eg_v1.0.alternate_g618.t1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of eg_v1.0.alternate_g618.t1 vs. ExPASy TrEMBL
Match: A0A2H5P7P4|A0A2H5P7P4_CITUN (Aminoacyl-tRNA hydrolase OS=Citrus unshiu OX=55188 GN=CUMW_110920 PE=4 SV=1) HSP 1 Score: 394.815 bits (1013), Expect = 1.195e-138 Identity = 193/195 (98.97%), Postives = 193/195 (98.97%), Query Frame = 0 Query: 1 MWASQQNSSQLSNKKQQKQEKVSLAVSFRPENFIPGLVIGFIFGMLLDLSKPAKNYVKKKNFLPRKLQEQVSVSSDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195 MWASQQNSSQLSNKKQQKQEKVSLAVSFRPENFIPGLVIGFIFGMLLDLSKP KNYVKKKNFLPRK QEQVSVSSDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL Sbjct: 1 MWASQQNSSQLSNKKQQKQEKVSLAVSFRPENFIPGLVIGFIFGMLLDLSKPGKNYVKKKNFLPRKPQEQVSVSSDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
BLAST of eg_v1.0.alternate_g618.t1 vs. ExPASy TrEMBL
Match: V4UD07|V4UD07_CITCL (Aminoacyl-tRNA hydrolase OS=Citrus clementina OX=85681 GN=CICLE_v10009570mg PE=4 SV=1) HSP 1 Score: 394.045 bits (1011), Expect = 2.360e-138 Identity = 192/195 (98.46%), Postives = 193/195 (98.97%), Query Frame = 0 Query: 1 MWASQQNSSQLSNKKQQKQEKVSLAVSFRPENFIPGLVIGFIFGMLLDLSKPAKNYVKKKNFLPRKLQEQVSVSSDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195 MWASQQNSSQLSNKKQQKQEKVSLAVSFRPENFIPGLVIGFIFGMLLDLSKP KNYV+KKNFLPRK QEQVSVSSDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL Sbjct: 1 MWASQQNSSQLSNKKQQKQEKVSLAVSFRPENFIPGLVIGFIFGMLLDLSKPGKNYVRKKNFLPRKPQEQVSVSSDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
BLAST of eg_v1.0.alternate_g618.t1 vs. ExPASy TrEMBL
Match: A0A067GME2|A0A067GME2_CITSI (Aminoacyl-tRNA hydrolase OS=Citrus sinensis OX=2711 GN=CISIN_1g029323mg PE=4 SV=1) HSP 1 Score: 393.66 bits (1010), Expect = 4.362e-138 Identity = 192/195 (98.46%), Postives = 192/195 (98.46%), Query Frame = 0 Query: 1 MWASQQNSSQLSNKKQQKQEKVSLAVSFRPENFIPGLVIGFIFGMLLDLSKPAKNYVKKKNFLPRKLQEQVSVSSDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195 MWASQQNSSQLSNKKQQKQEKVSLAVSFRPENFIPGLVIGFIFGMLLDLSKP KNYVKKKNFLPRK QEQVSVSSDGDQDLKL LVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL Sbjct: 1 MWASQQNSSQLSNKKQQKQEKVSLAVSFRPENFIPGLVIGFIFGMLLDLSKPGKNYVKKKNFLPRKPQEQVSVSSDGDQDLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195
BLAST of eg_v1.0.alternate_g618.t1 vs. ExPASy TrEMBL
Match: A0A067GWY6|A0A067GWY6_CITSI (Aminoacyl-tRNA hydrolase OS=Citrus sinensis OX=2711 GN=CISIN_1g029323mg PE=4 SV=1) HSP 1 Score: 387.111 bits (993), Expect = 1.351e-135 Identity = 191/195 (97.95%), Postives = 191/195 (97.95%), Query Frame = 0 Query: 1 MWASQQNSSQLSNKKQQKQEKVSLAVSFRPENFIPGLVIGFIFGMLLDLSKPAKNYVKKKNFLPRKLQEQVSVSSDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195 MWASQQNSSQLSNK QQKQEKVSLAVSFRPENFIPGLVIGFIFGMLLDLSKP KNYVKKKNFLPRK QEQVSVSSDGDQDLKL LVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL Sbjct: 1 MWASQQNSSQLSNK-QQKQEKVSLAVSFRPENFIPGLVIGFIFGMLLDLSKPGKNYVKKKNFLPRKPQEQVSVSSDGDQDLKLALVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 194
BLAST of eg_v1.0.alternate_g618.t1 vs. ExPASy TrEMBL
Match: A0A5C7HZ03|A0A5C7HZ03_9ROSI (Aminoacyl-tRNA hydrolase OS=Acer yangbiense OX=1000413 GN=EZV62_013357 PE=4 SV=1) HSP 1 Score: 315.849 bits (808), Expect = 2.350e-107 Identity = 158/197 (80.20%), Postives = 171/197 (86.80%), Query Frame = 0 Query: 1 MWASQQNSSQ--LSNKKQQKQEKVSLAVSFRPENFIPGLVIGFIFGMLLDLSKPAKNYVKKKNFLPRKLQEQVSVSSDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195 MWAS +NSSQ LSNKK KQEK AV F+PEN IPGLVIGFI GMLLDLSKPAKN +KK+FL + Q+Q SVS +GDQ+LK+VLVVRQDLKMGSGK+ASQCAHAATGMYAELMQSDR LLRKWEQCGQPKIV+TCKNQ EMNKL E AE+ GLPTFVVADAGRTQ+SAGSKTVLAIGPG K VDSVTGKQRLL Sbjct: 1 MWASYRNSSQSQLSNKKPHKQEKEWFAVGFKPENLIPGLVIGFIVGMLLDLSKPAKNLPRKKSFLVGRTQQQCSVSDNGDQELKMVLVVRQDLKMGSGKVASQCAHAATGMYAELMQSDRFLLRKWEQCGQPKIVLTCKNQNEMNKLKEAAESIGLPTFVVADAGRTQISAGSKTVLAIGPGAKESVDSVTGKQRLL 197
BLAST of eg_v1.0.alternate_g618.t1 vs. ExPASy TrEMBL
Match: A0A6A3CWI6|A0A6A3CWI6_HIBSY (Aminoacyl-tRNA hydrolase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00002793pilonHSYRG00361 PE=4 SV=1) HSP 1 Score: 309.301 bits (791), Expect = 1.037e-104 Identity = 156/195 (80.00%), Postives = 163/195 (83.59%), Query Frame = 0 Query: 1 MWASQQNSSQLSNKKQQKQEKVSLAVSFRPENFIPGLVIGFIFGMLLDLSKPAKNYVKKKNFLPRKLQEQVSVSSDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195 MWAS NSSQ SNKK QKQ+ L VSF+PENFIPGLVIGFI G+ DLSKP K KKKNFLP KLQE VSS+ DQ+LKLVLVVRQDLKM SGKIASQCAHAATGMYAELM SDR LLR+WE CGQPKIVVTC+NQQEMNKL E AEN GLPTFVVADAGRTQVSAGSKTVLAIGPG K VDSVTGK LL Sbjct: 1 MWASTPNSSQPSNKKLQKQKNEILGVSFKPENFIPGLVIGFILGLFWDLSKPTKTLSKKKNFLPGKLQEHDLVSSNADQELKLVLVVRQDLKMKSGKIASQCAHAATGMYAELMHSDRSLLRQWEDCGQPKIVVTCRNQQEMNKLREAAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGSKVAVDSVTGKLNLL 195
BLAST of eg_v1.0.alternate_g618.t1 vs. ExPASy TrEMBL
Match: A0A6A3C0V6|A0A6A3C0V6_HIBSY (Aminoacyl-tRNA hydrolase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00013738pilonHSYRG00007 PE=4 SV=1) HSP 1 Score: 308.145 bits (788), Expect = 3.070e-104 Identity = 155/195 (79.49%), Postives = 163/195 (83.59%), Query Frame = 0 Query: 1 MWASQQNSSQLSNKKQQKQEKVSLAVSFRPENFIPGLVIGFIFGMLLDLSKPAKNYVKKKNFLPRKLQEQVSVSSDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195 MWAS NSSQ SNKK QK++ L VSF+PENFIPGLVIGFI G+ DLSKP K KKKNFLP KLQE VSS+ DQ+LKLVLVVRQDLKM SGKIASQCAHAATGMYAELM SDR LLR+WE CGQPKIVVTC+NQQEMNKL E AEN GLPTFVVADAGRTQVSAGSKTVLAIGPG K VDSVTGK LL Sbjct: 1 MWASTPNSSQPSNKKLQKRKNEILGVSFKPENFIPGLVIGFILGLFWDLSKPTKTLSKKKNFLPGKLQEHDLVSSNADQELKLVLVVRQDLKMKSGKIASQCAHAATGMYAELMHSDRSLLRQWEDCGQPKIVVTCRNQQEMNKLREAAENIGLPTFVVADAGRTQVSAGSKTVLAIGPGSKVAVDSVTGKLNLL 195
BLAST of eg_v1.0.alternate_g618.t1 vs. ExPASy TrEMBL
Match: A0A5D2Z3R9|A0A5D2Z3R9_GOSMU (Aminoacyl-tRNA hydrolase OS=Gossypium mustelinum OX=34275 GN=E1A91_A05G049600v1 PE=4 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 9.084e-104 Identity = 151/195 (77.44%), Postives = 165/195 (84.62%), Query Frame = 0 Query: 1 MWASQQNSSQLSNKKQQKQEKVSLAVSFRPENFIPGLVIGFIFGMLLDLSKPAKNYVKKKNFLPRKLQEQVSVSSDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195 MWA +NSSQ SNKK QKQ L VSF+PENFIPGLVIGFI G+ LDLSKP K KKKNFLP KL+E VSS+ DQDLK+VLVVRQDLKM +GKIASQCAHAATG+YAELM SDR LLR+WE CGQPKIVV+C+NQQEMNKL + AE+ GLPTFVVADAGRTQVSAGSKTVLAIGPGPK +VDSVTGK LL Sbjct: 1 MWAPTRNSSQPSNKKLQKQGSALLGVSFKPENFIPGLVIGFILGLFLDLSKPTKTLSKKKNFLPGKLRELDLVSSNADQDLKMVLVVRQDLKMKAGKIASQCAHAATGIYAELMHSDRSLLREWEDCGQPKIVVSCRNQQEMNKLRDAAEDIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKVVVDSVTGKLNLL 195
BLAST of eg_v1.0.alternate_g618.t1 vs. ExPASy TrEMBL
Match: A0A5D2GBH7|A0A5D2GBH7_GOSDA (Aminoacyl-tRNA hydrolase OS=Gossypium darwinii OX=34276 GN=ES288_A05G049500v1 PE=4 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 9.084e-104 Identity = 151/195 (77.44%), Postives = 165/195 (84.62%), Query Frame = 0 Query: 1 MWASQQNSSQLSNKKQQKQEKVSLAVSFRPENFIPGLVIGFIFGMLLDLSKPAKNYVKKKNFLPRKLQEQVSVSSDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195 MWA +NSSQ SNKK QKQ L VSF+PENFIPGLVIGFI G+ LDLSKP K KKKNFLP KL+E VSS+ DQDLK+VLVVRQDLKM +GKIASQCAHAATG+YAELM SDR LLR+WE CGQPKIVV+C+NQQEMNKL + AE+ GLPTFVVADAGRTQVSAGSKTVLAIGPGPK +VDSVTGK LL Sbjct: 1 MWAPTRNSSQPSNKKLQKQGSALLGVSFKPENFIPGLVIGFILGLFLDLSKPTKTLSKKKNFLPGKLRELDLVSSNADQDLKMVLVVRQDLKMKAGKIASQCAHAATGIYAELMHSDRSLLREWEDCGQPKIVVSCRNQQEMNKLRDAAEDIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKVVVDSVTGKLNLL 195
BLAST of eg_v1.0.alternate_g618.t1 vs. ExPASy TrEMBL
Match: A0A5D2QAT3|A0A5D2QAT3_GOSTO (Aminoacyl-tRNA hydrolase OS=Gossypium tomentosum OX=34277 GN=ES332_A05G051200v1 PE=4 SV=1) HSP 1 Score: 306.605 bits (784), Expect = 9.084e-104 Identity = 151/195 (77.44%), Postives = 165/195 (84.62%), Query Frame = 0 Query: 1 MWASQQNSSQLSNKKQQKQEKVSLAVSFRPENFIPGLVIGFIFGMLLDLSKPAKNYVKKKNFLPRKLQEQVSVSSDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195 MWA +NSSQ SNKK QKQ L VSF+PENFIPGLVIGFI G+ LDLSKP K KKKNFLP KL+E VSS+ DQDLK+VLVVRQDLKM +GKIASQCAHAATG+YAELM SDR LLR+WE CGQPKIVV+C+NQQEMNKL + AE+ GLPTFVVADAGRTQVSAGSKTVLAIGPGPK +VDSVTGK LL Sbjct: 1 MWAPTRNSSQPSNKKLQKQGSALLGVSFKPENFIPGLVIGFILGLFLDLSKPTKTLSKKKNFLPGKLRELDLVSSNADQDLKMVLVVRQDLKMKAGKIASQCAHAATGIYAELMHSDRSLLREWEDCGQPKIVVSCRNQQEMNKLRDAAEDIGLPTFVVADAGRTQVSAGSKTVLAIGPGPKVVVDSVTGKLNLL 195
BLAST of eg_v1.0.alternate_g618.t1 vs. ExPASy Swiss-Prot
Match: PTH2_HUMAN (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Homo sapiens OX=9606 GN=PTRH2 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.746e-36 Identity = 68/174 (39.08%), Postives = 100/174 (57.47%), Query Frame = 0 Query: 23 SLAVSFRPENFIPGLVIGFIFGMLLDLS-KPAKNYVKKKNFLPRKLQEQVSVSSDGDQ-DLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 194 SL + + GL +G GM L S + + K + S GD + K++LVVR DLKMG GK+A+QC+HAA Y ++ + + +L++WE CGQPK+VV +++ + L A+ GL ++ DAGRTQ++ GS+TVL IGPGP L+D VTG +L Sbjct: 5 SLVMEYLAHPSTLGLAVGVACGMCLGWSLRVCFGMLPKSKTSKTHTDTESEASILGDSGEYKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPEMLKQWEYCGQPKVVVKAPDEETLIALLAHAKMLGLTVSLIQDAGRTQIAPGSQTVLGIGPGPADLIDKVTGHLKL 178
BLAST of eg_v1.0.alternate_g618.t1 vs. ExPASy Swiss-Prot
Match: PTH2_BOVIN (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Bos taurus OX=9913 GN=PTRH2 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.319e-35 Identity = 66/152 (43.42%), Postives = 96/152 (63.16%), Query Frame = 0 Query: 43 FGMLLDLSKPAKNYVKKKNFLPRKLQEQVSVSSDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 194 FGML K+ V++ N P E + G+ K++LVVR DLKMG GK+A+QC+HAA Y ++ + + LL++WE CGQPK+VV +++ + +L A+ GL ++ DAGRTQ++ GS+TVL IGPGP L+D VTG +L Sbjct: 37 FGML------PKSSVRETN--PDTETEASILGESGE--YKMILVVRNDLKMGKGKVAAQCSHAAVSAYKQIQRRNPELLKEWEYCGQPKVVVKAPDEETLVELLTHAKVLGLTVSLIQDAGRTQIAPGSRTVLGIGPGPADLIDKVTGHLKL 178
BLAST of eg_v1.0.alternate_g618.t1 vs. ExPASy Swiss-Prot
Match: PTH2_MOUSE (Peptidyl-tRNA hydrolase 2, mitochondrial OS=Mus musculus OX=10090 GN=Ptrh2 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.756e-33 Identity = 55/115 (47.83%), Postives = 78/115 (67.83%), Query Frame = 0 Query: 80 DLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRL 194 + K++LVVR DLKMG GK+A+QC+HAA Y + + +L++WE CGQPK+VV ++ + +L A+ GL ++ DAGRTQ+ GS+TVL IGPGP L+D VTG +L Sbjct: 66 EYKMILVVRTDLKMGKGKVAAQCSHAAVSAYKQTQRRSPQVLKEWEYCGQPKVVVKAPDEDTLIQLLTHAKTLGLTVSLIQDAGRTQIEPGSRTVLGIGPGPVELIDEVTGHLKL 180
BLAST of eg_v1.0.alternate_g618.t1 vs. ExPASy Swiss-Prot
Match: PTH2_DROME (Probable peptidyl-tRNA hydrolase 2 OS=Drosophila melanogaster OX=7227 GN=CG1307 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 3.896e-31 Identity = 57/118 (48.31%), Postives = 75/118 (63.56%), Query Frame = 0 Query: 78 DQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195 + + K+VLVVR DLKMG GKIA+QC H A G Y + LLR WE CG KI V +++ E+ + + AE L T ++ DAGRTQ+ A SKTVLA+GP + +D VTG +LL Sbjct: 69 NDNFKMVLVVRNDLKMGKGKIAAQCGHGAVGAYQRAVVRTPRLLRSWENCGCAKIAVRVESEAELMAIKKEAERQQLNTCLIRDAGRTQIEANSKTVLAVGPAAAADIDRVTGHLKLL 186
BLAST of eg_v1.0.alternate_g618.t1 vs. ExPASy Swiss-Prot
Match: PTH_SULTO (Peptidyl-tRNA hydrolase OS=Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) OX=273063 GN=pth PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 4.187e-30 Identity = 56/118 (47.46%), Postives = 75/118 (63.56%), Query Frame = 0 Query: 82 KLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHL----LRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195 K+V+VVR DL MG GKIA+Q AHAA + +++ S L L KW + GQPKIVV + E+NK +E A LPT ++ DAG+TQ+ G+ T + IGP P LVD +TG +LL Sbjct: 4 KMVIVVRTDLDMGKGKIAAQVAHAAVSLVLDILNSSNSLWKEWLYKWLEEGQPKIVVKVPSLDELNKRYEKAIELNLPTTIIQDAGKTQIEPGTITCIGIGPAPVELVDKITGDLKLL 121
BLAST of eg_v1.0.alternate_g618.t1 vs. ExPASy Swiss-Prot
Match: PTH_PYRFU (Peptidyl-tRNA hydrolase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) OX=186497 GN=pth PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.235e-27 Identity = 53/114 (46.49%), Postives = 71/114 (62.28%), Query Frame = 0 Query: 82 KLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195 K V+V R DLK+ GK+A Q AH A E + R W + GQ K+VV +N++E+ KL AE GLPT ++ DAG T++ G+ TVLAIGPGP+ +VD VTG +LL Sbjct: 6 KQVIVARSDLKLSKGKLAVQVAHGAVTAAFEAYKKKREWFEAWFREGQKKVVVKAQNEEELFKLKSEAEKLGLPTALIRDAGLTEIPPGTITVLAIGPGPEEVVDKVTGHLKLL 119
BLAST of eg_v1.0.alternate_g618.t1 vs. ExPASy Swiss-Prot
Match: PTH_SACS2 (Peptidyl-tRNA hydrolase OS=Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) OX=273057 GN=pth PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.356e-27 Identity = 52/119 (43.70%), Postives = 76/119 (63.87%), Query Frame = 0 Query: 81 LKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSD----RHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195 +K+V+VVR D+KMG GKIA+Q AHAA + ++ S+ + L +W GQPKI+V + E+ + AE LP ++ DAG+TQ+ G+ T L IGP P++LVDS+TG +LL Sbjct: 2 IKMVIVVRSDIKMGKGKIAAQVAHAAVTLVVSIINSNNLRWKEWLNEWLHQGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGKTQLEPGTITCLGIGPAPENLVDSITGDLKLL 120
BLAST of eg_v1.0.alternate_g618.t1 vs. ExPASy Swiss-Prot
Match: PTH_METS5 (Peptidyl-tRNA hydrolase OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348 / JCM 9185 / NBRC 15509 / TH2) OX=399549 GN=pth PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 2.157e-27 Identity = 53/117 (45.30%), Postives = 74/117 (63.25%), Query Frame = 0 Query: 81 LKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQ--SDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195 +K+V++VR D+ MG GKIA+Q AHAA + + M S R L W GQPK+VV + +++ + A + GLPT V++DAGRTQV G+ T IGPGP L+D +TG +LL Sbjct: 1 MKMVVMVRTDINMGKGKIAAQVAHAAVSLVLDCMSRSSWRDWLDSWLHEGQPKVVVKVSSLEDLLSRVDKARSQGLPTTVISDAGRTQVEPGTVTCAGIGPGPDDLIDKITGDLKLL 117
BLAST of eg_v1.0.alternate_g618.t1 vs. ExPASy Swiss-Prot
Match: PTH_SULAC (Peptidyl-tRNA hydrolase OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) OX=330779 GN=pth PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.051e-26 Identity = 50/120 (41.67%), Postives = 75/120 (62.50%), Query Frame = 0 Query: 81 LKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSD-----RHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195 +K+ ++VR DL MG GKIA+Q AHAA + E++Q + L W GQPKIV+ KN E+ + + A +GLP ++ DAG+TQ+ G+ T IGPGP+ ++D++TG +LL Sbjct: 1 MKMAVLVRTDLDMGKGKIAAQVAHAAVSLVLEIVQKRSKAEWKEWLEMWINQGQPKIVLKVKNLDELLEKYNKALQSGLPATIIQDAGKTQIEPGTITCAGIGPGPEEMIDNITGDLKLL 120
BLAST of eg_v1.0.alternate_g618.t1 vs. ExPASy Swiss-Prot
Match: PTH_SULIY (Peptidyl-tRNA hydrolase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) OX=439386 GN=pth PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.893e-26 Identity = 51/119 (42.86%), Postives = 76/119 (63.87%), Query Frame = 0 Query: 81 LKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSD----RHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195 +K+V+VVR D+KMG GK+A+Q AHAA + ++ S+ + L +W Q GQPKIVV + E+ + AE LP ++ DAG+TQ+ G+ T L IGP P++L+D +TG +LL Sbjct: 2 VKMVIVVRSDIKMGKGKMAAQVAHAAVTLVISIINSNNSRWKEWLNEWLQQGQPKIVVKANSLDEIILRSKKAETMNLPFSIIEDAGKTQLEPGTITCLGIGPAPENLIDPITGDLKLL 120
BLAST of eg_v1.0.alternate_g618.t1 vs. Araport11
Match: AT4G32900.2 (| Peptidyl-tRNA hydrolase II (PTH2) family protein | Chr4:15878944-15880979 REVERSE LENGTH=193 | 201606) HSP 1 Score: 278.1 bits (710), Expect = 4.738e-96 Identity = 136/196 (69.39%), Postives = 163/196 (83.16%), Query Frame = 0 Query: 1 MWASQQNSSQLSNKKQQKQEKVSLAVSFRPENFIPGLVIGFIFGMLLDLSKPAKNYVKKKNFLPRKLQEQVSVSSDG-DQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195 MW S +NSSQ + +QEK S++VSFR EN IPG+VIGFI GM+LDLS+ + VK+ L K+Q+Q SV +G DQ+LK+VLVVRQDLKM +GKIASQCAHAATGMYAELMQSDR+LLR+WE+ GQPKIVVTCKNQQEMNK+ E AE+ GLPTFVVADAGRT+V+AGS+TVLA+GPGPK LVDS+TG+ LL Sbjct: 1 MWPSSRNSSQ---PQAMRQEKKSISVSFRAENLIPGVVIGFIIGMILDLSQQVTSPVKRSRLLSSKVQKQSSVPGNGKDQELKMVLVVRQDLKMRTGKIASQCAHAATGMYAELMQSDRYLLRRWEENGQPKIVVTCKNQQEMNKITEAAESVGLPTFVVADAGRTEVAAGSRTVLAVGPGPKELVDSITGRLALL 193
BLAST of eg_v1.0.alternate_g618.t1 vs. Araport11
Match: AT4G32900.4 (| Peptidyl-tRNA hydrolase II (PTH2) family protein | Chr4:15879331-15880979 REVERSE LENGTH=168 | 201606) HSP 1 Score: 235.343 bits (599), Expect = 1.957e-79 Identity = 116/168 (69.05%), Postives = 138/168 (82.14%), Query Frame = 0 Query: 1 MWASQQNSSQLSNKKQQKQEKVSLAVSFRPENFIPGLVIGFIFGMLLDLSKPAKNYVKKKNFLPRKLQEQVSVSSDG-DQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQV 167 MW S +NSSQ + +QEK S++VSFR EN IPG+VIGFI GM+LDLS+ + VK+ L K+Q+Q SV +G DQ+LK+VLVVRQDLKM +GKIASQCAHAATGMYAELMQSDR+LLR+WE+ GQPKIVVTCKNQQEMNK+ E AE+ GLPTFVVADAGRT+V Sbjct: 1 MWPSSRNSSQ---PQAMRQEKKSISVSFRAENLIPGVVIGFIIGMILDLSQQVTSPVKRSRLLSSKVQKQSSVPGNGKDQELKMVLVVRQDLKMRTGKIASQCAHAATGMYAELMQSDRYLLRRWEENGQPKIVVTCKNQQEMNKITEAAESVGLPTFVVADAGRTEV 165
BLAST of eg_v1.0.alternate_g618.t1 vs. Araport11
Match: AT4G32900.3 (| Peptidyl-tRNA hydrolase II (PTH2) family protein | Chr4:15879331-15880979 REVERSE LENGTH=168 | 201606) HSP 1 Score: 235.343 bits (599), Expect = 1.957e-79 Identity = 116/168 (69.05%), Postives = 138/168 (82.14%), Query Frame = 0 Query: 1 MWASQQNSSQLSNKKQQKQEKVSLAVSFRPENFIPGLVIGFIFGMLLDLSKPAKNYVKKKNFLPRKLQEQVSVSSDG-DQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQV 167 MW S +NSSQ + +QEK S++VSFR EN IPG+VIGFI GM+LDLS+ + VK+ L K+Q+Q SV +G DQ+LK+VLVVRQDLKM +GKIASQCAHAATGMYAELMQSDR+LLR+WE+ GQPKIVVTCKNQQEMNK+ E AE+ GLPTFVVADAGRT+V Sbjct: 1 MWPSSRNSSQ---PQAMRQEKKSISVSFRAENLIPGVVIGFIIGMILDLSQQVTSPVKRSRLLSSKVQKQSSVPGNGKDQELKMVLVVRQDLKMRTGKIASQCAHAATGMYAELMQSDRYLLRRWEENGQPKIVVTCKNQQEMNKITEAAESVGLPTFVVADAGRTEV 165
BLAST of eg_v1.0.alternate_g618.t1 vs. Araport11
Match: AT4G32900.1 (| Peptidyl-tRNA hydrolase II (PTH2) family protein | Chr4:15879542-15880979 REVERSE LENGTH=140 | 201606) HSP 1 Score: 194.126 bits (492), Expect = 1.073e-63 Identity = 97/143 (67.83%), Postives = 116/143 (81.12%), Query Frame = 0 Query: 1 MWASQQNSSQLSNKKQQKQEKVSLAVSFRPENFIPGLVIGFIFGMLLDLSKPAKNYVKKKNFLPRKLQEQVSVSSDG-DQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEM 142 MW S +NSSQ + +QEK S++VSFR EN IPG+VIGFI GM+LDLS+ + VK+ L K+Q+Q SV +G DQ+LK+VLVVRQDLKM +GKIASQCAHAATGMYAELMQSDR+LLR+WE+ GQPKIVVTCKNQQEM Sbjct: 1 MWPSSRNSSQ---PQAMRQEKKSISVSFRAENLIPGVVIGFIIGMILDLSQQVTSPVKRSRLLSSKVQKQSSVPGNGKDQELKMVLVVRQDLKMRTGKIASQCAHAATGMYAELMQSDRYLLRRWEENGQPKIVVTCKNQQEM 140
BLAST of eg_v1.0.alternate_g618.t1 vs. Araport11
Match: AT5G16870.1 (| Peptidyl-tRNA hydrolase II (PTH2) family protein | Chr5:5546975-5548542 REVERSE LENGTH=169 | 201606) HSP 1 Score: 122.094 bits (305), Expect = 5.078e-35 Identity = 71/164 (43.29%), Postives = 98/164 (59.76%), Query Frame = 0 Query: 33 FIPGLVIGFIFGMLLDLSKPAKNYVKKK-NFLPRKLQEQVSVSSDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195 I G +G+ G SKP V K K ++ +D D K+VLVVR DLKMG GKIA+QC+HA G+Y +L++ L WE+C QPK+VV +++ EM +L E A++ LPT + DAGRTQ++ S+TV+AI GP +VD VTG +LL Sbjct: 9 LIVGAALGYCIGT--RRSKPVVAAVDKDIKTQSSKSPLEIEKLADILDDFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLVRRAPKALDCWEECAQPKVVVKIEDEDEMLELQERAKSLKLPTHITIDAGRTQIAPNSRTVMAI-LGPVEVVDEVTGGLKLL 169
BLAST of eg_v1.0.alternate_g618.t1 vs. Araport11
Match: AT3G03010.3 (| Peptidyl-tRNA hydrolase II (PTH2) family protein | Chr3:678982-680137 REVERSE LENGTH=179 | 201606) HSP 1 Score: 120.553 bits (301), Expect = 3.212e-34 Identity = 59/121 (48.76%), Postives = 83/121 (68.60%), Query Frame = 0 Query: 75 SDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195 +D ++ K+VLVVR DLKMG GKIA+QC+HA G+Y +L+Q L +WE C QPK+VV ++++EM L E A+ LPT + DAG+TQ++ S+TV+AI GP VD VTG +L+ Sbjct: 60 ADFRKNFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLQRAPKALNRWEYCAQPKVVVKIESEEEMLVLQERAKTLKLPTHITIDAGKTQIAPNSRTVMAI-LGPVDNVDEVTGGLKLM 179
BLAST of eg_v1.0.alternate_g618.t1 vs. Araport11
Match: AT3G03010.2 (| Peptidyl-tRNA hydrolase II (PTH2) family protein | Chr3:678982-680137 REVERSE LENGTH=179 | 201606) HSP 1 Score: 120.553 bits (301), Expect = 3.212e-34 Identity = 59/121 (48.76%), Postives = 83/121 (68.60%), Query Frame = 0 Query: 75 SDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195 +D ++ K+VLVVR DLKMG GKIA+QC+HA G+Y +L+Q L +WE C QPK+VV ++++EM L E A+ LPT + DAG+TQ++ S+TV+AI GP VD VTG +L+ Sbjct: 60 ADFRKNFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLQRAPKALNRWEYCAQPKVVVKIESEEEMLVLQERAKTLKLPTHITIDAGKTQIAPNSRTVMAI-LGPVDNVDEVTGGLKLM 179
BLAST of eg_v1.0.alternate_g618.t1 vs. Araport11
Match: AT3G03010.1 (| Peptidyl-tRNA hydrolase II (PTH2) family protein | Chr3:678982-680137 REVERSE LENGTH=179 | 201606) HSP 1 Score: 120.553 bits (301), Expect = 3.212e-34 Identity = 59/121 (48.76%), Postives = 83/121 (68.60%), Query Frame = 0 Query: 75 SDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEMNKLWEVAENTGLPTFVVADAGRTQVSAGSKTVLAIGPGPKSLVDSVTGKQRLL 195 +D ++ K+VLVVR DLKMG GKIA+QC+HA G+Y +L+Q L +WE C QPK+VV ++++EM L E A+ LPT + DAG+TQ++ S+TV+AI GP VD VTG +L+ Sbjct: 60 ADFRKNFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLQRAPKALNRWEYCAQPKVVVKIESEEEMLVLQERAKTLKLPTHITIDAGKTQIAPNSRTVMAI-LGPVDNVDEVTGGLKLM 179
BLAST of eg_v1.0.alternate_g618.t1 vs. Araport11
Match: AT3G03010.5 (| Peptidyl-tRNA hydrolase II (PTH2) family protein | Chr3:679397-680137 REVERSE LENGTH=151 | 201606) HSP 1 Score: 82.8037 bits (203), Expect = 5.810e-20 Identity = 35/68 (51.47%), Postives = 50/68 (73.53%), Query Frame = 0 Query: 75 SDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEM 142 +D ++ K+VLVVR DLKMG GKIA+QC+HA G+Y +L+Q L +WE C QPK+VV ++++EM Sbjct: 60 ADFRKNFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLQRAPKALNRWEYCAQPKVVVKIESEEEM 127
BLAST of eg_v1.0.alternate_g618.t1 vs. Araport11
Match: AT3G03010.4 (| Peptidyl-tRNA hydrolase II (PTH2) family protein | Chr3:679397-680137 REVERSE LENGTH=151 | 201606) HSP 1 Score: 82.8037 bits (203), Expect = 5.810e-20 Identity = 35/68 (51.47%), Postives = 50/68 (73.53%), Query Frame = 0 Query: 75 SDGDQDLKLVLVVRQDLKMGSGKIASQCAHAATGMYAELMQSDRHLLRKWEQCGQPKIVVTCKNQQEM 142 +D ++ K+VLVVR DLKMG GKIA+QC+HA G+Y +L+Q L +WE C QPK+VV ++++EM Sbjct: 60 ADFRKNFKMVLVVRNDLKMGKGKIAAQCSHATLGLYKKLLQRAPKALNRWEYCAQPKVVVKIESEEEM 127 The following BLAST results are available for this feature:
BLAST of eg_v1.0.alternate_g618.t1 vs. ExPASy TrEMBL
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of eg_v1.0.alternate_g618.t1 vs. ExPASy Swiss-Prot
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of eg_v1.0.alternate_g618.t1 vs. Araport11
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus glauca CRC3463 v1.0 v1.0 proteins
Date Performed: 2024-01-20 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >eg_v1.0.alternate_g618.t1-ucr_v1 ID=eg_v1.0.alternate_g618.t1-ucr_v1; Name=eg_v1.0.alternate_g618.t1; organism=Citrus glauca; type=mRNA; length=624bpback to top protein sequence of eg_v1.0.alternate_g618.t1-ucr_v1 >eg_v1.0.alternate_g618.t1-ucr_v1 ID=eg_v1.0.alternate_g618.t1-ucr_v1; Name=eg_v1.0.alternate_g618.t1-ucr_v1; organism=Citrus glauca; type=polypeptide; length=207bpback to top mRNA from alignment at Alt_Scaffold_1:4695049..4697590- Legend: polypeptideexonCDSmRNA Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=2542bp; location=Sequence derived from: Alt_Scaffold_1:4695049..4697590- (Citrus glaucaback to top Coding sequence (CDS) from alignment at Alt_Scaffold_1:4695049..4697590- >eg_v1.0.alternate_g618.t1-ucr_v1 ID=eg_v1.0.alternate_g618.t1-ucr_v1; Name=eg_v1.0.alternate_g618.t1; organism=Citrus glauca; type=CDS; length=624bp; location=Sequence derived from: Alt_Scaffold_1:4695049..4697590- (Citrus glaucaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|