eg_v1.0.alternate_g607.t1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of eg_v1.0.alternate_g607.t1 vs. ExPASy TrEMBL
Match: V4UD15|V4UD15_CITCL (Uncharacterized protein (Fragment) OS=Citrus clementina OX=85681 GN=CICLE_v10010663mg PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.151e-44 Identity = 71/76 (93.42%), Postives = 73/76 (96.05%), Query Frame = 0 Query: 1 MAPKLPNTDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALKAA 76
+APKLPNTDLFVGLNKGHVVTKKELPPRPAN KGKTSKRVHFERNVIREVAGF PYEKTI EL+KVDEDKRALKAA
Sbjct: 38 IAPKLPNTDLFVGLNKGHVVTKKELPPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVDEDKRALKAA 113
BLAST of eg_v1.0.alternate_g607.t1 vs. ExPASy TrEMBL
Match: A0A067GWZ9|A0A067GWZ9_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g041684mg PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 5.073e-43 Identity = 70/76 (92.11%), Postives = 72/76 (94.74%), Query Frame = 0 Query: 1 MAPKLPNTDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALKAA 76
+APKLPNTDLFVGLNKGHVVTKKEL PRPAN KGKTSKRVHFERNVIREVAGF PYEKTI EL+KVDEDKRALKAA
Sbjct: 2 IAPKLPNTDLFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREVAGFTPYEKTITELLKVDEDKRALKAA 77
BLAST of eg_v1.0.alternate_g607.t1 vs. ExPASy TrEMBL
Match: A0A2H5P7Q3|A0A2H5P7Q3_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_111020 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 5.962e-42 Identity = 69/76 (90.79%), Postives = 71/76 (93.42%), Query Frame = 0 Query: 1 MAPKLPNTDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALKAA 76
+APKLPNTDLFVGLNKGHVVTKKEL PRPAN KGKTSKRVHFERNVIRE AGF PYEKTI EL+KVDEDKRALKAA
Sbjct: 46 IAPKLPNTDLFVGLNKGHVVTKKELLPRPANRKGKTSKRVHFERNVIREFAGFTPYEKTITELLKVDEDKRALKAA 121
BLAST of eg_v1.0.alternate_g607.t1 vs. ExPASy TrEMBL
Match: A0A2H5QP27|A0A2H5QP27_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_248310 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.732e-39 Identity = 64/76 (84.21%), Postives = 69/76 (90.79%), Query Frame = 0 Query: 1 MAPKLPNTDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALKAA 76
MAPK PNT LFVGLNKGH+VTKKELPPRPA+HKGKTSKRVHF R VIREVAGFAPYEK I+EL+KV +DKRALK A
Sbjct: 28 MAPKQPNTGLFVGLNKGHIVTKKELPPRPADHKGKTSKRVHFVRTVIREVAGFAPYEKMIIELLKVGKDKRALKVA 103
BLAST of eg_v1.0.alternate_g607.t1 vs. ExPASy TrEMBL
Match: A5ATP3|A5ATP3_VITVI (60S ribosomal protein L36 OS=Vitis vinifera OX=29760 GN=VITISV_013224 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 8.796e-38 Identity = 63/76 (82.89%), Postives = 68/76 (89.47%), Query Frame = 0 Query: 1 MAPKLPNTDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALKAA 76
MAPK PNT LFVGLNKGHVVTKKELPPRP++ KGKTSKRVHF RN+IREVAGFAPYEK I EL+KV +DKRALK A
Sbjct: 1 MAPKQPNTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNIIREVAGFAPYEKRITELLKVGKDKRALKVA 76
BLAST of eg_v1.0.alternate_g607.t1 vs. ExPASy TrEMBL
Match: A0A438JMA7|A0A438JMA7_VITVI (60S ribosomal protein L36 OS=Vitis vinifera OX=29760 GN=RPL36C_1 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 8.796e-38 Identity = 63/76 (82.89%), Postives = 68/76 (89.47%), Query Frame = 0 Query: 1 MAPKLPNTDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALKAA 76
MAPK PNT LFVGLNKGHVVTKKELPPRP++ KGKTSKRVHF RN+IREVAGFAPYEK I EL+KV +DKRALK A
Sbjct: 1 MAPKQPNTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNIIREVAGFAPYEKRITELLKVGKDKRALKVA 76
BLAST of eg_v1.0.alternate_g607.t1 vs. ExPASy TrEMBL
Match: A0A5N6PTE5|A0A5N6PTE5_9ASTR (60S ribosomal protein L36 OS=Mikania micrantha OX=192012 GN=E3N88_07341 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.027e-37 Identity = 63/76 (82.89%), Postives = 68/76 (89.47%), Query Frame = 0 Query: 1 MAPKLPNTDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALKAA 76
MAPK PNT LFVGLNKGHVVTKKELPPRP++ KGKTSKRVHF RN+IREVAGFAPYEK I EL+KV +DKRALK A
Sbjct: 1 MAPKQPNTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVA 76
BLAST of eg_v1.0.alternate_g607.t1 vs. ExPASy TrEMBL
Match: E0CV06|E0CV06_VITVI (60S ribosomal protein L36 OS=Vitis vinifera OX=29760 GN=VIT_16s0050g00610 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.875e-37 Identity = 62/76 (81.58%), Postives = 68/76 (89.47%), Query Frame = 0 Query: 1 MAPKLPNTDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALKAA 76
MAPK PNT LFVGLNKGH+VTKKELPPRP++ KGKTSKRVHF RN+IREVAGFAPYEK I EL+KV +DKRALK A
Sbjct: 1 MAPKQPNTGLFVGLNKGHIVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVA 76
BLAST of eg_v1.0.alternate_g607.t1 vs. ExPASy TrEMBL
Match: A0A438E2N0|A0A438E2N0_VITVI (60S ribosomal protein L36 OS=Vitis vinifera OX=29760 GN=RPL36C_2 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.875e-37 Identity = 62/76 (81.58%), Postives = 68/76 (89.47%), Query Frame = 0 Query: 1 MAPKLPNTDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALKAA 76
MAPK PNT LFVGLNKGH+VTKKELPPRP++ KGKTSKRVHF RN+IREVAGFAPYEK I EL+KV +DKRALK A
Sbjct: 1 MAPKQPNTGLFVGLNKGHIVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVA 76
BLAST of eg_v1.0.alternate_g607.t1 vs. ExPASy TrEMBL
Match: A0A067EA98|A0A067EA98_CITSI (60S ribosomal protein L36 OS=Citrus sinensis OX=2711 GN=CISIN_1g033549mg PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 4.228e-37 Identity = 63/76 (82.89%), Postives = 67/76 (88.16%), Query Frame = 0 Query: 1 MAPKLPNTDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALKAA 76
MAPK PNT LFVGLNKGH+VTKKELPPRPA+ KGKTSKRVHF R VIREVAGFAPYEK I EL+KV +DKRALK A
Sbjct: 8 MAPKQPNTGLFVGLNKGHIVTKKELPPRPADRKGKTSKRVHFVRTVIREVAGFAPYEKRITELLKVGKDKRALKVA 83
BLAST of eg_v1.0.alternate_g607.t1 vs. ExPASy Swiss-Prot
Match: RL36_DAUCA (60S ribosomal protein L36 OS=Daucus carota OX=4039 GN=RPL36 PE=3 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 2.046e-36 Identity = 58/74 (78.38%), Postives = 64/74 (86.49%), Query Frame = 0 Query: 1 MAPKLPNTDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALK 74
MAPK PNT LFVGLNKGH+VTKKEL PRP++ KGKTSKR HF RN+IREVAGF PYEK I EL+KV +DKRALK
Sbjct: 1 MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRITELLKVGKDKRALK 74
BLAST of eg_v1.0.alternate_g607.t1 vs. ExPASy Swiss-Prot
Match: RL363_ARATH (60S ribosomal protein L36-3 OS=Arabidopsis thaliana OX=3702 GN=RPL36C PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.005e-30 Identity = 52/69 (75.36%), Postives = 57/69 (82.61%), Query Frame = 0 Query: 8 TDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALKAA 76
T LFVGLNKGHVVTK+E PPRP N KGKTSKR F RN+I+EVAG APYEK I EL+KV +DKRALK A
Sbjct: 4 TGLFVGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVA 72
BLAST of eg_v1.0.alternate_g607.t1 vs. ExPASy Swiss-Prot
Match: RL361_ARATH (60S ribosomal protein L36-1 OS=Arabidopsis thaliana OX=3702 GN=RPL36A PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 5.881e-29 Identity = 50/69 (72.46%), Postives = 56/69 (81.16%), Query Frame = 0 Query: 8 TDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALKAA 76
T LFVGLNKGHVVT++EL PRP + KGKTSKR F R +IREVAG APYEK I EL+KV +DKRALK A
Sbjct: 8 TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVGKDKRALKVA 76
BLAST of eg_v1.0.alternate_g607.t1 vs. ExPASy Swiss-Prot
Match: RL362_ARATH (60S ribosomal protein L36-2 OS=Arabidopsis thaliana OX=3702 GN=RPL36B PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 7.116e-29 Identity = 50/69 (72.46%), Postives = 57/69 (82.61%), Query Frame = 0 Query: 8 TDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALKAA 76
T LFVGLNKGHVVT++EL PRP + KGKTSKR F RN+I+EVAG APYEK I EL+KV +DKRALK A
Sbjct: 8 TGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVA 76
BLAST of eg_v1.0.alternate_g607.t1 vs. ExPASy Swiss-Prot
Match: RL36A_SCHPO (60S ribosomal protein L36-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl3601 PE=3 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 7.140e-25 Identity = 44/76 (57.89%), Postives = 56/76 (73.68%), Query Frame = 0 Query: 1 MAPKLPNTDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALKAA 76
MAP L VGLNKG V+TK++LP RP+ KG+ SKR F R+++REVAGFAPYE+ +MELI+ +DKRA K A
Sbjct: 1 MAP-----GLVVGLNKGKVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLA 71
BLAST of eg_v1.0.alternate_g607.t1 vs. ExPASy Swiss-Prot
Match: RL36B_SCHPO (60S ribosomal protein L36-B OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl3602 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.397e-23 Identity = 43/76 (56.58%), Postives = 54/76 (71.05%), Query Frame = 0 Query: 1 MAPKLPNTDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALKAA 76
MAP L VGLNKG +TK++LP RP+ KG SKR F R+++REVAGFAPYE+ +MELI+ +DKRA K A
Sbjct: 1 MAP-----GLVVGLNKGKTLTKRQLPERPSRRKGHLSKRTAFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLA 71
BLAST of eg_v1.0.alternate_g607.t1 vs. ExPASy Swiss-Prot
Match: RL36_ULVCO (60S ribosomal protein L36 OS=Ulva compressa OX=63659 GN=RL36 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.597e-22 Identity = 41/66 (62.12%), Postives = 51/66 (77.27%), Query Frame = 0 Query: 9 DLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALK 74
++ VGLNKGH VTKK PRP+ KG S+RV R V+REVAG+APYE+ +MEL+KV +DKRALK
Sbjct: 3 EIAVGLNKGHQVTKKAGTPRPSRRKGFLSQRVKKVRAVVREVAGWAPYERRVMELLKVGKDKRALK 68
BLAST of eg_v1.0.alternate_g607.t1 vs. ExPASy Swiss-Prot
Match: RL36_IXOSC (60S ribosomal protein L36 OS=Ixodes scapularis OX=6945 GN=RpL36 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 7.634e-21 Identity = 40/65 (61.54%), Postives = 47/65 (72.31%), Query Frame = 0 Query: 10 LFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALK 74
L VGL KGH VTK E PRP+ KG SK F R++IREV GFAP+E+ MEL+KV +DKRALK
Sbjct: 7 LAVGLGKGHKVTKNEYKPRPSRRKGALSKHTRFVRDLIREVCGFAPFERRAMELLKVSKDKRALK 71
BLAST of eg_v1.0.alternate_g607.t1 vs. ExPASy Swiss-Prot
Match: RL36_XENTR (60S ribosomal protein L36 OS=Xenopus tropicalis OX=8364 GN=rpl36 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.976e-19 Identity = 40/74 (54.05%), Postives = 50/74 (67.57%), Query Frame = 0 Query: 1 MAPKLPNTDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALK 74
MA + P + VGLNKGH VTK PR +G+ +K F R++IREV GFAPYE+ MEL+KV +DKRALK
Sbjct: 1 MAIRYP---MAVGLNKGHRVTKNVTKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALK 71
BLAST of eg_v1.0.alternate_g607.t1 vs. ExPASy Swiss-Prot
Match: RL36_XENLA (60S ribosomal protein L36 OS=Xenopus laevis OX=8355 GN=rpl36 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.976e-19 Identity = 40/74 (54.05%), Postives = 50/74 (67.57%), Query Frame = 0 Query: 1 MAPKLPNTDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALK 74
MA + P + VGLNKGH VTK PR +G+ +K F R++IREV GFAPYE+ MEL+KV +DKRALK
Sbjct: 1 MAIRYP---MAVGLNKGHRVTKNVTKPRHCRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALK 71
BLAST of eg_v1.0.alternate_g607.t1 vs. Araport11
Match: AT5G02450.1 (| Ribosomal protein L36e family protein | Chr5:533501-534394 FORWARD LENGTH=108 | 201606) HSP 1 Score: 104.76 bits (260), Expect = 5.121e-31 Identity = 52/69 (75.36%), Postives = 57/69 (82.61%), Query Frame = 0 Query: 8 TDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALKAA 76
T LFVGLNKGHVVTK+E PPRP N KGKTSKR F RN+I+EVAG APYEK I EL+KV +DKRALK A
Sbjct: 4 TGLFVGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVA 72
BLAST of eg_v1.0.alternate_g607.t1 vs. Araport11
Match: AT2G37600.2 (| Ribosomal protein L36e family protein | Chr2:15774410-15775203 REVERSE LENGTH=113 | 201606) HSP 1 Score: 102.449 bits (254), Expect = 6.017e-30 Identity = 50/69 (72.46%), Postives = 56/69 (81.16%), Query Frame = 0 Query: 8 TDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALKAA 76
T LFVGLNKGHVVT++EL PRP + KGKTSKR F R +IREVAG APYEK I EL+KV +DKRALK A
Sbjct: 8 TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVGKDKRALKVA 76
BLAST of eg_v1.0.alternate_g607.t1 vs. Araport11
Match: AT2G37600.1 (| Ribosomal protein L36e family protein | Chr2:15774410-15775203 REVERSE LENGTH=113 | 201606) HSP 1 Score: 102.449 bits (254), Expect = 6.017e-30 Identity = 50/69 (72.46%), Postives = 56/69 (81.16%), Query Frame = 0 Query: 8 TDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALKAA 76
T LFVGLNKGHVVT++EL PRP + KGKTSKR F R +IREVAG APYEK I EL+KV +DKRALK A
Sbjct: 8 TGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVGKDKRALKVA 76
BLAST of eg_v1.0.alternate_g607.t1 vs. Araport11
Match: AT3G53740.4 (| Ribosomal protein L36e family protein | Chr3:19913921-19914813 REVERSE LENGTH=112 | 201606) HSP 1 Score: 102.064 bits (253), Expect = 7.280e-30 Identity = 50/69 (72.46%), Postives = 57/69 (82.61%), Query Frame = 0 Query: 8 TDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALKAA 76
T LFVGLNKGHVVT++EL PRP + KGKTSKR F RN+I+EVAG APYEK I EL+KV +DKRALK A
Sbjct: 8 TGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVA 76
BLAST of eg_v1.0.alternate_g607.t1 vs. Araport11
Match: AT3G53740.3 (| Ribosomal protein L36e family protein | Chr3:19913921-19914813 REVERSE LENGTH=112 | 201606) HSP 1 Score: 102.064 bits (253), Expect = 7.280e-30 Identity = 50/69 (72.46%), Postives = 57/69 (82.61%), Query Frame = 0 Query: 8 TDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALKAA 76
T LFVGLNKGHVVT++EL PRP + KGKTSKR F RN+I+EVAG APYEK I EL+KV +DKRALK A
Sbjct: 8 TGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVA 76
BLAST of eg_v1.0.alternate_g607.t1 vs. Araport11
Match: AT3G53740.2 (| Ribosomal protein L36e family protein | Chr3:19913921-19914813 REVERSE LENGTH=112 | 201606) HSP 1 Score: 102.064 bits (253), Expect = 7.280e-30 Identity = 50/69 (72.46%), Postives = 57/69 (82.61%), Query Frame = 0 Query: 8 TDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDKRALKAA 76
T LFVGLNKGHVVT++EL PRP + KGKTSKR F RN+I+EVAG APYEK I EL+KV +DKRALK A
Sbjct: 8 TGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVGKDKRALKVA 76
BLAST of eg_v1.0.alternate_g607.t1 vs. Araport11
Match: AT3G53740.1 (| Ribosomal protein L36e family protein | Chr3:19913921-19914813 REVERSE LENGTH=103 | 201606) HSP 1 Score: 90.1225 bits (222), Expect = 2.632e-25 Identity = 44/63 (69.84%), Postives = 51/63 (80.95%), Query Frame = 0 Query: 8 TDLFVGLNKGHVVTKKELPPRPANHKGKTSKRVHFERNVIREVAGFAPYEKTIMELIKVDEDK 70
T LFVGLNKGHVVT++EL PRP + KGKTSKR F RN+I+EVAG APYEK I EL+KV + K
Sbjct: 8 TGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVAKRK 70 The following BLAST results are available for this feature:
BLAST of eg_v1.0.alternate_g607.t1 vs. ExPASy TrEMBL
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of eg_v1.0.alternate_g607.t1 vs. ExPASy Swiss-Prot
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of eg_v1.0.alternate_g607.t1 vs. Araport11
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs Araport11) Total hits: 7 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus glauca CRC3463 v1.0 v1.0 proteins
Date Performed: 2024-01-20 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >eg_v1.0.alternate_g607.t1-ucr_v1 ID=eg_v1.0.alternate_g607.t1-ucr_v1; Name=eg_v1.0.alternate_g607.t1; organism=Citrus glauca; type=mRNA; length=231bpback to top protein sequence of eg_v1.0.alternate_g607.t1-ucr_v1 >eg_v1.0.alternate_g607.t1-ucr_v1 ID=eg_v1.0.alternate_g607.t1-ucr_v1; Name=eg_v1.0.alternate_g607.t1-ucr_v1; organism=Citrus glauca; type=polypeptide; length=76bpback to top mRNA from alignment at Alt_Scaffold_1:4569957..4570187- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=231bp; location=Sequence derived from: Alt_Scaffold_1:4569957..4570187- (Citrus glaucaback to top Coding sequence (CDS) from alignment at Alt_Scaffold_1:4569957..4570187- >eg_v1.0.alternate_g607.t1-ucr_v1 ID=eg_v1.0.alternate_g607.t1-ucr_v1; Name=eg_v1.0.alternate_g607.t1; organism=Citrus glauca; type=CDS; length=231bp; location=Sequence derived from: Alt_Scaffold_1:4569957..4570187- (Citrus glaucaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|