CP PI Y R R IEK+LES++ +SC+N +HGC EM+ Y +KN+HEKAC +SPCSCPLSGC+F+ SS QLY HF H + + F
Sbjct: 172 GSLVFTLADPEVLDCLICYEPLTIPVFQCENGHIACSSCCTKSKNK-CPSCSWPIGYNRCRAIEKILESIR-ISCQNIKHGCKEMVTYNKKNEHEKACMYSPCSCPLSGCNFISSSKQLYLHFTVSHVDYATRF 303
BLAST of eg_v1.0.alternate_g25615.t1 vs. ExPASy TrEMBL
Match: A0A2P6RGT3|A0A2P6RGT3_ROSCH (RING-type E3 ubiquitin transferase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0493571 PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 7.786e-42 Identity = 74/133 (55.64%), Postives = 95/133 (71.43%), Query Frame = 0 Query: 18 SVSITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSVLF 150
S+SITL D DVLDCPIC PV+QCE GH+ C++C +KIKN CP PI Y R R IEK+LES++ +SC+N ++GC E + KN+HEKAC HSPCSCP SGC+F+ S+ +LYQHF + H NS+ F
Sbjct: 111 SISITLTDPDVLDCPICCESLTVPVFQCENGHIACSSCSTKIKNK-CPSCSWPIGYNRCRAIEKVLESIR-MSCQNIKYGCKERMTCNNKNEHEKACMHSPCSCPHSGCNFVSSTKKLYQHFSSNHLNSATRF 241
BLAST of eg_v1.0.alternate_g25615.t1 vs. ExPASy Swiss-Prot
Match: SIL10_ARATH (E3 ubiquitin-protein ligase SINA-like 10 OS=Arabidopsis thaliana OX=3702 GN=At5g37930 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.744e-32 Identity = 57/130 (43.85%), Postives = 82/130 (63.08%), Query Frame = 0 Query: 21 ITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSVLF 150
+TL D DVLDCPIC P + P++QC+ GH+ CT C +K++N CP PI Y R R +EK++E+ + VSC NA++GC E Y + HE+ C +PCSCP+ C + G L H RA+H++ + F
Sbjct: 103 VTLLDPDVLDCPICCEPLKIPIFQCDNGHLACTLCCTKVRN-RCPSCTLPIGYVRCRAMEKVIEASR-VSCLNAKYGCKESTSYGNRFSHEQVCVFTPCSCPILDCHYTGYYKDLNNHVRAEHKDDLISF 230
BLAST of eg_v1.0.alternate_g25615.t1 vs. ExPASy Swiss-Prot
Match: SINL6_ARATH (Putative E3 ubiquitin-protein ligase SINA-like 6 OS=Arabidopsis thaliana OX=3702 GN=At5g37870 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.225e-32 Identity = 58/140 (41.43%), Postives = 87/140 (62.14%), Query Frame = 0 Query: 11 KRVCRSGSVSITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSVLF 150
KRV ++ S +T D D+LDCPIC+ + PV+QC GH+ C++C K++N CP P+ + R R +E++LESV V C+ A+ GC + + Y ++ HEK C SPCSCP+ GC++ GS LY+H+ H S +
Sbjct: 27 KRVDKTRSAMLT--DLDILDCPICYQALKIPVFQCGNGHLACSSCCPKLRNK-CPACALPVGHIRCRAMERVLESVL-VPCRYADLGCTKTIYYGRESTHEKICNFSPCSCPVQGCNYTGSYKDLYEHYDLTHSTGSTAY 162
BLAST of eg_v1.0.alternate_g25615.t1 vs. ExPASy Swiss-Prot
Match: SINL9_ARATH (Putative E3 ubiquitin-protein ligase SINA-like 9 OS=Arabidopsis thaliana OX=3702 GN=At5g37910 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 6.961e-29 Identity = 53/141 (37.59%), Postives = 80/141 (56.74%), Query Frame = 0 Query: 6 EAPAAKRVCRSGSVSITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNS 146
+ +RV + +I L D D+LDCPIC P++QC+ GH+ C +C K+ N CP P+ ++R+R +E +LES+ + C N GC + Y +++ HEK C S CSCP S CD+ GS LY H++ H +
Sbjct: 13 QGDGGERVAKRQRSAIVLLDLDILDCPICCEALTSPIFQCDNGHLACGSCCPKLSNK-CPACTLPVGHSRSRAMESVLESIL-IPCPNVRFGCTKSFFYGKESAHEKECIFSQCSCPSSVCDYTGSYKDLYAHYKLTHSTN 151
BLAST of eg_v1.0.alternate_g25615.t1 vs. ExPASy Swiss-Prot
Match: SINL3_ARATH (E3 ubiquitin-protein ligase SINA-like 3 OS=Arabidopsis thaliana OX=3702 GN=At1g66630 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.125e-28 Identity = 52/134 (38.81%), Postives = 85/134 (63.43%), Query Frame = 0 Query: 20 SITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKND--HEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSVLFR 151
S TL + D+LDCPIC+ P+YQC+ GH+ C++C K+K CP+ I + R+R++EK++E+V VSC NA++GC E + Y +++ HE+ C+ + C CP C + G + LY+H+ A+H+ F+
Sbjct: 38 SATLLELDLLDCPICYHKLGAPIYQCDNGHIACSSCCKKVKY-KCPYCSLRIGFFRSRILEKIVEAV-VVSCPNAKYGCTEKIPYDNESESAHERVCEFTLCYCPEPECKYTGVYTDLYRHYHAEHKTDHSWFK 169
BLAST of eg_v1.0.alternate_g25615.t1 vs. ExPASy Swiss-Prot
Match: SINL2_ARATH (E3 ubiquitin-protein ligase SINA-like 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66620 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.697e-28 Identity = 55/144 (38.19%), Postives = 83/144 (57.64%), Query Frame = 0 Query: 3 EEHEAPAAKRVCRSGSVSITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNS 146
E E V RSG TL + D+LDCPIC P++QC+ GH+ C++C +K++N CP PI R+R++E+++E+V V+C N +HGC E Y ++ HEK C+ + C CP C++ G LY HF H ++
Sbjct: 20 ESVENGGGDAVARSG----TLFELDLLDCPICCHALTSPIFQCDNGHIACSSCCTKLRNK-CPSCALPIGNFRSRIMERVVEAVM-VTCPNVKHGCTEKFSYGKELIHEKDCRFALCYCPAPNCNYSGVYKDLYSHFYVNHYDT 157
BLAST of eg_v1.0.alternate_g25615.t1 vs. ExPASy Swiss-Prot
Match: SINL4_ARATH (E3 ubiquitin-protein ligase SINA-like 4 OS=Arabidopsis thaliana OX=3702 GN=At1g66650 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.739e-28 Identity = 58/140 (41.43%), Postives = 82/140 (58.57%), Query Frame = 0 Query: 12 RVCRSGSVS----ITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEK-NDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNS 146
R CR VS +TL +S+VL+CP CF P + P++QC GH+ C C K+K C F + PI R R +EK++++ VSC NA +GC + Y + HEK C +PCSCP+ C+++G L HFRA H+ S
Sbjct: 63 RTCRKRRVSSPKSVTLPNSNVLECPNCFDPLKKPIFQCNNGHLACFLCCIKLKK-RCSFCKLPIGDVRCRAMEKVIKA-GLVSCSNAIYGCKQSTTYGNQLQSHEKVCVFAPCSCPIKDCNYIGFYKDLINHFRATHKVS 200
BLAST of eg_v1.0.alternate_g25615.t1 vs. ExPASy Swiss-Prot
Match: SINL7_ARATH (E3 ubiquitin-protein ligase SINA-like 7 OS=Arabidopsis thaliana OX=3702 GN=At5g37890 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.191e-27 Identity = 54/136 (39.71%), Postives = 81/136 (59.56%), Query Frame = 0 Query: 9 AAKRVCRSGSVSITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQ 144
AAKR + S L D ++LDCPIC+ F P++QC+ GH+ C++C K+ N+ CP SP+ + R R +E +LES+ + C NA+ GC + + Y ++ HEK C S C+CP C++ S LY H+R H
Sbjct: 31 AAKRDAKKRST--MLMDLEILDCPICYEAFTIPIFQCDNGHLACSSCCPKL-NNKCPACTSPVGHNRCRAMESVLESIL-IPCPNAKLGCKKNVSYGKELTHEKECMFSHCACPALDCNYTSSYKDLYTHYRITHM 162
BLAST of eg_v1.0.alternate_g25615.t1 vs. ExPASy Swiss-Prot
Match: SIL11_ARATH (E3 ubiquitin-protein ligase SINA-like 11 OS=Arabidopsis thaliana OX=3702 GN=At5g62800 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 1.229e-26 Identity = 57/144 (39.58%), Postives = 82/144 (56.94%), Query Frame = 0 Query: 8 PAAKRVCRSGSVSITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFD--RSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSVL 149
P K+ + + S L D DVLDCP+CF P P +QC+ GH+VC C +K+ N CP PI R +E++LES V C+N E GC + + Y + + HEK C +S CSCP C++ GS + +Y HF +H +S +
Sbjct: 20 PQKKQRMENETRSAKLLDLDVLDCPVCFEPLTIPTFQCDDGHIVCNFCFAKVSN-KCPGPGCDLPIGNKRCFAMERVLESA-FVPCQNTEFGCTKSVSYEKVSSHEKECNYSQCSCPNLECNYTGSYNIIYGHFMRRHLYNSTI 161
BLAST of eg_v1.0.alternate_g25615.t1 vs. ExPASy Swiss-Prot
Match: SINL5_ARATH (E3 ubiquitin-protein ligase SINA-like 5 OS=Arabidopsis thaliana OX=3702 GN=At1g66660 PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 2.824e-26 Identity = 53/118 (44.92%), Postives = 71/118 (60.17%), Query Frame = 0 Query: 21 ITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQH 138
+ L SDVLDCP C P + P+YQC GH+ C++C K+ N C F R I R R +EK++E+ V C NA+HGC E Y ++ HEK CK CSCP+S C+++ S S L H
Sbjct: 76 VKLQSSDVLDCPTCCEPLKRPIYQCSNGHLACSSCCQKL-NKKCSFCRCNIGDIRCRAMEKVIEA-SIVPCPNAKHGCKETTTYCNQSSHEKVCKFVRCSCPVSNCNYVSSYSNLKSH 191
BLAST of eg_v1.0.alternate_g25615.t1 vs. ExPASy Swiss-Prot
Match: SINA_DROME (E3 ubiquitin-protein ligase sina OS=Drosophila melanogaster OX=7227 GN=sina PE=1 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 1.105e-22 Identity = 48/136 (35.29%), Postives = 75/136 (55.15%), Query Frame = 0 Query: 16 SGSVSITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSP--CSCPLSGCDFLGSSSQLYQHFRAQHQNSSVL 149
G ++ + + +CP+CF PP+ QC GH+VC +C+SK+ CP R P+A RN +EK+ +VK CK++ +GC L Y EK +HE+ C+ P C CP + C + G + QH H++ + L
Sbjct: 58 GGDAGMSADLTSLFECPVCFDYVLPPILQCSSGHLVCVSCRSKLT--CCPTCRGPLANIRNLAMEKVASNVK-FPCKHSGYGCTASLVYTEKTEHEETCECRPYLCPCPGASCKWQGPLDLVMQHLMMSHKSITTL 190
BLAST of eg_v1.0.alternate_g25615.t1 vs. Araport11
Match: AT5G37930.1 (| Protein with RING/U-box and TRAF-like domain | Chr5:15102239-15103651 REVERSE LENGTH=349 | 201606) HSP 1 Score: 120.939 bits (302), Expect = 1.784e-33 Identity = 57/130 (43.85%), Postives = 82/130 (63.08%), Query Frame = 0 Query: 21 ITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSVLF 150
+TL D DVLDCPIC P + P++QC+ GH+ CT C +K++N CP PI Y R R +EK++E+ + VSC NA++GC E Y + HE+ C +PCSCP+ C + G L H RA+H++ + F
Sbjct: 103 VTLLDPDVLDCPICCEPLKIPIFQCDNGHLACTLCCTKVRN-RCPSCTLPIGYVRCRAMEKVIEASR-VSCLNAKYGCKESTSYGNRFSHEQVCVFTPCSCPILDCHYTGYYKDLNNHVRAEHKDDLISF 230
BLAST of eg_v1.0.alternate_g25615.t1 vs. Araport11
Match: AT5G37870.1 (| Protein with RING/U-box and TRAF-like domain | Chr5:15073764-15074851 REVERSE LENGTH=281 | 201606) HSP 1 Score: 118.627 bits (296), Expect = 3.300e-33 Identity = 58/140 (41.43%), Postives = 87/140 (62.14%), Query Frame = 0 Query: 11 KRVCRSGSVSITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSVLF 150
KRV ++ S +T D D+LDCPIC+ + PV+QC GH+ C++C K++N CP P+ + R R +E++LESV V C+ A+ GC + + Y ++ HEK C SPCSCP+ GC++ GS LY+H+ H S +
Sbjct: 27 KRVDKTRSAMLT--DLDILDCPICYQALKIPVFQCGNGHLACSSCCPKLRNK-CPACALPVGHIRCRAMERVLESVL-VPCRYADLGCTKTIYYGRESTHEKICNFSPCSCPVQGCNYTGSYKDLYEHYDLTHSTGSTAY 162
BLAST of eg_v1.0.alternate_g25615.t1 vs. Araport11
Match: AT5G37910.1 (| Protein with RING/U-box and TRAF-like domain | Chr5:15096210-15097318 REVERSE LENGTH=276 | 201606) HSP 1 Score: 109.768 bits (273), Expect = 7.122e-30 Identity = 53/141 (37.59%), Postives = 80/141 (56.74%), Query Frame = 0 Query: 6 EAPAAKRVCRSGSVSITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNS 146
+ +RV + +I L D D+LDCPIC P++QC+ GH+ C +C K+ N CP P+ ++R+R +E +LES+ + C N GC + Y +++ HEK C S CSCP S CD+ GS LY H++ H +
Sbjct: 13 QGDGGERVAKRQRSAIVLLDLDILDCPICCEALTSPIFQCDNGHLACGSCCPKLSNK-CPACTLPVGHSRSRAMESVLESIL-IPCPNVRFGCTKSFFYGKESAHEKECIFSQCSCPSSVCDYTGSYKDLYAHYKLTHSTN 151
BLAST of eg_v1.0.alternate_g25615.t1 vs. Araport11
Match: AT1G66630.1 (| Protein with RING/U-box and TRAF-like domain | Chr1:24855479-24856714 REVERSE LENGTH=303 | 201606) HSP 1 Score: 109.768 bits (273), Expect = 1.151e-29 Identity = 52/134 (38.81%), Postives = 85/134 (63.43%), Query Frame = 0 Query: 20 SITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKND--HEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSVLFR 151
S TL + D+LDCPIC+ P+YQC+ GH+ C++C K+K CP+ I + R+R++EK++E+V VSC NA++GC E + Y +++ HE+ C+ + C CP C + G + LY+H+ A+H+ F+
Sbjct: 38 SATLLELDLLDCPICYHKLGAPIYQCDNGHIACSSCCKKVKY-KCPYCSLRIGFFRSRILEKIVEAV-VVSCPNAKYGCTEKIPYDNESESAHERVCEFTLCYCPEPECKYTGVYTDLYRHYHAEHKTDHSWFK 169
BLAST of eg_v1.0.alternate_g25615.t1 vs. Araport11
Match: AT1G66620.1 (| Protein with RING/U-box and TRAF-like domain | Chr1:24852806-24854044 REVERSE LENGTH=313 | 201606) HSP 1 Score: 108.227 bits (269), Expect = 6.851e-29 Identity = 55/144 (38.19%), Postives = 83/144 (57.64%), Query Frame = 0 Query: 3 EEHEAPAAKRVCRSGSVSITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNS 146
E E V RSG TL + D+LDCPIC P++QC+ GH+ C++C +K++N CP PI R+R++E+++E+V V+C N +HGC E Y ++ HEK C+ + C CP C++ G LY HF H ++
Sbjct: 20 ESVENGGGDAVARSG----TLFELDLLDCPICCHALTSPIFQCDNGHIACSSCCTKLRNK-CPSCALPIGNFRSRIMERVVEAVM-VTCPNVKHGCTEKFSYGKELIHEKDCRFALCYCPAPNCNYSGVYKDLYSHFYVNHYDT 157
BLAST of eg_v1.0.alternate_g25615.t1 vs. Araport11
Match: AT1G66650.1 (| Protein with RING/U-box and TRAF-like domain | Chr1:24860113-24861821 REVERSE LENGTH=329 | 201606) HSP 1 Score: 108.227 bits (269), Expect = 6.895e-29 Identity = 58/140 (41.43%), Postives = 82/140 (58.57%), Query Frame = 0 Query: 12 RVCRSGSVS----ITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEK-NDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNS 146
R CR VS +TL +S+VL+CP CF P + P++QC GH+ C C K+K C F + PI R R +EK++++ VSC NA +GC + Y + HEK C +PCSCP+ C+++G L HFRA H+ S
Sbjct: 63 RTCRKRRVSSPKSVTLPNSNVLECPNCFDPLKKPIFQCNNGHLACFLCCIKLKK-RCSFCKLPIGDVRCRAMEKVIKA-GLVSCSNAIYGCKQSTTYGNQLQSHEKVCVFAPCSCPIKDCNYIGFYKDLINHFRATHKVS 200
BLAST of eg_v1.0.alternate_g25615.t1 vs. Araport11
Match: AT5G37890.1 (| Protein with RING/U-box and TRAF-like domain | Chr5:15090512-15091822 REVERSE LENGTH=286 | 201606) HSP 1 Score: 106.686 bits (265), Expect = 1.219e-28 Identity = 54/136 (39.71%), Postives = 81/136 (59.56%), Query Frame = 0 Query: 9 AAKRVCRSGSVSITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQ 144
AAKR + S L D ++LDCPIC+ F P++QC+ GH+ C++C K+ N+ CP SP+ + R R +E +LES+ + C NA+ GC + + Y ++ HEK C S C+CP C++ S LY H+R H
Sbjct: 31 AAKRDAKKRST--MLMDLEILDCPICYEAFTIPIFQCDNGHLACSSCCPKL-NNKCPACTSPVGHNRCRAMESVLESIL-IPCPNAKLGCKKNVSYGKELTHEKECMFSHCACPALDCNYTSSYKDLYTHYRITHM 162
BLAST of eg_v1.0.alternate_g25615.t1 vs. Araport11
Match: AT5G62800.2 (| Protein with RING/U-box and TRAF-like domain | Chr5:25218663-25219967 FORWARD LENGTH=314 | 201606) HSP 1 Score: 104.76 bits (260), Expect = 1.258e-27 Identity = 57/144 (39.58%), Postives = 82/144 (56.94%), Query Frame = 0 Query: 8 PAAKRVCRSGSVSITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFD--RSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSVL 149
P K+ + + S L D DVLDCP+CF P P +QC+ GH+VC C +K+ N CP PI R +E++LES V C+N E GC + + Y + + HEK C +S CSCP C++ GS + +Y HF +H +S +
Sbjct: 20 PQKKQRMENETRSAKLLDLDVLDCPVCFEPLTIPTFQCDDGHIVCNFCFAKVSN-KCPGPGCDLPIGNKRCFAMERVLESA-FVPCQNTEFGCTKSVSYEKVSSHEKECNYSQCSCPNLECNYTGSYNIIYGHFMRRHLYNSTI 161
BLAST of eg_v1.0.alternate_g25615.t1 vs. Araport11
Match: AT5G62800.1 (| Protein with RING/U-box and TRAF-like domain | Chr5:25218663-25219967 FORWARD LENGTH=348 | 201606) HSP 1 Score: 104.76 bits (260), Expect = 2.303e-27 Identity = 57/144 (39.58%), Postives = 82/144 (56.94%), Query Frame = 0 Query: 8 PAAKRVCRSGSVSITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFD--RSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQHFRAQHQNSSVL 149
P K+ + + S L D DVLDCP+CF P P +QC+ GH+VC C +K+ N CP PI R +E++LES V C+N E GC + + Y + + HEK C +S CSCP C++ GS + +Y HF +H +S +
Sbjct: 20 PQKKQRMENETRSAKLLDLDVLDCPVCFEPLTIPTFQCDDGHIVCNFCFAKVSN-KCPGPGCDLPIGNKRCFAMERVLESA-FVPCQNTEFGCTKSVSYEKVSSHEKECNYSQCSCPNLECNYTGSYNIIYGHFMRRHLYNSTI 161
BLAST of eg_v1.0.alternate_g25615.t1 vs. Araport11
Match: AT1G66660.2 (| Protein with RING/U-box and TRAF-like domain | Chr1:24862056-24863332 REVERSE LENGTH=348 | 201606) HSP 1 Score: 103.605 bits (257), Expect = 4.820e-27 Identity = 53/118 (44.92%), Postives = 71/118 (60.17%), Query Frame = 0 Query: 21 ITLADSDVLDCPICFGPFRPPVYQCEKGHMVCTTCQSKIKNDSCPFDRSPIAYTRNRVIEKLLESVKSVSCKNAEHGCNEMLGYLEKNDHEKACKHSPCSCPLSGCDFLGSSSQLYQH 138
+ L SDVLDCP C P + P+YQC GH+ C++C K+ N C F R I R R +EK++E+ V C NA+HGC E Y ++ HEK CK CSCP+S C+++ S S L H
Sbjct: 96 VKLQSSDVLDCPTCCEPLKRPIYQCSNGHLACSSCCQKL-NKKCSFCRCNIGDIRCRAMEKVIEA-SIVPCPNAKHGCKETTTYCNQSSHEKVCKFVRCSCPVSNCNYVSSYSNLKSH 211 The following BLAST results are available for this feature:
BLAST of eg_v1.0.alternate_g25615.t1 vs. ExPASy TrEMBL
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of eg_v1.0.alternate_g25615.t1 vs. ExPASy Swiss-Prot
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of eg_v1.0.alternate_g25615.t1 vs. Araport11
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus glauca CRC3463 v1.0 v1.0 proteins
Date Performed: 2024-01-20 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >eg_v1.0.alternate_g25615.t1-ucr_v1 ID=eg_v1.0.alternate_g25615.t1-ucr_v1; Name=eg_v1.0.alternate_g25615.t1; organism=Citrus glauca; type=mRNA; length=732bpback to top protein sequence of eg_v1.0.alternate_g25615.t1-ucr_v1 >eg_v1.0.alternate_g25615.t1-ucr_v1 ID=eg_v1.0.alternate_g25615.t1-ucr_v1; Name=eg_v1.0.alternate_g25615.t1-ucr_v1; organism=Citrus glauca; type=polypeptide; length=151bpback to top mRNA from alignment at Alt_Scaffold_6:30844958..30848413- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=3456bp; location=Sequence derived from: Alt_Scaffold_6:30844958..30848413- (Citrus glaucaback to top Coding sequence (CDS) from alignment at Alt_Scaffold_6:30844958..30848413- >eg_v1.0.alternate_g25615.t1-ucr_v1 ID=eg_v1.0.alternate_g25615.t1-ucr_v1; Name=eg_v1.0.alternate_g25615.t1; organism=Citrus glauca; type=CDS; length=455bp; location=Sequence derived from: Alt_Scaffold_6:30844958..30848413- (Citrus glaucaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|