gene-KPL71_019125-mRNA1 | Citrus Genome Database

Transcript Overview


Name	gene-KPL71_019125-mRNA1
Unique Name	gene-KPL71_019125-mRNA1_Citrus_sinensis_DVS_B_v1
Type	mRNA
Organism	Citrus sinensis (Sweet orange)
Sequence length	4362
Product	DDT domain-containing protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Citrus sinensis cv. Valencia DVS_B genome v1.0	2023-04-13
BLAST: C. sinensis DVS_B v1.0	2023-04-17
InterPro: C. sinensis DVS_B v1.0	2023-04-17

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
ccdvbL100	Citrus clementina genome v1.0 (JGI)	Citrus clementina
csndvbL314	Citrus sinensis cv. Newhall v1.0 genome	Citrus sinensis
csndvbL337	Citrus sinensis cv. Newhall v1.0 genome	Citrus sinensis
csgdvbL056	Citrus sinensis cv. Gannanzao v1.0 genome	Citrus sinensis
cmmdvbL321	Citrus mangshanensis cv. MSYG genome v1.0	Citrus mangshanensis
csjdvbL252	Citrus sinensis cv. Jinhong genome v1.0	Citrus sinensis
crcdvbL318	Citrus reticulata 'Chachi' cv. Dazhongyoushen genome v1.0	Citrus reticulata
cstdvbL221	Citrus sinensis cv. Newhall T2T v2.0 genome	Citrus sinensis
crmdvbL405	Citrus reticulata cv. Murcott genome v1.0	Citrus reticulata
cridvbL420	Citrus reticulata cv. IRM2 genome v1.0	Citrus reticulata

Orthologs


Gene/Transcript	Assembly	Species
Ciclev10013338m	Citrus clementina genome v1.0 (JGI)	Citrus clementina
Cms109030.1	Citrus mangshanensis cv. MSYG genome v1.0	Citrus mangshanensis
g19877.t2_h1	Citrus reticulata cv. IRM2 genome v1.0	Citrus reticulata
CP6g000392.t1	Citrus reticulata 'Chachi' cv. Dazhongyoushen genome v1.0	Citrus reticulata
g17633.t1_h1	Citrus reticulata cv. Murcott genome v1.0	Citrus reticulata

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
CsN06G003410.1	Citrus sinensis cv. Newhall T2T v2.0 genome	Citrus sinensis
EVM_prediction_chr3.1_tiancheng.2004	Citrus sinensis cv. Newhall v1.0 genome	Citrus sinensis
EVM_prediction_HIC_ASM_8.323	Citrus sinensis cv. Gannanzao v1.0 genome	Citrus sinensis
drCitSine.Jinhong.1.0.HB6g04030.1	Citrus sinensis cv. Jinhong genome v1.0	Citrus sinensis
EVM_prediction_chr3.2_youzi.2051	Citrus sinensis cv. Newhall v1.0 genome	Citrus sinensis

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-KPL71_019125	gene-KPL71_019125_Citrus_sinensis_DVS_B_v1	Citrus sinensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-exon1	rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-exon1_Citrus_sinensis_DVS_B_v1	Citrus sinensis	exon
rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-exon2	rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-exon2_Citrus_sinensis_DVS_B_v1	Citrus sinensis	exon
rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-exon3	rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-exon3_Citrus_sinensis_DVS_B_v1	Citrus sinensis	exon
rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-exon4	rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-exon4_Citrus_sinensis_DVS_B_v1	Citrus sinensis	exon
rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-exon5	rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-exon5_Citrus_sinensis_DVS_B_v1	Citrus sinensis	exon
rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-exon6	rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-exon6_Citrus_sinensis_DVS_B_v1	Citrus sinensis	exon
rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-exon7	rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-exon7_Citrus_sinensis_DVS_B_v1	Citrus sinensis	exon
rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-exon8	rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-exon8_Citrus_sinensis_DVS_B_v1	Citrus sinensis	exon
rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-exon9	rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-exon9_Citrus_sinensis_DVS_B_v1	Citrus sinensis	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-CDS1	rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-CDS1_Citrus_sinensis_DVS_B_v1	Citrus sinensis	CDS
rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-CDS2	rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-CDS2_Citrus_sinensis_DVS_B_v1	Citrus sinensis	CDS
rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-CDS3	rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-CDS3_Citrus_sinensis_DVS_B_v1	Citrus sinensis	CDS
rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-CDS4	rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-CDS4_Citrus_sinensis_DVS_B_v1	Citrus sinensis	CDS
rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-CDS5	rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-CDS5_Citrus_sinensis_DVS_B_v1	Citrus sinensis	CDS
rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-CDS6	rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-CDS6_Citrus_sinensis_DVS_B_v1	Citrus sinensis	CDS
rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-CDS7	rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-CDS7_Citrus_sinensis_DVS_B_v1	Citrus sinensis	CDS
rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-CDS8	rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-CDS8_Citrus_sinensis_DVS_B_v1	Citrus sinensis	CDS
rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-CDS9	rna-gnl\|WGS:JAHMIT\|DVS6B02022.t04-CDS9_Citrus_sinensis_DVS_B_v1	Citrus sinensis	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
gene-KPL71_019125-mRNA1_Citrus_sinensis_DVS_B_v1	gene-KPL71_019125-mRNA1_Citrus_sinensis_DVS_B_v1	Citrus sinensis	polypeptide
gene-KPL71_019125-mRNA1_Citrus_sinensis_DVS_B_v1	gene-KPL71_019125-mRNA1_Citrus_sinensis_DVS_B_v1-protein	Citrus sinensis	polypeptide

Homology

The following BLAST results are available for this feature:

BLAST of gene-KPL71_019125-mRNA1 vs.

BLAST of gene-KPL71_019125-mRNA1 vs.
Analysis Date: 2023-04-17 (BLAST: C. sinensis DVS_B v1.0)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro: C. sinensis DVS_B v1.0
Date Performed: 2023-04-17

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..91
IPR040221	CDCA7/CDA7L	PANTHER	PTHR31169	OS05G0300700 PROTEIN	coord: 115..434
IPR018501	DDT domain	PROSITE	PS50827	DDT	coord: 208..273 score: 11.201519

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at CM039175.1_Chr6_DVS_B:23104476..23111474+
coding sequence from alignment at CM039175.1_Chr6_DVS_B:23104476..23111474+

mRNA sequence

>gene-KPL71_019125-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_019125-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_019125-mRNA1; organism=Citrus sinensis; type=mRNA; length=4362bp
GACAACTTGAAGTAAGTATCCTTCCAAcaaatatttctataaataattta
aattattaaatattatttatgtgaGATACACGTAtacagattttttttaa
tatgactTCTATGAAATCATTAAGCATAGattgattttatataaataatt
tattaaatttatataatatcaCACGTCGTTTATATGTTCATACTAGAAAT
CATTTATGTCCTAAAAGTGTAAATGACAAATCATACgtatatcatttaaa
atttctgacaattcatcttttttttttaagttataaacggttagaataaa
aattttgcaaCATGTCATCTATTTTCTGAAACAATAAATGGCATGTCATA
CATTTTCTGTAAAATTGTACGAGATGCCATTTATATgttgaaattataaa
tgataagtCATATACTTTTTACACCAGAGAAAGTCTTCAAACATGTCTTC
ATCTATGTCATGAATATATAAATGACAAGTTGCAACGTTACATAATGTTT
CTTACTTTAGAaggcttcaatttatttctatttttattaagaagacaaaa
aaaatttcatcaactcaactttatatttttcttatctttggaACAAAAAT
GAGATAATTTGATATTACTAAATGTAAGAGTGTAATTTAAATATAGTCAA
TTCATAATAGggtaattttagatttttgtcTTCCGAAGTTGTAAACAACA
TGttatacataaattttaaataaaaaattttatttgtgacaactattata
aagtaaataattttaaatatatgataattattaaattaatgtttatacat
ttatttatttatagtaaatttaattagttaagtTGAATTCTGTAGTGGCG
TACAAGACATGCACGCcctaattgtaaatatcttttttttttcgtttgta
aatatcaatacttaaaaaagaaaaaaaaaaacgtaatTGGccattttaag
ttttatagtTCGACTTTACTCTTTGATCAAAATATGGTCAAATACAAGGg
tttcaaagataaaaaataaaaaataaaaaaatcgatCTGTCTGGATTGTG
GGAGATCCGtgataaatttacaaaaataaaaatattcgtTTGGCGGTCCA
CAATCCCTCCCATTCGCACATTagattttctctcaaatttctCCCGCCAT
TTCAACTCAAAGAAGAGGGAAACTTTGGAAATGATTCAAAATAAGGTCCA
AGTGAAAATTTAGGCAAATACGTTCGTCGTCTGAAGAAGCGAAGCAGAGC
AGTGTTGCCAAAAAGTGAAAAACACTTTCAGAAAACAGTTTTGAGAAAAT
GGCTGTAGCTTCAAGCTCTGTTTCCAAAGACAAAGCCGCTGCTGCCAAGA
AGGAGAAACAGAAAGAACCTAAGAGAACTAATTGCCCAGGGGTTCGTCTT
CACCATGGCAGAATCTACGATTCTGAGAATGGAAAAACATGTCACCagGA
GTCTGAAGCTGCTTTGTCGAGGAAACCAGGAaaggaaaattcttttgaca
GAGACTGTGattcaaatttgaattctCGGAATTTATCACAAACCTTGAAT
AAAGAGAAATCAAAGAAGATGAAATGGGAAGGATTAAAGGAAATCCCCAG
TATCAATGGGGACGATGGTGTCTCTTTGAGGATGAAGAGCCCAAAAAAGC
CGAGGGTTTCTGAAGAAATTTCTGAGAAAGAGAAGTTTAAAGTTTCGGAG
GAGGTTTCTAGGATTGACAAGCCAAAGGAAGAAGGGGAGAAAAATGAAGA
TGGTCTTGGGAATCTTGGGGGCGTAAAAGCTCTAAATTGTGTTAAAAATG
CTGGTGTTGGATCCAATTTAGAGGCAGTTTCTGAATCTCGCGGTGTTAAC
AAGTGTATCACAGAAGTTCCATTGCCTCGGAGTGCCACTTTAACAACTGT
AGCTGGAGCTGAGATACCTCCCGAAGATGTTGGACATGCATTGCAGTTCT
TAGAATTTTGTGCAGCTTTTGGAAAGGTTCTGGATTTGAAGAAAGGACAA
GCTGAATGTATTATTAGAGAATTGATGGGTGGGCGGAGTAGGCGCCGAGG
GCTAGGCTTTCCAATGGTCCAAATTCATATCCAATTGCTGTCTTTGGTCC
AAAAGGATATGGGAGAAGAGTCTCCATTGAGTTCAACAAGTGGAAAACAT
TCATGGTTGCAGGCTCTTAGCAAATGTGTCTCTAATTCCAAATGTCCATT
GAATGATATACCTTCTAACTGTTTTGATTGTGGAGGTGATGGATATCATC
AGTTAGATGGGTCAAAAAAGCTTAAgctgttgaattttttatgtgaTGAA
GCTCTAGGCACCACAGCGCTGAGGAATTGGATTGATGATCAAAATTCAGA
ATTTGTTGAAAAAGTGAAGGaatcaagagaaaaatttgttgcagcaaaag
aaaaggaaaaaaaattgaagcaaaAATTGCAAGATGAGGTGGCCAAAGCA
ATTATCACTAATGGTGCTCCCTTGTCAATTTCTGAGCATGAAGCTATTGT
TTCAGAGATAAAAAGGAAAGCAGCTGAAGCACATTCTGAGATGACAGAGG
CAAAAGGCATGGCTTTCAAGAAGAAACAACGATCTGATGCTGTTAGAACG
GAGCCTATTATAAAGGAAGACAATGGCTGTGCCTTTTGGAGATTGAAGGG
CTGTAATGGTGGACGGGCTATTTTGGTTCAAGAGGTGAATGGAACCCCAG
ATGCAGTTTCACCCAGCGAAAAATGGTTTGCCTATGATGCTGATCAGGTA
CCAGCAGTTGAGAAATATCTCTCTTCAAAAAGATCCGGTGTCCGGAGCAA
TTGTGATCTTgcattttggttttgattaAACAGCTCAGCAAGGAAATCTT
GCATCCTCGCAGGTACAGAGAACTGGCTAGGAATGAGTAAAAGCTTGTAC
AGTAACAGAATtggtattaaaattttgtattttggaTCCAAATTTTATGT
GTTTGGGTTCATTCTAAAGATTAATATCGTTTACATGTGCTGATTTGTAT
GATTCAGTTAATATGGGTTAGCGGATTTTCGATCTAGCTGCTGAGATTGT
TGTATGTACTAATACATTATGGTTCTTGATGAACAATTCAATAGGCATTG
TGATATGCAGTTTTTGCTTGGTAATGACTTTAGGGACATGTTTAATGCGA
ATTGACTgattatattcttatttaacGAAACTTAAAACTATAAGGTTATG
TTTGGCATGCTcatttggattgaattaatGGTAATGgactaaattcaaat
tttaatgctaaatttatgaaatagcTAATCCTAATTTTCATGTGAGTTAA
GTTAAGATAAGAATCACCAAAAATAATGACAAGAAAAGTTTTTATCCATT
TATAATATCTTCCATAATTTATtacaccattttatttataacttaaaatt
tatttattgtttttaattaagtaatttattttttattcatgatttactaa
aaagttattaattaatttattatttgaataatttattattttatttaatg
aaatgatatatttgtggtatatataaaacatattaatGTTAGCctctaat
aataacaacatttGAGGGGTAATTATAATGTTTGGAATGATAAAATTCGA
TAGTTGGAAAAACATTACCCTCATTTTAGTATGTAGAGATTTAAGTCCCT
TTTATGTGTATCATGAGATACTGAGATTGATATCTTAtgaatatttagaa
aaaaatcgGTTTCATTATATGTTTAGATATTTACATTGTAATGCAATTAA
AGACgataaaattcttttgatagTTTCTTAAGCAAAATATCATTAcattt
ataacataataataaaaatagcttaattaatatataatttattttaattt
attatatttaaatattattctcACTAGTACATAagttatgtttttttaaa
gcaaaatatcatttaatttataacataatattaataaaataatattatta
tatttttaaatatagtagtctaattaattttatttaattatattttttca
ttagtacataagttaaatatattaactatattttccatgaattaaaaaaa
aagaagtattttatttttttaaagttgagGGGGTCTTTgatagtttaata
attttgaattgattttctttatatttaccTCAAATGAGGGATCTGCATGA
TAGTTACCTTTTAATTTTGGCCTCTTTAACCAATTAAAACGATAGTACCG
GCGGCCGGTTATGtactgaattaaaaaaataataaaaagcagCAACGGTG
GAAGGGCAAAATTGGTAATTGGGAGTCGGAAACTCGGAATCCAAATCCGA
CTCGAAATCCGTATGCAAGCGGTAGACTCCAAATCCACATAATATAAAAG
GCCTGGAAACCC

protein sequence of gene-KPL71_019125-mRNA1_Citrus_sinensis_DVS_B_v1

>gene-KPL71_019125-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_019125-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_019125-mRNA1_Citrus_sinensis_DVS_B_v1; organism=Citrus sinensis; type=polypeptide; length=508bp
MAVASSSVSKDKAAAAKKEKQKEPKRTNCPGVRLHHGRIYDSENGKTCHQ
ESEAALSRKPGKENSFDRDCDSNLNSRNLSQTLNKEKSKKMKWEGLKEIP
SINGDDGVSLRMKSPKKPRVSEEISEKEKFKVSEEVSRIDKPKEEGEKNE
DGLGNLGGVKALNCVKNAGVGSNLEAVSESRGVNKCITEVPLPRSATLTT
VAGAEIPPEDVGHALQFLEFCAAFGKVLDLKKGQAECIIRELMGGRSRRR
GLGFPMVQIHIQLLSLVQKDMGEESPLSSTSGKHSWLQALSKCVSNSKCP
LNDIPSNCFDCGGDGYHQLDGSKKLKLLNFLCDEALGTTALRNWIDDQNS
EFVEKVKESREKFVAAKEKEKKLKQKLQDEVAKAIITNGAPLSISEHEAI
VSEIKRKAAEAHSEMTEAKGMAFKKKQRSDAVRTEPIIKEDNGCAFWRLK
GCNGGRAILVQEVNGTPDAVSPSEKWFAYDADQVPAVEKYLSSKRSGVRS
NCDLAFWF

mRNA from alignment at CM039175.1_Chr6_DVS_B:23104476..23111474+

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

> ID=; Name=; organism= ; type=; length=6999bp; location=Sequence derived from: CM039175.1_Chr6_DVS_B:23104476..23111474+ (Citrus sinensis
GACAACTTGAAGTAAGTATCCTTCCAAcaaatatttctataaataattta
aattattaaatattatttatgtgaGATACACGTAtacagattttttttaa
tatgactTCTATGAAATCATTAAGCATAGattgattttatataaataatt
tattaaatttatataatatcaCACGTCGTTTATATGTTCATACTAGAAAT
CATTTATGTCCTAAAAGTGTAAATGACAAATCATACgtatatcatttaaa
atttctgacaattcatcttttttttttaagttataaacggttagaataaa
aattttgcaaCATGTCATCTATTTTCTGAAACAATAAATGGCATGTCATA
CATTTTCTGTAAAATTGTACGAGATGCCATTTATATgttgaaattataaa
tgataagtCATATACTTTTTACACCAGAGAAAGTCTTCAAACATGTCTTC
ATCTATGTCATGAATATATAAATGACAAGTTGCAACGTTACATAATGTTT
CTTACTTTAGAaggcttcaatttatttctatttttattaagaagacaaaa
aaaatttcatcaactcaactttatatttttcttatctttggaACAAAAAT
GAGATAATTTGATATTACTAAATGTAAGAGTGTAATTTAAATATAGTCAA
TTCATAATAGggtaattttagatttttgtcTTCCGAAGTTGTAAACAACA
TGttatacataaattttaaataaaaaattttatttgtgacaactattata
aagtaaataattttaaatatatgataattattaaattaatgtttatacat
ttatttatttatagtaaatttaattagttaagtTGAATTCTGTAGTGGCG
TACAAGACATGCACGCcctaattgtaaatatcttttttttttcgtttgta
aatatcaatacttaaaaaagaaaaaaaaaaacgtaatTGGccattttaag
ttttatagtTCGACTTTACTCTTTGATCAAAATATGGTCAAATACAAGGg
tttcaaagataaaaaataaaaaataaaaaaatcgatCTGTCTGGATTGTG
GGAGATCCGtgataaatttacaaaaataaaaatattcgtTTGGCGGTCCA
CAATCCCTCCCATTCGCACATTagattttctctcaaatttctCCCGCCAT
TTCAACTCAAAGAAGAGGGAAACTTTGGAAATGATTCAAAATAAGGTCCA
AGTGAAAATTTAGGCAAATACGTTCGTCGTCTGAAGAAGCGAAGCAGAGC
AGTGTTGCCAAAAAGTGAAAAACACTTTCAGAAAACAGTTTTGAGAAAAT
GGCTGTAGCTTCAAGCTCTGTTTCCAAAGACAAAGCCGCTGCTGCCAAGA
AGGAGAAACAGAAAGAACCTAAGAGAACTAATTGCCCAGGGGTTCGTCTT
CACCATGGCAGAATCTACGATTCTGAGAATGGAAAAACATGTCACCaggt
ttgtttgtttcttcttcataATTGAGATTGAGTTAGTTTGTTTTAAGTGC
TGTTCGTTGGTGGGGAAATGTGGGAAAATGAAAGTATAGCATTTCTGAGC
TCTGTTTCCGGTTCCGTTTGATTGATGAGAAAGCATGGCTCTAACAAAGT
GGATATTTTAGTGGTagtcctcttttttttttttctttttccaatgcTTC
AAGTAATTACCCACTTTTCAATCTCTTTTTCTGTTTGGTTAGTGAGAAAG
CGtgggaaaatgaaagaaagtgATAGATAAAAATCCATTAATAAATGGGC
TCATTAATAAAGTTAGTTTGTTATGTTTGGAGAGTAATTGTGATGGGCTC
GTGcaatttttggctttttgcCATATGGCTATGGTTTTACTtaattgctt
ttctttttttcttgtgaattattgttattataattatttttttctatata
tgtTGGTTGTTATGAATCTTtggattaaatatttaaggaaGATCCATGGT
AATTGTTTAGGAAAGAATTGAAGTGGAATGCTGAATGTTGTTTTACcagt
attttcttttgattgatttttggTGGTATTCATTGTGTCTAATTTAATGT
TGAAGTGCCGGCAAAAAACAATGGACTTTGTGGCAGCTTGTAAGATTATG
AAAAAGGATAAATATTGCCCAATCAAGTTCTGTCACAAGTGCCTATTAAA
CAGGTTAGATTTGGTGTTGTGATCTTTTACACTTTCTTTTGAATTGAAta
caattaagttaattagcaTGCATTTTTATGAAAATGCTTCGTTggctaat
acaaaattttgtttgatgcTGAATTAGATACGGAGAGAAAGCAGAGGATG
CAGCTCTGTTGGATGGTTGGAATTGCCCCAGGTGTAGAGGCATCTGCAAT
TGTAGCTTATGCATGTAAGTGTGCAATAGCATAGTTGTTCTGGTTAGGGT
TGATGTTGATTGGTATTgctagtgattgagcaggtcTAACAGAATAACAT
GGTTTTAGGAAGAAAAGAGGTCACCAACCCACCGGTCAACTAGTGCAAGC
AGCCAAAGCAACTGGGTTTTCATCAGTTTCTGAAATGCTTCTAATTAAAG
GATACGACAATTTGGACCAAGAGAAGAAGATTGCTAAAGATGTGGCAGCT
TTACCGAAAAAGTCGCTTACTTTGAAAAAGGCAATTAAATGCACTTGTTA
TTTTGGTAGCTTTATTAATTGCAGCAAATCTCGGTTTTTAGGGTTTCTGG
AACATGCTCAGATATAAGTTCATGCTTTTGACAGGAGTCTGAAGCTGCTT
TGTCGAGGAAACCAGGAaaggaaaattcttttgacaGAGACTGTGattca
aatttgaattctCGGAATTTATCACAAACCTTGAATAAAGAGAAATCAAA
GAAGATGAAATGGGAAGGATTAAAGGAAATCCCCAGTATCAATGGGGACG
ATGGTGTCTCTTTGAGGATGAAGAGCCCAAAAAAGCCGAGGGTTTCTGAA
GAAATTTCTGAGAAAGAGAAGTTTAAAGTTTCGGAGGAGGTTTCTAGGAT
TGACAAGCCAAAGGAAGAAGGGGAGAAAAATGAAGATGGTCTTGGGAATC
TTGGGGGCGTAAAAGCTCTAAATTGTGTTAAAAATGCTGGTGTTGGATCC
AATTTAGAGGCAGTTTCTGAATCTCGCGGTGTTAACAAGTGTATCACAGA
AGTTCCATTGCCTCGGAGTGCCACTTTAACAACTGTAGCTGGAGCTGAGA
TACCTCCCGAAGATGTTGGACATGCATTGCAGTTCTTAGAATTTTGTGCA
GCTTTTGGAAAGGTATGTTTAAATGGGGATTTTTAAGGGGGAAAAAGTGG
TGTAATACTTGTTTGTTCTTATGATAATAATGGTAGTCAAGGATAATTCA
ACTTTAGCTTAAGTTTGATGTTTGGTAGTTATAAGAATAATAACCTCTTA
ATACGTGATTACTAACATCAGGTATTTGTTGATATCATGCTTCTAGAATC
ATTTCAATTAATGGTGTATTCCTTCAAAATGCCATAAAATAAACTTTCCA
TATCCTTCAATTTACTGTTGATTTAATGGAGCTATTGATGTTTGTAAATG
CTTCTGAAACCAAATTGTTCgctaataattttcattttaaaccAAGCCAA
GCATTCTCTAATTTggcatttttttccttctcatGCTCGTAATGCATTAG
GTTCTGGATTTGAAGAAAGGACAAGCTGAATGTATTATTAGAGAATTGAT
GGGTGGGCGGAGTAGGCGCCGAGGGCTAGGCTTTCCAATGGTCCAAATTC
ATATCCAATTGCTGTCTTTGGTCCAAAAGGATATGGGAGAAGAGTACTAA
TCAATTCCCTAGTAAATTTAGTGTGCTCTTGATTGCTTTTTGTTGAATAG
GATTGTATAGTAACTATTGAATTGTACAGTAACTATCTGTGTTTTTACTG
TTTAGGTCTCCATTGAGTTCAACAAGTGGAAAACATTCATGGTTGCAGGC
TCTTAGCAAATGTGTCTCTAATTCCAAATGTCCATTGAATGATATACCTT
CTAACTGTTTTGATTGTGGAGGTGATGGATATCATCAGTTAGATGGGTCA
AAAAAGCTTAAgctgttgaattttttatgtgaTGAAGCTCTAGGCACCAC
GTAAGTAAGCAAACACATAATGCCAACATTTTGATTTCATCTCcagaatt
tttctttcttcagtGTATGATACATCGCTTtgaattcttttaaattaaat
tcatttcagAGCGCTGAGGAATTGGATTGATGATCAAAATTCAGAATTTG
TTGAAAAAGTGAAGGaatcaagagaaaaatttgttgcagcaaaagaaaag
gtaacatgaggaaattaatattttggtaaAGAAGTAACGCCTGTTATTGC
AGTGAGTTGGGTGTAAAAAAGATTTGTTAGtgcaggaaaaaaaattgaag
caaaAATTGCAAGATGAGGTGGCCAAAGCAATTATCACTAATGGTGCTCC
CTTGTCAATTTCTGAGCATGAAGCTATTGTTTCAGAGATAAAAAGGAAAG
CAGCTGAAGCACATTCTGAGATGACAGAGGCAAAAGGCATGGCTTTCAAG
AGTAAGTTGAGGATTTCTGGTTTTAGTTCTTTTAAAATCTCATAAACTGT
ATCTGGATACTTGTtctatttacttttattattataaagactGCACGTGG
TGAAGTGGtttcatttatgttttcttgAATTGAATCATGGTTTATTTCTC
CTAGAAGCTGTTATTTCCAGTTACCAATTAGTGGTGTCAAAGATGGTAAT
TCCAATGTAGAGAAAGATTCATGTCTGTGTTTATATTGTAGAGAAACAAC
GATCTGATGCTGTTAGAACGGAGCCTATTATAAAGGAAGACAATGGCTGT
GCCTTTTGGAGATTGAAGGGCTGTAATGGTGGACGGGCTATTTTGGTTCA
AGGTCAGTTTAGATTAATATTGGACTTGTATGGATGATTGAGTATATGAA
TAGGTtatgcatatatatttaaaatccTTCAATGACCAGAGGTGAATGGA
ACCCCAGATGCAGTTTCACCCAGCGAAAAATGGTTTGCCTATGATGCTGA
TCAGGTACCAGCAGTTGAGAAATATCTCTCTTCAAAAAGGTTAGTACATT
GTTAGTTATATGCTAAATGGAAAACTGAtttgttggtttttttttaaaaa
aaaaatattatatcagTCCAATTCATCGGGAAGTATTCAATGCAGCTACA
TATTTGGCTTTTGTTTATTCAGTGATCTACTTACATTATGCAAGAATGAA
GGATTATAACTTGTGCTGTTCTTGTTTAGTTAATATGTTTTATCACTCTG
ATCTTCTTTCCCTTTGCAGGGAAAAAATGCTATGagtgaaaggaaaaaaa
aaacgtactCACATGCAATTGCTAGCTTTGAGCCAGACTTATAGATGCTT
CTAATATTTGATTTGTCAGATCCGGTGTCCGGAGCAATTGTGATCTTgca
ttttggttttgattaAACAGCTCAGCAAGGAAATCTTGCATCCTCGCAGG
TACAGAGAACTGGCTAGGAATGAGTAAAAGCTTGTACAGTAACAGAATtg
gtattaaaattttgtattttggaTCCAAATTTTATGTGTTTGGGTTCATT
CTAAAGATTAATATCGTTTACATGTGCTGATTTGTATGATTCAGTTAATA
TGGGTTAGCGGATTTTCGATCTAGCTGCTGAGATTGTTGTATGTACTAAT
ACATTATGGTTCTTGATGAACAATTCAATAGGCATTGTGATATGCAGTTT
TTGCTTGGTAATGACTTTAGGGACATGTTTAATGCGAATTGACTgattat
attcttatttaacGAAACTTAAAACTATAAGGTTATGTTTGGCATGCTca
tttggattgaattaatGGTAATGgactaaattcaaattttaatgctaaat
ttatgaaatagcTAATCCTAATTTTCATGTGAGTTAAGTTAAGATAAGAA
TCACCAAAAATAATGACAAGAAAAGTTTTTATCCATTTATAATATCTTCC
ATAATTTATtacaccattttatttataacttaaaatttatttattgtttt
taattaagtaatttattttttattcatgatttactaaaaagttattaatt
aatttattatttgaataatttattattttatttaatgaaatgatatattt
gtggtatatataaaacatattaatGTTAGCctctaataataacaacattt
GAGGGGTAATTATAATGTTTGGAATGATAAAATTCGATAGTTGGAAAAAC
ATTACCCTCATTTTAGTATGTAGAGATTTAAGTCCCTTTTATGTGTATCA
TGAGATACTGAGATTGATATCTTAtgaatatttagaaaaaaatcgGTTTC
ATTATATGTTTAGATATTTACATTGTAATGCAATTAAAGACgataaaatt
cttttgatagTTTCTTAAGCAAAATATCATTAcatttataacataataat
aaaaatagcttaattaatatataatttattttaatttattatatttaaat
attattctcACTAGTACATAagttatgtttttttaaagcaaaatatcatt
taatttataacataatattaataaaataatattattatatttttaaatat
agtagtctaattaattttatttaattatattttttcattagtacataagt
taaatatattaactatattttccatgaattaaaaaaaaagaagtatttta
tttttttaaagttgagGGGGTCTTTgatagtttaataattttgaattgat
tttctttatatttaccTCAAATGAGGGATCTGCATGATAGTTACCTTTTA
ATTTTGGCCTCTTTAACCAATTAAAACGATAGTACCGGCGGCCGGTTATG
tactgaattaaaaaaataataaaaagcagCAACGGTGGAAGGGCAAAATT
GGTAATTGGGAGTCGGAAACTCGGAATCCAAATCCGACTCGAAATCCGTA
TGCAAGCGGTAGACTCCAAATCCACATAATATAAAAGGCCTGGAAACCC

Coding sequence (CDS) from alignment at CM039175.1_Chr6_DVS_B:23104476..23111474+

>gene-KPL71_019125-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_019125-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_019125-mRNA1; organism=Citrus sinensis; type=CDS; length=1527bp; location=Sequence derived from: CM039175.1_Chr6_DVS_B:23104476..23111474+ (Citrus sinensis
ATGGCTGTAGCTTCAAGCTCTGTTTCCAAAGACAAAGCCGCTGCTGCCAA
GAAGGAGAAACAGAAAGAACCTAAGAGAACTAATTGCCCAGGGGTTCGTC
TTCACCATGGCAGAATCTACGATTCTGAGAATGGAAAAACATGTCACCag
GAGTCTGAAGCTGCTTTGTCGAGGAAACCAGGAaaggaaaattcttttga
caGAGACTGTGattcaaatttgaattctCGGAATTTATCACAAACCTTGA
ATAAAGAGAAATCAAAGAAGATGAAATGGGAAGGATTAAAGGAAATCCCC
AGTATCAATGGGGACGATGGTGTCTCTTTGAGGATGAAGAGCCCAAAAAA
GCCGAGGGTTTCTGAAGAAATTTCTGAGAAAGAGAAGTTTAAAGTTTCGG
AGGAGGTTTCTAGGATTGACAAGCCAAAGGAAGAAGGGGAGAAAAATGAA
GATGGTCTTGGGAATCTTGGGGGCGTAAAAGCTCTAAATTGTGTTAAAAA
TGCTGGTGTTGGATCCAATTTAGAGGCAGTTTCTGAATCTCGCGGTGTTA
ACAAGTGTATCACAGAAGTTCCATTGCCTCGGAGTGCCACTTTAACAACT
GTAGCTGGAGCTGAGATACCTCCCGAAGATGTTGGACATGCATTGCAGTT
CTTAGAATTTTGTGCAGCTTTTGGAAAGGTTCTGGATTTGAAGAAAGGAC
AAGCTGAATGTATTATTAGAGAATTGATGGGTGGGCGGAGTAGGCGCCGA
GGGCTAGGCTTTCCAATGGTCCAAATTCATATCCAATTGCTGTCTTTGGT
CCAAAAGGATATGGGAGAAGAGTCTCCATTGAGTTCAACAAGTGGAAAAC
ATTCATGGTTGCAGGCTCTTAGCAAATGTGTCTCTAATTCCAAATGTCCA
TTGAATGATATACCTTCTAACTGTTTTGATTGTGGAGGTGATGGATATCA
TCAGTTAGATGGGTCAAAAAAGCTTAAgctgttgaattttttatgtgaTG
AAGCTCTAGGCACCACAGCGCTGAGGAATTGGATTGATGATCAAAATTCA
GAATTTGTTGAAAAAGTGAAGGaatcaagagaaaaatttgttgcagcaaa
agaaaaggaaaaaaaattgaagcaaaAATTGCAAGATGAGGTGGCCAAAG
CAATTATCACTAATGGTGCTCCCTTGTCAATTTCTGAGCATGAAGCTATT
GTTTCAGAGATAAAAAGGAAAGCAGCTGAAGCACATTCTGAGATGACAGA
GGCAAAAGGCATGGCTTTCAAGAAGAAACAACGATCTGATGCTGTTAGAA
CGGAGCCTATTATAAAGGAAGACAATGGCTGTGCCTTTTGGAGATTGAAG
GGCTGTAATGGTGGACGGGCTATTTTGGTTCAAGAGGTGAATGGAACCCC
AGATGCAGTTTCACCCAGCGAAAAATGGTTTGCCTATGATGCTGATCAGG
TACCAGCAGTTGAGAAATATCTCTCTTCAAAAAGATCCGGTGTCCGGAGC
AATTGTGATCTTgcattttggttttga

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR040221	CDCA7/CDA7L
IPR018501	DDT_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of DNA-templated transcription