hap1-g6305.t2
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of hap1-g6305.t2 vs. ExPASy TrEMBL (2024)
Match: tr|V4TF73|V4TF73_CITCL (CTLH domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10002444mg PE=4 SV=1) HSP 1 Score: 432.565 bits (1111), Expect = 4.729e-153 Identity = 209/215 (97.21%), Postives = 212/215 (98.60%), Query Frame = 0 Query: 1 MDVDPRQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAMERLIQQTTAVRQCLSQELGKDVHPPFSLKDFMKS 215
MDVDPRQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKR LHFALEGNALKAIELT+ELAQDLL KN+DLHFDLLSLHFVELVCSRKCTEALEFAQT+LT FGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAMERLIQQTTAVRQCLSQELGKDVHPPFSLKDFMKS
Sbjct: 1 MDVDPRQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQTKLTPFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAMERLIQQTTAVRQCLSQELGKDVHPPFSLKDFMKS 215
BLAST of hap1-g6305.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A067HAN7|A0A067HAN7_CITSI (CTLH domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g027999mg PE=4 SV=1) HSP 1 Score: 432.565 bits (1111), Expect = 4.729e-153 Identity = 209/215 (97.21%), Postives = 212/215 (98.60%), Query Frame = 0 Query: 1 MDVDPRQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAMERLIQQTTAVRQCLSQELGKDVHPPFSLKDFMKS 215
MDVDPRQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKR LHFALEGNALKAIELT+ELAQDLL KN+DLHFDLLSLHFVELVCSRKCTEALEFAQT+LT FGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAMERLIQQTTAVRQCLSQELGKDVHPPFSLKDFMKS
Sbjct: 1 MDVDPRQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQTKLTPFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAMERLIQQTTAVRQCLSQELGKDVHPPFSLKDFMKS 215
BLAST of hap1-g6305.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2H5NSA5|A0A2H5NSA5_CITUN (CTLH domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_071260 PE=4 SV=1) HSP 1 Score: 421.009 bits (1081), Expect = 1.611e-148 Identity = 206/215 (95.81%), Postives = 209/215 (97.21%), Query Frame = 0 Query: 1 MDVDPRQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAMERLIQQTTAVRQCLSQELGKDVHPPFSLKDFMKS 215
MDVDPRQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKR LHFALEGNALKAIELT+ELAQDLL KN+DLHFDLLSLHFVELVCSRKCTEALEFAQT+LT FGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAIL ERPRYAAMERLIQQTTAVRQCLSQELGKDVHPPFSLKDFMKS
Sbjct: 1 MDVDPRQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQTKLTPFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAIL---ERPRYAAMERLIQQTTAVRQCLSQELGKDVHPPFSLKDFMKS 212
BLAST of hap1-g6305.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A067HAA6|A0A067HAA6_CITSI (CTLH domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g027999mg PE=4 SV=1) HSP 1 Score: 421.009 bits (1081), Expect = 1.611e-148 Identity = 206/215 (95.81%), Postives = 209/215 (97.21%), Query Frame = 0 Query: 1 MDVDPRQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAMERLIQQTTAVRQCLSQELGKDVHPPFSLKDFMKS 215
MDVDPRQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKR LHFALEGNALKAIELT+ELAQDLL KN+DLHFDLLSLHFVELVCSRKCTEALEFAQT+LT FGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAIL ERPRYAAMERLIQQTTAVRQCLSQELGKDVHPPFSLKDFMKS
Sbjct: 1 MDVDPRQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQTKLTPFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAIL---ERPRYAAMERLIQQTTAVRQCLSQELGKDVHPPFSLKDFMKS 212
BLAST of hap1-g6305.t2 vs. ExPASy TrEMBL (2024)
Match: tr|V4T9Z0|V4T9Z0_CITCL (CTLH domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10002444mg PE=4 SV=1) HSP 1 Score: 408.683 bits (1049), Expect = 1.112e-143 Identity = 198/205 (96.59%), Postives = 202/205 (98.54%), Query Frame = 0 Query: 11 IAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAMERLIQQTTAVRQCLSQELGKDVHPPFSLKDFMKS 215
+AINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKR LHFALEGNALKAIELT+ELAQDLL KN+DLHFDLLSLHFVELVCSRKCTEALEFAQT+LT FGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAMERLIQQTTAVRQCLSQELGKDVHPPFSLKDFMKS
Sbjct: 3 LAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRILHFALEGNALKAIELTEELAQDLLEKNKDLHFDLLSLHFVELVCSRKCTEALEFAQTKLTPFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAMERLIQQTTAVRQCLSQELGKDVHPPFSLKDFMKS 207
BLAST of hap1-g6305.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A7J7HUK8|A0A7J7HUK8_CAMSI (CTLH domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_008612 PE=4 SV=1) HSP 1 Score: 373.244 bits (957), Expect = 1.651e-129 Identity = 180/215 (83.72%), Postives = 197/215 (91.63%), Query Frame = 0 Query: 1 MDVDPRQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAMERLIQQTTAVRQCLSQELGKDVHPPFSLKDFMKS 215
MDVDPRQYE+I +NDNDIHNIVLSYLVHNCYKETV+SFI+CTGMKQP N LEDME RKR +FAL+GNALKAIELT++ A DLL KN+DLHFDLLSLHFVELVCSRKCTEALEFAQT+LT FGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSL+YRQHVAD+LNRAILA+A P Y+AMERLIQQTT VRQCL+QE GKD PFS+KDF+KS
Sbjct: 1 MDVDPRQYENIVVNDNDIHNIVLSYLVHNCYKETVESFIACTGMKQPTNHLEDMEKRKRIFNFALDGNALKAIELTEQFAPDLLDKNQDLHFDLLSLHFVELVCSRKCTEALEFAQTKLTPFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLDYRQHVADSLNRAILANANLPGYSAMERLIQQTTVVRQCLNQETGKDGLLPFSVKDFLKS 215
BLAST of hap1-g6305.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A251J3Z4|A0A251J3Z4_MANES (CTLH domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_18G019300 PE=4 SV=1) HSP 1 Score: 372.859 bits (956), Expect = 2.617e-129 Identity = 177/215 (82.33%), Postives = 194/215 (90.23%), Query Frame = 0 Query: 1 MDVDPRQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAMERLIQQTTAVRQCLSQELGKDVHPPFSLKDFMKS 215
MDVDPR YE IAI DN+IHN+VLSYLVHNCYKETV+SFI+CTGMKQPA+CLEDM+ RKR H+ALEGNALKAIELT+ELA DLL N+DLHF LLSLHF+ELVC+RKCTEALEFAQ++LT FGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQ V D+LNRAILAHA RP YAAMERLIQQ T VRQCL+Q+ GKD PPFSLKDF+K
Sbjct: 1 MDVDPRHYEQIAIKDNEIHNVVLSYLVHNCYKETVESFIACTGMKQPADCLEDMDKRKRIFHYALEGNALKAIELTEELAHDLLENNKDLHFGLLSLHFIELVCTRKCTEALEFAQSKLTPFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQQVVDSLNRAILAHANRPSYAAMERLIQQATVVRQCLNQDHGKDGFPPFSLKDFLKG 215
BLAST of hap1-g6305.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5B7CF00|A0A5B7CF00_DAVIN (CTLH domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_047424 PE=4 SV=1) HSP 1 Score: 372.089 bits (954), Expect = 4.381e-129 Identity = 181/215 (84.19%), Postives = 196/215 (91.16%), Query Frame = 0 Query: 1 MDVDPRQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAMERLIQQTTAVRQCLSQELGKDVHPPFSLKDFMKS 215
MDVDPRQYE+IAI DNDIHNIVLSYLVHNCYKETVDSF++CTGMKQ + LEDME R+R HFALEGNALKAIELT++LA DLL KN+DLHFDLLSLHFVELVCSRKCTEALEFAQT+LT FGKVQ+YVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVAD+LNRAILA A P Y+A+ERLIQQTT VRQCL+QELGKD FSLKDF+KS
Sbjct: 1 MDVDPRQYENIAIKDNDIHNIVLSYLVHNCYKETVDSFVACTGMKQSVDHLEDMEKRQRIFHFALEGNALKAIELTEQLAPDLLDKNKDLHFDLLSLHFVELVCSRKCTEALEFAQTKLTPFGKVQRYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADSLNRAILAQANLPSYSAVERLIQQTTVVRQCLNQELGKDGLTQFSLKDFLKS 215
BLAST of hap1-g6305.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5J5AEM4|A0A5J5AEM4_9ASTE (CTLH domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_036049 PE=4 SV=1) HSP 1 Score: 370.933 bits (951), Expect = 1.163e-128 Identity = 182/215 (84.65%), Postives = 197/215 (91.63%), Query Frame = 0 Query: 1 MDVDPRQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAMERLIQQTTAVRQCLSQELGKDVHPPFSLKDFMKS 215
MDVDPRQYE+IAI DNDI+NIVLSYLVHNCYKETV+SF++CTGMKQPA+ LEDME RKR HFALEGNA KAIELT+ LA DLL KN+DLHFDLLSLHFVELVCSRKCTEALEFAQT+L+ FGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVAD+LNRAILAHA P Y+A+ERLIQQTT VRQCL+QELGKD FSLKDF+KS
Sbjct: 1 MDVDPRQYENIAIKDNDINNIVLSYLVHNCYKETVESFVTCTGMKQPADHLEDMEKRKRIFHFALEGNAPKAIELTEHLAPDLLDKNKDLHFDLLSLHFVELVCSRKCTEALEFAQTKLSPFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADSLNRAILAHANLPGYSAVERLIQQTTVVRQCLNQELGKDGLQQFSLKDFLKS 215
BLAST of hap1-g6305.t2 vs. ExPASy TrEMBL (2024)
Match: tr|E0CPF7|E0CPF7_VITVI (CTLH domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g13280 PE=4 SV=1) HSP 1 Score: 370.163 bits (949), Expect = 2.294e-128 Identity = 180/215 (83.72%), Postives = 195/215 (90.70%), Query Frame = 0 Query: 1 MDVDPRQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAMERLIQQTTAVRQCLSQELGKDVHPPFSLKDFMKS 215
MDVDPRQYE+ AIND+DIHNIVLSYLVHNC+KETV+SFISCTGMKQPA+ EDME RKR HFALEGNALKAIELT++LA DLL KN+DLHFDLLSLHFV+LVCSRKCTEALEFAQT+LT FGKVQ YVEKLEDFM LLAYEEPEKSPMFHLLSLEYRQ VAD+LNRA+LAHA P +AMERLIQQTT VRQCL+QEL KD PPFSLKDF+KS
Sbjct: 1 MDVDPRQYENAAINDSDIHNIVLSYLVHNCFKETVESFISCTGMKQPADYQEDMEKRKRIFHFALEGNALKAIELTEQLADDLLEKNKDLHFDLLSLHFVKLVCSRKCTEALEFAQTKLTPFGKVQNYVEKLEDFMTLLAYEEPEKSPMFHLLSLEYRQQVADSLNRALLAHANLPSCSAMERLIQQTTVVRQCLNQELSKDPPPPFSLKDFLKS 215
BLAST of hap1-g6305.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|A7SWD3|GID8_NEMVE (Glucose-induced degradation protein 8 homolog OS=Nematostella vectensis OX=45351 GN=v1g247787 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.648e-22 Identity = 54/155 (34.84%), Postives = 88/155 (56.77%), Query Frame = 0 Query: 17 DIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGK-VQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAIL 170
+++ +++ YLV YKE + F +G QP L+ ++ R + +G+ +A+ +T +L D+L N+ L+F L +EL+ + A+EFAQ + + G+ +Y+E+LE MALLA++ PE+SP LL RQ VA LN AIL
Sbjct: 25 EMNRLIMDYLVTEGYKEAAEKFRIESGT-QPTAPLDSLDDRIKIREAVQKGDLEQAVSMTNKLNPDILDSNQQLYFHLQQQRLIELIREKDIEAAVEFAQGQFSEQGQESGRYLEELEQTMALLAFDNPEESPFGDLLHTSQRQKVASELNAAIL 178
BLAST of hap1-g6305.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q5ZKQ7|GID8_CHICK (Glucose-induced degradation protein 8 homolog OS=Gallus gallus OX=9031 GN=GID8 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.376e-21 Identity = 56/167 (33.53%), Postives = 96/167 (57.49%), Query Frame = 0 Query: 10 HIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKVQKY-VEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAER 175
++ I D++ ++++YLV +KE + F +G+ +P+ LE ++ R + L+G +AI L L +LL N L+F L H +EL+ R+ ALEFAQT+L G+ + + ++E +ALLA++ PE+SP LL++ RQ V +N+A+L + R
Sbjct: 21 NLHIQRADMNRLIMNYLVTEGFKEAAEKFRMESGI-EPSVDLETLDERIKIREMILKGQIQEAISLINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQLAEQGEESRECLTEMERTLALLAFDNPEESPFGDLLNMMQRQKVWSEVNQAVLDYENR 186
BLAST of hap1-g6305.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q32L52|GID8_BOVIN (Glucose-induced degradation protein 8 homolog OS=Bos taurus OX=9913 GN=GID8 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.687e-21 Identity = 55/160 (34.38%), Postives = 92/160 (57.50%), Query Frame = 0 Query: 17 DIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKVQKY-VEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAER 175
D++ ++++YLV +KE + F +G+ +P+ LE ++ R + L+G +AI L L +LL N L+F L H +EL+ R+ ALEFAQT+L G+ + + ++E +ALLA++ PE SP LL++ RQ V +N+A+L + R
Sbjct: 28 DMNRLIMNYLVTEGFKEAAEKFRMESGI-EPSVDLETLDERIKIREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQLAEQGEESRECLTEMERTLALLAFDNPEDSPFGDLLNMMQRQKVWSEVNQAVLDYENR 186
BLAST of hap1-g6305.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|E7FGY2|GID8B_DANRE (Glucose-induced degradation protein 8-B homolog OS=Danio rerio OX=7955 GN=gid8b PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 4.494e-21 Identity = 55/167 (32.93%), Postives = 96/167 (57.49%), Query Frame = 0 Query: 10 HIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKVQKY-VEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAER 175
++ I D++ ++++YLV +KE + F +G+ +P+ L+ ++ R + L+G +AI L L +LL N L+F L H +EL+ R+ ALEFAQT+L G+ + + ++E +ALLA++ PE+SP LL++ RQ V +N+A+L + R
Sbjct: 22 NVHIQRADMNRLIMNYLVTEGFKEAAEKFRMESGI-EPSVDLDSLDERIKIREMVLKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRLRETEAALEFAQTQLAEQGEESRECLTEMERTLALLAFDNPEESPFGDLLNMMQRQKVWSEVNQAVLDYENR 187
BLAST of hap1-g6305.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9D7M1|GID8_MOUSE (Glucose-induced degradation protein 8 homolog OS=Mus musculus OX=10090 GN=Gid8 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.209e-21 Identity = 55/160 (34.38%), Postives = 92/160 (57.50%), Query Frame = 0 Query: 17 DIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKVQKY-VEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAER 175
D++ ++++YLV +KE + F +G+ +P+ LE ++ R + L+G +AI L L +LL N L+F L H +EL+ R+ ALEFAQT+L G+ + + ++E +ALLA++ PE+SP LL + RQ V +N+A+L + R
Sbjct: 28 DMNRLIMNYLVTEGFKEAAEKFRMESGI-EPSVDLETLDERIKIREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQLAEQGEESRECLTEMERTLALLAFDSPEESPFGDLLHMMQRQKVWSEVNQAVLDYENR 186
BLAST of hap1-g6305.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9NWU2|GID8_HUMAN (Glucose-induced degradation protein 8 homolog OS=Homo sapiens OX=9606 GN=GID8 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.596e-20 Identity = 55/160 (34.38%), Postives = 91/160 (56.88%), Query Frame = 0 Query: 17 DIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKVQKY-VEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAER 175
D++ ++++YLV +KE + F +G+ +P+ LE ++ R + L+G +AI L L +LL N L+F L H +EL+ R+ ALEFAQT+L G+ + + ++E +ALLA++ PE+SP LL RQ V +N+A+L + R
Sbjct: 28 DMNRLIMNYLVTEGFKEAAEKFRMESGI-EPSVDLETLDERIKIREMILKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRQRETEAALEFAQTQLAEQGEESRECLTEMERTLALLAFDSPEESPFGDLLHTMQRQKVWSEVNQAVLDYENR 186
BLAST of hap1-g6305.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q6PC55|GID8A_DANRE (Glucose-induced degradation protein 8-A homolog OS=Danio rerio OX=7955 GN=gid8a PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.200e-20 Identity = 54/167 (32.34%), Postives = 95/167 (56.89%), Query Frame = 0 Query: 10 HIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKVQKY-VEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAER 175
++ I D++ ++++YLV +KE + F +G+ +P L+ ++ R + L+G +AI L L +LL N L+F L H +EL+ R+ ALEFAQ++L G+ + + ++E +ALLA++ PE+SP LL++ RQ V +N+A+L + R
Sbjct: 21 NVHIQRADMNRLIMNYLVTEGFKEAAEKFRMESGI-EPNVDLDSLDERIKIREMVLKGQIQEAIALINSLHPELLDTNRYLYFHLQQQHLIELIRLRETEAALEFAQSQLAEQGEESRECLTEMERTLALLAFDNPEESPFGDLLNMMQRQKVWSEVNQAVLDYENR 186
BLAST of hap1-g6305.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q84WK5|GID8_ARATH (Protein GID8 homolog OS=Arabidopsis thaliana OX=3702 GN=GID8 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 4.457e-16 Identity = 55/184 (29.89%), Postives = 93/184 (50.54%), Query Frame = 0 Query: 6 RQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKV-QKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAIL---AHAERPRYAAMERLI 185
++ + + D++ +V+++LV Y E + F +G K P L + R GN AIE +L ++L N +L F L +EL+ K EALEFAQ EL G+ Q ++E+LE +ALL +++ P+ LL L +R A +N AIL +H + P+ ++ +++
Sbjct: 32 KKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTK-PEIDLATITDRMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILTSQSHEKDPKLPSLLKML 214
BLAST of hap1-g6305.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q54X16|GID8_DICDI (Glucose-induced degradation protein 8 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0279265 PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 8.065e-16 Identity = 59/196 (30.10%), Postives = 102/196 (52.04%), Query Frame = 0 Query: 10 HIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQP---ANCLEDMEMRKRTLHFALE-GNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGK-VQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAIL---AHAERPRYAAMERLIQ--QTTAVRQCL 195
+ I+ +D++ +V++YLV Y+E F + + A+ + M +R A++ G+ K IE+ +L ++L N L+F L +EL+ EAL+FAQ EL G+ K++E+LE ++LL +E+ KSP+ LL RQ A LN AIL + + P+ + +L++ QT +C+
Sbjct: 25 EVNISKSDLNKLVMNYLVIEGYQEAAAKFQEESSTQTTVDLASIADRMAIRS-----AIQCGDVEKGIEIVNDLNPEILDTNPQLYFHLQQQKLIELIRKGMTAEALKFAQDELAPQGEENNKFLEELEKTISLLVFEDTAKSPLSSLLDHSQRQKTAGELNSAILLSQSQDKDPKLPTILKLLKWAQTQLDSKCI 215
BLAST of hap1-g6305.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|F4HYD7|RANBM_ARATH (Ran-binding protein M homolog OS=Arabidopsis thaliana OX=3702 GN=RANBPM PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 9.327e-13 Identity = 55/176 (31.25%), Postives = 88/176 (50.00%), Query Frame = 0 Query: 9 EHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPA------NCLED------MEMRKRTLHFALEGNALKAI-ELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILA 171
E I+I N + +V +YL+H Y+ET+D+F T P N +++ ++ RK G A+ EL K Q + + F L F+ELV K E + + + EL +F + + + +ED ALLAYE+PE+S +++ L R+ VAD +N AIL+
Sbjct: 239 EKISIPPNIGYGLVKTYLLHYGYEETLDAFNLATKNTVPPIHIDQENAIDEDDSSYALKQRKNLRQLVRNGEIDTALAELQKLYPQIVQDDKSVVCFLLHCQKFIELVRVGKLEEGVNYGRLELAKFVGLTGFQDIVEDCFALLAYEKPEESSVWYFLEDSQRELVADAVNAAILS 414
BLAST of hap1-g6305.t2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:1833071-1834516 FORWARD LENGTH=213) HSP 1 Score: 300.056 bits (767), Expect = 3.194e-104 Identity = 144/214 (67.29%), Postives = 169/214 (78.97%), Query Frame = 0 Query: 3 VDPRQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAMERLIQQTTAVRQCLSQELGKDVHPPFSLKDFMKS* 216
+DPRQ+EH + DNDIH+IV+SYL+HNC+ ET DS S TG+KQPA ++ME RK+ +HF LE ALKA ELT++LAQDLL KN+DL FDLL LHFVEL+C+ CTEAL+F +T L FGKV+KYVEKLED MALLAYE+PEKSPMFHLLS EYRQ VADNLNR IL H P Y MER+IQQ T VRQ L++E GKD PPFSLKD +K *
Sbjct: 1 MDPRQFEHTVVADNDIHSIVMSYLLHNCFNETADSLASSTGVKQPAIDRDNMERRKQIIHFILERKALKAFELTEQLAQDLLEKNKDLQFDLLCLHFVELICAGNCTEALKFGKTRLAPFGKVKKYVEKLEDVMALLAYEDPEKSPMFHLLSSEYRQQVADNLNRTILEHTNHPSYTPMERIIQQVTVVRQYLTEENGKDAFPPFSLKDSLKG* 214
BLAST of hap1-g6305.t2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:1833071-1834405 FORWARD LENGTH=211) HSP 1 Score: 280.026 bits (715), Expect = 2.489e-96 Identity = 134/199 (67.34%), Postives = 158/199 (79.40%), Query Frame = 0 Query: 3 VDPRQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKVQKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAILAHAERPRYAAMERLIQQTTAVRQCLSQELGK 201
+DPRQ+EH + DNDIH+IV+SYL+HNC+ ET DS S TG+KQPA ++ME RK+ +HF LE ALKA ELT++LAQDLL KN+DL FDLL LHFVEL+C+ CTEAL+F +T L FGKV+KYVEKLED MALLAYE+PEKSPMFHLLS EYRQ VADNLNR IL H P Y MER+IQQ T VRQ L++E GK
Sbjct: 1 MDPRQFEHTVVADNDIHSIVMSYLLHNCFNETADSLASSTGVKQPAIDRDNMERRKQIIHFILERKALKAFELTEQLAQDLLEKNKDLQFDLLCLHFVELICAGNCTEALKFGKTRLAPFGKVKKYVEKLEDVMALLAYEDPEKSPMFHLLSSEYRQQVADNLNRTILEHTNHPSYTPMERIIQQVTVVRQYLTEENGK 199
BLAST of hap1-g6305.t2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:22543122-22544355 FORWARD LENGTH=220) HSP 1 Score: 77.411 bits (189), Expect = 3.312e-17 Identity = 55/184 (29.89%), Postives = 93/184 (50.54%), Query Frame = 0 Query: 6 RQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKV-QKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAIL---AHAERPRYAAMERLI 185
++ + + D++ +V+++LV Y E + F +G K P L + R GN AIE +L ++L N +L F L +EL+ K EALEFAQ EL G+ Q ++E+LE +ALL +++ P+ LL L +R A +N AIL +H + P+ ++ +++
Sbjct: 9 KKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTK-PEIDLATITDRMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILTSQSHEKDPKLPSLLKML 191
BLAST of hap1-g6305.t2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:22542979-22544355 FORWARD LENGTH=226) HSP 1 Score: 77.411 bits (189), Expect = 3.631e-17 Identity = 55/184 (29.89%), Postives = 93/184 (50.54%), Query Frame = 0 Query: 6 RQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKV-QKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAIL---AHAERPRYAAMERLI 185
++ + + D++ +V+++LV Y E + F +G K P L + R GN AIE +L ++L N +L F L +EL+ K EALEFAQ EL G+ Q ++E+LE +ALL +++ P+ LL L +R A +N AIL +H + P+ ++ +++
Sbjct: 15 KKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTK-PEIDLATITDRMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILTSQSHEKDPKLPSLLKML 197
BLAST of hap1-g6305.t2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:22542979-22544355 FORWARD LENGTH=226) HSP 1 Score: 77.411 bits (189), Expect = 3.631e-17 Identity = 55/184 (29.89%), Postives = 93/184 (50.54%), Query Frame = 0 Query: 6 RQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKV-QKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAIL---AHAERPRYAAMERLI 185
++ + + D++ +V+++LV Y E + F +G K P L + R GN AIE +L ++L N +L F L +EL+ K EALEFAQ EL G+ Q ++E+LE +ALL +++ P+ LL L +R A +N AIL +H + P+ ++ +++
Sbjct: 15 KKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTK-PEIDLATITDRMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILTSQSHEKDPKLPSLLKML 197
BLAST of hap1-g6305.t2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:22542979-22544355 FORWARD LENGTH=226) HSP 1 Score: 77.411 bits (189), Expect = 3.631e-17 Identity = 55/184 (29.89%), Postives = 93/184 (50.54%), Query Frame = 0 Query: 6 RQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKV-QKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAIL---AHAERPRYAAMERLI 185
++ + + D++ +V+++LV Y E + F +G K P L + R GN AIE +L ++L N +L F L +EL+ K EALEFAQ EL G+ Q ++E+LE +ALL +++ P+ LL L +R A +N AIL +H + P+ ++ +++
Sbjct: 15 KKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTK-PEIDLATITDRMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILTSQSHEKDPKLPSLLKML 197
BLAST of hap1-g6305.t2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:22542979-22544355 FORWARD LENGTH=226) HSP 1 Score: 77.411 bits (189), Expect = 3.631e-17 Identity = 55/184 (29.89%), Postives = 93/184 (50.54%), Query Frame = 0 Query: 6 RQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKV-QKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAIL---AHAERPRYAAMERLI 185
++ + + D++ +V+++LV Y E + F +G K P L + R GN AIE +L ++L N +L F L +EL+ K EALEFAQ EL G+ Q ++E+LE +ALL +++ P+ LL L +R A +N AIL +H + P+ ++ +++
Sbjct: 15 KKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTK-PEIDLATITDRMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILTSQSHEKDPKLPSLLKML 197
BLAST of hap1-g6305.t2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:22542979-22544355 FORWARD LENGTH=226) HSP 1 Score: 77.411 bits (189), Expect = 3.631e-17 Identity = 55/184 (29.89%), Postives = 93/184 (50.54%), Query Frame = 0 Query: 6 RQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKV-QKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAIL---AHAERPRYAAMERLI 185
++ + + D++ +V+++LV Y E + F +G K P L + R GN AIE +L ++L N +L F L +EL+ K EALEFAQ EL G+ Q ++E+LE +ALL +++ P+ LL L +R A +N AIL +H + P+ ++ +++
Sbjct: 15 KKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTK-PEIDLATITDRMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILTSQSHEKDPKLPSLLKML 197
BLAST of hap1-g6305.t2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:22542928-22544355 FORWARD LENGTH=243) HSP 1 Score: 77.411 bits (189), Expect = 4.575e-17 Identity = 55/184 (29.89%), Postives = 93/184 (50.54%), Query Frame = 0 Query: 6 RQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKV-QKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAIL---AHAERPRYAAMERLI 185
++ + + D++ +V+++LV Y E + F +G K P L + R GN AIE +L ++L N +L F L +EL+ K EALEFAQ EL G+ Q ++E+LE +ALL +++ P+ LL L +R A +N AIL +H + P+ ++ +++
Sbjct: 32 KKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTK-PEIDLATITDRMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILTSQSHEKDPKLPSLLKML 214
BLAST of hap1-g6305.t2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:22542928-22544355 FORWARD LENGTH=243) HSP 1 Score: 77.411 bits (189), Expect = 4.575e-17 Identity = 55/184 (29.89%), Postives = 93/184 (50.54%), Query Frame = 0 Query: 6 RQYEHIAINDNDIHNIVLSYLVHNCYKETVDSFISCTGMKQPANCLEDMEMRKRTLHFALEGNALKAIELTKELAQDLLVKNEDLHFDLLSLHFVELVCSRKCTEALEFAQTELTRFGKV-QKYVEKLEDFMALLAYEEPEKSPMFHLLSLEYRQHVADNLNRAIL---AHAERPRYAAMERLI 185
++ + + D++ +V+++LV Y E + F +G K P L + R GN AIE +L ++L N +L F L +EL+ K EALEFAQ EL G+ Q ++E+LE +ALL +++ P+ LL L +R A +N AIL +H + P+ ++ +++
Sbjct: 32 KKLNAVKLRKEDMNTLVMNFLVTEGYVEAAEKFQRESGTK-PEIDLATITDRMAVKKAVQNGNVEDAIEKVNDLNPEILDTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRGEENQAFLEELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILTSQSHEKDPKLPSLLKML 214 The following BLAST results are available for this feature:
BLAST of hap1-g6305.t2 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of hap1-g6305.t2 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of hap1-g6305.t2 vs. Araport11
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus garrawayi UQ v1.0 proteins
Date Performed: 2024-10-02 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >hap1-g6305.t2_Cgarrawayi-UQ_v1 ID=hap1-g6305.t2_Cgarrawayi-UQ_v1; Name=hap1-g6305.t2; organism=Citrus garrawayi; type=mRNA; length=648bpback to top protein sequence of hap1-g6305.t2_Cgarrawayi-UQ_v1 >hap1-g6305.t2_Cgarrawayi-UQ_v1 ID=hap1-g6305.t2_Cgarrawayi-UQ_v1; Name=hap1-g6305.t2_Cgarrawayi-UQ_v1; organism=Citrus garrawayi; type=polypeptide; length=216bpback to top mRNA from alignment at hap1-C.garr_03:1830169..1832446- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=2278bp; location=Sequence derived from: hap1-C.garr_03:1830169..1832446- (Citrus garrawayiback to top Coding sequence (CDS) from alignment at hap1-C.garr_03:1830169..1832446- >hap1-g6305.t2_Cgarrawayi-UQ_v1 ID=hap1-g6305.t2_Cgarrawayi-UQ_v1; Name=hap1-g6305.t2; organism=Citrus garrawayi; type=CDS; length=648bp; location=Sequence derived from: hap1-C.garr_03:1830169..1832446- (Citrus garrawayiback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|