gene-KPL71_018546-mRNA1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of gene-KPL71_018546-mRNA1 vs. DB:SwissProt
Match: PP166_ARATH (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1) HSP 1 Score: 339.347 bits (869), Expect = 1.656e-105 Identity = 174/421 (41.33%), Postives = 265/421 (62.95%), Query Frame = 3 Query: 879 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAANYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAYAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKHYKQNLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISAD 2141 L R ++ GDP+ S++ +LD W+++G + +L IIK R + RFSHALQIS WM++ ++ DVAIRLDLIAKV G+ +A +F +P + + +Y ALLN YA K KAE + Q+M++ G +K + YN M+N+Y +TG Y ++ L+ EME++ + D +T + L AY+ SD EG++K + EAD+G+ LDW YA A+GY+KAGL++KAL +LRKSE ++ K AY+ +++ Y A G K++V R+W YK+ YN GYI VIS+LLK D +E EKI EEWE+ + DIRIP+ LI YC++G++ KAE ++ + + TW +A GY + EK VE K+A+ + + G W+P + L +C+ Y + +RD+EG ++LL+ + IS D Sbjct: 40 LQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDWMSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKMEKAVEKWKRAIEVSKPG--WRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHISYD 458
BLAST of gene-KPL71_018546-mRNA1 vs. DB:SwissProt
Match: PP334_ARATH (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 2.285e-74 Identity = 136/413 (32.93%), Postives = 223/413 (54.00%), Query Frame = 3 Query: 879 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAANYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAYAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKHYKQNLK-VYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLL 2114 LY +SP+GDP S+ P L WV+ G+ + + +L I+ R KRF HAL++S WM + V +P + A+ LDLI +V G A YF + E+ K Y ALLN Y ++ EK+ + ++M++ G V ++ YN++M +Y G ++K+ ++ EM+E+ + D Y++ I ++A+ A D E I + ME + + +DW YA AA Y+ G D+A+ +L+ SE + K Y+ +IT YA G K +VLR+W K K N+ Y+ V+ SL+K D + AE++ EW+S C+D R+PN +I Y + + KAE ++ RG +W L+AT Y + E + MK AL + +W+P + + L + E ++ + F+ L Sbjct: 27 LYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKWMNETGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSEN-RLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASL 438
BLAST of gene-KPL71_018546-mRNA1 vs. DB:SwissProt
Match: PPR3_ARATH (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2) HSP 1 Score: 246.128 bits (627), Expect = 2.243e-70 Identity = 143/427 (33.49%), Postives = 235/427 (55.04%), Query Frame = 3 Query: 879 LYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSN-FVLTPADVAIRLDLIAKVQGIEQAANYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAYAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEV-LMMHNKFSRAYDFVITQYAACGNKDDVLRVWKHYKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLHD 2150 +Y+ +S M P +L+QW + GR L +L ++K+ R YKR + AL++ WM + F L+ +D AI+LDLI KV+GI A +F +PE K VY +LLNAY AKS EKAE ++ MRD+G + +N MM +Y Y K+D+++ EM++K I D Y+++I LS+ + E ++ + M++D + +WT ++T A+ Y+K G ++KA LRK E + N+ Y ++++ Y + GNK ++ RVW YK + + N GY ++SSL++ +E AEK++EEW +D RIPN L++AY + L AE L G +P+ TW ++A G+ + + + ++ A E + W+P L+ ++E D+ + ++LL S DL D Sbjct: 69 IYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNRI--PYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEALTCLRNAFS-AEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQ----SGDLED 488
BLAST of gene-KPL71_018546-mRNA1 vs. DB:SwissProt
Match: PPR86_ARATH (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 1.855e-65 Identity = 132/390 (33.85%), Postives = 223/390 (57.18%), Query Frame = 3 Query: 990 IKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAANYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAYAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKHYKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEA-GTRWKPSKECLAACLGYYKKERDIEGADYFIKLL-TGKEIISADLHD 2150 IKK R + AL++S M ++ T +D AI LDL+AK + I NYF +PE K Y +LLN Y EKAE ++ +M++ + ++ YNS+M +Y +TG +K+ +++ E++ + + D YT+++ + A AA +D G+++++ M D V DWT Y+ AS YV AGLS KA L++ E+ F+ AY F+IT Y G +V R+W+ + + K N Y+ +I L+K + + AE +F+EW++ +DIRI N LI AY + GL+ KA L KA RG + N +TW + Y+++ + +E M KA+ + + G +W PS E + A + Y+++++D+ GA+ +++L G + I A++ + Sbjct: 62 IKKLRNRGLYYPALKLSEVMEERG-MNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFT-AYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILKNGTDNIGAEIFE 449
BLAST of gene-KPL71_018546-mRNA1 vs. DB:SwissProt
Match: PP400_ARATH (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 3.013e-64 Identity = 132/410 (32.20%), Postives = 226/410 (55.12%), Query Frame = 3 Query: 909 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAANYFNCVPEKLKLPSV--------YIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAYAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSR-AYDFVITQYAACGNKDDVLRVWKHYKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIK 2108 P S+ LL + ++ G + + +LR+I K+ R+ ALQ+ WM + + + D+A+RLDLI K G++Q YF EKL SV Y+ LL AY K ++AE +M+++ G + +N MM +Y +G Y+K+ ++ M+ I + ++++ ++A S ++ + M D+ V + W+ T A+ Y+K+G +KA VL +E ++ N+ +R Y F+IT YA+ GNK+ V+R+W+ K ++ YICV+SSL+K +E AE++F EWE++ +D+R+ N L+ AY R G + KAE+L RG PN +TW ++ G+++ EK ++AM + VL+ W+PS + A Y++KE IE A +++ Sbjct: 50 PRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYF----EKLLHSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKML--NRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWVKCENMEKAIDAMHQVFVLMRR-CHWRPSHNIVMAIAEYFEKEEKIEEATAYVR 452
BLAST of gene-KPL71_018546-mRNA1 vs. DB:SwissProt
Match: PPR61_ARATH (Putative pentatricopeptide repeat-containing protein At1g28020 OS=Arabidopsis thaliana OX=3702 GN=At1g28020 PE=3 SV=2) HSP 1 Score: 226.098 bits (575), Expect = 8.235e-63 Identity = 125/325 (38.46%), Postives = 191/325 (58.77%), Query Frame = 3 Query: 912 NDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAANYFNCVPEKLKLPSVYIALLNAYACA-KSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAYAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKHYKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLI 1880 N ++P+L+QW ++G ++ +R+IIKK R + ALQ+S WM+K+ L P D A RL LI V G+E+A +F +P+ + SVY +LLN+YA + K+ KAE Q+MRD GL+ + + YN+MM++Y N +K++ L+ EM++ ++ D T + +L Y+A D ++K + E G+ L+W A Y++A S KA+ +LR +E L+ AYD ++ Y GN+++VLRVWK YK + + N GY VI SLLK D + AE+I++ WES L D RIP L Y RG+ KAE L+ Sbjct: 49 NAQIIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAARLHLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFDHRIPTMLASGYRDRGMTEKAEKLM 373 HSP 2 Score: 104.76 bits (260), Expect = 6.387e-22 Identity = 72/214 (33.64%), Postives = 106/214 (49.53%), Query Frame = 3 Query: 912 NDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAANYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAYAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKA 1553 N + PLL+QW ++ +P D L+ +IK R K+FS ALQ+S WM +K L D A RL L V G+E+A YF +PE +K SVY+ALL++YA + D+ L GN +D ++ EMEE +D D T + +L YAA S + ++ + + G+ L+ A YVKAGL+ K+ Sbjct: 384 NKPVTPLLEQWGDQMKPSD---LKCLIKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYAARLYLTENVLGLEEAEKYFENIPENMKDYSVYVALLSSYAKS--------------DKNL-----------------GNM--VDEILREMEENNVDPDLITVNHVLKVYAAESKIQAMEMFMRRWGTEDGIKLERGTMIAMAKAYVKAGLTKKS 561
BLAST of gene-KPL71_018546-mRNA1 vs. DB:SwissProt
Match: PP300_ARATH (Pentatricopeptide repeat-containing protein At4g01990, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g01990 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.499e-52 Identity = 125/425 (29.41%), Postives = 222/425 (52.24%), Query Frame = 3 Query: 879 LYRMLSPMGD-PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAANYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAYAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKHYKQNL-KVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLH 2147 +Y+ LS +G M L+Q+V EG P+ L K R +++ AL+I WM +K T +D AIRL+LIAK +G+E A YFN + + +K S Y +LLN Y K KA+ + M D V ++ +N++M +Y G +K+ +L+ M+EK I T+S+ + + + D +G++K++ M+A+ + W +A A+ Y+K GL KA L+ E M+ Y F+I Y N +V RVW K+ V N Y+ ++ +L K D ++ +K+F EWES +D+R+ N I +Y ++ + +AE + A + + L+ L+N+Q++ ++ + A +L+ W S E +++ ++++ +D++GA+ F K LT +S++ + Sbjct: 41 IYKKLSSLGTRGGGKMEETLNQFVMEGVPVKKHDLIRYAKDLRKFRQPQRALEIFEWMERKE-IAFTGSDHAIRLNLIAKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSNSLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLEN-NMNPDVRDCYHFLINLYTGIANASEVYRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQLLMMHLLKNDQADLALKHFEAA--VLDQDKNWTWSSELISSFFLHFEEAKDVDGAEEFCKTLTKWSPLSSETY 461
BLAST of gene-KPL71_018546-mRNA1 vs. DB:SwissProt
Match: PP302_ARATH (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 5.807e-50 Identity = 114/412 (27.67%), Postives = 221/412 (53.64%), Query Frame = 3 Query: 918 SMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAANYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAYAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKHYKQNLKVYNRG-YICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALVLLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLTGKEIISADLHD 2150 S V + +W EEG + +L I+++ R KR+ HAL+I WM + + L D A+ LDLI+K++G+ A +F +P++++ + +LL++Y K ++KAE + ++M + G +K + YN M+++Y G ++K+ L+ E++ + D T+++ L+A+A+ +D EG +K+ + ++ + DW Y+ + Y K +KA L++ E L + K AY +I+ +A G+KD V WK K + K N Y+ +IS+++K E A+ +++EWES + D RIPN ++ Y R + E + +G P+ TW ++ YL+ EK ++ KA +++ +W + + +++ +++GA+ + LL ++ L++ Sbjct: 76 SAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIR-TSPDIVTYNLWLTAFASGNDVEGAEKVYLKAKEEK-LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKL-VSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKA---IDSVKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYN 481
BLAST of gene-KPL71_018546-mRNA1 vs. DB:SwissProt
Match: PPR4_ARATH (Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g02370 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 1.009e-49 Identity = 120/422 (28.44%), Postives = 222/422 (52.61%), Query Frame = 3 Query: 861 GSSMYKLYRMLSPMGDPNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAANYFNCV-PEKLKLPSVYIALLNAYACAKSAEKAEIIMQQMRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAYAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKHYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEWESRNLCHDIRIPNHLIDAYCRRGLLHKAETLIYKAQLRGTEPNVRTWYLMATGYLQNNQSEKGVEAMKKALV-LLEAGTRWKPSKECLAACLGYYKKERDIEGADYFIKLLT 2117 S +LY+ LS + ++ L+Q++ EG + + L K R ++R HA +I WM K+ + +D AI LDLI K +G+E A NYFN + P S Y AL+N Y EKA+ + M + V ++ +N+MM++Y + +K+ L+ M+++GI T+SI + + + +D +G++KI+ M D W ++ A+ Y KAGL +KA + L+ E M N ++ F+++ YA +V RVW+ K+ +V N Y+ ++ ++ K ++ +KIF EWES+ +D+R+ N I+ Y + + +AE ++ A + P + L+ L+N++++ ++ ++ A+ E W S E ++ +++K +D++GA+ F K+L+ Sbjct: 67 ASRQRELYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWMEKR-KMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNPNN-RDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFSKARQLLMIHLLENDKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGAEDFCKILS 486
BLAST of gene-KPL71_018546-mRNA1 vs. DB:SwissProt
Match: PP372_ARATH (Pentatricopeptide repeat-containing protein At5g09450, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g09450 PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 5.480e-40 Identity = 95/319 (29.78%), Postives = 164/319 (51.41%), Query Frame = 3 Query: 909 PNDSMVPLLDQWVEEGRPLDMEQLRIIIKKFRLYKRFSHALQISMWMTKKSNFVLTPADVAIRLDLIAKVQGIEQAANYFNCVPEKLKLPSVYIALLNAYACAKSAEKAEIIMQQ-MRDRGLVKKTIDYNSMMNVYYQTGNYKKLDSLMHEMEEKGIDCDKYTFSILLSAYAAASDGEGIDKIVAMMEADRGVVLDWTVYATAASGYVKAGLSDKALAVLRKSEVLMMHNKFSRAYDFVITQYAACGNKDDVLRVWKHYKQ-NLKVYNRGYICVISSLLKFDGMESAEKIFEEW-ESRNLCHDIRIPNHLIDAYCRRGL 1856 P S +L++W+ EG + + +LR I K+ R +R+ HAL+++ WM + ++ AD A R+DLI+KV GI+ A YF + K Y +LL+AYA +K E+AE + ++ + L I YN MM +Y G +K+ ++ +++K + D +T+++ LS+ AA + + + KI+ M D W Y S Y+ + A + L + + YDF++ + GNK + ++WK + N + +R YICV+SS L + AE+I +W ES+ D +++A+ GL Sbjct: 67 PKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQHEESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAEALFKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQREWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEIIHQWKESKTTEFDASACLRILNAFRDVGL 385 The following BLAST results are available for this feature:
BLAST of gene-KPL71_018546-mRNA1 vs. DB:SwissProt
Analysis Date: 2023-04-17 (BLAST: C. sinensis DVS_B v1.0) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro: C. sinensis DVS_B v1.0
Date Performed: 2023-04-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >gene-KPL71_018546-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018546-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018546-mRNA1; organism=Citrus sinensis; type=mRNA; length=2763bpback to top protein sequence of gene-KPL71_018546-mRNA1_Citrus_sinensis_DVS_B_v1 >gene-KPL71_018546-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018546-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018546-mRNA1_Citrus_sinensis_DVS_B_v1; organism=Citrus sinensis; type=polypeptide; length=605bpback to top mRNA from alignment at CM039175.1_Chr6_DVS_B:19182217..19185735+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=3519bp; location=Sequence derived from: CM039175.1_Chr6_DVS_B:19182217..19185735+ (Citrus sinensisback to top Coding sequence (CDS) from alignment at CM039175.1_Chr6_DVS_B:19182217..19185735+ >gene-KPL71_018546-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018546-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018546-mRNA1; organism=Citrus sinensis; type=CDS; length=1818bp; location=Sequence derived from: CM039175.1_Chr6_DVS_B:19182217..19185735+ (Citrus sinensisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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