gene-KPL71_018989-mRNA1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of gene-KPL71_018989-mRNA1 vs. DB:SwissProt
Match: GGPPS_HEVBR (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=3981 GN=GGPS PE=1 SV=1) HSP 1 Score: 348.977 bits (894), Expect = 4.034e-108 Identity = 193/296 (65.20%), Postives = 241/296 (81.42%), Query Frame = 2 Query: 1571 PTFQFEEYMTSKSRKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGERTXXXXXXXXXXXXFEHVAAKTVGVSTDRVVRAITXXXXXXXXXXXXXXQVTDLDSEG-KDVSLSELEYIHVHKTAKLLEASXXXXXXXXXXXXXXXERVRNYARCIGLLFQVVDDILDVTKSSTVLGKTAGKDLLSDKATYPKLMGIENAKKFADELFSQATKELAYFEVSKAAPLYHLAKYIVSRQN 2455
P+F F+ YM K +++AL+ A+P+Q P KIHE+MRYSLLAGGKR+RP LC+A+CELVGG++S+ MP ACA+EM HTMSLIHDDLP +DNDDLRRGKPTNH VFGE A+LAGDALLA AFEH+A T+ VS+ R+VRA+ EL A+GAEGL+ GQV D++SEG +V L +LE+IH+HKTAKLLE +VV G I+GGG E+E++R YAR IGLLFQVVDDILDVTKSS LGKTAGKDL++DK TYPKL+GIE +++FA++L +A ++LA F+ KAAPL LA YI RQN
Sbjct: 75 PSFDFKSYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSMAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLNKEAQEQLAGFDPEKAAPLIALANYIAHRQN 370
BLAST of gene-KPL71_018989-mRNA1 vs. DB:SwissProt
Match: GGPP1_ARATH (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGPPS1 PE=1 SV=2) HSP 1 Score: 341.273 bits (874), Expect = 3.083e-105 Identity = 197/299 (65.89%), Postives = 236/299 (78.93%), Query Frame = 2 Query: 1574 TFQFEEYMTSKSRKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGERTXXXXXXXXXXXXFEHVAAKTVG--VSTDRVVRAITXXXXXXXXXXXXXXQVTDLDSEG---KDVSLSELEYIHVHKTAKLLEASXXXXXXXXXXXXXXXERVRNYARCIGLLFQVVDDILDVTKSSTVLGKTAGKDLLSDKATYPKLMGIENAKKFADELFSQATKELAYFEVSKAAPLYHLAKYIVSRQN 2455
+F F Y+ +K+ V+KALD A+P++ P KIHEAMRYSLLAGGKR+RPVLCIA+CELVGG+ES MP ACA+EM HTMSLIHDDLP +DNDDLRRGKPTNHKVFGE A+LAGDALL+ AFEH+A+ T VS RVVRA+ EL A+G EGL+ GQV D+ SEG DV L LE+IH+HKTA LLEAS V G I+GGG+ EIER+R +ARCIGLLFQVVDDILDVTKSS LGKTAGKDL++DK TYPK+MG+E +++FA++L +A +L F+ K APL LA YI RQN
Sbjct: 73 SFDFMSYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLASATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKTAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNREARDQLLGFDSDKVAPLLALANYIAYRQN 371
BLAST of gene-KPL71_018989-mRNA1 vs. DB:SwissProt
Match: GGPPS_SINAL (Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis alba OX=3728 GN=GGPS1 PE=1 SV=1) HSP 1 Score: 339.347 bits (869), Expect = 1.395e-104 Identity = 198/304 (65.13%), Postives = 240/304 (78.95%), Query Frame = 2 Query: 1556 VKIALPTFQFEEYMTSKSRKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGERTXXXXXXXXXXXXFEHVAAKTVG-VSTDRVVRAITXXXXXXXXXXXXXXQVTDLDSEGKD---VSLSELEYIHVHKTAKLLEASXXXXXXXXXXXXXXXERVRNYARCIGLLFQVVDDILDVTKSSTVLGKTAGKDLLSDKATYPKLMGIENAKKFADELFSQATKELAYFEVSKAAPLYHLAKYIVSRQN 2455
+K + +F F Y+ K+ V+KALD A+P++ P KIHEAMRYSLLAGGKR+RPVLCIA+CELVGG+ESL MP CA+EM HTMSLIHDDLP +DNDDLRRGKPTNHKV+GE A+LAGDALL+ AFEH+A+ T VS RVVRA+ EL A+G EGL+ GQV D+ SEG D V L L++IH+HKTA LLEAS V G IIGGG+ EIER+R +ARCIGLLFQVVDDILDVTKSS LGKTAGKDL++DK TYPKLMG+E +++FA++L ++A +L F+ K APL LA YI +RQN
Sbjct: 63 LKSSSSSFDFMSYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLAMPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHLHKTAALLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLIADKLTYPKLMGLEKSREFAEKLNTEARDQLLGFDSDKVAPLLALANYIANRQN 366
BLAST of gene-KPL71_018989-mRNA1 vs. DB:SwissProt
Match: GGPP7_ARATH (Geranylgeranyl pyrophosphate synthase 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g18620 PE=2 SV=1) HSP 1 Score: 335.495 bits (859), Expect = 1.830e-103 Identity = 193/296 (65.20%), Postives = 232/296 (78.38%), Query Frame = 2 Query: 1577 FQFEEYMTSKSRKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGERTXXXXXXXXXXXXFEHVAAKTVGVSTDRVVRAITXXXXXXXXXXXXXXQVTDLDSEG---KDVSLSELEYIHVHKTAKLLEASXXXXXXXXXXXXXXXERVRNYARCIGLLFQVVDDILDVTKSSTVLGKTAGKDLLSDKATYPKLMGIENAKKFADELFSQATKELAYFEVSKAAPLYHLAKYIVSRQN 2455
F F YM K+ V++ALD A+ ++ P KIHEA+RYSLLA GKR+RPVLCIA+CELVGG+ES+ +P ACA+EM HTMSLIHDDLP +DNDDLRRGKPTNHKVFGE A+LAGDAL++ AFEH+A T VS RVVRAI EL A+G++GL+ GQV DL S G DV L LE+IHVHKTA LLEA+ V G I+GGG+ E+E++R +ARCIGLLFQVVDDILDVTKSS LGKTAGKDL++DK TYPKLMG+E +K FAD+L S A ++L F+ S+ PL LA YI RQN
Sbjct: 53 FDFTSYMIGKANAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCIAACELVGGEESVALPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAFEHLATST-AVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLEFIHVHKTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYPKLMGLEKSKDFADKLLSDAHEQLHGFDSSRVKPLLALANYIAKRQN 347
BLAST of gene-KPL71_018989-mRNA1 vs. DB:SwissProt
Match: GGPPS_CATRO (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Catharanthus roseus OX=4058 GN=GGPS1 PE=3 SV=1) HSP 1 Score: 333.183 bits (853), Expect = 1.594e-102 Identity = 188/292 (64.38%), Postives = 234/292 (80.14%), Query Frame = 2 Query: 1583 FEEYMTSKSRKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGERTXXXXXXXXXXXXFEHVAAKTVGVSTDRVVRAITXXXXXXXXXXXXXXQVTDLDSEG-KDVSLSELEYIHVHKTAKLLEASXXXXXXXXXXXXXXXERVRNYARCIGLLFQVVDDILDVTKSSTVLGKTAGKDLLSDKATYPKLMGIENAKKFADELFSQATKELAYFEVSKAAPLYHLAKYIVSRQN 2455
F+ YM K+ V+KAL++A+ ++ P KIHE+MRYSLLAGGKR+RP+LCIA+CEL GG ES+ MP ACA+EM HTMSL+HDDLP +DNDDLRRGKPTNHKVFGE A+LAGDALLA AFEH+A T GVS++R+VR + EL +G+EGL+ GQV D+ SEG DV L LE+IH+HKTA LLE SVV G I+GG N +I ++R +ARCIGLLFQVVDDILDVTKSS LGKTAGKDL++DK TYPKL+GI+ +++FA++L +A ++LA F+ KAAPL LA YI R N
Sbjct: 66 FKAYMIGKANSVNKALEDAVLVREPLKIHESMRYSLLAGGKRVRPMLCIAACELFGGTESVAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIATATKGVSSERIVRVVGELAKCIGSEGLVAGQVVDVCSEGIADVGLEHLEFIHIHKTAALLEGSVVLGAIVGGANDEQISKLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIDKSREFAEKLNREAQEQLAEFDPEKAAPLIALANYIAYRDN 357
BLAST of gene-KPL71_018989-mRNA1 vs. DB:SwissProt
Match: GGPPS_CAPAN (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Capsicum annuum OX=4072 GN=GGPS1 PE=3 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 1.770e-101 Identity = 206/383 (53.79%), Postives = 260/383 (67.89%), Query Frame = 2 Query: 1331 LRSQNLVSMAFSATIPSCTHSALLKNSPLNY--FKMPFMIPFPNLKPFPMKN-----NACHAENLASVKPSQGAESIMNIKPVKIALPTFQFEEYMTSKSRKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGERTXXXXXXXXXXXXFEHVAAKTVGVSTDRVVRAITXXXXXXXXXXXXXXQVTDLDSEGK-DVSLSELEYIHVHKTAKLLEASXXXXXXXXXXXXXXXERVRNYARCIGLLFQVVDDILDVTKSSTVLGKTAGKDLLSDKATYPKLMGIENAKKFADELFSQATKELAYFEVSKAAPLYHLAKYIVSRQN 2455
+RS NLV + + L+ N L+Y F IP N K P N + +A+ K + E+ +P F F+ Y+T K+ V+KALDEA+ ++ P IHEAMRYSLLAGGKR+RP+LC+A+CELVGG++ M ACA+EM HTMSLIHDDLP +DNDDLRRGKPTNHK++GE A+LAGD+LLA AFEH+ T GV+ R+V A+ EL ++G EGL+ GQV D+ G VSL LE+IHVHKTA LLE+SVV G I+GGG +E+E++R +ARCIGLLFQVVDDILDVTKSS LGKTAGKDL+ DK TYPKL+G+E AK+FA EL +A ++L F+ KAAPL LA YI R N
Sbjct: 1 MRSMNLVDL-------WAQQACLVFNQTLSYKSFNGFMKIPLKNSKINPKLNKKRPFSPLTVSAIATTKEDERIEAAQTEEP-------FNFKIYVTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAGGKRVRPMLCLAACELVGGNQENAMAAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFAFEHIVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHVHKTAALLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVVDKTTYPKLLGLEKAKEFAAELNREAKQQLEGFDSRKAAPLIALADYIAYRDN 369
BLAST of gene-KPL71_018989-mRNA1 vs. DB:SwissProt
Match: GGPP4_ARATH (Geranylgeranyl pyrophosphate synthase 4 OS=Arabidopsis thaliana OX=3702 GN=GGPP4 PE=2 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 4.006e-92 Identity = 176/297 (59.26%), Postives = 223/297 (75.08%), Query Frame = 2 Query: 1574 TFQFEEYMTSKSRKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGERTXXXXXXXXXXXXFEHVAAKTVGVSTDRVVRAITXXXXXXXXXXXXXXQVTDLDSEG---KDVSLSELEYIHVHKTAKLLEASXXXXXXXXXXXXXXXERVRNYARCIGLLFQVVDDILDVTKSSTVLGKTAGKDLLSDKATYPKLMGIENAKKFADELFSQATKELAYFEVSKAAPLYHLAKYIVSRQN 2455
+F F+ YM SK+ +++ALDEA+P+ P IH+AMRY++LAGGKR+RP+LC+A+CELVGG+E L + ACA+EM HTMSLI DDLP +DNDDLRRGKPT HKVFGE AIL+G ALLALAFEH+ VS+ ++VRA+ EL ++G +GL+ GQ DL SEG DV L +LEYIHVHKT LLEAS V G +IGGG EIE+VRN+ARCIGLLFQVVDDILD TKSS LGKTAGKD ++ K TYPK++G+E +K+F ++L A + L F+ K PL L +I +R +
Sbjct: 78 SFDFKPYMISKAETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCLAACELVGGEERLAIQAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLT--EADVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLEASAVIGAVIGGGTEKEIEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVIGVEKSKEFVEKLKRDAREHLQGFDSDKVKPLIALTNFIANRNH 372
BLAST of gene-KPL71_018989-mRNA1 vs. DB:SwissProt
Match: GGPP2_ARATH (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 2 OS=Arabidopsis thaliana OX=3702 GN=GGPPS2 PE=1 SV=2) HSP 1 Score: 305.449 bits (781), Expect = 4.783e-92 Identity = 179/296 (60.47%), Postives = 219/296 (73.99%), Query Frame = 2 Query: 1574 TFQFEEYMTSKSRKVDKALDEALPMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGERTXXXXXXXXXXXXFEHVAAKTVGVSTDRVVRAITXXXXXXXXXXXXXXQVTDLDSEGKD---VSLSELEYIHVHKTAKLLEASXXXXXXXXXXXXXXXERVRNYARCIGLLFQVVDDILDVTKSSTVLGKTAGKDLLSDKATYPKLMGIENAKKFADELFSQATKELAYFEVSKAAPLYHLAKYIVSRQ 2452
TF+F+ YM SK+ V+KAL+EA+P+ P KIHEAMRY++LA GKR+RP+LC+ASCELVGG E+ MP ACA+EM HTMSLI DDLP +DNDDLRRGKPT HKV+GE AIL+G ALL+LAFEH+ T +S++R+V A+ EL ++G GL+ GQ D+ SEG D V L LE+IHVHKTA LLE + V G IIGGG+ EIE VR +ARCIGLLFQVVDDILD TKSS LGKTAGKD L+ K TYPKL+G+E +K+F L A + L F K APL L +I +R
Sbjct: 82 TFEFDPYMMSKAESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENAAMPAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMT--TAEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFIHVHKTAVLLETAAVLGAIIGGGSDEEIESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGKLTYPKLIGLEKSKEFVKRLTKDARQHLQGFSSEKVAPLVALTTFIANRN 375
BLAST of gene-KPL71_018989-mRNA1 vs. DB:SwissProt
Match: GGPP8_ARATH (Putative geranylgeranyl pyrophosphate synthase 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g14510 PE=5 SV=2) HSP 1 Score: 300.827 bits (769), Expect = 1.121e-90 Identity = 179/298 (60.07%), Postives = 227/298 (76.17%), Query Frame = 2 Query: 1577 FQFEEYMTSKSRKVDKALDEAL-PMQHPEKIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGERTXXXXXXXXXXXXFEHVAAKTVG-VSTDRVVRAITXXXXXXXXXXXXXXQVTDLDSEG---KDVSLSELEYIHVHKTAKLLEASXXXXXXXXXXXXXXXERVRNYARCIGLLFQVVDDILDVTKSSTVLGKTAGKDLLSDKATYPKLMGIENAKKFADELFSQATKELAYFEVSKAAPLYHLAKYIVSRQN 2455
F F+ YM K+ V+ ALD ++ P++ P + EA+RYSLLAGGKR+RP+LCIA CELVGGDE+ M ACA+EM HT SLIHDDLP +DN DLRRGKPTNHKVFGE A+LAGDALLALAFEH+ + G V+++R++RA+ EL A+G +GL+ GQV DL SE DV L LE+IH+HKTA LLEA+ V G I+GGG EIE++R YARCIGLLFQVVDDILDVTKS+ LGKTAGKD+++ K TYP+L+G+E +++ A++L +A ++L FE KAAPL LA YI R +
Sbjct: 64 FDFKLYMIRKAESVNAALDVSIVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRAVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSREVAEKLSREAEEQLLGFESDKAAPLVALASYISCRND 361
BLAST of gene-KPL71_018989-mRNA1 vs. DB:SwissProt
Match: GGPPA_ARATH (Geranylgeranyl pyrophosphate synthase 10, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g20160 PE=1 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 7.023e-88 Identity = 171/299 (57.19%), Postives = 218/299 (72.91%), Query Frame = 2 Query: 1577 FQFEEYMTSKSRKVDKALDEALPMQHPE-KIHEAMRYSLLAGGKRIRPVLCIASCELVGGDESLVMPMACALEMTHTMSLIHDDLPALDNDDLRRGKPTNHKVFGERTXXXXXXXXXXXXFEHVAAKTVG-VSTDRVVRAITXXXXXXXXXXXXXXQVTDLDSEG----KDVSLSELEYIHVHKTAKLLEASXXXXXXXXXXXXXXXERVRNYARCIGLLFQVVDDILDVTKSSTVLGKTAGKDLLSDKATYPKLMGIENAKKFADELFSQATKELAYFEVSKAAPLYHLAKYIVSRQN 2455
F+F YM +K++ V+KAL+EA+P++ PE KI EAMRY+LL+ GKR+RP+LC+A+CELVGG ES M ACA+EM H SLI DDLP +DND LRRGKPTNH VFGE AILA AL+ALA + + T V +R+++ T EGL+ GQ DL EG D L LE+IH+HKTA LLEA+ V G I+GGG+ EIER+R+YARCIGL+FQVVDD+LDVTKSS LGKTAGKDL++ K TYP+LMG+E +K++A+ L +A + L F++ K APL LA YIV+RQN
Sbjct: 48 FKFMSYMVNKAKSVNKALEEAVPLREPELKIREAMRYTLLSDGKRVRPMLCLAACELVGGQESTAMSAACAIEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALAVQKTTSSTFADVPPERILK--TVQEMVKAVEGLVAGQQADLAGEGMRFDSDTGLEHLEFIHIHKTAALLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLIAGKLTYPRLMGVEKSKEYAERLNIEAREHLLGFDIDKVAPLVSLADYIVNRQN 344 The following BLAST results are available for this feature:
BLAST of gene-KPL71_018989-mRNA1 vs. DB:SwissProt
Analysis Date: 2023-04-17 (BLAST: C. sinensis DVS_B v1.0) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro: C. sinensis DVS_B v1.0
Date Performed: 2023-04-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >gene-KPL71_018989-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018989-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018989-mRNA1; organism=Citrus sinensis; type=mRNA; length=3880bpback to top protein sequence of gene-KPL71_018989-mRNA1_Citrus_sinensis_DVS_B_v1 >gene-KPL71_018989-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018989-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018989-mRNA1_Citrus_sinensis_DVS_B_v1; organism=Citrus sinensis; type=polypeptide; length=328bpback to top mRNA from alignment at CM039175.1_Chr6_DVS_B:22245837..22249716- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=3880bp; location=Sequence derived from: CM039175.1_Chr6_DVS_B:22245837..22249716- (Citrus sinensisback to top Coding sequence (CDS) from alignment at CM039175.1_Chr6_DVS_B:22245837..22249716- >gene-KPL71_018989-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018989-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018989-mRNA1; organism=Citrus sinensis; type=CDS; length=987bp; location=Sequence derived from: CM039175.1_Chr6_DVS_B:22245837..22249716- (Citrus sinensisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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