hap1-g1971.t3
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of hap1-g1971.t3 vs. ExPASy TrEMBL (2024)
Match: tr|V4SG46|V4SG46_CITCL (RGS domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10025207mg PE=4 SV=1) HSP 1 Score: 341.658 bits (875), Expect = 4.180e-114 Identity = 166/171 (97.08%), Postives = 167/171 (97.66%), Query Frame = 0 Query: 1 MSQDEVVSQTFRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKLVASGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGAKVKQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDDCNANFRARSLLE 171 MSQDEVVSQTFRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKLVASGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGAKVKQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDDCNANFR + E Sbjct: 1 MSQDEVVSQTFRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKLVASGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGAKVKQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDDCNANFRETNFKE 171
BLAST of hap1-g1971.t3 vs. ExPASy TrEMBL (2024)
Match: tr|V4RXE3|V4RXE3_CITCL (RGS domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10025207mg PE=4 SV=1) HSP 1 Score: 342.813 bits (878), Expect = 1.696e-113 Identity = 166/171 (97.08%), Postives = 167/171 (97.66%), Query Frame = 0 Query: 1 MSQDEVVSQTFRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKLVASGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGAKVKQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDDCNANFRARSLLE 171 MSQDEVVSQTFRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKLVASGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGAKVKQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDDCNANFR + E Sbjct: 1 MSQDEVVSQTFRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKLVASGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGAKVKQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDDCNANFRETNFKE 171
BLAST of hap1-g1971.t3 vs. ExPASy TrEMBL (2024)
Match: tr|V4SL20|V4SL20_CITCL (RGS domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10025207mg PE=4 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 8.197e-113 Identity = 166/171 (97.08%), Postives = 167/171 (97.66%), Query Frame = 0 Query: 1 MSQDEVVSQTFRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKLVASGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGAKVKQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDDCNANFRARSLLE 171 MSQDEVVSQTFRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKLVASGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGAKVKQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDDCNANFR + E Sbjct: 1 MSQDEVVSQTFRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKLVASGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGAKVKQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDDCNANFRETNFKE 171
BLAST of hap1-g1971.t3 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2H5NFR6|A0A2H5NFR6_CITUN (RGS domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_038980 PE=4 SV=1) HSP 1 Score: 342.428 bits (877), Expect = 2.444e-112 Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0 Query: 1 MSQDEVVSQTFRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKLVASGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGAKVKQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDDCNANFR 165 MSQDEVVSQTFRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKLVASGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGAKVKQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDDCNANFR Sbjct: 1 MSQDEVVSQTFRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKLVASGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGAKVKQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDDCNANFR 165
BLAST of hap1-g1971.t3 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5C7HTJ3|A0A5C7HTJ3_9ROSI (RGS domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_014718 PE=4 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 4.490e-96 Identity = 143/171 (83.63%), Postives = 151/171 (88.30%), Query Frame = 0 Query: 1 MSQDEVVSQTFRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKLVASGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGAKVKQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDDCNANFRARSLLE 171 MSQ +VVSQTFRAL+ESADRKF RVRDLPL+G+RSQN H F KVFKAYMRLWKYQQENR KLV SGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSR+YFEG KVK LGVRFKELRFYARFLLVSLI NRT+M+ LVDRF LVDDC NFR + E Sbjct: 1 MSQSDVVSQTFRALVESADRKFGRVRDLPLHGNRSQNHHSFHKVFKAYMRLWKYQQENRTKLVESGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRRYFEGVKVKDLGVRFKELRFYARFLLVSLIFNRTDMLNLLVDRFTHLVDDCKTNFRETNFRE 171
BLAST of hap1-g1971.t3 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA39T717|A0AA39T717_ACESA (Histone H2A/H2B/H3 domain-containing protein OS=Acer saccharum OX=4024 GN=LWI29_003888 PE=3 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 5.165e-95 Identity = 144/171 (84.21%), Postives = 152/171 (88.89%), Query Frame = 0 Query: 1 MSQDEVVSQTFRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKLVASGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGAKVKQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDDCNANFRARSLLE 171 MSQ +VVSQTFRAL+ESADRKF RVRDLPL+ +RSQN H F KVFKAYMRLWKYQQENRAKLV SGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSR+YFEGAKVK LGVRFKELRFYARFLLVSLI NRT+M+ LVDRF LVDDC NFR + E Sbjct: 1 MSQSDVVSQTFRALVESADRKFGRVRDLPLHSNRSQNHHSFHKVFKAYMRLWKYQQENRAKLVESGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRRYFEGAKVKDLGVRFKELRFYARFLLVSLIFNRTDMLNLLVDRFTHLVDDCKTNFRETNFRE 171
BLAST of hap1-g1971.t3 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6P6GDT3|A0A6P6GDT3_ZIZJJ (Protein SCAI-like OS=Ziziphus jujuba OX=326968 GN=LOC112492569 PE=4 SV=1) HSP 1 Score: 273.863 bits (699), Expect = 2.133e-91 Identity = 138/169 (81.66%), Postives = 147/169 (86.98%), Query Frame = 0 Query: 1 MSQDEVVSQTFRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKLVASGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGAK--VKQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDDCNANFRAR 167 MS ++VVS+TFRAL+ESADRKFARVRD+P YG R QNQHYF KVFKAYMRLWKYQQENR KLV SGLNRWEIGEIASRIGQLYF QYMRTSEARF+VEAYVFYEAIL R+YFEG K K GVRFKELRFYARFLLVSLILNRTEMVK L DRF+ LVDD NFR + Sbjct: 1 MSDNDVVSRTFRALVESADRKFARVRDVPAYG-RVQNQHYFHKVFKAYMRLWKYQQENRGKLVESGLNRWEIGEIASRIGQLYFGQYMRTSEARFLVEAYVFYEAILYRRYFEGFKGPGKDAGVRFKELRFYARFLLVSLILNRTEMVKLLADRFKSLVDDSKVNFRGK 168
BLAST of hap1-g1971.t3 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2C9URI5|A0A2C9URI5_MANES (RGS domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_13G096500 PE=4 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 5.691e-91 Identity = 140/170 (82.35%), Postives = 151/170 (88.82%), Query Frame = 0 Query: 2 SQDEVVSQTFRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKLVASGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGAKVKQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDDCNANFRARSLLE 171 +Q VVSQTFRAL+ESADRKFARVRDLP YGH +QN HYFQKVFKAYMRLWKYQQENR+KLV +GL RWEIGEIASRIGQLYFNQYMRTS++RF+VEAYVFYEAIL RKYFEGAK K LGVRFKELRFYARFLLVSLIL RTEMV+ LVDRFR LVDD +NFR + E Sbjct: 3 AQSNVVSQTFRALVESADRKFARVRDLPSYGH-AQN-HYFQKVFKAYMRLWKYQQENRSKLVEAGLKRWEIGEIASRIGQLYFNQYMRTSDSRFLVEAYVFYEAILHRKYFEGAKAKDLGVRFKELRFYARFLLVSLILKRTEMVQSLVDRFRTLVDDSKSNFRETNFKE 170
BLAST of hap1-g1971.t3 vs. ExPASy TrEMBL (2024)
Match: tr|A0A067K0K9|A0A067K0K9_JATCU (RGS domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_18661 PE=4 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 6.128e-91 Identity = 141/171 (82.46%), Postives = 154/171 (90.06%), Query Frame = 0 Query: 1 MSQDEVVSQTFRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKLVASGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGAKVKQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDDCNANFRARSLLE 171 ++Q +VVSQTFRAL+E+ADRKFARVRDLP YGH SQN HYFQKVFKAYMRLWKYQQENR+KLV +GLNRWEIGEIASRIGQLYFNQYMRTS+ARF+VEAYVFYEAIL R+YFEGAK K LGVRFKELRFYARFLLVSLILNRTEMV+ LVD+FR LVDD NFR + E Sbjct: 5 VAQSDVVSQTFRALVENADRKFARVRDLPPYGH-SQN-HYFQKVFKAYMRLWKYQQENRSKLVEAGLNRWEIGEIASRIGQLYFNQYMRTSQARFLVEAYVFYEAILHRRYFEGAKTKDLGVRFKELRFYARFLLVSLILNRTEMVQLLVDKFRALVDDSKLNFRETNFKE 173
BLAST of hap1-g1971.t3 vs. ExPASy TrEMBL (2024)
Match: tr|B9T094|B9T094_RICCO (Signal transducer, putative OS=Ricinus communis OX=3988 GN=RCOM_0767210 PE=4 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 9.116e-91 Identity = 138/167 (82.63%), Postives = 150/167 (89.82%), Query Frame = 0 Query: 3 QDEVVSQTFRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKLVASGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGA--KVKQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDDCNANFRAR 167 Q++VV+QTFRALIESADRKFARVRDLP YG QN HYFQKVFKAYMRLWKYQQENR+KLV SGLNRWEIGEIASRIGQLYFNQYMRTSEARF+VEAYVFYEAIL+R+YFEG K K +GVRFKELRFYARFLLVSLILNR +MV LVDRFR LVDDC +NF+ + Sbjct: 4 QNDVVTQTFRALIESADRKFARVRDLPSYGRTPQN-HYFQKVFKAYMRLWKYQQENRSKLVDSGLNRWEIGEIASRIGQLYFNQYMRTSEARFLVEAYVFYEAILNRRYFEGGANKAKDIGVRFKELRFYARFLLVSLILNRIDMVLLLVDRFRSLVDDCKSNFKVK 169
BLAST of hap1-g1971.t3 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q54YY1|SCAI_DICDI (Protein SCAI homolog OS=Dictyostelium discoideum OX=44689 GN=scai PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 2.324e-34 Identity = 69/157 (43.95%), Postives = 104/157 (66.24%), Query Frame = 0 Query: 7 VSQTFRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKL---VASGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGAKV-KQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDD 159 + +TF L+ + R F +RDLP +G Q Q +FQK F+ Y +LWK+QQ+ R+ L GL R EIGEIAS+IGQLY++ Y+RTS+ ++ E+Y+FYEAI R YF+ + K + K+LR+YARF++V L+LN+ ++V L++ V+D Sbjct: 61 IIKTFEHLLRKSQRLFIGLRDLPQFGR--QWQPFFQKTFELYTKLWKFQQQYRSILEDKSKYGLKRCEIGEIASKIGQLYYHYYLRTSDTNYLNESYIFYEAIRLRSYFKDVSLDKTPDMMVKQLRYYARFIVVCLLLNKKKVVFDLIEELLKHVND 215
BLAST of hap1-g1971.t3 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8N9R8|SCAI_HUMAN (Protein SCAI OS=Homo sapiens OX=9606 GN=SCAI PE=1 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 4.434e-34 Identity = 70/163 (42.94%), Postives = 103/163 (63.19%), Query Frame = 0 Query: 11 FRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKLVAS-GLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGA-KVKQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDDCNANFRARSLLE 171 F L++ + + F +RDLP YG + Q Q YF + F Y +LWK+QQ++R L GL RW+IGEIAS+IGQLY++ Y+RTSE ++ EA+ FY AI R Y+ K + + K+LR+YARF++V L+LN+ ++VK LV D ++D F +E Sbjct: 62 FCYLLDKSKQLFNGLRDLPQYGQK-QWQSYFGRTFDVYTKLWKFQQQHRQVLDNRYGLKRWQIGEIASKIGQLYYHYYLRTSETSYLNEAFSFYSAIRQRSYYSQVNKEDRPELVVKKLRYYARFIVVCLLLNKMDVVKDLVKELSDEIEDYTHRFNTEDQVE 223
BLAST of hap1-g1971.t3 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8C8N2|SCAI_MOUSE (Protein SCAI OS=Mus musculus OX=10090 GN=Scai PE=1 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 4.479e-34 Identity = 70/163 (42.94%), Postives = 103/163 (63.19%), Query Frame = 0 Query: 11 FRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKLVAS-GLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGA-KVKQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDDCNANFRARSLLE 171 F L++ + + F +RDLP YG + Q Q YF + F Y +LWK+QQ++R L GL RW+IGEIAS+IGQLY++ Y+RTSE ++ EA+ FY AI R Y+ K + + K+LR+YARF++V L+LN+ ++VK LV D ++D F +E Sbjct: 62 FCYLLDKSKQLFNGLRDLPQYGQK-QWQSYFGRTFDVYTKLWKFQQQHRQVLDNRYGLKRWQIGEIASKIGQLYYHYYLRTSETSYLNEAFSFYSAIRQRSYYSQVNKEDRPELVVKKLRYYARFIVVCLLLNKMDVVKDLVKELSDEIEDYTHRFNTEDQVE 223
BLAST of hap1-g1971.t3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:18561802-18563727 REVERSE LENGTH=458) HSP 1 Score: 235.343 bits (599), Expect = 3.653e-76 Identity = 118/167 (70.66%), Postives = 139/167 (83.23%), Query Frame = 0 Query: 5 EVVSQTFRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKLVASGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGAKVKQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDDCNANFRARSLLE 171 E VS FRAL+E+ADRKFARVRDLP +G R+Q+ HYFQKVFKAYM+LW YQQ +R+KLV SGLNRWEIGEIASRIGQLYF+QYMRTSEARF++EA+VFYEAIL R YF+ A+ K LG RFKELRFYARFLLVSLI++R +M+ L D+ R LVD +NFR + E Sbjct: 4 EDVSSNFRALVENADRKFARVRDLPAFG-RAQS-HYFQKVFKAYMKLWNYQQSHRSKLVESGLNRWEIGEIASRIGQLYFSQYMRTSEARFLLEAFVFYEAILKRSYFDEAQGKDLGARFKELRFYARFLLVSLIVDRKQMLLHLADKLRLLVDHSISNFRETNFKE 168
BLAST of hap1-g1971.t3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:18561206-18563727 REVERSE LENGTH=599) HSP 1 Score: 236.884 bits (603), Expect = 2.678e-75 Identity = 117/161 (72.67%), Postives = 137/161 (85.09%), Query Frame = 0 Query: 5 EVVSQTFRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKLVASGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGAKVKQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDDCNANFR 165 E VS FRAL+E+ADRKFARVRDLP +G R+Q+ HYFQKVFKAYM+LW YQQ +R+KLV SGLNRWEIGEIASRIGQLYF+QYMRTSEARF++EA+VFYEAIL R YF+ A+ K LG RFKELRFYARFLLVSLI++R +M+ L D+ R LVD +NFR Sbjct: 4 EDVSSNFRALVENADRKFARVRDLPAFG-RAQS-HYFQKVFKAYMKLWNYQQSHRSKLVESGLNRWEIGEIASRIGQLYFSQYMRTSEARFLLEAFVFYEAILKRSYFDEAQGKDLGARFKELRFYARFLLVSLIVDRKQMLLHLADKLRLLVDHSISNFR 162
BLAST of hap1-g1971.t3 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:857013-860105 FORWARD LENGTH=607) HSP 1 Score: 191.43 bits (485), Expect = 7.058e-58 Identity = 89/159 (55.97%), Postives = 122/159 (76.73%), Query Frame = 0 Query: 7 VSQTFRALIESADRKFARVRDLPLYGHRSQNQHYFQKVFKAYMRLWKYQQENRAKLVASGLNRWEIGEIASRIGQLYFNQYMRTSEARFIVEAYVFYEAILSRKYFEGAKVKQLGVRFKELRFYARFLLVSLILNRTEMVKFLVDRFRDLVDDCNANFR 165 +S+ + +L+ AD+KF+++RDLP Y RS+ ++YF KVFK Y +LWK+QQENR KLV +GL RWEIGEIASRI QLY+ YMRTS+A ++ E+YVFYEAIL+R+YF+ + L + K+LRF ARFL+V L+L R EMV LVD+F+ L+D+C F+ Sbjct: 13 LSEVYWSLVNKADKKFSKIRDLPFY-ERSRYENYFFKVFKVYTQLWKFQQENRQKLVEAGLKRWEIGEIASRIAQLYYGHYMRTSDAGYLSESYVFYEAILTREYFKDGLFQDLNIANKQLRFLARFLMVCLVLGRREMVHQLVDQFKRLIDECKRTFQ 170 The following BLAST results are available for this feature:
BLAST of hap1-g1971.t3 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of hap1-g1971.t3 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs UniProt Swissprot) Total hits: 3 Position : 0 Zoom : x 1
BLAST of hap1-g1971.t3 vs. Araport11
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs Araport11) Total hits: 3 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus garrawayi UQ v1.0 proteins
Date Performed: 2024-10-02 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >hap1-g1971.t3_Cgarrawayi-UQ_v1 ID=hap1-g1971.t3_Cgarrawayi-UQ_v1; Name=hap1-g1971.t3; organism=Citrus garrawayi; type=mRNA; length=546bpback to top protein sequence of hap1-g1971.t3_Cgarrawayi-UQ_v1 >hap1-g1971.t3_Cgarrawayi-UQ_v1 ID=hap1-g1971.t3_Cgarrawayi-UQ_v1; Name=hap1-g1971.t3_Cgarrawayi-UQ_v1; organism=Citrus garrawayi; type=polypeptide; length=182bpback to top mRNA from alignment at hap1-C.garr_01:23511936..23513374- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=1439bp; location=Sequence derived from: hap1-C.garr_01:23511936..23513374- (Citrus garrawayiback to top Coding sequence (CDS) from alignment at hap1-C.garr_01:23511936..23513374- >hap1-g1971.t3_Cgarrawayi-UQ_v1 ID=hap1-g1971.t3_Cgarrawayi-UQ_v1; Name=hap1-g1971.t3; organism=Citrus garrawayi; type=CDS; length=546bp; location=Sequence derived from: hap1-C.garr_01:23511936..23513374- (Citrus garrawayiback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|