hap1-g10687.t2
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of hap1-g10687.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2H5PIP6|A0A2H5PIP6_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_140200 PE=4 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 3.343e-86 Identity = 153/162 (94.44%), Postives = 158/162 (97.53%), Query Frame = 0 Query: 1 MENNSMNSINNSQSKVISSSNNERTISDGDLEESGWTMYFDDFFNQQNTENSSFSSLLESSLISDAAFSAANYNKVAGNEHAMGFSQGKRCDRFSFKKKKTKVVAGVDDDLEDTASSPAHSPKVCNTMSEYSDKRPDQNNIMDILEENGSSSSARQVEERSG 162 MENNSMNSINNSQ+KVISSSNNERT+SDGDLEESGWTMYFDDFFNQQNTENSSFSSLLESSLISDAAFSAANYNKVAGNE AMGFSQ KRCDRFSFKKKKTKVVAGVDDDLEDTASSP+HSPKVCNTMSEY DKRPDQNNIMDILEE+G SSSAR+VEERSG Sbjct: 1 MENNSMNSINNSQNKVISSSNNERTMSDGDLEESGWTMYFDDFFNQQNTENSSFSSLLESSLISDAAFSAANYNKVAGNEQAMGFSQEKRCDRFSFKKKKTKVVAGVDDDLEDTASSPSHSPKVCNTMSEYLDKRPDQNNIMDILEEDGGSSSARRVEERSG 162
BLAST of hap1-g10687.t2 vs. ExPASy TrEMBL (2024)
Match: tr|V4TXX1|V4TXX1_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10009727mg PE=4 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 5.229e-85 Identity = 153/162 (94.44%), Postives = 157/162 (96.91%), Query Frame = 0 Query: 1 MENNSMNSINNSQSKVISSSNNERTISDGDLEESGWTMYFDDFFNQQNTENSSFSSLLESSLISDAAFSAANYNKVAGNEHAMGFSQGKRCDRFSFKKKKTKVVAGVDDDLEDTASSPAHSPKVCNTMSEYSDKRPDQNNIMDILEENGSSSSARQVEERSG 162 MENNSMNSINNSQSKVISSSNN RT+SDGDLEESGWTMYFDDFFNQQNTENSSFSSLLESSLISDAAFSAANYNKVAGNE AMGFSQ KRCDRFSFKKKKTKVVAGVDDDLEDTASSP+HSPKVCNTMSEY DKRPDQNNIMDILEE+G SSSAR+VEERSG Sbjct: 1 MENNSMNSINNSQSKVISSSNNGRTMSDGDLEESGWTMYFDDFFNQQNTENSSFSSLLESSLISDAAFSAANYNKVAGNEQAMGFSQEKRCDRFSFKKKKTKVVAGVDDDLEDTASSPSHSPKVCNTMSEYLDKRPDQNNIMDILEEDGGSSSARRVEERSG 162
BLAST of hap1-g10687.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A067E4X9|A0A067E4X9_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g043217mg PE=4 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 1.992e-78 Identity = 129/137 (94.16%), Postives = 133/137 (97.08%), Query Frame = 0 Query: 26 ISDGDLEESGWTMYFDDFFNQQNTENSSFSSLLESSLISDAAFSAANYNKVAGNEHAMGFSQGKRCDRFSFKKKKTKVVAGVDDDLEDTASSPAHSPKVCNTMSEYSDKRPDQNNIMDILEENGSSSSARQVEERSG 162 +SDGDLEESGWTMYFDDFFNQQNTENSSFSSLLESSLISDAAFSAANYNKVAGNE AMGFSQ KRCDRFSFKKKKTKVVAGVDDDLEDTASSP+HSPKVCNTMSEY DKRPDQNNIMDILEE+G SSSAR+VEERSG Sbjct: 1 MSDGDLEESGWTMYFDDFFNQQNTENSSFSSLLESSLISDAAFSAANYNKVAGNEQAMGFSQEKRCDRFSFKKKKTKVVAGVDDDLEDTASSPSHSPKVCNTMSEYLDKRPDQNNIMDILEEDGGSSSARRVEERSG 137
BLAST of hap1-g10687.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A061F6J6|A0A061F6J6_THECC (CTD small phosphatase-like protein 2, putative OS=Theobroma cacao OX=3641 GN=TCM_030992 PE=4 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.260e-40 Identity = 88/169 (52.07%), Postives = 110/169 (65.09%), Query Frame = 0 Query: 32 EESGWTMYFDDFFNQ---QNTENSSFSSLL---ESSLISDAAFSAANYNKVAGNEHAMGFSQGKRCDRFSFKKKKTKVVAGVDDDLEDTASSPAHSPKVCNTMSEYSDKRPDQNNIMDILEENGSSSSARQVEERSGDGSINGR-DNETELKKRGLCLAPLSMIVDYLG 193 EES WTMYF+ N+ + ENSSFSS + SSL+SDAA SAA H G GK C+R SFKK+K VDDDLEDTASSPA+SPKVCN ++ + DK Q ++MD +E GS+S Q++ER+ + + GR D+ TELKK GLCL PLSM+V YLG Sbjct: 23 EESSWTMYFESLSNKNSDMDVENSSFSSDINYQSSSLVSDAACSAAG-------RHDFGAPLGKSCNRLSFKKRKCNKGRLVDDDLEDTASSPANSPKVCNLINHF-DKNLKQKDVMDKSQEKGSASG--QIDERNDELGLIGREDDGTELKKMGLCLVPLSMVVHYLG 181
BLAST of hap1-g10687.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6J1AM60|A0A6J1AM60_9ROSI (Uncharacterized protein LOC110419532 OS=Herrania umbratica OX=108875 GN=LOC110419532 PE=4 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 4.940e-40 Identity = 91/169 (53.85%), Postives = 111/169 (65.68%), Query Frame = 0 Query: 32 EESGWTMYFDDF---FNQQNTENSSFSSLL---ESSLISDAAFSAANYNKVAGNEHAMGFSQGKRCDRFSFKKKKTKVVAGVDDDLEDTASSPAHSPKVCNTMSEYSDKRPDQNNIMDILEENGSSSSARQVEERSGDGSINGR-DNETELKKRGLCLAPLSMIVDYLG 193 EES WTMYF+DF N + ENSSFSS + SSL+SDAA SAA H G GK C+R SFKKKK VDDDLEDTASSPA+SPKVCN ++ + DK Q ++MDI +E G +S Q++ER+ + + GR D+ TELKK GLCL PLSM+V YLG Sbjct: 23 EESSWTMYFEDFSNNNNDVDVENSSFSSDINYQSSSLVSDAACSAAG-------RHVFGAPLGKSCNRLSFKKKKGNKGRLVDDDLEDTASSPANSPKVCNLINHF-DKNLKQKDVMDISQEKGRASG--QIDERNDELGLIGREDDGTELKKMGLCLVPLSMVVHYLG 181
BLAST of hap1-g10687.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA39VX51|A0AA39VX51_ACESA (Uncharacterized protein OS=Acer saccharum OX=4024 GN=LWI29_027446 PE=4 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.915e-37 Identity = 101/207 (48.79%), Postives = 134/207 (64.73%), Query Frame = 0 Query: 10 NNSQSKVISSS--NNERTISDGDLEESGWTMYFDDFFNQQN------TENSSFSSL-------LESSLISDAAFSAANYNKVAGNEH-AMGFSQGKRCDRFS-FKKKKTKVVAGVDDDLEDTASSPAHSPKVCNTMSEYSDKRPDQNNIMDILEENGSSSSARQVEE-RSGDGSINGRDNE------TELKKRGLCLAPLSMIVDYL 192 NN++ ++SSS + + D + EESGWTMYFDD+FN+ N +NSS S+ LES++ISDAA SAA + MGFS K C R S FKK+KTK+V +D+DL DTA+SPA+SPKV + M++ D++P Q NIMD+ ++ GS+S QV+E RSG GSIN DN +EL K+GLCL PLSMIV+YL Sbjct: 25 NNNERMLLSSSGVSGDHDHQDQEQEESGWTMYFDDYFNKYNYNHDDDQKNSSMISMGDHHHHHLESNIISDAASSAAKKFAHHDQQQQVMGFSLDKTCYRSSSFKKRKTKIVF-LDEDLRDTATSPANSPKVYDLMNQL-DRKPQQKNIMDMSKDKGSTSRNVQVDEFRSGFGSINDDDNNGRDNDSSELNKKGLCLVPLSMIVNYL 229
BLAST of hap1-g10687.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1Q3AY59|A0A1Q3AY59_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_04179 PE=4 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 3.370e-37 Identity = 97/190 (51.05%), Postives = 122/190 (64.21%), Query Frame = 0 Query: 11 NSQSKVISSSNNERTISDGDLEESGWTMYFDDFF--NQQNTENSSFSSLLE-SSLISDAAFSAANYNKVAG-NEHAMGFSQGKRCDRFS-FKKKKTKVVAGVDDDLEDTASSPAHSPKVCNTMSEYSDKRPDQNNIMDILEENGSSSSARQVEERSGDGSINGRDNE--TELKKRGLCLAPLSMIVDYLG 193 NS SK +S + T +D EESGWTMY +DF N ++ E S+SS +E SSLISDAA S K A NEH +GFS K C + S KKKK+K V VDD LEDTASSP SPK+C+ M + K P Q + M I +E GS+SS +++ERSG G I GRDN+ ELKKR LCL PLS++ ++ G Sbjct: 2 NSMSKALS---GDETTTDCQ-EESGWTMYLEDFSANNNEDNEKISYSSGIEGSSLISDAASSVTK--KCADINEHVVGFSLEKSCHKLSVIKKKKSKGVL-VDDALEDTASSPVASPKICSLM-KLLGKDPKQKDSMGISQEKGSTSS--KIDERSGLGFI-GRDNDYTEELKKRALCLVPLSLVANFPG 180
BLAST of hap1-g10687.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A438ISP7|A0A438ISP7_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_021396 PE=4 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 4.532e-37 Identity = 91/172 (52.91%), Postives = 105/172 (61.05%), Query Frame = 0 Query: 32 EESGWTMYFDDFFNQQNTENSSFSS---------LLESSLISDAAFSAANYNKVAGNEHAMGFSQGKRCDRFSFKKKKTKVVAGVDDDLEDTASSPAHSPKVCNTMSEYSDKRPDQNNIMDILEENGSSSSARQVEERSGDGSINGRDNE-TELKKRGLCLAPLSMIVDYLG 193 EESGWTMYF+DF N E+SS S SSL+SDAA SA K+ N+H S KRC + SFKK+KTK A VDD LEDTASSP SPKV + + D P + I DI +E GSS RQ ER + GRD++ TELKKRGLCL PLSMIVDYLG Sbjct: 23 EESGWTMYFEDFL--ANKEHSSSPSGNYSRASYGYGSSSLVSDAASSAGK--KLVDNDHVAVLSLEKRCKKLSFKKRKTKG-AVVDDALEDTASSPVTSPKVVFDLRQL-DMNPKEKAI-DISKEKGSS--YRQTNERGDEVGFIGRDSDCTELKKRGLCLVPLSMIVDYLG 185
BLAST of hap1-g10687.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6P5WNH7|A0A6P5WNH7_DURZI (Uncharacterized protein LOC111276144 OS=Durio zibethinus OX=66656 GN=LOC111276144 PE=4 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 6.180e-37 Identity = 89/172 (51.74%), Postives = 114/172 (66.28%), Query Frame = 0 Query: 32 EESGWTMYFDDFFNQQNT---ENSSFSSLL---ESSLISDAAFSAANYNKVAGNEHAMGFS-QGKRCDRFSFKKKKTKVVAG-VDDDLEDTASSPAHSPKVCNTMSEYSDKRPDQNNIMDILEENGSSSSARQVEERSGDG-SINGRDNE-TELKKRGLCLAPLSMIVDYLG 193 EES WTMYF+DF N N E+SSFSS + SSL+SDAA SAA H G S K + SF+K+KTK AG V+DDLEDTASSPA+SP+VCN ++ + DK Q + ++ +E G +S Q++ER+GD NGR+N+ TELKK+GLCL PLSM+V YLG Sbjct: 28 EESSWTMYFEDFSNNNNVHMNESSSFSSDMNYQTSSLVSDAASSAAR-------RHVFGASLDHKSYNSLSFRKRKTKGSAGLVNDDLEDTASSPANSPEVCNLVNHF-DKNLKQKDAKEMSQEKGGASG--QIDERNGDELGFNGRENDGTELKKKGLCLVPLSMVVHYLG 189
BLAST of hap1-g10687.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A438DXQ0|A0A438DXQ0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_082787 PE=4 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 7.196e-37 Identity = 91/173 (52.60%), Postives = 105/173 (60.69%), Query Frame = 0 Query: 32 EESGWTMYFDDFFNQQNTENSSFSS----------LLESSLISDAAFSAANYNKVAGNEHAMGFSQGKRCDRFSFKKKKTKVVAGVDDDLEDTASSPAHSPKVCNTMSEYSDKRPDQNNIMDILEENGSSSSARQVEERSGDGSINGRDNE-TELKKRGLCLAPLSMIVDYLG 193 EESGWTMYF+DF N E+SS S SSL+SDAA SA K+ N+H S KRC + SFKK+KTK A VDD LEDTASSP SPKV + + D P + I DI +E GSS RQ ER + GRD++ TELKKRGLCL PLSMIVDYLG Sbjct: 23 EESGWTMYFEDFL--ANKEHSSSPSAGNYGRASYGYGSSSLVSDAASSAGK--KLVDNDHVAVLSLEKRCKKLSFKKRKTKG-AVVDDALEDTASSPVTSPKVVFDLRQL-DMNPKEKAI-DISKEKGSS--YRQTNERGDEVGFIGRDSDCTELKKRGLCLVPLSMIVDYLG 186
BLAST of hap1-g10687.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LSZ3|VUP1_ARATH (Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.685e-14 Identity = 63/189 (33.33%), Postives = 90/189 (47.62%), Query Frame = 0 Query: 32 EESGWTMYFDDFFNQQNT---------ENSSFSSLLES-SLISDAAFSAANYNKVAGNEHAMGFSQGKRCDRFSFKKKKTKVVAGVDDDLEDTASSPAHSPKVCNTMSEYSDKRPDQNNIMDILEENGSSSSAR-----QVEERSG------------DGSINGRDNETELKKRGLCLAPLSMIVDYLG 193 EESGWT Y DDF NQ T + SS+S L S SL+SDAA A +G + F + F + +TK + DD LEDTASSP +SPKV S + + I D + + + R Q++ + G DG+ N +N +L+ RGLC+ P+SM+ ++ G Sbjct: 36 EESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHA-----FSGKSFPVNFPA-----KLKFGRGRTKKICE-DDSLEDTASSPVNSPKV----SHFEHIQTPPRKIEDYVSSSFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGNNNNNNNNMDLRSRGLCVVPISMLANFNG 209
BLAST of hap1-g10687.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q5BPG5|VUP4_ARATH (Vascular-related unknown protein 4 OS=Arabidopsis thaliana OX=3702 GN=VUP4 PE=2 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 9.760e-11 Identity = 52/169 (30.77%), Postives = 78/169 (46.15%), Query Frame = 0 Query: 28 DGDLEESGWTMYFDDFFNQQNTENSSFSSLLESSLISDAAFSAANYNKVAGNEHAMGFSQGKRCDRFSFKKKKTKVVA-GVDDDLEDTASSPAHSPKVCNTMSEYSDKRPDQNNIMDILEENGSSSSARQV--EERSGDGSINGRDNETELKKRGLCLAPLSMIVDYLG 193 D + EES WTMYF+DFF SS+++ S ++ S A + +G D K+ + + + G DLEDTASSP+ SP V + M+ L++N + V +E+ N +LKK+GLCL PLSM+ ++LG Sbjct: 22 DQNPEESSWTMYFEDFFEAS-------SSIVDVGDFSSSSVSDAASFVATKKTLNVSKQEGSNLD---IKRTRNREIPFGRHHDLEDTASSPSGSPNVYSMMN---------------LQDNNTRHGGGIVGDDEKRVSAVPNQGGLPIDLKKKGLCLVPLSMVTNFLG 165
BLAST of hap1-g10687.t2 vs. Araport11
Match: | (Symbols: VUP1 | VASCULAR-RELATED UNKNOWN PROTEIN 1 | chr3:7648380-7649533 FORWARD LENGTH=211) HSP 1 Score: 72.0182 bits (175), Expect = 1.732e-15 Identity = 63/189 (33.33%), Postives = 90/189 (47.62%), Query Frame = 0 Query: 32 EESGWTMYFDDFFNQQNT---------ENSSFSSLLES-SLISDAAFSAANYNKVAGNEHAMGFSQGKRCDRFSFKKKKTKVVAGVDDDLEDTASSPAHSPKVCNTMSEYSDKRPDQNNIMDILEENGSSSSAR-----QVEERSG------------DGSINGRDNETELKKRGLCLAPLSMIVDYLG 193 EESGWT Y DDF NQ T + SS+S L S SL+SDAA A +G + F + F + +TK + DD LEDTASSP +SPKV S + + I D + + + R Q++ + G DG+ N +N +L+ RGLC+ P+SM+ ++ G Sbjct: 36 EESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHA-----FSGKSFPVNFPA-----KLKFGRGRTKKICE-DDSLEDTASSPVNSPKV----SHFEHIQTPPRKIEDYVSSSFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGNNNNNNNNMDLRSRGLCVVPISMLANFNG 209
BLAST of hap1-g10687.t2 vs. Araport11
Match: | (Symbols: VUP4 | VASCULAR-RELATED UNKNOWN PROTEIN 4 | chr5:22254195-22255489 REVERSE LENGTH=165) HSP 1 Score: 61.2326 bits (147), Expect = 7.451e-12 Identity = 53/170 (31.18%), Postives = 79/170 (46.47%), Query Frame = 0 Query: 28 DGDLEESGWTMYFDDFFNQQNTENSSFSSLLESSLISDAAFSAANYNKVAGNEHAMGFSQGKRCDRFSFKKKKTKVVA-GVDDDLEDTASSPAHSPKVCNTMSEYSDKRPDQNNIMDILEENGSSSSARQV--EERSGDGSINGRDNETELKKRGLCLAPLSMIVDYLG* 194 D + EES WTMYF+DFF SS+++ S ++ S A + +G D K+ + + + G DLEDTASSP+ SP V + M+ L++N + V +E+ N +LKK+GLCL PLSM+ ++LG* Sbjct: 22 DQNPEESSWTMYFEDFFEAS-------SSIVDVGDFSSSSVSDAASFVATKKTLNVSKQEGSNLD---IKRTRNREIPFGRHHDLEDTASSPSGSPNVYSMMN---------------LQDNNTRHGGGIVGDDEKRVSAVPNQGGLPIDLKKKGLCLVPLSMVTNFLG* 166
BLAST of hap1-g10687.t2 vs. Araport11
Match: | (Symbols: VUP1 | VASCULAR-RELATED UNKNOWN PROTEIN 1 | chr3:7648380-7649138 FORWARD LENGTH=175) HSP 1 Score: 58.151 bits (139), Expect = 1.357e-10 Identity = 44/105 (41.90%), Postives = 55/105 (52.38%), Query Frame = 0 Query: 32 EESGWTMYFDDFFNQQNTEN---------SSFSSLLES-SLISDAAFSAANYNKVAGNEHAMGFSQGKRCDRFSFKKKKTKVVAGVDDDLEDTASSPAHSPKVCN 126 EESGWT Y DDF NQ T + SS+S L S SL+SDAA A +G + F + F + +TK + DD LEDTASSP +SPKV + Sbjct: 36 EESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTSLVSDAATHA-----FSGKSFPVNFPA-----KLKFGRGRTKKICE-DDSLEDTASSPVNSPKVSH 129
BLAST of hap1-g10687.t2 vs. Araport11
Match: | (Symbols: VUP3 | VASCULAR-RELATED UNKNOWN PROTEIN 3 | chr3:7180140-7180731 FORWARD LENGTH=130) HSP 1 Score: 53.1434 bits (126), Expect = 4.068e-9 Identity = 54/175 (30.86%), Postives = 78/175 (44.57%), Query Frame = 0 Query: 20 SNNERTISDGDLEESGWTMYFDDFFNQQNTENSSFSSLLESSLISDAAFSAANYNKVAGNEHAMGFSQGKRCDRFSFKKKKTKVVAGVDDDLEDTASSPAHSPKVCNTMSEYSDKRPDQNNIMDILEENGSSSSARQVEERSGDGSINGRDNETELKKRGLCLAPLSMIVDYLG* 194 SN +RT+ +G LEES WTMYF+ TE+ +SS++SDAA MG + EDTASSP++ + + M + + + NN +EE + + ++EE ELKKRGLCL PLSM+ +Y+G* Sbjct: 16 SNQQRTMQEG-LEESSWTMYFE-------TEDG-LGHYDDSSMMSDAA-------------SPMGCVE------------------------EDTASSPSNRTEGYSGMEDNTIEEKTMNN--GKIEEKILNKNGIKIEEYCA-----------ELKKRGLCLVPLSMLSNYIG* 131 The following BLAST results are available for this feature:
BLAST of hap1-g10687.t2 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of hap1-g10687.t2 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs UniProt Swissprot) Total hits: 2 Position : 0 Zoom : x 1
BLAST of hap1-g10687.t2 vs. Araport11
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs Araport11) Total hits: 4 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus garrawayi UQ v1.0 proteins
Date Performed: 2024-10-02 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >hap1-g10687.t2_Cgarrawayi-UQ_v1 ID=hap1-g10687.t2_Cgarrawayi-UQ_v1; Name=hap1-g10687.t2; organism=Citrus garrawayi; type=mRNA; length=582bpback to top protein sequence of hap1-g10687.t2_Cgarrawayi-UQ_v1 >hap1-g10687.t2_Cgarrawayi-UQ_v1 ID=hap1-g10687.t2_Cgarrawayi-UQ_v1; Name=hap1-g10687.t2_Cgarrawayi-UQ_v1; organism=Citrus garrawayi; type=polypeptide; length=194bpback to top mRNA from alignment at hap1-C.garr_04:22478787..22479643- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=857bp; location=Sequence derived from: hap1-C.garr_04:22478787..22479643- (Citrus garrawayiback to top Coding sequence (CDS) from alignment at hap1-C.garr_04:22478787..22479643- >hap1-g10687.t2_Cgarrawayi-UQ_v1 ID=hap1-g10687.t2_Cgarrawayi-UQ_v1; Name=hap1-g10687.t2; organism=Citrus garrawayi; type=CDS; length=582bp; location=Sequence derived from: hap1-C.garr_04:22478787..22479643- (Citrus garrawayiback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|