gene-KPL71_018633-mRNA2
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of gene-KPL71_018633-mRNA2 vs. DB:SwissProt
Match: OPF13_ARATH (Transcription repressor OFP13 OS=Arabidopsis thaliana OX=3702 GN=OFP13 PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 4.211e-31 Identity = 86/215 (40.00%), Postives = 114/215 (53.02%), Query Frame = 1 Query: 7 KKMKLPFLSKNTHTLAKSSSSWPWPSCHQTRTLSFRNYNDNNSTNGAMFKTINLAYLD-------------AETTESSLFTNXXXXXXXXXXXXXXXXXXNGDPVETVIRGL-RSERLFFEPGETSSILEE-----------------AKTSGFPYKE-SLVCSMESQDPYVDFKKSMVEMVEAHG--LKDWEDLEELLCWYLRMNGKSNHGYIV 549 KKMKL L K + P C+ +TLSFR +D M KT+N + D AET ES FTN+S ++ ++ S + + +E V+RG+ RSERLFF+PG TSSILEE + P +E S+ +MES+DPY DF++SM EMV +HG KDWE LE +L WYLRMNG+ +HG IV Sbjct: 4 KKMKLSSLFK-----GGAGGLLAVPLCYNAKTLSFRVGDD-------MIKTVNSVFFDHHHNNNNGGDLLEAETPES-WFTNSSETASHSTESDQDL---DAESLEMVVRGVVRSERLFFDPGVTSSILEEIEEKSKSDLKSKETVAVGEDRSTPIEEISVAVAMESEDPYGDFRRSMEEMVTSHGELAKDWESLESMLAWYLRMNGRKSHGVIV 202
BLAST of gene-KPL71_018633-mRNA2 vs. DB:SwissProt
Match: OPF15_ARATH (Transcription repressor OFP15 OS=Arabidopsis thaliana OX=3702 GN=OFP15 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.978e-21 Identity = 55/104 (52.88%), Postives = 69/104 (66.35%), Query Frame = 1 Query: 274 DPVETVIRGLRS-ERLFFE-PGETSSILEEAKTS--------GFPYKESLVCSMESQDPYVDFKKSMVEMVEAHGL-KDWEDLEELLCWYLRMNGKSNHGYIVG 552 D VE VI+GLRS ERL FE GET+SILEEA + GF ++ S+ES DPY DFK+SM EMVEAH L DW+ LE+LL +L++N K++H YI Sbjct: 66 DSVENVIKGLRSSERLIFESKGETNSILEEATSKREEEDEEEGF-----MLFSLESDDPYSDFKRSMEEMVEAHALHHDWKSLEKLLLQFLKVNAKTSHRYIFA 164
BLAST of gene-KPL71_018633-mRNA2 vs. DB:SwissProt
Match: OFP18_ARATH (Transcription repressor OFP18 OS=Arabidopsis thaliana OX=3702 GN=OFP18 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 5.008e-16 Identity = 47/95 (49.47%), Postives = 64/95 (67.37%), Query Frame = 1 Query: 280 VETVIRGLRS-ERLFFEP-GETSSILEEAKTSGFPYKES---LVCSMESQDPYVDFKKSMVEMVEAHGL-KDWEDLEELLCWYLRMNGKSNHGYI 546 +E VI+GL+S +RL FE G ++SILEEA +E ++ S+ES DPY DFK SM +MVE H L DW LE+LL W+L++N K++H YI Sbjct: 95 IENVIKGLKSSKRLIFERRGTSNSILEEATKRDDHEEEEDGLMLLSLESNDPYTDFKNSMEKMVEVHVLHHDWISLEKLLFWFLKVNVKASHRYI 189
BLAST of gene-KPL71_018633-mRNA2 vs. DB:SwissProt
Match: OFP8_ORYSJ (Transcription repressor OFP8 OS=Oryza sativa subsp. japonica OX=39947 GN=OFP8 PE=1 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 8.330e-7 Identity = 23/56 (41.07%), Postives = 37/56 (66.07%), Query Frame = 1 Query: 382 KESLVCSMESQDPYVDFKKSMVEMVEAHGLKDWEDLEELLCWYLRMNGKSNHGYIV 549 KES+ ++ES +PY DF++SMV+MV + W+DL +LL +L +N +H I+ Sbjct: 152 KESVAVAVESAEPYEDFRESMVQMVVEKEIYAWDDLNDLLHQFLSLNSPRHHPLIL 207 The following BLAST results are available for this feature:
BLAST of gene-KPL71_018633-mRNA2 vs. DB:SwissProt
Analysis Date: 2023-04-17 (BLAST: C. sinensis DVS_B v1.0) Total hits: 4 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro: C. sinensis DVS_B v1.0
Date Performed: 2023-04-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >gene-KPL71_018633-mRNA2_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018633-mRNA2_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018633-mRNA2; organism=Citrus sinensis; type=mRNA; length=807bpback to top protein sequence of gene-KPL71_018633-mRNA2_Citrus_sinensis_DVS_B_v1 >gene-KPL71_018633-mRNA2_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018633-mRNA2_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018633-mRNA2_Citrus_sinensis_DVS_B_v1; organism=Citrus sinensis; type=polypeptide; length=268bpback to top mRNA from alignment at CM039175.1_Chr6_DVS_B:19853307..19854113- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=807bp; location=Sequence derived from: CM039175.1_Chr6_DVS_B:19853307..19854113- (Citrus sinensisback to top Coding sequence (CDS) from alignment at CM039175.1_Chr6_DVS_B:19853307..19854113- >gene-KPL71_018633-mRNA2_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018633-mRNA2_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018633-mRNA2; organism=Citrus sinensis; type=CDS; length=807bp; location=Sequence derived from: CM039175.1_Chr6_DVS_B:19853307..19854113- (Citrus sinensisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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