eg_v1.0.primary_g1245.t1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of eg_v1.0.primary_g1245.t1 vs. ExPASy TrEMBL
Match: V4UQB1|V4UQB1_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10009026mg PE=4 SV=1) HSP 1 Score: 521.546 bits (1342), Expect = 0.000e+0 Identity = 253/259 (97.68%), Postives = 255/259 (98.46%), Query Frame = 0 Query: 1 MFILSTCAPILPVIDFSRHLNNRLAPFSAVTLSTQSHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE--DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSD 257
MFIL+TCAPILPVIDFSRHLNNRLAPFSAVTLSTQ+HAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIG LGGCNSMNMQLSQSHMDKRPSYD ISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSD
Sbjct: 1 MFILNTCAPILPVIDFSRHLNNRLAPFSAVTLSTQNHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVEVEDEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGRLGGCNSMNMQLSQSHMDKRPSYDVISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSD 259
BLAST of eg_v1.0.primary_g1245.t1 vs. ExPASy TrEMBL
Match: A0A067EZL7|A0A067EZL7_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g022793mg PE=4 SV=1) HSP 1 Score: 520.005 bits (1338), Expect = 0.000e+0 Identity = 252/259 (97.30%), Postives = 254/259 (98.07%), Query Frame = 0 Query: 1 MFILSTCAPILPVIDFSRHLNNRLAPFSAVTLSTQSHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE--DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSD 257
MFIL+TCAPILPVIDFSRHLNNRLAPFSAVTLSTQ+HAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIG LGGCNSMNMQLSQSHMDKRPSYD ISGANVTPTTFYN GDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSD
Sbjct: 1 MFILNTCAPILPVIDFSRHLNNRLAPFSAVTLSTQNHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVEVEDEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGRLGGCNSMNMQLSQSHMDKRPSYDVISGANVTPTTFYNTGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSD 259
BLAST of eg_v1.0.primary_g1245.t1 vs. ExPASy TrEMBL
Match: A0A2H5PDI3|A0A2H5PDI3_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_126580 PE=4 SV=1) HSP 1 Score: 518.464 bits (1334), Expect = 0.000e+0 Identity = 251/259 (96.91%), Postives = 254/259 (98.07%), Query Frame = 0 Query: 1 MFILSTCAPILPVIDFSRHLNNRLAPFSAVTLSTQSHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE--DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSD 257
MFIL+TCAPILPVIDFSRHLNNRLAPFSAVTLSTQ+HAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIG LGGCNSMNMQLSQSHMDKRPSYD ISGANVTPTTFYN GDLEIQDNLARIW+DIGTTEPLLLDVLINALTQISSD
Sbjct: 1 MFILNTCAPILPVIDFSRHLNNRLAPFSAVTLSTQNHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVEVEDEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGRLGGCNSMNMQLSQSHMDKRPSYDVISGANVTPTTFYNTGDLEIQDNLARIWMDIGTTEPLLLDVLINALTQISSD 259
BLAST of eg_v1.0.primary_g1245.t1 vs. ExPASy TrEMBL
Match: A0A067F746|A0A067F746_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g022793mg PE=4 SV=1) HSP 1 Score: 518.464 bits (1334), Expect = 0.000e+0 Identity = 251/259 (96.91%), Postives = 254/259 (98.07%), Query Frame = 0 Query: 1 MFILSTCAPILPVIDFSRHLNNRLAPFSAVTLSTQSHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE--DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSD 257
MFIL+TCAPILPVIDFSRHLNNRLAPFSAVTLSTQ+HAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIG LGGCNSMNMQLSQSHMDKRPSYD ISGANVTPTTFYN GDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISS+
Sbjct: 1 MFILNTCAPILPVIDFSRHLNNRLAPFSAVTLSTQNHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVEVEDEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGRLGGCNSMNMQLSQSHMDKRPSYDVISGANVTPTTFYNTGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSE 259
BLAST of eg_v1.0.primary_g1245.t1 vs. ExPASy TrEMBL
Match: V4WDN7|V4WDN7_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10009026mg PE=4 SV=1) HSP 1 Score: 510.375 bits (1313), Expect = 0.000e+0 Identity = 252/270 (93.33%), Postives = 255/270 (94.44%), Query Frame = 0 Query: 1 MFILSTCAPILPVIDFSRHLNNRLAPFSAVTLSTQSHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE--DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFN-----------KFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSD 257
MFIL+TCAPILPVIDFSRHLNNRLAPFSAVTLSTQ+HAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFN +FDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIG LGGCNSMNMQLSQSHMDKRPSYD ISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSD
Sbjct: 1 MFILNTCAPILPVIDFSRHLNNRLAPFSAVTLSTQNHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVEVEDEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNNCFVNLPTCIARFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGRLGGCNSMNMQLSQSHMDKRPSYDVISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSD 270
BLAST of eg_v1.0.primary_g1245.t1 vs. ExPASy TrEMBL
Match: A0A067EW47|A0A067EW47_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g022793mg PE=4 SV=1) HSP 1 Score: 473.396 bits (1217), Expect = 9.074e-168 Identity = 228/239 (95.40%), Postives = 231/239 (96.65%), Query Frame = 0 Query: 1 MFILSTCAPILPVIDFSRHLNNRLAPFSAVTLSTQSHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE--DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIG 237
MFIL+TCAPILPVIDFSRHLNNRLAPFSAVTLSTQ+HAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIG LGGCNSMNMQLSQSHMDKRPSYD ISGANVTPTTFYN GDLEIQDNLARIW +
Sbjct: 1 MFILNTCAPILPVIDFSRHLNNRLAPFSAVTLSTQNHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVEVEDEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGRLGGCNSMNMQLSQSHMDKRPSYDVISGANVTPTTFYNTGDLEIQDNLARIWYGLA 239
BLAST of eg_v1.0.primary_g1245.t1 vs. ExPASy TrEMBL
Match: A0A067F7Z5|A0A067F7Z5_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g022793mg PE=4 SV=1) HSP 1 Score: 469.929 bits (1208), Expect = 3.049e-166 Identity = 227/234 (97.01%), Postives = 229/234 (97.86%), Query Frame = 0 Query: 1 MFILSTCAPILPVIDFSRHLNNRLAPFSAVTLSTQSHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE--DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARI 232
MFIL+TCAPILPVIDFSRHLNNRLAPFSAVTLSTQ+HAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIG LGGCNSMNMQLSQSHMDKRPSYD ISGANVTPTTFYN GDLEIQDNLARI
Sbjct: 1 MFILNTCAPILPVIDFSRHLNNRLAPFSAVTLSTQNHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVEVEDEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGRLGGCNSMNMQLSQSHMDKRPSYDVISGANVTPTTFYNTGDLEIQDNLARI 234
BLAST of eg_v1.0.primary_g1245.t1 vs. ExPASy TrEMBL
Match: V4UK77|V4UK77_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10009026mg PE=4 SV=1) HSP 1 Score: 461.07 bits (1185), Expect = 1.179e-162 Identity = 227/245 (92.65%), Postives = 230/245 (93.88%), Query Frame = 0 Query: 1 MFILSTCAPILPVIDFSRHLNNRLAPFSAVTLSTQSHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE--DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFN-----------KFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARI 232
MFIL+TCAPILPVIDFSRHLNNRLAPFSAVTLSTQ+HAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFN +FDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIG LGGCNSMNMQLSQSHMDKRPSYD ISGANVTPTTFYNIGDLEIQDNLARI
Sbjct: 1 MFILNTCAPILPVIDFSRHLNNRLAPFSAVTLSTQNHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVEVEDEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNNCFVNLPTCIARFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGRLGGCNSMNMQLSQSHMDKRPSYDVISGANVTPTTFYNIGDLEIQDNLARI 245
BLAST of eg_v1.0.primary_g1245.t1 vs. ExPASy TrEMBL
Match: A0A2H5PDL8|A0A2H5PDL8_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_126580 PE=4 SV=1) HSP 1 Score: 369.392 bits (947), Expect = 4.706e-127 Identity = 194/259 (74.90%), Postives = 198/259 (76.45%), Query Frame = 0 Query: 1 MFILSTCAPILPVIDFSRHLNNRLAPFSAVTLSTQSHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE--DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSD 257
MFIL+TCAPILPVIDFSRHLNNRLAPFSAVTLSTQ+HAPRLIRTPVFVSQAQKLQGEVGIDVDVEVE DEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQ R K+K AIRAWHIIG LGGCNSMNMQLSQSHMDKRPSYD ISGANVTPTTFYN GDLEIQDNLARIW+DIGTTEPLLLDVLINALTQISSD
Sbjct: 1 MFILNTCAPILPVIDFSRHLNNRLAPFSAVTLSTQNHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVEVEDEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQ--------RAKSK-----------------------------------------------AIRAWHIIGRLGGCNSMNMQLSQSHMDKRPSYDVISGANVTPTTFYNTGDLEIQDNLARIWMDIGTTEPLLLDVLINALTQISSD 204
BLAST of eg_v1.0.primary_g1245.t1 vs. ExPASy TrEMBL
Match: A0A5C7HYT0|A0A5C7HYT0_9ROSI (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_012879 PE=4 SV=1) HSP 1 Score: 370.548 bits (950), Expect = 7.051e-127 Identity = 187/258 (72.48%), Postives = 210/258 (81.40%), Query Frame = 0 Query: 1 MFILSTCAPILPVIDFSRHL-NNRLAPFSAVTLSTQSHAPRLIRTPVFVSQAQKLQGEVGIDVDVEVEDEDVDVEDKTTSRKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSD 257
M IL TC+P LP SRHL NR +PFS VTLS ++HA R T +FVS+A+K + EV ID ++ED + T SRK GR + KDYDKDPEFA+ILGS LDDPQ+A+SKM DRLK KR+KILHTKTGS P+KVTFNKFDFSNSYIWFE YNAPLE+DVSLICDA+RAWHIIG LGGCNSMNMQLSQS MDKRP+YDAI GANVTPTTF NIGDLEIQ+NLAR+WVDIGTTEPLLLDVLINALTQ+SSD
Sbjct: 1 MLILHTCSPTLPFTQISRHLITNRFSPFSTVTLSVRNHA-RPSGTSLFVSKAKKSETEVDID-----DEEDTE----TRSRKKVGGRAQQ--KDYDKDPEFAEILGSVLDDPQKAQSKMEDRLKKKRNKILHTKTGSGAPMKVTFNKFDFSNSYIWFELYNAPLEKDVSLICDAMRAWHIIGRLGGCNSMNMQLSQSPMDKRPNYDAIGGANVTPTTFLNIGDLEIQENLARVWVDIGTTEPLLLDVLINALTQLSSD 246
BLAST of eg_v1.0.primary_g1245.t1 vs. Araport11
Match: AT4G29400.1 (| oxidoreductase/transition metal ion-binding protein (DUF3531) | Chr4:14466350-14467980 FORWARD LENGTH=302 | 201606) HSP 1 Score: 282.722 bits (722), Expect = 1.747e-95 Identity = 129/178 (72.47%), Postives = 155/178 (87.08%), Query Frame = 0 Query: 80 RKAYRGRRSEEGKDYDKDPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSD 257
R YR ++ E DYDKDPEFADILG CLD+P +A+ KM +RL+ KR+KILHTKTGSAT + VTFNKF++SNSY+W EFYN PL++D++LI D IR+WHI+G LGG NSMNMQLSQ+ +DKRP+YDAI GANV PTTFYNIGDLE+QDN+ARIW+DIGT+EPL+LDVLINALTQISSD
Sbjct: 94 RGVYRAKK--EKIDYDKDPEFADILGDCLDNPDKAQKKMEERLRKKRNKILHTKTGSATSMPVTFNKFEYSNSYMWLEFYNTPLDKDIALISDTIRSWHILGRLGGYNSMNMQLSQAPLDKRPNYDAILGANVEPTTFYNIGDLEVQDNVARIWLDIGTSEPLILDVLINALTQISSD 269
BLAST of eg_v1.0.primary_g1245.t1 vs. Araport11
Match: AT5G08400.2 (| structural maintenance of chromosomes-like protein%2C putative (DUF3531) | Chr5:2707225-2708911 REVERSE LENGTH=300 | 201606) HSP 1 Score: 149.828 bits (377), Expect = 1.485e-43 Identity = 92/281 (32.74%), Postives = 142/281 (50.53%), Query Frame = 0 Query: 1 MFILSTCAPILPVIDFSRHLNNRLAPFSAVTLSTQSHAPRLIRTPVFVS-QAQKLQGEVGIDVDVEVEDEDVDVEDKTTSRKAYRGRR------SEEGKDYDK-----------------DPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSD 257
+ LS+C + +LN +PF S R + T V VS + L GE ++ + +K + A RGRR + +DYD+ D E +LG + +P+ + K+ +R++ K KTGS KV F F+ +S+IWFE Y P +RDV LI I+AW+++G LG N+ N+QL+ + ++ P YDA G V P++F++I D+E QDN R+WVD+GT++ LDVL+N LT +SS+
Sbjct: 6 LLTLSSC---------TMNLNFAFSPFLVSQRQPFSSHKRNLHTLVAVSANSDNLAGE---------DNGGISAANKGSGTTA-RGRRLLKVREEKRKRDYDRLHDYPSWAKVLESACKDDEELRAVLGDSIGNPELMRKKVEERVRKKGKDFQKQKTGSVLSFKVNFRDFNPVDSFIWFELYGTPSDRDVDLIGSVIQAWYVMGRLGAFNTSNLQLANTSLEYDPLYDAEKGFKVMPSSFHDISDVEFQDNWGRVWVDLGTSDIFALDVLLNCLTVMSSE 267
BLAST of eg_v1.0.primary_g1245.t1 vs. Araport11
Match: AT5G08400.1 (| structural maintenance of chromosomes-like protein%2C putative (DUF3531) | Chr5:2707225-2708911 REVERSE LENGTH=333 | 201606) HSP 1 Score: 147.132 bits (370), Expect = 3.174e-42 Identity = 67/161 (41.61%), Postives = 102/161 (63.35%), Query Frame = 0 Query: 97 DPEFADILGSCLDDPQRAKSKMADRLKNKRDKILHTKTGSATPVKVTFNKFDFSNSYIWFEFYNAPLERDVSLICDAIRAWHIIGCLGGCNSMNMQLSQSHMDKRPSYDAISGANVTPTTFYNIGDLEIQDNLARIWVDIGTTEPLLLDVLINALTQISSD 257
D E +LG + +P+ + K+ +R++ K KTGS KV F F+ +S+IWFE Y P +RDV LI I+AW+++G LG N+ N+QL+ + ++ P YDA G V P++F++I D+E QDN R+WVD+GT++ LDVL+N LT +SS+
Sbjct: 140 DEELRAVLGDSIGNPELMRKKVEERVRKKGKDFQKQKTGSVLSFKVNFRDFNPVDSFIWFELYGTPSDRDVDLIGSVIQAWYVMGRLGAFNTSNLQLANTSLEYDPLYDAEKGFKVMPSSFHDISDVEFQDNWGRVWVDLGTSDIFALDVLLNCLTVMSSE 300 The following BLAST results are available for this feature:
BLAST of eg_v1.0.primary_g1245.t1 vs. ExPASy TrEMBL
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of eg_v1.0.primary_g1245.t1 vs. ExPASy TrEMBL
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of eg_v1.0.primary_g1245.t1 vs. Araport11
Analysis Date: 2024-01-20 (Blastp of Citrus glauca CRC3463 v1.0 proteins vs Araport11) Total hits: 3 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus glauca CRC3463 v1.0 v1.0 proteins
Date Performed: 2024-01-20 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >eg_v1.0.primary_g1245.t1-ucr_v1 ID=eg_v1.0.primary_g1245.t1-ucr_v1; Name=eg_v1.0.primary_g1245.t1; organism=Citrus glauca; type=mRNA; length=873bpback to top protein sequence of eg_v1.0.primary_g1245.t1-ucr_v1 >eg_v1.0.primary_g1245.t1-ucr_v1 ID=eg_v1.0.primary_g1245.t1-ucr_v1; Name=eg_v1.0.primary_g1245.t1-ucr_v1; organism=Citrus glauca; type=polypeptide; length=257bpback to top mRNA from alignment at Pri_Scaffold_1:12041446..12044803+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=3358bp; location=Sequence derived from: Pri_Scaffold_1:12041446..12044803+ (Citrus glaucaback to top Coding sequence (CDS) from alignment at Pri_Scaffold_1:12041446..12044803+ >eg_v1.0.primary_g1245.t1-ucr_v1 ID=eg_v1.0.primary_g1245.t1-ucr_v1; Name=eg_v1.0.primary_g1245.t1; organism=Citrus glauca; type=CDS; length=773bp; location=Sequence derived from: Pri_Scaffold_1:12041446..12044803+ (Citrus glaucaback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|