eg_v1.0.alternate_g629.t1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of eg_v1.0.alternate_g629.t1 vs. ExPASy TrEMBL
Match: A0A2H5P7I9|A0A2H5P7I9_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_110790 PE=4 SV=1) HSP 1 Score: 386.341 bits (991), Expect = 3.132e-135 Identity = 194/197 (98.48%), Postives = 195/197 (98.98%), Query Frame = 0 Query: 1 MATESKASVGKVKSSNQASSSKGKPDSSSLNKKKIDSSIKQPPKSSSALTKTEVKSKTTSSSSKTITKTTTKVREKKVFTLPGQKFDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRKQKQVRMGTPNKSPHALSNKPESSQKQQQGSKNGDIKAKRRLSNDADDDDDLILSPKRRKG 197 MATESKASVGKVKSSNQASSSKGKPDSSSLNKKKIDSSIKQPPKSSSALTKTEVKSKTTSSSSKTITKTTTKVREKKVFTLPGQKFDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRKQKQVRMGTPNKSPH LSNKPESSQKQQQGSKNGDIKAKRR+SNDADDDDD ILSPKRRKG Sbjct: 1 MATESKASVGKVKSSNQASSSKGKPDSSSLNKKKIDSSIKQPPKSSSALTKTEVKSKTTSSSSKTITKTTTKVREKKVFTLPGQKFDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRKQKQVRMGTPNKSPHPLSNKPESSQKQQQGSKNGDIKAKRRVSNDADDDDDFILSPKRRKG 197
BLAST of eg_v1.0.alternate_g629.t1 vs. ExPASy TrEMBL
Match: V4UNE5|V4UNE5_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10009557mg PE=4 SV=1) HSP 1 Score: 386.341 bits (991), Expect = 3.132e-135 Identity = 194/197 (98.48%), Postives = 195/197 (98.98%), Query Frame = 0 Query: 1 MATESKASVGKVKSSNQASSSKGKPDSSSLNKKKIDSSIKQPPKSSSALTKTEVKSKTTSSSSKTITKTTTKVREKKVFTLPGQKFDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRKQKQVRMGTPNKSPHALSNKPESSQKQQQGSKNGDIKAKRRLSNDADDDDDLILSPKRRKG 197 MATESKASVGKVKSSNQASSSKGKPDSSSLNKKKIDSSIKQPPKSSSALTKTEVKSKTTSSSSKTITKTTTKVREKKVFTLPGQKFDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRKQKQVRMGTPNKSPH LSNKPESSQKQQQGSKNGDIKAKRR+SNDADDDDD ILSPKRRKG Sbjct: 1 MATESKASVGKVKSSNQASSSKGKPDSSSLNKKKIDSSIKQPPKSSSALTKTEVKSKTTSSSSKTITKTTTKVREKKVFTLPGQKFDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRKQKQVRMGTPNKSPHPLSNKPESSQKQQQGSKNGDIKAKRRVSNDADDDDDFILSPKRRKG 197
BLAST of eg_v1.0.alternate_g629.t1 vs. ExPASy TrEMBL
Match: A0A067GJL6|A0A067GJL6_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g029232mg PE=4 SV=1) HSP 1 Score: 386.341 bits (991), Expect = 3.132e-135 Identity = 194/197 (98.48%), Postives = 195/197 (98.98%), Query Frame = 0 Query: 1 MATESKASVGKVKSSNQASSSKGKPDSSSLNKKKIDSSIKQPPKSSSALTKTEVKSKTTSSSSKTITKTTTKVREKKVFTLPGQKFDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRKQKQVRMGTPNKSPHALSNKPESSQKQQQGSKNGDIKAKRRLSNDADDDDDLILSPKRRKG 197 MATESKASVGKVKSSNQASSSKGKPDSSSLNKKKIDSSIKQPPKSSSALTKTEVKSKTTSSSSKTITKTTTKVREKKVFTLPGQKFDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRKQKQVRMGTPNKSPH LSNKPESSQKQQQGSKNGDIKAKRR+SNDADDDDD ILSPKRRKG Sbjct: 1 MATESKASVGKVKSSNQASSSKGKPDSSSLNKKKIDSSIKQPPKSSSALTKTEVKSKTTSSSSKTITKTTTKVREKKVFTLPGQKFDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRKQKQVRMGTPNKSPHPLSNKPESSQKQQQGSKNGDIKAKRRVSNDADDDDDFILSPKRRKG 197
BLAST of eg_v1.0.alternate_g629.t1 vs. ExPASy TrEMBL
Match: A0A5N6R9Y8|A0A5N6R9Y8_9ROSI (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_013362 PE=4 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 1.319e-92 Identity = 148/202 (73.27%), Postives = 169/202 (83.66%), Query Frame = 0 Query: 1 MATESKASVGKVKSSNQASSSKGKPDSSSLNKKKIDSSIKQPP----KSSSALTKTEVKSKTTSSSSKTIT-KTTTKVREKKVFTLPGQKFDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRKQKQVRMGTPNKSPHALSNKPESSQKQQQGSKNGDIKAKRRLSNDADDDDDLILSPKRRKG 197 M TE+K++V KVK SNQ SSKGK D S++NKKKI+SS KQP KS + TKTEVK KTTS SSKTIT KT TK R KKV+TL GQK+DPPEEREPLRIFYESLS+QIPTSEMAEFWMMEHGLLSPERAKKAYEKKQR+QK++R GTP KS L +KPESSQ+QQQ SKNG +KAK+R+ N++DDDD+ ILSPKRRKG Sbjct: 1 MTTEAKSNVVKVKLSNQDGSSKGKVDYSAINKKKIESSSKQPVNSKQKSVTIATKTEVKLKTTSGSSKTITAKTITKARVKKVYTLTGQKYDPPEEREPLRIFYESLSQQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRRQKELRTGTPIKSVK-LPSKPESSQRQQQASKNGTLKAKKRIINESDDDDEFILSPKRRKG 201
BLAST of eg_v1.0.alternate_g629.t1 vs. ExPASy TrEMBL
Match: V4UI78|V4UI78_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10009557mg PE=4 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 2.775e-92 Identity = 156/197 (79.19%), Postives = 157/197 (79.70%), Query Frame = 0 Query: 1 MATESKASVGKVKSSNQASSSKGKPDSSSLNKKKIDSSIKQPPKSSSALTKTEVKSKTTSSSSKTITKTTTKVREKKVFTLPGQKFDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRKQKQVRMGTPNKSPHALSNKPESSQKQQQGSKNGDIKAKRRLSNDADDDDDLILSPKRRKG 197 MATESKASVGKVKSSNQASSSKGKPDSSSLNKKKIDSSIKQPPKSSSALTKTE REPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRKQKQVRMGTPNKSPH LSNKPESSQKQQQGSKNGDIKAKRR+SNDADDDDD ILSPKRRKG Sbjct: 1 MATESKASVGKVKSSNQASSSKGKPDSSSLNKKKIDSSIKQPPKSSSALTKTE--------------------------------------REPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRKQKQVRMGTPNKSPHPLSNKPESSQKQQQGSKNGDIKAKRRVSNDADDDDDFILSPKRRKG 159
BLAST of eg_v1.0.alternate_g629.t1 vs. ExPASy TrEMBL
Match: A0A2I4GNQ3|A0A2I4GNQ3_JUGRE (uncharacterized protein LOC109009495 OS=Juglans regia OX=51240 GN=LOC109009495 PE=4 SV=2) HSP 1 Score: 258.07 bits (658), Expect = 1.508e-84 Identity = 148/201 (73.63%), Postives = 172/201 (85.57%), Query Frame = 0 Query: 1 MATESKASVGKVKSSNQASSSKGKPDSSSLNKKKIDSSIKQP----PKSSSALTKTEVKSKTTSSSSKTITKTTTKVREKKVFTLPGQKFDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRKQKQVRMGTPNKSPHALSNKPESSQKQQQGSKNGDIKAKRRLSNDADDDDDLILSPKRRKG 197 MATE+K+ V KV+ S Q SKGK +SS+ N+KK++ SIKQP KS + + KTEVKSKTTS+S+KT TKTTT+VREKKV+TLPGQK DPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLS ERAKKAYEKKQR+QK++RMGTP KS LS KPESSQKQQQ SKNG++KAK+R+ N++DDDD+ ILSPKRRKG Sbjct: 1 MATETKSCVVKVRPSLQDGPSKGKLNSSAANRKKVEGSIKQPIDSKQKSVTTVVKTEVKSKTTSASAKTTTKTTTRVREKKVYTLPGQKCDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSSERAKKAYEKKQRRQKELRMGTPIKSLKPLS-KPESSQKQQQASKNGNLKAKKRIINESDDDDEFILSPKRRKG 200
BLAST of eg_v1.0.alternate_g629.t1 vs. ExPASy TrEMBL
Match: A0A6P9EZ35|A0A6P9EZ35_JUGRE (uncharacterized protein LOC108985807 isoform X2 OS=Juglans regia OX=51240 GN=LOC108985807 PE=4 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 1.913e-81 Identity = 147/202 (72.77%), Postives = 166/202 (82.18%), Query Frame = 0 Query: 1 MATESKASVGKVKSSNQASSSKGKPDSSSLNKKKIDSSIKQP----PKSSSALTKTEVKSKTTSSSSKTITKTTT-KVREKKVFTLPGQKFDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRKQKQVRMGTPNKSPHALSNKPESSQKQQQGSKNGDIKAKRRLSNDADDDDDLILSPKRRKG 197 MAT +K+SV +VK S+Q SSK K DSSS NKKKI+SS KQP KS + KTEVKSKT S+S+ T TT +VREKKV+TLPGQK+DPPEEREPLRIFYESLS+QIPTSEMAEFWMMEHGLLSPERAKKAYEKKQR+QKQ+RMGTP KS S +PESSQKQQQ SKNG +KAK+R+ ND+ DDDD ILSPKRRKG Sbjct: 1 MATVTKSSVVRVKPSHQDGSSKAKVDSSSANKKKIESSNKQPVDSKQKSVTTAVKTEVKSKTASASASAKTTKTTTRVREKKVYTLPGQKYDPPEEREPLRIFYESLSQQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRRQKQLRMGTPIKSLKPPS-RPESSQKQQQASKNGILKAKKRIINDS-DDDDFILSPKRRKG 200
BLAST of eg_v1.0.alternate_g629.t1 vs. ExPASy TrEMBL
Match: A0A1Q3CX12|A0A1Q3CX12_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_28052 PE=4 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 5.872e-80 Identity = 152/202 (75.25%), Postives = 171/202 (84.65%), Query Frame = 0 Query: 1 MATESKASVGKVKSSNQASSSKGKPDSSSLNKKKIDSSIKQP----PKSSSALTKT-EVKSKTTSSSSKTITKTTTKVREKKVFTLPGQKFDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRKQKQVRMGTPNKSPHALSNKPESSQKQQQGSKNGDIKAKRRLSNDADDDDDLILSPKRRKG 197 MATE+K SV KVK NQ SSKGK +SS + KKKI+SS KQP PKS + KT EVKSKTTSSSSKTITKTTTK REKKV+TLPGQ++DPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPERAKKA+EKKQRKQKQ+RMGTP K S KPESSQ+QQ KNGD+KAK+R+ N++DD+D++ILSPKRRKG Sbjct: 1 MATETKTSVVKVKPGNQDGSSKGKMESSVI-KKKIESSSKQPVGSKPKSMQTVAKTTEVKSKTTSSSSKTITKTTTKTREKKVYTLPGQRYDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPERAKKAHEKKQRKQKQIRMGTPIKISKPYS-KPESSQRQQPPLKNGDVKAKKRIKNESDDEDEIILSPKRRKG 200
BLAST of eg_v1.0.alternate_g629.t1 vs. ExPASy TrEMBL
Match: A0A6P9F2L9|A0A6P9F2L9_JUGRE (uncharacterized protein LOC108985807 isoform X1 OS=Juglans regia OX=51240 GN=LOC108985807 PE=4 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 2.779e-78 Identity = 151/221 (68.33%), Postives = 170/221 (76.92%), Query Frame = 0 Query: 1 MATESKASVGKVKSSNQASSSKGKPDSSSLNKKKIDSSIKQP----PKSSSALTKTEVKSKTTSSSSKTITKTTT--------------------KVREKKVFTLPGQKFDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRKQKQVRMGTPNKSPHALSNKPESSQKQQQGSKNGDIKAKRRLSNDADDDDDLILSPKRRKG 197 MAT +K+SV +VK S+Q SSK K DSSS NKKKI+SS KQP KS + KTEVKSKT S+S+KT TKTTT +VREKKV+TLPGQK+DPPEEREPLRIFYESLS+QIPTSEMAEFWMMEHGLLSPERAKKAYEKKQR+QKQ+RMGTP KS S +PESSQKQQQ SKNG +KAK+R+ ND+ DDDD ILSPKRRKG Sbjct: 1 MATVTKSSVVRVKPSHQDGSSKAKVDSSSANKKKIESSNKQPVDSKQKSVTTAVKTEVKSKTASASAKTTTKTTTKVKSKTASASASAKTTKTTTRVREKKVYTLPGQKYDPPEEREPLRIFYESLSQQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRRQKQLRMGTPIKSLKPPS-RPESSQKQQQASKNGILKAKKRIINDS-DDDDFILSPKRRKG 219
BLAST of eg_v1.0.alternate_g629.t1 vs. ExPASy TrEMBL
Match: W9RI00|W9RI00_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_010701 PE=4 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 1.741e-77 Identity = 145/217 (66.82%), Postives = 165/217 (76.04%), Query Frame = 0 Query: 1 MATESKASVGKVKSSNQASSSKGKPDSSSLNKKKIDSSIKQP-----PKSSSALTKTE------VKSKTTSSSSKTITKTTTK---------VREKKVFTLPGQKFDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRKQKQVRMGTPNKSPHALSNKPESSQKQQQGSKNGDIKAKRRLSNDADDDDDLILSPKRRKG 197 MATE+K +V K+K SN + SSKGK DSS++ KKKI+SS KQ PK S + K+E VKSKTTS SSK T TTT V++KKV+TLPGQK+DPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPE+AKKAYE+KQRKQKQ+RMGTP K P +KPESSQKQ Q SKNGD+K KRR+ ND+ DDD ILSPKRRK Sbjct: 1 MATETKTAVVKLKPSNLSGSSKGKLDSSAI-KKKIESSSKQITDSSRPKFVSTIVKSEIAENVKVKSKTTSGSSKAATTTTTTKTTKTSTTKVKQKKVYTLPGQKYDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPEKAKKAYERKQRKQKQIRMGTPIK-PLKPPSKPESSQKQLQASKNGDVKVKRRIVNDS--DDDFILSPKRRKA 213
BLAST of eg_v1.0.alternate_g629.t1 vs. Araport11
Match: AT5G11600.2 (| hypothetical protein | Chr5:3733815-3735015 REVERSE LENGTH=242 | 201606) HSP 1 Score: 166.392 bits (420), Expect = 1.938e-51 Identity = 95/146 (65.07%), Postives = 116/146 (79.45%), Query Frame = 0 Query: 54 VKSKTTSSSSKTITKTTTKVREKKVFTLPGQKFDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRKQKQVRMGTPNKSPHALSNKPESSQKQQQGSKNGDIKAK---RRLSNDADDDDDLILSPKRRK 196 VK+KTTS++ ++ K K REKKV++L GQKFDPPEEREPLRIFYESLSKQIP SEMAEFW+MEHG+LSPE+AK+A+EKKQRK KQ+RMGTP+KS S+K ESSQ+ SKN + A+ + + +D DDDDD ILS KRRK Sbjct: 99 VKAKTTSATV-SLVKGKAK-REKKVYSLAGQKFDPPEEREPLRIFYESLSKQIPGSEMAEFWLMEHGMLSPEKAKRAFEKKQRKMKQIRMGTPSKSAPTFSSKAESSQR-TSASKNNGLDARKKKKVVDDDDDDDDDFILSHKRRK 241
BLAST of eg_v1.0.alternate_g629.t1 vs. Araport11
Match: AT5G11600.1 (| hypothetical protein | Chr5:3733815-3735015 REVERSE LENGTH=242 | 201606) HSP 1 Score: 166.392 bits (420), Expect = 1.938e-51 Identity = 95/146 (65.07%), Postives = 116/146 (79.45%), Query Frame = 0 Query: 54 VKSKTTSSSSKTITKTTTKVREKKVFTLPGQKFDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRKQKQVRMGTPNKSPHALSNKPESSQKQQQGSKNGDIKAK---RRLSNDADDDDDLILSPKRRK 196 VK+KTTS++ ++ K K REKKV++L GQKFDPPEEREPLRIFYESLSKQIP SEMAEFW+MEHG+LSPE+AK+A+EKKQRK KQ+RMGTP+KS S+K ESSQ+ SKN + A+ + + +D DDDDD ILS KRRK Sbjct: 99 VKAKTTSATV-SLVKGKAK-REKKVYSLAGQKFDPPEEREPLRIFYESLSKQIPGSEMAEFWLMEHGMLSPEKAKRAFEKKQRKMKQIRMGTPSKSAPTFSSKAESSQR-TSASKNNGLDARKKKKVVDDDDDDDDDFILSHKRRK 241
BLAST of eg_v1.0.alternate_g629.t1 vs. Araport11
Match: AT1G19990.1 (| nucleolin | Chr1:6935327-6936665 FORWARD LENGTH=251 | 201606) HSP 1 Score: 90.5077 bits (223), Expect = 4.725e-22 Identity = 43/71 (60.56%), Postives = 54/71 (76.06%), Query Frame = 0 Query: 79 FTLPGQKFDPPEEREPLRIFYESLSKQIPTSEMAEFWMMEHGLLSPERAKKAYEKKQRKQKQVRMGTPNKS 149 + LPGQK + P+ER+PLRIFYESL KQIPTS+MA+ W+ME GLL E+AKK EKK QK ++ +P KS Sbjct: 115 YDLPGQKREQPDERDPLRIFYESLYKQIPTSDMAQIWLMESGLLPAEKAKKVLEKKL--QKGGKLSSPVKS 183 The following BLAST results are available for this feature:
BLAST of eg_v1.0.alternate_g629.t1 vs. ExPASy TrEMBL
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of eg_v1.0.alternate_g629.t1 vs. ExPASy TrEMBL
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of eg_v1.0.alternate_g629.t1 vs. Araport11
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs Araport11) Total hits: 3 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus glauca CRC3463 v1.0 v1.0 proteins
Date Performed: 2024-01-20 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >eg_v1.0.alternate_g629.t1-ucr_v1 ID=eg_v1.0.alternate_g629.t1-ucr_v1; Name=eg_v1.0.alternate_g629.t1; organism=Citrus glauca; type=mRNA; length=615bpback to top protein sequence of eg_v1.0.alternate_g629.t1-ucr_v1 >eg_v1.0.alternate_g629.t1-ucr_v1 ID=eg_v1.0.alternate_g629.t1-ucr_v1; Name=eg_v1.0.alternate_g629.t1-ucr_v1; organism=Citrus glauca; type=polypeptide; length=204bpback to top mRNA from alignment at Alt_Scaffold_1:4825995..4829166- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=3172bp; location=Sequence derived from: Alt_Scaffold_1:4825995..4829166- (Citrus glaucaback to top Coding sequence (CDS) from alignment at Alt_Scaffold_1:4825995..4829166- >eg_v1.0.alternate_g629.t1-ucr_v1 ID=eg_v1.0.alternate_g629.t1-ucr_v1; Name=eg_v1.0.alternate_g629.t1; organism=Citrus glauca; type=CDS; length=615bp; location=Sequence derived from: Alt_Scaffold_1:4825995..4829166- (Citrus glaucaback to top |