gene-KPL71_018625-mRNA3
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of gene-KPL71_018625-mRNA3 vs. DB:SwissProt
Match: LOG7_ARATH (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 OS=Arabidopsis thaliana OX=3702 GN=LOG7 PE=1 SV=2) HSP 1 Score: 314.309 bits (804), Expect = 4.334e-109 Identity = 164/184 (89.13%), Postives = 177/184 (96.20%), Query Frame = 1 Query: 1 MEDTKSRFKRICVFCGSSSGKKPTYQEAAVELGKELVERKIDXXXXXXXXXXXXXXSQAVHDGGRHVLGVIPKTLTPREITGDPVGEVKTVSDMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGFYNSLLSFVDKAVDEGFISPTARRIIISAPTAKKLVRQLE 552
ME+TKSRFKRICVFCGSSSGKKP+YQEAA++LG ELVER+IDLVYGGGSVGLMGLVSQAVH GGRHVLGVIPKTL PREITG+ +GEVK V+DMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDG+YNSLL+F+DKAVDEGFISP ARRII+SAP AK+LVRQLE
Sbjct: 1 MEETKSRFKRICVFCGSSSGKKPSYQEAAIQLGNELVERRIDLVYGGGSVGLMGLVSQAVHHGGRHVLGVIPKTLMPREITGETIGEVKAVADMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNSLLTFIDKAVDEGFISPMARRIIVSAPNAKELVRQLE 184
BLAST of gene-KPL71_018625-mRNA3 vs. DB:SwissProt
Match: LOG3_ARATH (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 1.133e-98 Identity = 148/180 (82.22%), Postives = 169/180 (93.89%), Query Frame = 1 Query: 13 KSRFKRICVFCGSSSGKKPTYQEAAVELGKELVERKIDXXXXXXXXXXXXXXSQAVHDGGRHVLGVIPKTLTPREITGDPVGEVKTVSDMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGFYNSLLSFVDKAVDEGFISPTARRIIISAPTAKKLVRQLE 552
KS+F+RICVFCGSS GKK +YQ+AAV+LG ELV R IDLVYGGGS+GLMGLVSQAVHDGGRHV+G+IPKTL PRE+TG+ VGEV+ V+DMHQRKAEMA+ +DAFIALPGGYGTLEELLEVITWAQLGIH KPVGLLNVDG+YNSLLSF+DKAV+EGFISPTAR II+SAPTAK+LV++LE
Sbjct: 10 KSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGIIPKTLMPRELTGETVGEVRAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSAPTAKELVKKLE 189
BLAST of gene-KPL71_018625-mRNA3 vs. DB:SwissProt
Match: LOG4_ARATH (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG4 OS=Arabidopsis thaliana OX=3702 GN=LOG4 PE=1 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 1.391e-97 Identity = 150/183 (81.97%), Postives = 168/183 (91.80%), Query Frame = 1 Query: 13 KSRFKRICVFCGSSSGKKPTYQEAAVELGKELVERKIDXXXXXXXXXXXXXXSQAVHDGGRHVLGVIPKTLTPREITGDPVGEVKTVSDMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGFYNSLLSFVDKAVDEGFISPTARRIIISAPTAKKLVRQLEHKS 561
KS+F RICVFCGSS GKK +YQ+AAV+LG ELV R IDLVYGGGS+GLMGLVSQAVHDGGRHV+GVIPKTL PRE+TG+ VGEV+ V+DMHQRKAEMAR +DAFIALPGGYGTLEELLEVITWAQLGIH KPVGLLNVDG+YNSLLSF+DKAV+EGFIS AR+IIISAPTAK+LV++LE S
Sbjct: 10 KSKFGRICVFCGSSQGKKSSYQDAAVDLGNELVLRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVRAVADMHQRKAEMARHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISTNARQIIISAPTAKELVKKLEEYS 192
BLAST of gene-KPL71_018625-mRNA3 vs. DB:SwissProt
Match: LOG2_ARATH (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG2 OS=Arabidopsis thaliana OX=3702 GN=LOG2 PE=1 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 5.455e-97 Identity = 147/184 (79.89%), Postives = 167/184 (90.76%), Query Frame = 1 Query: 1 MEDTKSRFKRICVFCGSSSGKKPTYQEAAVELGKELVERKIDXXXXXXXXXXXXXXSQAVHDGGRHVLGVIPKTLTPREITGDPVGEVKTVSDMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGFYNSLLSFVDKAVDEGFISPTARRIIISAPTAKKLVRQLE 552
ME+TKSRF+RICVFCGSSSG K TY +AA++L +LVER IDLVYGGGSVGLMGL+SQAVHDGGRHVLG+IPK+L PREITG+ +GEV TVS MHQRKAEM RQADAFIALPGGYGT EELLEVITW+QLGIH KPVGLLNVDGFY+SLL+F+DKAVDEGF+S TARRII+SAP A +L++ LE
Sbjct: 1 MEETKSRFRRICVFCGSSSGNKTTYHDAALQLAHQLVERNIDLVYGGGSVGLMGLISQAVHDGGRHVLGIIPKSLAPREITGESIGEVITVSTMHQRKAEMGRQADAFIALPGGYGTFEELLEVITWSQLGIHTKPVGLLNVDGFYDSLLTFIDKAVDEGFVSSTARRIIVSAPNAPQLLQLLE 184
BLAST of gene-KPL71_018625-mRNA3 vs. DB:SwissProt
Match: LOGL2_ORYSJ (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL2 PE=3 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 5.554e-96 Identity = 149/195 (76.41%), Postives = 170/195 (87.18%), Query Frame = 1 Query: 10 TKSRFKRICVFCGSSSGKKPTYQEAAVELGKELVERKIDXXXXXXXXXXXXXXSQAVHDGGRHVLGVIPKTLTPREITGDPVGEVKTVSDMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGFYNSLLSFVDKAVDEGFISPTARRIIISAPTAKKLVRQLEHKSRYTYKIINNKK 594
+SRF+R+CVFCGSS GKK YQ+AA+ELGKELV R IDLVYGGGSVGLMGLVSQAVH+GGRHV+GVIPKTL PREI+G+ VGEVK VSDMHQRKAEMARQ+DAFIALPGGYGTLEELLEVI WAQLGIH KPVGLLNVDG+YN LLSF+DKAV+EGFI P+AR II+ APT K+L+ +LE S K+++ K
Sbjct: 16 VQSRFRRVCVFCGSSHGKKKIYQDAAIELGKELVARNIDLVYGGGSVGLMGLVSQAVHNGGRHVIGVIPKTLMPREISGETVGEVKAVSDMHQRKAEMARQSDAFIALPGGYGTLEELLEVIAWAQLGIHDKPVGLLNVDGYYNPLLSFIDKAVEEGFIRPSARHIIVLAPTPKELIEKLEEYSPQHEKVVSKMK 210
BLAST of gene-KPL71_018625-mRNA3 vs. DB:SwissProt
Match: LOG1_ARATH (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana OX=3702 GN=LOG1 PE=1 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 2.437e-95 Identity = 144/182 (79.12%), Postives = 169/182 (92.86%), Query Frame = 1 Query: 7 DTKSRFKRICVFCGSSSGKKPTYQEAAVELGKELVERKIDXXXXXXXXXXXXXXSQAVHDGGRHVLGVIPKTLTPREITGDPVGEVKTVSDMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGFYNSLLSFVDKAVDEGFISPTARRIIISAPTAKKLVRQLE 552
+ +S+FKRICVFCGSS+G K +Y++AA+ELG ELV R IDLVYGGGS+GLMGL+SQAV +GGRHV+GVIPKTL PREITG+ VGEVK V+DMHQRKAEMA+ +DAFIALPGGYGTLEELLEVITWAQLGIH KPVGLLNV+G+YNSLLSF+DKAV+EGFISPTAR II+SAP+AK+LV++LE
Sbjct: 2 EIESKFKRICVFCGSSAGNKVSYKDAAIELGTELVSRNIDLVYGGGSIGLMGLISQAVFNGGRHVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVEGYYNSLLSFIDKAVEEGFISPTARHIIVSAPSAKELVKKLE 183
BLAST of gene-KPL71_018625-mRNA3 vs. DB:SwissProt
Match: LOGL6_ORYSJ (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL6 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL6 PE=2 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 3.911e-95 Identity = 151/194 (77.84%), Postives = 171/194 (88.14%), Query Frame = 1 Query: 1 MEDTKSRFKRICVFCGSSSGKKPTYQEAAVELGKELVERKIDXXXXXXXXXXXXXXSQAVHDGGRHVLGVIPKTLTPREITGDPVGEVKTVSDMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGFYNSLLSFVDKAVDEGFISPTARRIIISAPTAKKLVRQLEHKSRYTYKII 582
M +SRF+RICVFCGSS GKK +YQ+AAVELGKELV R IDLVYGGGSVGLMGLVSQAV++GGRHV+GVIPKTL PREITG+ VGEVK V+DMHQRKAEMARQ+DAFIALPGGYGTLEELLEVI WAQLGIH KPVGLLNVDG+YNSLLSF+DKAV+E FISP+AR II+ APT K+L+ +LE S K++
Sbjct: 20 MALLQSRFRRICVFCGSSQGKKKSYQDAAVELGKELVARNIDLVYGGGSVGLMGLVSQAVYNGGRHVIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMARQSDAFIALPGGYGTLEELLEVIAWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEEFISPSARHIIVLAPTPKELLEKLEAYSPRHDKVV 213
BLAST of gene-KPL71_018625-mRNA3 vs. DB:SwissProt
Match: LOGL8_ORYSJ (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL8 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL8 PE=2 SV=3) HSP 1 Score: 275.789 bits (704), Expect = 4.440e-93 Identity = 144/177 (81.36%), Postives = 164/177 (92.66%), Query Frame = 1 Query: 22 FKRICVFCGSSSGKKPTYQEAAVELGKELVERKIDXXXXXXXXXXXXXXSQAVHDGGRHVLGVIPKTLTPREITGDPVGEVKTVSDMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGFYNSLLSFVDKAVDEGFISPTARRIIISAPTAKKLVRQLE 552
F+RICV+CGS+ GKKP+YQ+AAV+LGKELVER IDLVYGGGS+GLMGLVS AVH GGRHV+G+IPK+L PRE+TG+PVGEV+ VS MH+RKAEMAR ADAFIALPGGYGTLEELLEVITWAQLGIH+KPVGLLNVDGFYN LLSF+D AV+EGFI+ ARRIIISAPTAK+LV +LE
Sbjct: 57 FRRICVYCGSAKGKKPSYQDAAVDLGKELVERGIDLVYGGGSIGLMGLVSHAVHAGGRHVIGIIPKSLMPREVTGEPVGEVRAVSGMHERKAEMARFADAFIALPGGYGTLEELLEVITWAQLGIHKKPVGLLNVDGFYNPLLSFIDLAVNEGFITEEARRIIISAPTAKELVMKLE 233
BLAST of gene-KPL71_018625-mRNA3 vs. DB:SwissProt
Match: LOG_ORYSJ (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG OS=Oryza sativa subsp. japonica OX=39947 GN=LOG PE=1 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 8.837e-93 Identity = 144/182 (79.12%), Postives = 166/182 (91.21%), Query Frame = 1 Query: 7 DTKSRFKRICVFCGSSSGKKPTYQEAAVELGKELVERKIDXXXXXXXXXXXXXXSQAVHDGGRHVLGVIPKTLTPREITGDPVGEVKTVSDMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGFYNSLLSFVDKAVDEGFISPTARRIIISAPTAKKLVRQLE 552
+ +SRF+RICV+CGS+ G+K +YQ+AAVELGKELVER IDLVYGGGS+GLMGLVS AVHDGGRHV+GVIPK+L PRE+TG+PVGEV+ VS MH+RKAEMAR ADAFIALPGGYGTLEELLEVITWAQLGIH+KPVGLLNVDGFY+ LSF+D AV EGFI+ ARRIIISAPTA++LV +LE
Sbjct: 30 ERRSRFRRICVYCGSAKGRKASYQDAAVELGKELVERGIDLVYGGGSIGLMGLVSHAVHDGGRHVIGVIPKSLMPREVTGEPVGEVRAVSGMHERKAEMARFADAFIALPGGYGTLEELLEVITWAQLGIHKKPVGLLNVDGFYDPFLSFIDMAVSEGFIAEDARRIIISAPTARELVLKLE 211
BLAST of gene-KPL71_018625-mRNA3 vs. DB:SwissProt
Match: LOGL3_ORYSJ (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL3 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL3 PE=2 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 1.536e-92 Identity = 145/185 (78.38%), Postives = 166/185 (89.73%), Query Frame = 1 Query: 13 KSRFKRICVFCGSSSGKKPTYQEAAVELGKELVERKIDXXXXXXXXXXXXXXSQAVHDGGRHVLGVIPKTLTPREITGDPVGEVKTVSDMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGFYNSLLSFVDKAVDEGFISPTARRIIISAPTAKKLVRQLEHKSRY 567
+SRFKR CVFCGSS G K TY++AAV+L KELV R IDLVYGGGS+GLMGLVSQAV+DGGRHV+GVIPKTL EI G+ VGEV+ VSDMHQRKAEMARQ+DAFIALPGGYGTLEELLEVITWAQLGIH KPVGLLNVDG+YNSLL+F+D+AV+EGFISP+ARRII+SAPTA++L+ +LE Y
Sbjct: 10 ESRFKRTCVFCGSSQGNKTTYRDAAVDLAKELVARGIDLVYGGGSIGLMGLVSQAVYDGGRHVIGVIPKTLMTPEIIGETVGEVRPVSDMHQRKAEMARQSDAFIALPGGYGTLEELLEVITWAQLGIHHKPVGLLNVDGYYNSLLTFIDQAVEEGFISPSARRIIVSAPTAQELMDKLEEYVPY 194 The following BLAST results are available for this feature:
BLAST of gene-KPL71_018625-mRNA3 vs. DB:SwissProt
Analysis Date: 2023-04-17 (BLAST: C. sinensis DVS_B v1.0) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro: C. sinensis DVS_B v1.0
Date Performed: 2023-04-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >gene-KPL71_018625-mRNA3_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018625-mRNA3_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018625-mRNA3; organism=Citrus sinensis; type=mRNA; length=597bpback to top protein sequence of gene-KPL71_018625-mRNA3_Citrus_sinensis_DVS_B_v1 >gene-KPL71_018625-mRNA3_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018625-mRNA3_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018625-mRNA3_Citrus_sinensis_DVS_B_v1; organism=Citrus sinensis; type=polypeptide; length=198bpback to top mRNA from alignment at CM039175.1_Chr6_DVS_B:19797039..19801345+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=4307bp; location=Sequence derived from: CM039175.1_Chr6_DVS_B:19797039..19801345+ (Citrus sinensisback to top Coding sequence (CDS) from alignment at CM039175.1_Chr6_DVS_B:19797039..19801345+ >gene-KPL71_018625-mRNA3_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018625-mRNA3_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018625-mRNA3; organism=Citrus sinensis; type=CDS; length=597bp; location=Sequence derived from: CM039175.1_Chr6_DVS_B:19797039..19801345+ (Citrus sinensisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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