gene-KPL71_019383-mRNA1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of gene-KPL71_019383-mRNA1 vs. DB:SwissProt
Match: CASP6_POPTR (Casparian strip membrane protein 6 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_569472 PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 7.730e-72 Identity = 129/185 (69.73%), Postives = 152/185 (82.16%), Query Frame = 2 Query: 239 MKAGAVEIGEAKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSLTFFVAANAVVSGYXXXXXXXXXFHIVRSRAQKSRILLVFFDTXXXXXXXXXXXXXXXXXXXXHKGNPKANWFNICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVALSRR 793 MKAG +E+GE K+S P VN+G++ILDF+LR+LAF G LGSAI+M TTNETLPFF+Q IRFRAEYDDLP+ TFFV AN VVS YL+ SL SIF+IVRS+AQ SRILL+ DTAML LL+ ASAAAAIVYLAH+GN + NW ICQQFNSFC+RISGSLIGSF+G+ + IL+I L VALSR Sbjct: 1 MKAGPIELGEGKSSAPKAAVNRGVAILDFILRILAFIGTLGSAISMATTNETLPFFTQFIRFRAEYDDLPTFTFFVVANGVVSAYLLFSLPFSIFNIVRSKAQNSRILLIILDTAMLGLLSAGASAAAAIVYLAHQGNVRTNWSAICQQFNSFCERISGSLIGSFIGVVVFILLISLSAVALSRH 185
BLAST of gene-KPL71_019383-mRNA1 vs. DB:SwissProt
Match: CASP5_RICCO (Casparian strip membrane protein 5 OS=Ricinus communis OX=3988 GN=RCOM_0299440 PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 9.199e-72 Identity = 134/185 (72.43%), Postives = 155/185 (83.78%), Query Frame = 2 Query: 239 MKAGAVEIGEAKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSLTFFVAANAVVSGYXXXXXXXXXFHIVRSRAQKSRILLVFFDTXXXXXXXXXXXXXXXXXXXXHKGNPKANWFNICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVALSRR 793 MK A+E+G AK+STP G N+G+SILDF+LRL+A G L SAI MGTTNETLPF +Q IRFRAEYDDLP+ TFFV AN VVSGYL+LSL LSI +IVRS A+ RI+L+ FDTAMLALLT ASAAAAIVYLAHKGN +ANWF ICQQFNSFC+RISGSLIGSFVG+A+ IL+I++ ALSRR Sbjct: 1 MKTDAIELGVAKDSTPIGGANRGVSILDFILRLVALVGTLASAILMGTTNETLPFATQFIRFRAEYDDLPTFTFFVVANIVVSGYLLLSLPLSIVNIVRSTAKNRRIILIIFDTAMLALLTAGASAAAAIVYLAHKGNTRANWFAICQQFNSFCERISGSLIGSFVGVAVFILLILMSASALSRR 185
BLAST of gene-KPL71_019383-mRNA1 vs. DB:SwissProt
Match: CASP1_SOLTU (Casparian strip membrane protein 1 OS=Solanum tuberosum OX=4113 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 8.767e-67 Identity = 124/185 (67.03%), Postives = 152/185 (82.16%), Query Frame = 2 Query: 239 MKAGAVEIGEAKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSLTFFVAANAVVSGYXXXXXXXXXFHIVRSRAQKSRILLVFFDTXXXXXXXXXXXXXXXXXXXXHKGNPKANWFNICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVALSRR 793 MKAGA+E+G A +T + GVN+G+SILD +R++A LGSAIAMGTTNETLPFF+Q +RF+A+Y DLP+ TFFV ANA+VS YL+LSL LSI+HI+RSRAQ +RI L+FFD AML LLTG ASA+AAIVYLAHKGN K NWF ICQQ++SFC R SGSL+GSF G L+IL+I L +ALSR+ Sbjct: 1 MKAGALELGHASKTTKS-GVNRGMSILDLFIRIIAIIATLGSAIAMGTTNETLPFFTQFVRFKAKYSDLPTFTFFVVANAIVSAYLVLSLGLSIYHIMRSRAQATRIALIFFDAAMLGLLTGGASASAAIVYLAHKGNRKTNWFPICQQYDSFCHRTSGSLVGSFAGSVLIILLIFLSAIALSRQ 184
BLAST of gene-KPL71_019383-mRNA1 vs. DB:SwissProt
Match: CASP7_SOYBN (CASP-like protein 7 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.043e-66 Identity = 120/185 (64.86%), Postives = 153/185 (82.70%), Query Frame = 2 Query: 239 MKAGAVEIGE-AKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSLTFFVAANAVVSGYXXXXXXXXXFHIVRSRAQKSRILLVFFDTXXXXXXXXXXXXXXXXXXXXHKGNPKANWFNICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVALSR 790 MK G++E GE +K+++P GV +G+SI+DF+LR++A LGSA+AMGTTNETLPF +Q I+FRAE+DDLPSL FFV ANAVV GYL+LSL +S+FHI+RS KSRILLV DT ML+L+T SASAA +IVY+AH GN ANWF ICQQ+N+FC+RISGSLIGS++ +AL I++IML VA+SR Sbjct: 1 MKGGSIEAGEVSKDASPRKGVARGLSIMDFILRIIAAVATLGSALAMGTTNETLPFATQFIKFRAEFDDLPSLVFFVMANAVVCGYLVLSLMISVFHILRSTPVKSRILLVALDTVMLSLVTASASAATSIVYIAHNGNTGANWFAICQQYNNFCERISGSLIGSYIAVALFIILIMLSLVAISR 185
BLAST of gene-KPL71_019383-mRNA1 vs. DB:SwissProt
Match: CASP3_ORYSJ (Casparian strip membrane protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0231050 PE=3 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 1.697e-64 Identity = 120/182 (65.93%), Postives = 149/182 (81.87%), Query Frame = 2 Query: 248 GAVEIGEAKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSLTFFVAANAVVSGYXXXXXXXXXFHIVRSRAQKSRILLVFFDTXXXXXXXXXXXXXXXXXXXXHKGNPKANWFNICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVALSRR 793 G+ E GE + + GV+KG+SILD +LR +A G L SAIAMGTTN+TLPFF+Q IRF+A+Y DLP+LTFFV AN++VS YLILSL LSI H++RSRA+ SR++L+FFD AMLAL+T ASAAAAIVYLAHKGN +ANW ICQQF+SFC+RISGSLIGSF M +L+L+I L +AL+RR Sbjct: 3 GSEEHGETSKAPLSRGVSKGVSILDVILRFVAIIGTLASAIAMGTTNQTLPFFTQFIRFKAQYSDLPTLTFFVVANSIVSAYLILSLPLSIVHVIRSRAKYSRLILIFFDAAMLALVTAGASAAAAIVYLAHKGNARANWLAICQQFDSFCERISGSLIGSFAAMVVLVLLIFLSAIALARR 184
BLAST of gene-KPL71_019383-mRNA1 vs. DB:SwissProt
Match: CASP3_ORYSI (Casparian strip membrane protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_22263 PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 1.697e-64 Identity = 120/182 (65.93%), Postives = 149/182 (81.87%), Query Frame = 2 Query: 248 GAVEIGEAKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSLTFFVAANAVVSGYXXXXXXXXXFHIVRSRAQKSRILLVFFDTXXXXXXXXXXXXXXXXXXXXHKGNPKANWFNICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVALSRR 793 G+ E GE + + GV+KG+SILD +LR +A G L SAIAMGTTN+TLPFF+Q IRF+A+Y DLP+LTFFV AN++VS YLILSL LSI H++RSRA+ SR++L+FFD AMLAL+T ASAAAAIVYLAHKGN +ANW ICQQF+SFC+RISGSLIGSF M +L+L+I L +AL+RR Sbjct: 3 GSEEHGETSKAPLSRGVSKGVSILDVILRFVAIIGTLASAIAMGTTNQTLPFFTQFIRFKAQYSDLPTLTFFVVANSIVSAYLILSLPLSIVHVIRSRAKYSRLILIFFDAAMLALVTAGASAAAAIVYLAHKGNARANWLAICQQFDSFCERISGSLIGSFAAMVVLVLLIFLSAIALARR 184
BLAST of gene-KPL71_019383-mRNA1 vs. DB:SwissProt
Match: CASP3_VITVI (Casparian strip membrane protein 3 OS=Vitis vinifera OX=29760 GN=VIT_14s0108g01050 PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 2.734e-64 Identity = 126/168 (75.00%), Postives = 146/168 (86.90%), Query Frame = 2 Query: 239 MKAGAVEIGE-AKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSLTFFVAANAVVSGYXXXXXXXXXFHIVRSRAQKSRILLVFFDTXXXXXXXXXXXXXXXXXXXXHKGNPKANWFNICQQFNSFCQRISGSLIGSFVG 739 MKAGA+E+GE +K S P GVN+GISILDF+LRL+ G LGSAIAMGTTNETLPFF+Q +FRAEYDDLP+ TFFV AN++VSGYL+LSL +SI HIVRS A+ SRI+L+FFDTAMLALLT +ASAA+AIVYLAHKGN +ANWF ICQQF SFC+RISGSLIGSF G Sbjct: 1 MKAGALELGEGSKTSIPRGGVNRGISILDFILRLITIIGTLGSAIAMGTTNETLPFFTQFTQFRAEYDDLPTFTFFVIANSIVSGYLVLSLPMSILHIVRSGARASRIVLIFFDTAMLALLTAAASAASAIVYLAHKGNAQANWFAICQQFKSFCERISGSLIGSFGG 168
BLAST of gene-KPL71_019383-mRNA1 vs. DB:SwissProt
Match: CASP3_MEDTR (Casparian strip membrane protein 3 OS=Medicago truncatula OX=3880 GN=MTR_7g011090 PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 6.129e-62 Identity = 115/184 (62.50%), Postives = 144/184 (78.26%), Query Frame = 2 Query: 242 KAGAVEIGEAKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSLTFFVAANAVVSGYXXXXXXXXXFHIVRSRAQKSRILLVFFDTXXXXXXXXXXXXXXXXXXXXHKGNPKANWFNICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVALSRR 793 K+ VE+GE K S + +G+SILDF+LRL+A L SAIAMGTT+E+LPFF+Q +RFRA YDDLP+L FFV A+A+VSGYLILSL LSI HI+RS A +R++ + DT ML LLT +SAAA+IVYLAHKGN KANWF CQQ+NSFC+RISGSLIGSF+ + L I++I+L + LSRR Sbjct: 3 KSTYVELGEEKTSNQKGNMKRGVSILDFILRLIAIVATLASAIAMGTTDESLPFFTQFVRFRANYDDLPTLRFFVVASAIVSGYLILSLPLSILHIIRSSAGMTRVIFIILDTVMLGLLTAGSSAAASIVYLAHKGNRKANWFAFCQQYNSFCERISGSLIGSFIAIPLFIMLILLSALVLSRR 186
BLAST of gene-KPL71_019383-mRNA1 vs. DB:SwissProt
Match: CASP1_MEDTR (Casparian strip membrane protein 1 OS=Medicago truncatula OX=3880 GN=MTR_5g041900 PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 3.934e-60 Identity = 113/185 (61.08%), Postives = 146/185 (78.92%), Query Frame = 2 Query: 239 MKAGAVEIGE-AKNSTPTYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSLTFFVAANAVVSGYXXXXXXXXXFHIVRSRAQKSRILLVFFDTXXXXXXXXXXXXXXXXXXXXHKGNPKANWFNICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVALSR 790 MK G++E+GE +KN++ GV +G+SI+DF+LR++A L SA+AMGTT+E LPF + ++FRAEYDDLPS FFV AN++V GYL LSL LSI HIVRS A KSRILL+ D M+ LL +ASAAA+IVY+AH GN +ANWF ICQQ+NSFC+RISGSLIGS++ +AL I+II+L A+SR Sbjct: 1 MKGGSIELGEVSKNASTNKGVKRGLSIMDFILRIIAGVATLASAVAMGTTDERLPFATSFVQFRAEYDDLPSFVFFVLANSIVCGYLALSLILSILHIVRSTAVKSRILLIVLDMVMMGLLAAAASAAASIVYIAHYGNTQANWFPICQQYNSFCERISGSLIGSYIAVALFIIIILLSQSAISR 185
BLAST of gene-KPL71_019383-mRNA1 vs. DB:SwissProt
Match: CASP6_ORYSI (Casparian strip membrane protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=H0219H12.8 PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 9.988e-60 Identity = 120/185 (64.86%), Postives = 145/185 (78.38%), Query Frame = 2 Query: 254 VEIGEAKNSTP-----TYGVNKGISILDFVLRLLAFAGALGSAIAMGTTNETLPFFSQLIRFRAEYDDLPSLTFFVAANAVVSGYXXXXXXXXXFHIVRSRAQKSRILLVFFDTXXXXXXXXXXXXXXXXXXXXHKGNPKANWFNICQQFNSFCQRISGSLIGSFVGMALLILIIMLCGVALSRR 793 +E GE + P GVN+ ++++D LR +A G +GSAIAMGTTNETLPFF+Q I+F A+Y DLPS TFFVAANAVV YL+LS+ LSI HI+R RA+ SR+ LVFFDTAMLALLT ASAAAAIVYLAHKGN +ANWF+ICQQF+SFC+RISGSLIGSF M LL+++I L AL+RR Sbjct: 1 MEHGEISSKAPLVAPVAAGVNRAVAVVDTFLRFIAIIGTIGSAIAMGTTNETLPFFTQFIQFEAKYSDLPSFTFFVAANAVVCTYLVLSIPLSIVHILRPRARYSRLFLVFFDTAMLALLTAGASAAAAIVYLAHKGNVRANWFSICQQFDSFCERISGSLIGSFAAMVLLVVLITLSAFALARR 185 The following BLAST results are available for this feature:
BLAST of gene-KPL71_019383-mRNA1 vs. DB:SwissProt
Analysis Date: 2023-04-17 (BLAST: C. sinensis DVS_B v1.0) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro: C. sinensis DVS_B v1.0
Date Performed: 2023-04-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >gene-KPL71_019383-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_019383-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_019383-mRNA1; organism=Citrus sinensis; type=mRNA; length=951bpback to top protein sequence of gene-KPL71_019383-mRNA1_Citrus_sinensis_DVS_B_v1 >gene-KPL71_019383-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_019383-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_019383-mRNA1_Citrus_sinensis_DVS_B_v1; organism=Citrus sinensis; type=polypeptide; length=185bpback to top mRNA from alignment at CM039175.1_Chr6_DVS_B:24794905..24796079+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=1175bp; location=Sequence derived from: CM039175.1_Chr6_DVS_B:24794905..24796079+ (Citrus sinensisback to top Coding sequence (CDS) from alignment at CM039175.1_Chr6_DVS_B:24794905..24796079+ >gene-KPL71_019383-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_019383-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_019383-mRNA1; organism=Citrus sinensis; type=CDS; length=558bp; location=Sequence derived from: CM039175.1_Chr6_DVS_B:24794905..24796079+ (Citrus sinensisback to top |