Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| rna-gnl|WGS:JAHMIT|DVS6B01598.t01-exon1 | rna-gnl|WGS:JAHMIT|DVS6B01598.t01-exon1_Citrus_sinensis_DVS_B_v1 | Citrus sinensis | exon |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| rna-gnl|WGS:JAHMIT|DVS6B01598.t01-CDS1 | rna-gnl|WGS:JAHMIT|DVS6B01598.t01-CDS1_Citrus_sinensis_DVS_B_v1 | Citrus sinensis | CDS |
The following polypeptide feature(s) derives from this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| gene-KPL71_018701-mRNA1_Citrus_sinensis_DVS_B_v1 | gene-KPL71_018701-mRNA1_Citrus_sinensis_DVS_B_v1 | Citrus sinensis | polypeptide |
| gene-KPL71_018701-mRNA1_Citrus_sinensis_DVS_B_v1 | gene-KPL71_018701-mRNA1_Citrus_sinensis_DVS_B_v1-protein | Citrus sinensis | polypeptide |
Sequences
The
following sequences are available for this feature:
mRNA sequence
>gene-KPL71_018701-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018701-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018701-mRNA1; organism=Citrus sinensis; type=mRNA; length=2561bp
CTCTTACTCttaattagaattaaatagaAATCCAACTCTCAGAAAAGTGT
AATAGAGCACCAAAAGCAGAAGACATGGGGAATTGCTTAATGCTTGAAGA
AAAAGTGATTAAGGTGATGAAAACAGATGGGAAAATCCTTGAGTATAAAG
CCCCCATGAAAGTTCAGGACGTGCTGGCAGAATTTGCAGGCCATGCAATT
TCTGATTCGTTTCCTGAAATCAGGCATCTCATGCCAGACTTTAAACTCCT
TGGTGGGAACTTATACTTTCTTGTTCCTGTTCCATTGCCATCCCCCAAAG
TCGAGAAAAAGAAGGTGAGGTTTTCGGAGGAAGAAGCCAGAGACGGAGCC
AAAGAAACAAGCAGTGTTGTGAGGATTAAGGTGGTGATCAGTAAGCAAGA
GCTGCAGGATTTGCAGATGCTGCAGAAAGGAGGAGTAGTTTCAGTTCAAG
ATGTGGCTTCTTGGCTTCAGGGTAAACAAAGCACCAATTCTCAGGCCGTT
GGTTTCCAGGATGGCGGTAATAACAACGAAGGGTGGAAGCCTGAGTTGGA
AAGTATACCTGAAGTTGACTAGCAAATCATGCAAATATTATGTATACTTG
TTTATCTCTTTTGATAATATCTTCTTTAGtttaacattaaaaacatAGAG
ATAGTGAAACTATGACAGAACTTCAGTATCTATCCTTTTGTTGCTCGTTA
CTCTTGCAAAATTTAGGTTGCATTAATATGATATTGAAACGTAATACTAC
ActagaaacaataaaattagattcccaaccaaaattattaatcaataaaC
ACTAAATATCGGCATAAGAAAACGAAAAGGGCACATATAATAATTTGGca
tgatatatatatacatctatatatatatatatatttagaggATCGATCTT
AATTAATAGCAATCGaaaagaatcaaaacaaagatgaaaagaaaaacaaa
tcaatgtAAGAATATTATTGTCTAAATCATTGTTAATCAATCATTCAATC
AATtgaggtttttatttttatttttattttttgggcctattaaaaattaa
taagagtgTTAACTATTTTCAAGCATATTTATAAGAGTGATAACTATTTT
CAAACATATTTATGaggtttattattatatgagcAGTGTAATAcatctca
aaatttaattttaaaattttatcctaaaCCATGTGCCATGCTACTTGTAA
ATGACACATCACAAGATACATTATTTaggattaaatttaaaataaaattt
taaaatatctaacattattcttattattatatatgatgtaaaaaaatgaa
tgctACCTTTatcaaaagtaaaattatgaAGACTATCCAAAATTCAACCT
CAAGCTAATAGGTAGGGGTTTAATTACTTGTGGTGTTTAAAGTTACAACG
AATACAATGACCACATAATACGAGAAGTTAAAAAGTCGATGGTTGTTAAT
TACAAgctaaatataattattagagGTTGACGAATTCATCTTGAAGCTGC
AGCCGAGACATAATTGAACCACAGAGAAATTCTAAAAGGCGGTGCCGCCC
AACCATAGAGAGACAAGTGTCGCGGTCTCGAGTGCCATGTCAGCCGGCCA
AGCATTCCTTTCTGCCAAGTCTAGAAGCGACAAaacgacaaaaaaaaaaa
aaagagagcgAGAATGTCTTGAGGAGGGAAAATTAAAGTTTCTTTTGGAA
AGTGCGTGTAAAAACAGAGAAGAAAATCTAGGAGTTGGAAAATGGAAAAC
GAATATTTGTCTGTGTTGAAAGTTTCAGTTGCTTTCCCAGTTCAATTAAG
TGGTTCAAGGCCTATCGTTTactgcaaaatcaaattggaATTCAGTGTAT
GTACTTCGACAAATGGAGTAGCTAGATCCAAAGAGCCATCGACCAAGATA
ACTAAACTACTAGCTAgcataaagaagaagaataagagaAATGATCAACg
gcaaaataaatgtaaaggaaaaaaaaaaaaggaataaggATGAATGAATA
ATTCAAAGTTTATACTGCAACTGATCTGATCATCGACTTCGTCGCACCGT
ATCAGTTGTTATATTAGTGTAGATACAAGTTTTTATGTCCCATTTTCATT
AAGTGTGAGTGTAATAATCACGTAAAAATCTTTCTCAATAGAGATATATA
AGTGCACATATAGTAAAAATCAAGATTATAATCGCATGCACATATGAAAA
CAATGAATTTCATTGTATGACAAGAGTCATAATCATATCATGCGTATAAA
TATGATAAATGAATACCAAATTatgataattgattatttttctttattac
aaTTTGATCTAAATTTATGCGTGCTTAACACcgatctaaaattaataaga
ttgaAGGTTTGTATGTTTAACTTACAAATAGCTGCATGGCGCATGCTACA
ATAACTgctaaccaaaaaaaaaaaaaaacttaaattattttttcataaat
aaaataatattaattattcataATCATTATACAACTGTGATATTATACCA
CAGTTGTTTTAGTCATTGGATTCAGTTATGGTGAGAGATCTAATAACTGG
GTGCAACTGTG
back to topprotein sequence of gene-KPL71_018701-mRNA1_Citrus_sinensis_DVS_B_v1
>gene-KPL71_018701-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018701-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018701-mRNA1_Citrus_sinensis_DVS_B_v1; organism=Citrus sinensis; type=polypeptide; length=165bp
MGNCLMLEEKVIKVMKTDGKILEYKAPMKVQDVLAEFAGHAISDSFPEIR
HLMPDFKLLGGNLYFLVPVPLPSPKVEKKKVRFSEEEARDGAKETSSVVR
IKVVISKQELQDLQMLQKGGVVSVQDVASWLQGKQSTNSQAVGFQDGGNN
NEGWKPELESIPEVD
back to topmRNA from alignment at CM039175.1_Chr6_DVS_B:20247705..20250265+
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
> ID=; Name=; organism= ; type=; length=2561bp; location=Sequence derived from: CM039175.1_Chr6_DVS_B:20247705..20250265+ (Citrus sinensis
CTCTTACTCttaattagaattaaatagaAATCCAACTCTCAGAAAAGTGT
AATAGAGCACCAAAAGCAGAAGACATGGGGAATTGCTTAATGCTTGAAGA
AAAAGTGATTAAGGTGATGAAAACAGATGGGAAAATCCTTGAGTATAAAG
CCCCCATGAAAGTTCAGGACGTGCTGGCAGAATTTGCAGGCCATGCAATT
TCTGATTCGTTTCCTGAAATCAGGCATCTCATGCCAGACTTTAAACTCCT
TGGTGGGAACTTATACTTTCTTGTTCCTGTTCCATTGCCATCCCCCAAAG
TCGAGAAAAAGAAGGTGAGGTTTTCGGAGGAAGAAGCCAGAGACGGAGCC
AAAGAAACAAGCAGTGTTGTGAGGATTAAGGTGGTGATCAGTAAGCAAGA
GCTGCAGGATTTGCAGATGCTGCAGAAAGGAGGAGTAGTTTCAGTTCAAG
ATGTGGCTTCTTGGCTTCAGGGTAAACAAAGCACCAATTCTCAGGCCGTT
GGTTTCCAGGATGGCGGTAATAACAACGAAGGGTGGAAGCCTGAGTTGGA
AAGTATACCTGAAGTTGACTAGCAAATCATGCAAATATTATGTATACTTG
TTTATCTCTTTTGATAATATCTTCTTTAGtttaacattaaaaacatAGAG
ATAGTGAAACTATGACAGAACTTCAGTATCTATCCTTTTGTTGCTCGTTA
CTCTTGCAAAATTTAGGTTGCATTAATATGATATTGAAACGTAATACTAC
ActagaaacaataaaattagattcccaaccaaaattattaatcaataaaC
ACTAAATATCGGCATAAGAAAACGAAAAGGGCACATATAATAATTTGGca
tgatatatatatacatctatatatatatatatatttagaggATCGATCTT
AATTAATAGCAATCGaaaagaatcaaaacaaagatgaaaagaaaaacaaa
tcaatgtAAGAATATTATTGTCTAAATCATTGTTAATCAATCATTCAATC
AATtgaggtttttatttttatttttattttttgggcctattaaaaattaa
taagagtgTTAACTATTTTCAAGCATATTTATAAGAGTGATAACTATTTT
CAAACATATTTATGaggtttattattatatgagcAGTGTAATAcatctca
aaatttaattttaaaattttatcctaaaCCATGTGCCATGCTACTTGTAA
ATGACACATCACAAGATACATTATTTaggattaaatttaaaataaaattt
taaaatatctaacattattcttattattatatatgatgtaaaaaaatgaa
tgctACCTTTatcaaaagtaaaattatgaAGACTATCCAAAATTCAACCT
CAAGCTAATAGGTAGGGGTTTAATTACTTGTGGTGTTTAAAGTTACAACG
AATACAATGACCACATAATACGAGAAGTTAAAAAGTCGATGGTTGTTAAT
TACAAgctaaatataattattagagGTTGACGAATTCATCTTGAAGCTGC
AGCCGAGACATAATTGAACCACAGAGAAATTCTAAAAGGCGGTGCCGCCC
AACCATAGAGAGACAAGTGTCGCGGTCTCGAGTGCCATGTCAGCCGGCCA
AGCATTCCTTTCTGCCAAGTCTAGAAGCGACAAaacgacaaaaaaaaaaa
aaagagagcgAGAATGTCTTGAGGAGGGAAAATTAAAGTTTCTTTTGGAA
AGTGCGTGTAAAAACAGAGAAGAAAATCTAGGAGTTGGAAAATGGAAAAC
GAATATTTGTCTGTGTTGAAAGTTTCAGTTGCTTTCCCAGTTCAATTAAG
TGGTTCAAGGCCTATCGTTTactgcaaaatcaaattggaATTCAGTGTAT
GTACTTCGACAAATGGAGTAGCTAGATCCAAAGAGCCATCGACCAAGATA
ACTAAACTACTAGCTAgcataaagaagaagaataagagaAATGATCAACg
gcaaaataaatgtaaaggaaaaaaaaaaaaggaataaggATGAATGAATA
ATTCAAAGTTTATACTGCAACTGATCTGATCATCGACTTCGTCGCACCGT
ATCAGTTGTTATATTAGTGTAGATACAAGTTTTTATGTCCCATTTTCATT
AAGTGTGAGTGTAATAATCACGTAAAAATCTTTCTCAATAGAGATATATA
AGTGCACATATAGTAAAAATCAAGATTATAATCGCATGCACATATGAAAA
CAATGAATTTCATTGTATGACAAGAGTCATAATCATATCATGCGTATAAA
TATGATAAATGAATACCAAATTatgataattgattatttttctttattac
aaTTTGATCTAAATTTATGCGTGCTTAACACcgatctaaaattaataaga
ttgaAGGTTTGTATGTTTAACTTACAAATAGCTGCATGGCGCATGCTACA
ATAACTgctaaccaaaaaaaaaaaaaaacttaaattattttttcataaat
aaaataatattaattattcataATCATTATACAACTGTGATATTATACCA
CAGTTGTTTTAGTCATTGGATTCAGTTATGGTGAGAGATCTAATAACTGG
GTGCAACTGTG
back to topCoding sequence (CDS) from alignment at CM039175.1_Chr6_DVS_B:20247705..20250265+
>gene-KPL71_018701-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018701-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018701-mRNA1; organism=Citrus sinensis; type=CDS; length=498bp; location=Sequence derived from: CM039175.1_Chr6_DVS_B:20247705..20250265+ (Citrus sinensis
ATGGGGAATTGCTTAATGCTTGAAGAAAAAGTGATTAAGGTGATGAAAAC
AGATGGGAAAATCCTTGAGTATAAAGCCCCCATGAAAGTTCAGGACGTGC
TGGCAGAATTTGCAGGCCATGCAATTTCTGATTCGTTTCCTGAAATCAGG
CATCTCATGCCAGACTTTAAACTCCTTGGTGGGAACTTATACTTTCTTGT
TCCTGTTCCATTGCCATCCCCCAAAGTCGAGAAAAAGAAGGTGAGGTTTT
CGGAGGAAGAAGCCAGAGACGGAGCCAAAGAAACAAGCAGTGTTGTGAGG
ATTAAGGTGGTGATCAGTAAGCAAGAGCTGCAGGATTTGCAGATGCTGCA
GAAAGGAGGAGTAGTTTCAGTTCAAGATGTGGCTTCTTGGCTTCAGGGTA
AACAAAGCACCAATTCTCAGGCCGTTGGTTTCCAGGATGGCGGTAATAAC
AACGAAGGGTGGAAGCCTGAGTTGGAAAGTATACCTGAAGTTGACTAG
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