gene-KPL71_018827-mRNA1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of gene-KPL71_018827-mRNA1 vs. DB:SwissProt
Match: SUA_ARATH (SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana OX=3702 GN=SUA PE=1 SV=2) HSP 1 Score: 755.362 bits (1949), Expect = 0.000e+0 Identity = 470/816 (57.60%), Postives = 561/816 (68.75%), Query Frame = 3 Query: 1062 HYAVAPSGTIVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGVSRGFAFIDFPSVVLLPSSWVNLTIFCFNFDELTTREAIVVEQGAARAMMDRIGDDGLVVDGRKLFFEYSSKPTGGSGGHYGQESAMGARHSNHKSTI-PCDWMCTICGCVNFARRTSCFQCNEARTDDAPPAEMNSSNPIPLGKKGSDTGPTHVLVVRGLDEYADEEMLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFLHFHSVEDASKALEATNGTTLEKNGQILRVAYAKSILGPGXXXXXXXXXXXXXXXXXXXXXXXQQYDAVGWAPKEYNPDDKQPTGGQEQRSDGDMVQKDGLALQSGFVWDEASGYYYDAASGFYYDGNTGLYYDGNSGIWYSYDQQTQQYIPCTDQNDNKTSGNGSEPSKQVDGGFKNRKVVISAPAATVSSVEKPASLPDAVQXXXXXXXXXXXXXXXXXXXXXXXXXXTIVANKKKLNNA-TMWKQWSH------------DNQQSASADDRPGPAGQTSKTKFKSDSAATKENNTFSSGAGAPTAIPQAVGLDXXXXXXXXXXXXXXXLMGVIRNSGRGFQXXXXXXXXXXXXXXXXXXXXXXXVNSDTITAVTPFRTDASALGSYTPPVATGSGKRRFSEMPLPPATQKEQPQTTYRDRAAERRSLYGSSFSAGDDLPDVGSGDSNRDF-ALKKGSVDSMPFPPGVGGRGFTADS-VQSYEVITADKAIDENNVGNRMLRSMGWHEGLGLGKDGSGMIEPVQAQAMDSRAGLGSQQKKVDPSLEVQAGDSYKTLIHKKALARFREMS 3461 H++ PS T+VVKGLS K+TEEDLYQILAEWGPL HVRVI+E+NSG+SRGFAFIDFP+V AAR MMDRI DG+V+DGRKL F YS +PTG +G QE A + ++ I P DW+CTICGC+NFARRTSCFQCNE +T D+P A++ SN GK+ S+TGPTHVLVVRGLDE ADEEMLRYEFSKHAPIKDLRLVRDKFTHVSRGFAF+HF+SVEDA+KALEATN T LE+NG+ILRVAYAKS+ G G+G+SA S S++LAAAAIEAA FSQQYD VGWAPKEYN +KQ TGGQ Q QK A QSG+VWDEASGYYYDAASG+YYDGN+GLYYD NSG+WYSYDQQTQQY+PC DQN N++ ++P +KV+IS AAT +VEK SLPDAVQAAA AAIA+EK+ KE+ KE+K+ SK++++A+KKK++N TMWKQ SH DN + SA+ R + S K KSD KE +T + G A T + SST+GGTLMGV+R S G + +S + P AS +GSG+RRFSE P T +EQPQT+YRDRAAERR+LYGSS S+G+D+ DS+ D L+KGS D PFPPGVGGRG T + V S++VIT ++AIDE+NVGNRMLR+MGWHEG GLGKDGSGM EPVQAQ +D RAGLGSQQKKVD EVQ GD+Y+TL+HKKALARFR+MS Sbjct: 265 HFSATPSATVVVKGLSMKSTEEDLYQILAEWGPLHHVRVIREQNSGISRGFAFIDFPTV------------------------------DAARTMMDRIEHDGIVLDGRKLMFHYS-QPTGRAGVSRRQEHASRRSYGGSRNMIVPTDWICTICGCINFARRTSCFQCNEPKTKDSPSADVGLSNSA-AGKRISETGPTHVLVVRGLDEDADEEMLRYEFSKHAPIKDLRLVRDKFTHVSRGFAFVHFYSVEDATKALEATNRTALERNGKILRVAYAKSVHGSGTGISAPSHSNNLAAAAIEAATFSQQYDGVGWAPKEYNTGEKQNTGGQAQGVGEIESQKGTSAPQSGYVWDEASGYYYDAASGYYYDGNSGLYYDSNSGLWYSYDQQTQQYVPCPDQN-NESKVTENQPDSAKKEKSSQQKVIIS--AATTPNVEKVLSLPDAVQAAAAAAIASEKREKERVKEIKLASKTSLLASKKKMSNVLTMWKQRSHETQIQRPSPSLGDNPPTVSAEARSSFSTGQSMGKLKSDVIIAKERSTSNHGVSALTTAESSS-----------SSTTGGTLMGVMRGSFGG---------------------TLGGASSSASVQMPPILPSASPASV----SVSGSGRRRFSETPTAGPTHREQPQTSYRDRAAERRNLYGSSTSSGNDVI-----DSSEDLMGLRKGSSDPTPFPPGVGGRGITTSTEVSSFDVITEERAIDESNVGNRMLRNMGWHEGSGLGKDGSGMKEPVQAQGVDRRAGLGSQQKKVDAEFEVQPGDTYRTLLHKKALARFRDMS 1004 HSP 2 Score: 125.946 bits (315), Expect = 8.062e-28 Identity = 109/228 (47.81%), Postives = 132/228 (57.89%), Query Frame = 3 Query: 225 MDPGRYGLQQGWDNNSALEGYGAIHEPNFRVGGSYDERRFLDERYSRDNIYPRNAFQRENYPP--PPVGLWPQSRRRNYEEDYSLDRESRRHEKPYIDSYHEMDAYCGHEIDSFPEFDKFRDGYRNIENYRDHGFERPPRFGGXXXXXXXXXXXXXXXXXXHQSREDSREGDCDFGRLXXXXXXXXXXXXXXXXXXH--------------ESRDRERDKRCLSRERE 860 MDP RYG QQ WDNNSA EGYG H+PN R G SYD+ + DER RD++Y NYPP +G PQSR+RNYEE+Y E RR EKPYIDS + D Y E S R+G+ YRDH ER R+ G D +D +YRS++ H SR+D RE D D+ R SYDS+Y+R S RDGS + +SRDRE DKRC SRER+ Sbjct: 1 MDPSRYGRQQEWDNNSAPEGYGTQHDPNHRFGVSYDD-GYPDERLMRDDVY--------NYPPGHNTLGDLPQSRKRNYEENYP--SELRRQEKPYIDSNYAADYYHDSEAGS-------RNGH-----YRDHEHERSSRYDG--CDDYSCNDNNYRSKNYHHSRDDGREKDYDYTRRSYDSEYERASVRDGSRKSRDPQDRERNSRDREWDSRDREWDKRCYSRERD 203
BLAST of gene-KPL71_018827-mRNA1 vs. DB:SwissProt
Match: RBM5B_XENLA (RNA-binding protein 5-B OS=Xenopus laevis OX=8355 GN=rbm5-b PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.072e-15 Identity = 59/159 (37.11%), Postives = 77/159 (48.43%), Query Frame = 3 Query: 2985 TQKEQP-QTTYRDRAAERRSLYGSSFSAGDDLPDVGSGDSNRDFALKKGSVDSMPFPPGVGGRGFTADSVQSYEVITADKAIDENNVGNRMLRSMGWHEGLGLGKDGSGMIEPVQAQAMDSRAGLGSQQKKVDPSLEVQAGDSYKTLIHKKALARFREM 3458 T++E+P YRDRAAERR YG +P PP + F +V +YE T D ID +N+GN+ML++MGW EG GLG+ G+ P+QAQ AGLG++ S V DSYK + K ARF EM Sbjct: 626 TEEEKPPNAKYRDRAAERREKYG------------------------------IPEPPEPKRKRFDP-TVVNYEQPTKD-GIDNSNIGNKMLQAMGWKEGSGLGRKSQGITAPIQAQVRMRGAGLGAK----GSSYGVNTSDSYKDAVKKAMFARFSEM 748 HSP 2 Score: 83.1889 bits (204), Expect = 1.018e-14 Identity = 75/283 (26.50%), Postives = 122/283 (43.11%), Query Frame = 3 Query: 1080 SGTIVVKGLSQKTTEEDLYQILAEW-GPL-RHVRVIKERNSGVSRGFAFIDFPSVVLLPSSWVNLTIFCFNFDELTTREAIVVEQGAARAMMDRIGDDGLVVDGRKLFFEYSSKPTGGSGGHYGQESAMGARHSNHKSTIPCDWMCTICGCVNFARRTSCFQCNEARTDDAPPAEMNSSNPIPLGKKGSDTG-PTHVLVVRGLDEYADEEMLRYEFSKHAP-----IKDLRLVRDKFTHVSRGFAFLHFHSVEDASKALE--ATNGTTLEKNGQILRVAYAKS 1898 S TI+++GL E D+ +++ + GP VR++K R +G+SRGFAF++F + Q A R M LV+ G+ + YS N + DW+C CG NF RR CF+C A+ + A SS SD+G + +++R + + + + S AP + ++RL++DK T +RGFAF+ S +AS+ L+ T L+ +G+ + V +AKS Sbjct: 101 SKTIMLRGLPININENDIRELVESFEGPQPADVRLMK-RKTGLSRGFAFVEFYHL-----------------------------QDATRWM--EANQKKLVIQGKTIAMHYS----------------------NPRPKFE-DWLCNKCGLYNFRRRLKCFRCGAAKAESDMEAPSGSSETPQSADYYSDSGYVSSAIILRNIGPHTVVDSI---LSALAPYVSLVVSNIRLIKDKQTQQNRGFAFVQLPSALEASQLLQILQTLHPPLKIDGKTIGVDFAKS 325
BLAST of gene-KPL71_018827-mRNA1 vs. DB:SwissProt
Match: RBM5A_XENLA (RNA-binding protein 5-A OS=Xenopus laevis OX=8355 GN=rbm5-a PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.100e-15 Identity = 60/159 (37.74%), Postives = 78/159 (49.06%), Query Frame = 3 Query: 2982 ATQKEQPQTTYRDRAAERRSLYGSSFSAGDDLPDVGSGDSNRDFALKKGSVDSMPFPPGVGGRGFTADSVQSYEVITADKAIDENNVGNRMLRSMGWHEGLGLGKDGSGMIEPVQAQAMDSRAGLGSQQKKVDPSLEVQAGDSYKTLIHKKALARFREM 3458 A Q E+ ++ YRDRAAERR YG +P PP + F A +V +YE T D ID +N+GN+ML++MGW EG GLG+ G+ P+QAQ AGLG++ S V DSYK + K ARF EM Sbjct: 711 AEQTER-ESKYRDRAAERRVKYG------------------------------IPEPPEPKRKRF-APTVVNYEQPTKD-GIDNSNIGNKMLQAMGWKEGSGLGRKSQGITAPIQAQVRMRGAGLGAK----GSSYGVNTSDSYKDAVRKAMFARFSEM 832 HSP 2 Score: 80.8777 bits (198), Expect = 5.233e-14 Identity = 73/283 (25.80%), Postives = 122/283 (43.11%), Query Frame = 3 Query: 1080 SGTIVVKGLSQKTTEEDLYQILAEW-GPL-RHVRVIKERNSGVSRGFAFIDFPSVVLLPSSWVNLTIFCFNFDELTTREAIVVEQGAARAMMDRIGDDGLVVDGRKLFFEYSSKPTGGSGGHYGQESAMGARHSNHKSTIPCDWMCTICGCVNFARRTSCFQCNEARTDDAPPAEMNSSNPIPLGKKGSDTG-PTHVLVVRGLDEYADEEMLRYEFSKHAP-----IKDLRLVRDKFTHVSRGFAFLHFHSVEDASKALE--ATNGTTLEKNGQILRVAYAKS 1898 S TI+++GL E D+ +++ + GP VR++K R +G+SRGFAF++F + +SW+ LV+ G+ + YS N + DW+C CG NF RR CF+C A+ + A SS SD+G + +++R + + + + S AP + ++RL++DK T +RGFAF+ S +AS+ L+ T L+ +G+ + V +AKS Sbjct: 101 SKTIMLRGLPININENDIRELVESFEGPQPADVRLMK-RKTGLSRGFAFVEFYHLQD-STSWME------------------------------ANQKKLVIQGKTIAMHYS----------------------NPRPKFE-DWLCNKCGLYNFRRRLKCFRCGAAKAESDMEAPSGSSEAPQSADYYSDSGYVSSAIILRNIGPHTVVDSI---LSALAPYVSLVVSNIRLIKDKQTQQNRGFAFVQLPSALEASQLLQILQTLHPPLKIDGKTIGVDFAKS 325
BLAST of gene-KPL71_018827-mRNA1 vs. DB:SwissProt
Match: RBM5_XENTR (RNA-binding protein 5 OS=Xenopus tropicalis OX=8364 GN=rbm5 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.469e-15 Identity = 61/170 (35.88%), Postives = 80/170 (47.06%), Query Frame = 3 Query: 2949 KRRFSEMPLPPATQKEQPQTTYRDRAAERRSLYGSSFSAGDDLPDVGSGDSNRDFALKKGSVDSMPFPPGVGGRGFTADSVQSYEVITADKAIDENNVGNRMLRSMGWHEGLGLGKDGSGMIEPVQAQAMDSRAGLGSQQKKVDPSLEVQAGDSYKTLIHKKALARFREM 3458 + + SE L KE+ + YRDRAAERR YG +P PP + F +V +YE T D ID +N+GN+ML++MGW EG GLG+ G+ P+QAQ AGLG++ S V DSYK + K ARF EM Sbjct: 705 RSKMSEQELEALELKER-EAKYRDRAAERREKYG------------------------------IPEPPEPKRKRFDP-TVVNYEQPTKD-GIDNSNIGNKMLQAMGWKEGSGLGRKSQGITAPIQAQVRMRGAGLGAK----GSSYGVNTSDSYKDAVRKAMFARFSEM 837 HSP 2 Score: 81.2629 bits (199), Expect = 4.283e-14 Identity = 75/283 (26.50%), Postives = 123/283 (43.46%), Query Frame = 3 Query: 1080 SGTIVVKGLSQKTTEEDLYQILAEW-GPL-RHVRVIKERNSGVSRGFAFIDFPSVVLLPSSWVNLTIFCFNFDELTTREAIVVEQGAARAMMDRIGDDGLVVDGRKLFFEYSSKPTGGSGGHYGQESAMGARHSNHKSTIPCDWMCTICGCVNFARRTSCFQCNEARTDDAPPAEMNSSNPIPLGKKGSDTG-PTHVLVVRGLDEYADEEMLRYEFSKHAP-----IKDLRLVRDKFTHVSRGFAFLHFHSVEDASKALE--ATNGTTLEKNGQILRVAYAKS 1898 S TI+++GL E D+ +++ + GP VR++K R +G+SRGFAF++F + Q A R M LV+ G+ + YS N + DW+C CG NF RR CF+C A+ + A SS+ SD+G + +++R + + + + S AP + ++RL++DK T +RGFAF+ S +AS+ L+ T L+ +G+ + V +AKS Sbjct: 102 SKTIMLRGLPININENDIRELVESFEGPQPADVRLMK-RKTGLSRGFAFVEFYHL-----------------------------QDATRWM--EANQKKLVIQGKTIAMHYS----------------------NPRPKFE-DWLCNKCGLYNFRRRLKCFRCGAAKAESDLEAPSGSSDAPQSTDYYSDSGYVSSAIILRNIGPHTVVDSI---LSALAPYVSLVVSNIRLIKDKQTQQNRGFAFVQLPSTLEASQLLQILQTLHPPLKIDGKTVGVDFAKS 326
BLAST of gene-KPL71_018827-mRNA1 vs. DB:SwissProt
Match: RBM5_RAT (RNA-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Rbm5 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.827e-14 Identity = 59/171 (34.50%), Postives = 81/171 (47.37%), Query Frame = 3 Query: 2949 KRRFSEMPLPPATQKEQPQTTYRDRAAERRSLYGSSFSAGDDLPDVGSGDSNRDFALKKGSVDSMPFPPGVG-GRGFTADSVQSYEVITADKAIDENNVGNRMLRSMGWHEGLGLGKDGSGMIEPVQAQAMDSRAGLGSQQKKVDPSLEVQAGDSYKTLIHKKALARFREM 3458 + R SE L +E+ + YRDRAAERR YG +P PP + F A +V +YE T D ID +N+GN+ML++MGW EG GLG+ G+ P++AQ AGLG++ + + DSYK + K ARF EM Sbjct: 681 RSRLSEQELEALELRER-EMKYRDRAAERREKYG------------------------------IPEPPEPKRKKQFDAGTV-NYEQPTKD-GIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLGAK----GSAYGLSGADSYKDAVRKAMFARFTEM 814 HSP 2 Score: 77.411 bits (189), Expect = 5.907e-13 Identity = 71/282 (25.18%), Postives = 119/282 (42.20%), Query Frame = 3 Query: 1080 SGTIVVKGLSQKTTEEDLYQILAEW-GPL-RHVRVIKERNSGVSRGFAFIDFPSVVLLPSSWVNLTIFCFNFDELTTREAIVVEQGAARAMMDRIGDDGLVVDGRKLFFEYSSKPTGGSGGHYGQESAMGARHSNHKSTIPCDWMCTICGCVNFARRTSCFQCNEARTD---DAPPAEMNSSNPIPLGKKGSDTGPTHVLVVRGLDEYADEEMLRYEFSKHA--PIKDLRLVRDKFTHVSRGFAFLHFHSVEDASKALEATNGTT--LEKNGQILRVAYAKS 1898 S TI+++GL TE D+ +++ + GP VR++K R +GVSRGFAF++F + +SW+ LV+ G+ + YS N + DW+C C NF +R CF+C + D + PP S + DT +++R + + + + S +A + ++RL++DK T +RGFAF+ S DAS+ L+ L+ +G+ + V +AKS Sbjct: 97 SKTIMLRGLPITITESDIREMMESFEGPQPADVRLMK-RKTGVSRGFAFVEFYHLQD-ATSWME------------------------------ANQKKLVIQGKHIAMHYS----------------------NPRPKFE-DWLCNKCCLNNFRKRLKCFRCGADKFDSEQEVPPGTTESVQSVDYY---CDT-----IILRNIAPHTVVDSIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQLSSAMDASQLLQILQSLHPPLKIDGKTIGVDFAKS 315
BLAST of gene-KPL71_018827-mRNA1 vs. DB:SwissProt
Match: RBM5_BOVIN (RNA-binding protein 5 OS=Bos taurus OX=9913 GN=RBM5 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.671e-14 Identity = 59/171 (34.50%), Postives = 81/171 (47.37%), Query Frame = 3 Query: 2949 KRRFSEMPLPPATQKEQPQTTYRDRAAERRSLYGSSFSAGDDLPDVGSGDSNRDFALKKGSVDSMPFPPGVG-GRGFTADSVQSYEVITADKAIDENNVGNRMLRSMGWHEGLGLGKDGSGMIEPVQAQAMDSRAGLGSQQKKVDPSLEVQAGDSYKTLIHKKALARFREM 3458 + R SE L +E+ + YRDRAAERR YG +P PP + F A +V +YE T D ID +N+GN+ML++MGW EG GLG+ G+ P++AQ AGLG++ + + DSYK + K ARF EM Sbjct: 681 RSRLSEQELEALELRER-EMKYRDRAAERREKYG------------------------------IPEPPEPKRKKQFDAGTV-NYEQPTKD-GIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLGAK----GSAYGLSGADSYKDAVRKAMFARFTEM 814 HSP 2 Score: 76.2554 bits (186), Expect = 1.602e-12 Identity = 69/282 (24.47%), Postives = 117/282 (41.49%), Query Frame = 3 Query: 1080 SGTIVVKGLSQKTTEEDLYQILAEW-GPL-RHVRVIKERNSGVSRGFAFIDFPSVVLLPSSWVNLTIFCFNFDELTTREAIVVEQGAARAMMDRIGDDGLVVDGRKLFFEYSSKPTGGSGGHYGQESAMGARHSNHKSTIPCDWMCTICGCVNFARRTSCFQCNEARTD---DAPPAEMNSSNPIPLGKKGSDTGPTHVLVVRGLDEYADEEMLRYEFSKHA--PIKDLRLVRDKFTHVSRGFAFLHFHSVEDASKALEATNGT--TLEKNGQILRVAYAKS 1898 S TI+++GL TE D+ +++ + GP VR++K R +GVSRGFAF++F + +SW+ LV+ G+ + YS N + DW+C C NF +R CF+C + D + PP S + +++R + + + + S +A + ++RL++DK T +RGFAF+ S DAS+ L+ L+ +G+ + V +AKS Sbjct: 97 SKTIMLRGLPITITESDIREMMESFEGPQPADVRLMK-RKTGVSRGFAFVEFYHLQDA-TSWME------------------------------ANQKKLVIQGKHIAMHYS----------------------NPRPKFE-DWLCNKCCLNNFRKRLKCFRCGADKFDSEQEVPPGTTESVQSVDYY--------CDTIILRNIAPHTVVDSIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQLSSAMDASQLLQILQSLHPPLKIDGKTIGVDFAKS 315
BLAST of gene-KPL71_018827-mRNA1 vs. DB:SwissProt
Match: RBM5_HUMAN (RNA-binding protein 5 OS=Homo sapiens OX=9606 GN=RBM5 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 8.820e-14 Identity = 59/171 (34.50%), Postives = 81/171 (47.37%), Query Frame = 3 Query: 2949 KRRFSEMPLPPATQKEQPQTTYRDRAAERRSLYGSSFSAGDDLPDVGSGDSNRDFALKKGSVDSMPFPPGVG-GRGFTADSVQSYEVITADKAIDENNVGNRMLRSMGWHEGLGLGKDGSGMIEPVQAQAMDSRAGLGSQQKKVDPSLEVQAGDSYKTLIHKKALARFREM 3458 + R SE L +E+ + YRDRAAERR YG +P PP + F A +V +YE T D ID +N+GN+ML++MGW EG GLG+ G+ P++AQ AGLG++ + + DSYK + K ARF EM Sbjct: 681 RSRLSEQELEALELRER-EMKYRDRAAERREKYG------------------------------IPEPPEPKRKKQFDAGTV-NYEQPTKD-GIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLGAK----GSAYGLSGADSYKDAVRKAMFARFTEM 814 HSP 2 Score: 76.2554 bits (186), Expect = 1.483e-12 Identity = 69/282 (24.47%), Postives = 117/282 (41.49%), Query Frame = 3 Query: 1080 SGTIVVKGLSQKTTEEDLYQILAEW-GPL-RHVRVIKERNSGVSRGFAFIDFPSVVLLPSSWVNLTIFCFNFDELTTREAIVVEQGAARAMMDRIGDDGLVVDGRKLFFEYSSKPTGGSGGHYGQESAMGARHSNHKSTIPCDWMCTICGCVNFARRTSCFQCNEARTD---DAPPAEMNSSNPIPLGKKGSDTGPTHVLVVRGLDEYADEEMLRYEFSKHA--PIKDLRLVRDKFTHVSRGFAFLHFHSVEDASKALEATNGT--TLEKNGQILRVAYAKS 1898 S TI+++GL TE D+ +++ + GP VR++K R +GVSRGFAF++F + +SW+ LV+ G+ + YS N + DW+C C NF +R CF+C + D + PP S + +++R + + + + S +A + ++RL++DK T +RGFAF+ S DAS+ L+ L+ +G+ + V +AKS Sbjct: 97 SKTIMLRGLPITITESDIREMMESFEGPQPADVRLMK-RKTGVSRGFAFVEFYHLQDA-TSWME------------------------------ANQKKLVIQGKHIAMHYS----------------------NPRPKFE-DWLCNKCCLNNFRKRLKCFRCGADKFDSEQEVPPGTTESVQSVDYY--------CDTIILRNIAPHTVVDSIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQLSSAMDASQLLQILQSLHPPLKIDGKTIGVDFAKS 315
BLAST of gene-KPL71_018827-mRNA1 vs. DB:SwissProt
Match: RBM5_MOUSE (RNA-binding protein 5 OS=Mus musculus OX=10090 GN=Rbm5 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.028e-13 Identity = 59/171 (34.50%), Postives = 81/171 (47.37%), Query Frame = 3 Query: 2949 KRRFSEMPLPPATQKEQPQTTYRDRAAERRSLYGSSFSAGDDLPDVGSGDSNRDFALKKGSVDSMPFPPGVG-GRGFTADSVQSYEVITADKAIDENNVGNRMLRSMGWHEGLGLGKDGSGMIEPVQAQAMDSRAGLGSQQKKVDPSLEVQAGDSYKTLIHKKALARFREM 3458 + R SE L +E+ + YRDRAAERR YG +P PP + F A +V +YE T D ID +N+GN+ML++MGW EG GLG+ G+ P++AQ AGLG++ + + DSYK + K ARF EM Sbjct: 681 RSRLSEQELEALELRER-EMKYRDRAAERREKYG------------------------------IPEPPEPKRKKQFDAGTV-NYEQPTKD-GIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPIEAQVRLKGAGLGAK----GSAYGLSGADSYKDAVRKAMFARFTEM 814 HSP 2 Score: 77.0258 bits (188), Expect = 8.596e-13 Identity = 69/282 (24.47%), Postives = 118/282 (41.84%), Query Frame = 3 Query: 1080 SGTIVVKGLSQKTTEEDLYQILAEW-GPL-RHVRVIKERNSGVSRGFAFIDFPSVVLLPSSWVNLTIFCFNFDELTTREAIVVEQGAARAMMDRIGDDGLVVDGRKLFFEYSSKPTGGSGGHYGQESAMGARHSNHKSTIPCDWMCTICGCVNFARRTSCFQCNEARTD---DAPPAEMNSSNPIPLGKKGSDTGPTHVLVVRGLDEYADEEMLRYEFSKHA--PIKDLRLVRDKFTHVSRGFAFLHFHSVEDASKALEATNGT--TLEKNGQILRVAYAKS 1898 S TI+++GL TE D+ +++ + GP VR++K R +GVSRGFAF++F + +SW+ LV+ G+ + YS N + DW+C C NF +R CF+C + D + PP S+ + +++R + + + + S +A + ++RL++DK T +RGFAF+ S DAS+ L+ L+ +G+ + V +AKS Sbjct: 97 SKTIMLRGLPITITESDIREMMESFEGPQPADVRLMK-RKTGVSRGFAFVEFYHLQDA-TSWME------------------------------ANQKKLVIQGKHIAMHYS----------------------NPRPKFE-DWLCNKCCLNNFRKRLKCFRCGADKFDSEQEVPPGTTESAQSVDYY--------CDTIILRNIAPHTVVDSIMTALSPYASLAVNNIRLIKDKQTQQNRGFAFVQLSSAMDASQLLQILQSLHPPLKIDGKTIGVDFAKS 315
BLAST of gene-KPL71_018827-mRNA1 vs. DB:SwissProt
Match: RBM10_RAT (RNA-binding protein 10 OS=Rattus norvegicus OX=10116 GN=Rbm10 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.839e-12 Identity = 54/168 (32.14%), Postives = 77/168 (45.83%), Query Frame = 3 Query: 2958 FSEMPLPPATQKEQPQTTYRDRAAERRSLYGSSFSAGDDLPDVGSGDSNRDFALKKGSVDSMPFPPGVGGRGFTADSVQS--YEVITADKAIDENNVGNRMLRSMGWHEGLGLGKDGSGMIEPVQAQAMDSRAGLGSQQKKVDPSLEVQAGDSYKTLIHKKALARFRE 3455 SE L + + Q YRDRAAERR YG +P PP R + S S +E T D + +N+G+RML++MGW EG GLG+ G++ P++AQ +GLG++ S V + +SYK +HK + RF E Sbjct: 718 LSENELEALEKNDMEQMKYRDRAAERREKYG------------------------------IPEPPEPKRRKYGGISTASVDFEQPTRD-GLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGAR----GSSYGVTSTESYKETLHKTMVTRFNE 850
BLAST of gene-KPL71_018827-mRNA1 vs. DB:SwissProt
Match: RBM10_MOUSE (RNA-binding protein 10 OS=Mus musculus OX=10090 GN=Rbm10 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.269e-12 Identity = 54/168 (32.14%), Postives = 77/168 (45.83%), Query Frame = 3 Query: 2958 FSEMPLPPATQKEQPQTTYRDRAAERRSLYGSSFSAGDDLPDVGSGDSNRDFALKKGSVDSMPFPPGVGGRGFTADSVQS--YEVITADKAIDENNVGNRMLRSMGWHEGLGLGKDGSGMIEPVQAQAMDSRAGLGSQQKKVDPSLEVQAGDSYKTLIHKKALARFRE 3455 SE L + + Q YRDRAAERR YG +P PP R + S S +E T D + +N+G+RML++MGW EG GLG+ G++ P++AQ +GLG++ S V + +SYK +HK + RF E Sbjct: 796 LSENELEALEKNDMEQMKYRDRAAERREKYG------------------------------IPEPPEPKRRKYGGISTASVDFEQPTRD-GLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPIEAQTRVRGSGLGAR----GSSYGVTSTESYKETLHKTMVTRFNE 928 The following BLAST results are available for this feature:
BLAST of gene-KPL71_018827-mRNA1 vs. DB:SwissProt
Analysis Date: 2023-04-17 (BLAST: C. sinensis DVS_B v1.0) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro: C. sinensis DVS_B v1.0
Date Performed: 2023-04-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >gene-KPL71_018827-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018827-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018827-mRNA1; organism=Citrus sinensis; type=mRNA; length=3727bpback to top protein sequence of gene-KPL71_018827-mRNA1_Citrus_sinensis_DVS_B_v1 >gene-KPL71_018827-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018827-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018827-mRNA1_Citrus_sinensis_DVS_B_v1; organism=Citrus sinensis; type=polypeptide; length=1079bpback to top mRNA from alignment at CM039175.1_Chr6_DVS_B:21172701..21180302- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=7602bp; location=Sequence derived from: CM039175.1_Chr6_DVS_B:21172701..21180302- (Citrus sinensisback to top Coding sequence (CDS) from alignment at CM039175.1_Chr6_DVS_B:21172701..21180302- >gene-KPL71_018827-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018827-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018827-mRNA1; organism=Citrus sinensis; type=CDS; length=3240bp; location=Sequence derived from: CM039175.1_Chr6_DVS_B:21172701..21180302- (Citrus sinensisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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