hap1-g6544.t2
|
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of hap1-g6544.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A067H8Q2|A0A067H8Q2_CITSI (Polyadenylate-binding protein OS=Citrus sinensis OX=2711 GN=CISIN_1g006282mg PE=3 SV=1) HSP 1 Score: 1316.98 bits (3407), Expect = 0.000e+0 Identity = 640/652 (98.16%), Postives = 644/652 (98.77%), Query Frame = 0 Query: 1 MAQIQVQHQAQMSAPNGVAAGASGNQFLATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGSSGLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGLVQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPIDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNQADQLASLSLNENLVS 652
MAQIQVQHQAQMS PNGVAAGASGNQFL TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA DGSGQS+GFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN+FVKNL ESTTDEDLKKIFGEYGTITSAVVMRDGDGKSK FGFVNFENADDAAKAV+ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPG SGLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAG VQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVP+DMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANN ADQLASLSLNENLVS
Sbjct: 1 MAQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGPVQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENLVS 652
BLAST of hap1-g6544.t2 vs. ExPASy TrEMBL (2024)
Match: tr|V4T450|V4T450_CITCL (Polyadenylate-binding protein OS=Citrus clementina OX=85681 GN=CICLE_v10000537mg PE=3 SV=1) HSP 1 Score: 1310.05 bits (3389), Expect = 0.000e+0 Identity = 639/652 (98.01%), Postives = 642/652 (98.47%), Query Frame = 0 Query: 1 MAQIQVQHQAQMSAPNGVAAGASGNQFLATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGSSGLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGLVQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPIDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNQADQLASLSLNENLVS 652
MAQIQVQHQAQMS PNGVAAGASGNQFL TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA DGSGQS+GFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN+FVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSK FGFVNFEN DDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPG SGLGQQFLYGQAPPAII PQAGFGYQQQLVPGMRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAG VQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAG MLPVP+DMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANN ADQLASLSLNENLVS
Sbjct: 1 MAQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAII-PQAGFGYQQQLVPGMRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGPVQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGGMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENLVS 651
BLAST of hap1-g6544.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A067GWV9|A0A067GWV9_CITSI (Polyadenylate-binding protein OS=Citrus sinensis OX=2711 GN=CISIN_1g006282mg PE=3 SV=1) HSP 1 Score: 1150.19 bits (2974), Expect = 0.000e+0 Identity = 559/571 (97.90%), Postives = 564/571 (98.77%), Query Frame = 0 Query: 82 ADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGSSGLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGLVQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPIDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNQADQLASLSLNENLVS 652
+ AARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA DGSGQS+GFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN+FVKNL ESTTDEDLKKIFGEYGTITSAVVMRDGDGKSK FGFVNFENADDAAKAV+ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPG SGLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAG VQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVP+DMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANN ADQLASLSLNENLVS
Sbjct: 5 SSAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGPVQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENLVS 575 HSP 2 Score: 195.667 bits (496), Expect = 1.035e-50 Identity = 106/287 (36.93%), Postives = 163/287 (56.79%), Query Frame = 0 Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMY----SHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQ 300
++++ +LD ++ L+D FS G +LS ++ D S + S G+G+V + N A A+D LN +N+K + + + R+ K+ N+F+KNLD+S + L F +G I S + DG G+S+ FGFV FEN + A A++ LNG +D++ +VG +K ERE +K +F N+++KNL +S DE LK++F E+GTITS VMRD G SKG GFV F ++A++A+ +NGK + YV AQ+K ER L+ QF Q
Sbjct: 42 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQ-SKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQ-ELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ 326
BLAST of hap1-g6544.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A067GWK3|A0A067GWK3_CITSI (Polyadenylate-binding protein OS=Citrus sinensis OX=2711 GN=CISIN_1g006282mg PE=3 SV=1) HSP 1 Score: 1140.56 bits (2949), Expect = 0.000e+0 Identity = 574/652 (88.04%), Postives = 580/652 (88.96%), Query Frame = 0 Query: 1 MAQIQVQHQAQMSAPNGVAAGASGNQFLATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGSSGLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGLVQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPIDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNQADQLASLSLNENLVS 652
MAQIQVQHQAQMS PNGVAAGASGNQFL TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIA DGSGQS+GFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN+FVKNL ESTTDEDLKKIFGEYGTITSAVVMRDGDGKSK FGFVNFENADDAAKAV+ALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPG SGLGQQFLYGQAPPAIIPPQ MP +G + P GR NMQDFPFDMGAGSMLPVP+DMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANN ADQLASLSLNENLVS
Sbjct: 1 MAQIQVQHQAQMSGPNGVAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGPSGLGQQFLYGQAPPAIIPPQ-------------------MP-------PRGHAYRYPLGR---------------------------------NMQDFPFDMGAGSMLPVPVDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNPADQLASLSLNENLVS 593
BLAST of hap1-g6544.t2 vs. ExPASy TrEMBL (2024)
Match: tr|M5XRJ2|M5XRJ2_PRUPE (Polyadenylate-binding protein OS=Prunus persica OX=3760 GN=PRUPE_1G432200 PE=3 SV=1) HSP 1 Score: 1092.8 bits (2825), Expect = 0.000e+0 Identity = 534/654 (81.65%), Postives = 589/654 (90.06%), Query Frame = 0 Query: 1 MAQIQVQHQAQMSAPNGVAAGASG--NQFLATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGSSGLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGLVQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPIDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNQADQLASLSLNENLVS 652
MAQIQVQHQ ++ PNGVAA A G QF++TSLYVGDLD NVTDSQLYDLF+QVGQV+SVRVCRDLSTRRSLGYGYVNY+NP DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDK+IDHKALHDTFSSFGNILSCKIA DG+GQS+G+GFVQF+++E+AQ+AIDKLNGMLINDK VFVGHFLRKQER+ KTKFNN++VKN++ESTT++DLKKIFGE+G ITS VVMRDGDGKS+ FGFVNFE+ D AAKAVD LNGKKFD++EWYVGKAQKK ERE ELK +FEQ+MKE DKFQG+NLYIKNL DSI DEKLKELFSE+GT+TSCKVMRDP G S+GSGFVAFST EEASRALAEMNGKM+VSKPLYVA+AQRKEERRARLQAQFSQMRPVAM PSV PRMPMYPPG+ GLGQQFLYGQAPP+IIPPQAGFGYQQQLVPG+RP GAPMPNFFVP+V QG QGQRPGGRRGAG VQQ QQP+P+M M PRG YRYP GRNMQ+ PF ML VP DMG GIP RDA+ GQ +P AL+TALANAS EQQRT+LGE+LYPLV+QLE ++AAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR+VAQQQAN+ ADQL+SLSLN+NLVS
Sbjct: 1 MAQIQVQHQPPVTGPNGVAANAGGAPGQFVSTSLYVGDLDQNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKAIDHKALHDTFSSFGNILSCKIATDGTGQSKGYGFVQFDSEEAAQSAIDKLNGMLINDKPVFVGHFLRKQERDGAWNKTKFNNVYVKNISESTTEDDLKKIFGEHGQITSVVVMRDGDGKSRCFGFVNFEDPDAAAKAVDNLNGKKFDEKEWYVGKAQKKYERELELKERFEQSMKEASDKFQGVNLYIKNLDDSISDEKLKELFSEYGTVTSCKVMRDPDGNSRGSGFVAFSTTEEASRALAEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMRPVAMAPSVAPRMPMYPPGAPGLGQQFLYGQAPPSIIPPQAGFGYQQQLVPGIRPGGAPMPNFFVPMVQQGPQGQRPGGRRGAGPVQQNQQPVPMMQQHMLPRGRVYRYPPGRNMQEVPFSGVPSGMLSVPYDMG-GIPMRDAAGGQGVP--ALATALANASTEQQRTMLGEALYPLVDQLEHESAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQQANSSADQLSSLSLNDNLVS 651
BLAST of hap1-g6544.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA39VGE2|A0AA39VGE2_ACESA (Polyadenylate-binding protein OS=Acer saccharum OX=4024 GN=LWI29_037372 PE=3 SV=1) HSP 1 Score: 1089.72 bits (2817), Expect = 0.000e+0 Identity = 567/662 (85.65%), Postives = 601/662 (90.79%), Query Frame = 0 Query: 1 MAQIQVQHQAQMSAPNGVAAGA---------SGNQFLATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGSSGLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGLVQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPIDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSV-AQQQANNQADQLASLSLNENLVS 652
MAQIQVQHQAQ+S PNGVAA A SGNQFL TSLYVGDLDFNVTDSQLYDLFSQVGQV+SVRVCRDLSTRRSLGYGYVNY P DAARALDVLNFTP+NNKSIRIMYSHRDPSIRKSGTGNIFIKNLDK+IDHKALHDTFSSFG+ILSCKIA D SGQS+G+GFVQFEN ++AQNAIDKLNGMLINDKQVFVGHFLRKQER++ +TKF N++VKNL+EST D+DLK IFGEYGTITSAVVMRDGDGKSK FGFVNFENADDAAKAVDALNG KFDD+EWYVGKAQKK EREQELKG+FEQ +KETVDKFQGLNLY+KNL DSIDDEKLKELFSEFGTITSCKVMRDPSGIS+GSGFVAFSTPE+ASRAL EMNGKMIVSKPLYVA+AQRKEERRARLQAQFSQMRPVAM PSV PRMPMYPPG+ GLGQQF+YGQ PPAIIPPQAGFGYQQQLVPGMRP GAPMPNFFVP+V QGQQGQRPGGRRG G VQQ+QQP+P+M QM PRG YRYP GRNM D P MLPVP DMGAG+ RDA+VGQPMPITALSTALANA PEQQRTLLGESLYP VEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR+V AQQQAN+ DQLASLSLN+NLVS
Sbjct: 1 MAQIQVQHQAQLSGPNGVAAAAAAAAAAAGASGNQFLTTSLYVGDLDFNVTDSQLYDLFSQVGQVVSVRVCRDLSTRRSLGYGYVNYNGPQDAARALDVLNFTPINNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKAIDHKALHDTFSSFGSILSCKIATDASGQSKGYGFVQFENGDAAQNAIDKLNGMLINDKQVFVGHFLRKQERDSALSRTKFTNVYVKNLSESTKDDDLKNIFGEYGTITSAVVMRDGDGKSKCFGFVNFENADDAAKAVDALNGMKFDDKEWYVGKAQKKYEREQELKGKFEQTIKETVDKFQGLNLYVKNLDDSIDDEKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTPEDASRALQEMNGKMIVSKPLYVALAQRKEERRARLQAQFSQMRPVAMAPSVAPRMPMYPPGAPGLGQQFMYGQGPPAIIPPQAGFGYQQQLVPGMRPGGAPMPNFFVPMVQQGQQGQRPGGRRGGGPVQQSQQPVPLMQQQMLPRGRVYRYPPGRNMPDVPMP----GMLPVPYDMGAGMAMRDATVGQPMPITALSTALANAPPEQQRTLLGESLYPQVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRTVAAQQQANSPTDQLASLSLNDNLVS 658
BLAST of hap1-g6544.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6P5T1N8|A0A6P5T1N8_PRUAV (Polyadenylate-binding protein OS=Prunus avium OX=42229 GN=LOC110761930 PE=3 SV=1) HSP 1 Score: 1088.95 bits (2815), Expect = 0.000e+0 Identity = 532/654 (81.35%), Postives = 588/654 (89.91%), Query Frame = 0 Query: 1 MAQIQVQHQAQMSAPNGVAAGASG--NQFLATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGSSGLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGLVQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPIDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNQADQLASLSLNENLVS 652
MAQIQVQHQ ++APNGVAA A G QF++TSLYVGDLD NVTDSQLYDLF+QVGQV+SVRVCRDLSTRRSLGYGYVNY+NP DAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDK+IDHKALHDTFSSFGNILSCKIA DG+GQS+G+GFVQF+++E+AQ+AIDKLNGMLINDK VFVGHFLRKQER+ KTKFNN++VKN++ESTT++DLKKIFGE+G ITS VVMRDGDGKS+ FGFVNFE+ D AAKAVD LNGKKFD++EWYVGKAQKK ERE ELK +FEQ+MKE DKFQG+NLYIKNL DSI DEKLKELFS++GT+TSCKVMRDP G S+GSGFVAFST EEASRALAEMNGKM+VSKPLYVA+AQRKEERRARLQAQFSQMRPV M PSV PRMPMYPPG+ GLGQQFLYGQAPP+IIPPQAGFGYQQQLVPG+RP GAPMPNFFVP+V QG QGQRPGGRRGAG VQQ QQP+P+M M PRG YRYP GRNMQ+ PF ML VP DMG GIP RDA+ GQ +P AL+TALANAS EQQRT+LGE+LYP V+QLE ++AAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR+VAQQQAN+ ADQL+SLSLN+NLVS
Sbjct: 1 MAQIQVQHQPPVTAPNGVAANAGGAPGQFVSTSLYVGDLDQNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKAIDHKALHDTFSSFGNILSCKIATDGTGQSKGYGFVQFDSEEAAQSAIDKLNGMLINDKPVFVGHFLRKQERDGAWNKTKFNNVYVKNISESTTEDDLKKIFGEHGQITSVVVMRDGDGKSRCFGFVNFEDPDAAAKAVDNLNGKKFDEKEWYVGKAQKKYERELELKERFEQSMKEASDKFQGVNLYIKNLDDSISDEKLKELFSDYGTVTSCKVMRDPDGNSRGSGFVAFSTTEEASRALAEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMRPVTMAPSVAPRMPMYPPGAPGLGQQFLYGQAPPSIIPPQAGFGYQQQLVPGIRPGGAPMPNFFVPMVQQGPQGQRPGGRRGAGPVQQNQQPVPMMQQHMLPRGRVYRYPPGRNMQEVPFSGVPSGMLSVPYDMG-GIPMRDAAGGQGVP--ALATALANASTEQQRTMLGEALYPQVDQLEHESAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQQANSSADQLSSLSLNDNLVS 651
BLAST of hap1-g6544.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2I4ESD2|A0A2I4ESD2_JUGRE (Polyadenylate-binding protein OS=Juglans regia OX=51240 GN=LOC108992262 PE=3 SV=1) HSP 1 Score: 1085.86 bits (2807), Expect = 0.000e+0 Identity = 534/654 (81.65%), Postives = 587/654 (89.76%), Query Frame = 0 Query: 2 AQIQVQHQAQMSAPNGVAAGASGNQFLATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGSSGLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGLVQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPIDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSV---AQQQANNQADQLASLSLNENLVS 652
AQIQVQHQ +S PNGV +GA NQF+ TSLYVGDLD NVTDSQLYDLF QVGQV+SVRVCRD+STRRSLGYGYVNY+NP DAARA++VLNFTPLNNK IRIMYSHRDPSIRKSGT NIFIKNLDK+IDHKAL DTFS+FGNILS KIA D +GQS+G+GFVQFEN+ESAQ+AIDKLNGML+NDKQVFV HFLRKQERE+ TKFNN++VKNL+E+TTDED KKIFGEYG ITSAVVMRD DGKSKGFGFVN+EN DDAAKAV+ALNGK DD+EWYVGKAQKKSERE ELKG+FEQ+MKE VDKFQG+NLY+KNL DSI DEKLKELFSEFGTITSCKVMRDPSG+S+GSGFVAFST EEASRAL MNGKM+VSKPLYVA+AQRKEERRARLQAQFSQMRPVAM PSV PRMP++PPG+ GLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRP GAPMPNF+VP+V QGQQG RPGGRRGAG VQ TQQP+P+M QM PRG YRYP GRNM D P AG ML VP D+G G P RDA++GQPMPI AL+TALANA+PEQQRT+LGE+LYPLV+QLE ++AAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAM+VLR+V AQQQAN+ ADQLA LSLN+NLVS
Sbjct: 3 AQIQVQHQTPVSGPNGVLSGAGTNQFVPTSLYVGDLDVNVTDSQLYDLFGQVGQVVSVRVCRDMSTRRSLGYGYVNYSNPQDAARAINVLNFTPLNNKPIRIMYSHRDPSIRKSGTANIFIKNLDKAIDHKALQDTFSAFGNILSSKIATDANGQSKGYGFVQFENEESAQDAIDKLNGMLLNDKQVFVTHFLRKQERESSLGNTKFNNVYVKNLSEATTDEDFKKIFGEYGKITSAVVMRDADGKSKGFGFVNYENVDDAAKAVEALNGKVVDDKEWYVGKAQKKSERELELKGRFEQSMKEAVDKFQGMNLYVKNLDDSISDEKLKELFSEFGTITSCKVMRDPSGVSRGSGFVAFSTSEEASRALDAMNGKMVVSKPLYVAIAQRKEERRARLQAQFSQMRPVAMAPSVGPRMPIFPPGAPGLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRPGGAPMPNFYVPLVQQGQQGPRPGGRRGAGPVQHTQQPVPLMQQQMLPRGRVYRYPPGRNMPDVPMSGLAGGMLSVPYDIGGG-PMRDATLGQPMPIQALATALANATPEQQRTMLGEALYPLVDQLEHESAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMDVLRNVVNAAQQQANSPADQLAGLSLNDNLVS 655
BLAST of hap1-g6544.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5B7AW99|A0A5B7AW99_DAVIN (Polyadenylate-binding protein OS=Davidia involucrata OX=16924 GN=Din_028844 PE=3 SV=1) HSP 1 Score: 1075.46 bits (2780), Expect = 0.000e+0 Identity = 535/652 (82.06%), Postives = 589/652 (90.34%), Query Frame = 0 Query: 1 MAQIQVQHQAQMSAPNGVAAGASGNQFLATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGSSGLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGLVQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPIDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNQADQLASLSLNENLVS 652
MAQIQVQHQ+ ++ PNGVAA NQF+ TSLYVGDLDFNVTDSQLYDLF+QVGQV+SVRVCRDLSTRRSLGYGYVNY+NP DAARA+D+LNFTPLN KSIR+M SHRDPSIRKSGT NIFIKNLDK+ID+KAL+DTFSSFGNILSCKIA+D SG S+G+GFVQFEN+ESAQNAIDKLNGMLINDKQV+VGHFLRKQERET TKFNN++VKNL+ESTT+EDLK IFGEYGTITS VVMRDGDGKSK FGFVNFENADDAAKAV+ALNGKK DD+EWYVGKAQKKSERE ELK FEQ+ +E VDKFQG+NLY+KNL DSIDD+KLKELFSEFGTITSCKVMRDPSGIS+GSGFVAFSTPEEASRALAEMNGK+IVSKPLYVA+AQRKEERRARLQAQFSQMRPVAM PS+ PRMPMYPPG+ GLGQQ YGQ PPAIIPPQAGFGYQQQLVPGMRP GAPMPNFF+P+V QGQQGQRPGGRRG G QQTQQP+P+M QM PRG YRYP GRN+ D P AG ML VP DMG +P RDA++GQPMP+ AL+TALANA P+QQRT+LGE+LYP V+QLE + AAKVTGMLLEMDQTEVLHLLESP+ALKAKVAEAMEVLR+VAQQQ ++ ADQLASLSLN+NLVS
Sbjct: 1 MAQIQVQHQSPVTGPNGVAANPGANQFVPTSLYVGDLDFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARAMDLLNFTPLNGKSIRVMNSHRDPSIRKSGTANIFIKNLDKAIDNKALNDTFSSFGNILSCKIASDPSGLSKGYGFVQFENEESAQNAIDKLNGMLINDKQVYVGHFLRKQERETAMNYTKFNNVYVKNLSESTTEEDLKNIFGEYGTITSVVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKIDDKEWYVGKAQKKSERELELKSHFEQSAREAVDKFQGVNLYVKNLDDSIDDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTPEEASRALAEMNGKLIVSKPLYVALAQRKEERRARLQAQFSQMRPVAMAPSIAPRMPMYPPGAPGLGQQLFYGQGPPAIIPPQAGFGYQQQLVPGMRPGGAPMPNFFLPLVQQGQQGQRPGGRRGPGPFQQTQQPVPLMQQQMLPRGRVYRYPPGRNVPDVPMPGVAGGMLSVPYDMGGMLP-RDATMGQPMPVPALATALANAPPDQQRTMLGENLYPQVDQLEHEHAAKVTGMLLEMDQTEVLHLLESPDALKAKVAEAMEVLRNVAQQQVSSPADQLASLSLNDNLVS 651
BLAST of hap1-g6544.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5B7AVH5|A0A5B7AVH5_DAVIN (Polyadenylate-binding protein OS=Davidia involucrata OX=16924 GN=Din_028842 PE=3 SV=1) HSP 1 Score: 1073.15 bits (2774), Expect = 0.000e+0 Identity = 536/652 (82.21%), Postives = 589/652 (90.34%), Query Frame = 0 Query: 1 MAQIQVQHQAQMSAPNGVAAGASGNQFLATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGSSGLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGLVQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPIDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNQADQLASLSLNENLVS 652
MAQIQVQHQ+ +S PNGVAA A Q ++TSLYVGDLDFNVTDSQLYDLF+QVGQV+SVRVCRDLSTRRSLGYGYVNY+NP DAARA+D+LNFTPLN KSIR+M SHRDPSIRKSGT NIFIKNLDK+ID+KAL+DTFSSFGNILSCKIA+D SG S+G+GFVQFEN+ESAQNAIDKLNGMLINDKQV+VGHFLRKQERET TKFNN++VKNL+ESTT+EDLK IFGEYGTITS VVMRDGDGKSK FGFVNFENADDAAKAV+ALNGKK DD+EWYVGKAQKKSERE ELK FEQ+ +E VDKFQG+NLY+KNL DSIDD+KLKELFSEFGTITSCKVMRDPSGIS+GSGFVAFSTPEEASRALAEMNGK+IVSKPLYVA+AQRKEERRARLQAQFSQMRPVAM PS+ PRMPMYPPG+ GLGQQ YGQ PPAIIPPQAGFGYQQQLVPGMRP GAPMPNFF+P+V QGQQGQRPGGRRG G QQTQQP+P+M QM PRG YRYP GRN+ D P AG ML VP DMG +P RDA++GQPMP+ AL+TALANA P+QQRT+LGE+LYP V+QLE + AAKVTGMLLEMDQTEVLHLLESP+ALKAKVAEAMEVLR+VAQQQAN+ DQLASLSLN+NLVS
Sbjct: 1 MAQIQVQHQSSLSGPNGVAANA---QLVSTSLYVGDLDFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARAMDLLNFTPLNGKSIRVMNSHRDPSIRKSGTANIFIKNLDKAIDNKALNDTFSSFGNILSCKIASDPSGLSKGYGFVQFENEESAQNAIDKLNGMLINDKQVYVGHFLRKQERETAMNYTKFNNVYVKNLSESTTEEDLKNIFGEYGTITSVVVMRDGDGKSKCFGFVNFENADDAAKAVEALNGKKIDDKEWYVGKAQKKSERELELKSHFEQSAREAVDKFQGVNLYVKNLDDSIDDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTPEEASRALAEMNGKLIVSKPLYVALAQRKEERRARLQAQFSQMRPVAMAPSIAPRMPMYPPGAPGLGQQLFYGQGPPAIIPPQAGFGYQQQLVPGMRPGGAPMPNFFLPLVQQGQQGQRPGGRRGPGPFQQTQQPVPLMQQQMLPRGRVYRYPPGRNVPDVPMPGVAGGMLSVPYDMGGMLP-RDATMGQPMPVPALATALANAPPDQQRTMLGENLYPQVDQLEHEHAAKVTGMLLEMDQTEVLHLLESPDALKAKVAEAMEVLRNVAQQQANSPTDQLASLSLNDNLVS 648
BLAST of hap1-g6544.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|P42731|PABP2_ARATH (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PAB2 PE=1 SV=1) HSP 1 Score: 875.159 bits (2260), Expect = 0.000e+0 Identity = 445/654 (68.04%), Postives = 527/654 (80.58%), Query Frame = 0 Query: 1 MAQIQVQHQ-------AQMSAPNGVAAGASGNQFLATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGSSGLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGLVQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPIDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNQADQLASLSLN 647
MAQ+Q+Q Q A SAP + GA+ QF TSLYVGDLDFNVTDSQL+D F Q+G V++VRVCRDL TRRSLGYGYVN+ NP DAARA+ LN+ PL K IR+MYSHRDPS+R+SG GNIFIKNLD+SIDHKALHDTFSSFGNI+SCK+A D SGQS+G+GFVQ+ N+ESAQ AI+KLNGML+NDKQV+VG FLR+QER++ A KTKF N++VKNLAESTTD+DLK FGEYG ITSAVVM+DG+GKSKGFGFVNFENADDAA+AV++LNG KFDD+EWYVG+AQKKSERE EL+ ++EQ +KE DKFQ NLY+KNL SI DEKLKE+FS FGT+TS KVMRDP+G SKGSGFVAF+TPEEA+ A+++++GKMI SKPLYVA+AQRKE+RR RLQAQFSQ+RPVAM PSV PRMP+YPPG G+GQQ YGQAPPA+IPPQ G+GYQQQLVPGMRP G P+P+FF+P+V QQ G R G +Q +QQ P+M QM PRG +RYP GR G +P P DMG + P+ I AL++ L+NA+PEQQRT+LGE LYPLVEQ+E ++AAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAM+VLRSVA A +QLASL+L+
Sbjct: 1 MAQVQLQGQTPNGSTAAVTSAP-ATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQFSQVRPVAMQPSVGPRMPVYPPGGPGIGQQMFYGQAPPAMIPPQPGYGYQQQLVPGMRPGGGPVPSFFMPMVQPQQQRPG--GGRRPGGIQHSQQQNPMMQQQMHPRGRMFRYPQGR---------GGSGDVP-PYDMGNNM---------PLTIGALASNLSNATPEQQRTMLGEVLYPLVEQVEAESAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMDVLRSVA---AGGATEQLASLNLS 629
BLAST of hap1-g6544.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9FXA2|PABP8_ARATH (Polyadenylate-binding protein 8 OS=Arabidopsis thaliana OX=3702 GN=PAB8 PE=1 SV=1) HSP 1 Score: 865.914 bits (2236), Expect = 0.000e+0 Identity = 438/631 (69.41%), Postives = 521/631 (82.57%), Query Frame = 0 Query: 29 ATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGSSGLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGL------VQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPIDM--GAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNQADQLASLSLNENLV 651
TSLYVGDLD VTDSQL++ F+Q GQV+SVRVCRD++TRRSLGYGYVNYA P DA+RAL+ LNF LN ++IR+MYS RDPS+RKSG GNIFIKNLDKSIDHKALH+TFS+FG ILSCK+A D SGQS+G+GFVQ++ E+AQ AIDKLNGML+NDKQV+VG F+ K +R+ K KF N++VKNL+ES +DE+L K+FGE+G TS V+MRDG+GKSKGFGFVNFEN+DDAA+AVDALNGK FDD+EW+VGKAQKKSERE ELK +FEQ++KE DK QG NLY+KNL +S+ D+KL+E F+ FGTITSCKVMRDPSG+S+GSGFVAFSTPEEA+RA+ EMNGKMIV+KPLYVA+AQRKE+R+ARLQAQFSQMRPV M P+V PRM MYPPG +GQQ YGQ PPA+I PQ GFGYQQQLVPGMRP G+PMPNFF+P++ QGQQ Q+ ++ + Q QQP P+M QM PRG YRYP R++ P +ML VP D+ G G+ RD+ QP+PI AL+T LANA+PEQQRT+LGE+LYPLVEQLE ++AAKVTGMLLEMDQTEVLHLLESPEALKAKV EAM+VLRSVAQQQA ADQLASLSL +N+V
Sbjct: 44 TTSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNELNFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETFSAFGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQVYVGPFVHKLQRDPSGEKVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGKSKGFGFVNFENSDDAARAVDALNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDPSGVSRGSGFVAFSTPEEATRAITEMNGKMIVTKPLYVALAQRKEDRKARLQAQFSQMRPVNMPPAVGPRMQMYPPGGPPMGQQLFYGQGPPAMI-PQPGFGYQQQLVPGMRPGGSPMPNFFMPMMQQGQQQQQQQQQQQRPGGGRRGALPQPQQPSPMMQQQMHPRGRMYRYPQ-RDVNTMPGP--TQNMLSVPYDVSSGGGVHHRDSPTSQPVPIVALATRLANAAPEQQRTMLGENLYPLVEQLEPESAAKVTGMLLEMDQTEVLHLLESPEALKAKVTEAMDVLRSVAQQQAGGAADQLASLSLGDNIV 670
BLAST of hap1-g6544.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|O22173|PABP4_ARATH (Polyadenylate-binding protein 4 OS=Arabidopsis thaliana OX=3702 GN=PAB4 PE=1 SV=1) HSP 1 Score: 803.127 bits (2073), Expect = 0.000e+0 Identity = 415/633 (65.56%), Postives = 495/633 (78.20%), Query Frame = 0 Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGSSGLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRPAGAPMPNFF-VPVVSQGQQGQRPGGRR-GAG-LVQQTQQPLPIMPHQMPPRGHAYRYPL-GRNMQDFPFDMGAGSMLPVPIDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQ--------QQANNQADQLASLSLNENL 650
SLYVGDLDFNVTDSQLYD F++V QV+SVRVCRD +T SLGYGYVNY+N DA +A+ LN++ LN K IRI YS RD S R+SG GN+F+KNLDKS+D+K LH+ FS G I+SCK+A D GQSRG+GFVQF+ ++SA+NAI+KLNG ++NDKQ+FVG FLRK+ERE+ A K KF N++VKNL+E+TTD++LK FG+YG+I+SAVVMRDGDGKS+ FGFVNFEN +DAA+AV+ALNGKKFDD+EWYVGKAQKKSERE EL ++EQ + +KF GLNLY+KNL D++ DEKL+ELF+EFGTITSCKVMRDPSG SKGSGFVAFS EASR L EMNGKM+ KPLYVA+AQRKEERRA+LQAQFSQMRP A P V PRMP++ G+ GLGQQ YGQ PP IIP Q GFGYQ QLVPGMRPA FF P++ GQQG RPGGRR G G + Q QQP+P M QM PRG YRYP GRNM D P G M+PV DM +P QPM L+T+LANA+P QQRTLLGESLYPLV+Q+E + AAKVTGMLLEMDQTEVLHLLESPEAL AKV+EA++VLR+V Q ++ + +D LASLS+N++L
Sbjct: 46 CSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQKLNYSYLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLRKEERESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFENPEDAARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQRKEERRAKLQAQFSQMRP-AFIPGVGPRMPIFTGGAPGLGQQIFYGQGPPPIIPHQPGFGYQPQLVPGMRPA------FFGGPMMQPGQQGPRPGGRRSGDGPMRHQHQQPMPYMQPQMMPRGRGYRYPSGGRNMPDGPM---PGGMVPVAYDMNV-MP-----YSQPMSAGQLATSLANATPAQQRTLLGESLYPLVDQIESEHAAKVTGMLLEMDQTEVLHLLESPEALNAKVSEALDVLRNVNQPSSQGSEGNKSGSPSDLLASLSINDHL 662 HSP 2 Score: 56.9954 bits (136), Expect = 4.565e-7 Identity = 33/107 (30.84%), Postives = 60/107 (56.07%), Query Frame = 0 Query: 2 AQIQVQHQAQMSAPNGVAAGASGNQFLATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR 108
AQ + + + ++S + GN+F +LYV +LD VTD +L +LF++ G + S +V RD S S G G+V ++ ++A+R L+ +N + K + + + R
Sbjct: 300 AQKKSERELELSRRYEQGSSDGGNKFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSG-TSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQR 405
BLAST of hap1-g6544.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q05196|PABP5_ARATH (Polyadenylate-binding protein 5 OS=Arabidopsis thaliana OX=3702 GN=PAB5 PE=1 SV=3) HSP 1 Score: 612.453 bits (1578), Expect = 0.000e+0 Identity = 344/638 (53.92%), Postives = 446/638 (69.91%), Query Frame = 0 Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER---ETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR-PVAMGPSVPPRMP---MYPPGS--SGLGQQFLYGQAPPAIIPPQ-AGFGYQQQLVPGMRPAGAPMPNFFV--PVVSQGQQGQRPGGRRGAGLVQQTQQPLPIMPHQMPPRGHAYRYPLG----RNMQDFPFDMGAGSMLPVPIDMGA---GIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNQADQLASLSLNE 648
+SLYVGDLD +V +S L DLF+QV V ++RVCRDL T RSLGY YVN+ANP DA+RA++ LN+ P+ ++ IRIM S+RDPS R SG GN+FIKNLD SID+KAL++TFSSFG ILSCK+A D G+S+G+GFVQFE +E+AQ AIDKLNGML+NDKQVFVGHF+R+Q+R E+ A+ + F N++VKNL + TD++LKK FG+YG I+SAVVM+D G S+ FGFVNF + + AA AV+ +NG + YVG+AQKKS+RE+EL+ +FEQ +K QG NLY+KNL DS++DEKLKE+FSE+G +TSCKVM + G+S+G GFVA+S PEEA A+ EMNGKMI KPLYVA+AQRKEER+A LQ+ F+Q+R P M P VP M +PPG SG G ++P Q G+GYQ Q +PGMRP P PNF + P+ Q Q G R G RRGA +QQ Q Q + +A R+ G RN + G ++P+P++ A P+R + P+ I+ L++ LA ASP++ +LG+ LYPLVEQ E AAKVTGMLLEMDQ E+LHLLESPEALKAKV+EA++VLR A A + D +LS +E
Sbjct: 59 SSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPS-FTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSP-VPSPMSGFHHHPPGGPMSGPHHPMFIGHNGQGLVPSQPMGYGYQVQFMPGMRPGAGP-PNFMMPFPLQRQTQPGPRVGFRRGANNMQQQFQ------QQQMLQQNASRFMGGAGNRRNGMEASAPQG---IIPLPLNASANSHNAPQR-SHKPTPLTISKLASDLALASPDKHPRMLGDHLYPLVEQQEPANAAKVTGMLLEMDQAEILHLLESPEALKAKVSEALDVLRRSADPAAVSSVDDQFALSSSE 682
BLAST of hap1-g6544.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|O64380|PABP3_ARATH (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=PAB3 PE=2 SV=1) HSP 1 Score: 611.298 bits (1575), Expect = 0.000e+0 Identity = 340/633 (53.71%), Postives = 432/633 (68.25%), Query Frame = 0 Query: 2 AQIQVQHQAQMSAPNGVAAGASGNQFLATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGSSGLGQQFLYGQAPPAIIPPQ-AGFGYQQQLVPGMRPAGAPMPNFFV--PVVSQGQQGQRPGGRRGAGLVQQTQQPLPIMPHQMPPRGHAYRYPL--GRNMQDFPFDMGAGSMLPVPIDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 627
AQ VQ + P+ V + +SLY GDLD VT++ L+DLF V V+SVRVCRD RRSLGY Y+N++NP DA RA++ LN+TPL ++ IRIM S+RDPS R SG GNIFIKNLD SID+KAL +TFSSFG ILSCK+A D +G+S+G+GFVQFE +ESAQ AIDKLNGML+NDKQVFVGHF+R+QER + +F N++VKNL + +++L+K FG++G I+SAVVMRD G S+ FGFVNFE + AA AV+ +NG D YVG+AQKKSERE+EL+ +FEQ +K QG NLY+KNL DS+DDEKLKE+FSE+G +TS KVM +P G+S+G GFVA+S PEEA RAL+EMNGKMI KPLY+A+AQRKE+RRA LQA FSQ+R A GP + G Q GQ +++P Q G+G+Q Q +PGMRP P NF V P+ Q Q G R G RRGA VQQ Q +M H+ P G Y GRN D G + + I + A + +PI+ L+++LA+ASP + +LGE LYPLVE+ E AKVTGMLLEMDQ E+LHL+ESPEALK+KV+EA++VLR
Sbjct: 23 AQTSVQVPVSIPLPSPVVVADQTHP--NSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRD-QNRRSLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQRKEDRRAHLQALFSQIR--APGP-MSGFHHPPGGPMPGPPQHMYVGQNGASMVPSQPIGYGFQPQFMPGMRPGSGP-GNFIVPYPLQRQPQTGPRMGFRRGATNVQQHIQQQQLM-HRNPSPGMRYMNGASNGRNGMDSSVPQGILPPIIPLPIDASSISHQKAPL---LPISKLTSSLASASPADRTRMLGEQLYPLVERHEPLHVAKVTGMLLEMDQAEILHLMESPEALKSKVSEALDVLR 644
BLAST of hap1-g6544.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|P29341|PABP1_MOUSE (Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2) HSP 1 Score: 531.946 bits (1369), Expect = 0.000e+0 Identity = 301/642 (46.88%), Postives = 415/642 (64.64%), Query Frame = 0 Query: 23 SGNQFLATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ----MRPVAMGPSVPPRMPMYPPGS--SGLGQ-QFLYGQAPPAII---------PPQAGFGYQQQLVPG-MRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGLVQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPIDMGAGIPRRDASVGQPM-------PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNQA 638
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G S+G+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE A +F N+++KN E DE LK++FG++G S VM D GKSKGFGFV+FE +DA KAVD +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYVA+AQRKEER+A L Q+ Q +R V P + P P P G + + Q Q PP+ I Q + Q +PG +RPA AP P F + Q + +R A QT P P A P R + + + G + P P+ ++ QP P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++ ++A +A
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVP-NPVINPYQPAPPSGYFMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPA-APRPPFSTMRPASSQVPRVMSTQRVANTSTQTMGPRPAA-------AAAAATPAVRTVPQYKYAAGVRN----PQQHLNAQPQ--VTMQQPAVHVQGQEPLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKA 626 HSP 2 Score: 194.897 bits (494), Expect = 1.248e-52 Identity = 110/298 (36.91%), Postives = 173/298 (58.05%), Query Frame = 0 Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADG-SGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+ A+ A+D +N +I K V + +R+ K+ NIF+KNL +S ++ L F +G I S V+ D +G SKG+GFV+FE + A +A++ +NG +DR+ +VG+ + + ERE EL + ++ N+YIKN G+ +DDE+LKELF +FG S KVM D SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFT----------NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
BLAST of hap1-g6544.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|P11940|PABP1_HUMAN (Polyadenylate-binding protein 1 OS=Homo sapiens OX=9606 GN=PABPC1 PE=1 SV=2) HSP 1 Score: 531.176 bits (1367), Expect = 0.000e+0 Identity = 301/642 (46.88%), Postives = 414/642 (64.49%), Query Frame = 0 Query: 23 SGNQFLATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ----MRPVAMGPSVPPRMPMYPPGS--SGLGQ-QFLYGQAPPAII---------PPQAGFGYQQQLVPG-MRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGLVQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPIDMGAGIPRRDASVGQPM-------PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNQA 638
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G S+G+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE A +F N+++KN E DE LK +FG++G S VM D GKSKGFGFV+FE +DA KAVD +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYVA+AQRKEER+A L Q+ Q +R V P + P P P G + + Q Q PP+ I Q + Q +PG +RPA AP P F + Q + +R A QT P P A P R + + + G + P P+ ++ QP P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++ ++A +A
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVP-NPVINPYQPAPPSGYFMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPA-APRPPFSTMRPASSQVPRVMSTQRVANTSTQTMGPRPAA-------AAAAATPAVRTVPQYKYAAGVRN----PQQHLNAQPQ--VTMQQPAVHVQGQEPLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKA 626 HSP 2 Score: 193.741 bits (491), Expect = 4.184e-52 Identity = 109/298 (36.58%), Postives = 173/298 (58.05%), Query Frame = 0 Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADG-SGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+ A+ A+D +N +I K V + +R+ K+ NIF+KNL +S ++ L F +G I S V+ D +G SKG+GFV+FE + A +A++ +NG +DR+ +VG+ + + ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
BLAST of hap1-g6544.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|P61286|PABP1_BOVIN (Polyadenylate-binding protein 1 OS=Bos taurus OX=9913 GN=PABPC1 PE=2 SV=1) HSP 1 Score: 531.176 bits (1367), Expect = 0.000e+0 Identity = 301/642 (46.88%), Postives = 414/642 (64.49%), Query Frame = 0 Query: 23 SGNQFLATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ----MRPVAMGPSVPPRMPMYPPGS--SGLGQ-QFLYGQAPPAII---------PPQAGFGYQQQLVPG-MRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGLVQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPIDMGAGIPRRDASVGQPM-------PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNQA 638
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G S+G+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE A +F N+++KN E DE LK +FG++G S VM D GKSKGFGFV+FE +DA KAVD +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYVA+AQRKEER+A L Q+ Q +R V P + P P P G + + Q Q PP+ I Q + Q +PG +RPA AP P F + Q + +R A QT P P A P R + + + G + P P+ ++ QP P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++ ++A +A
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVP-NPVINPYQPAPPSGYFMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPA-APRPPFSTMRPASSQVPRVMSTQRVANTSTQTMGPRPAA-------AAAAATPAVRTVPQYKYAAGVRN----PQQHLNAQPQ--VTMQQPAVHVQGQEPLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKA 626 HSP 2 Score: 193.741 bits (491), Expect = 4.184e-52 Identity = 109/298 (36.58%), Postives = 173/298 (58.05%), Query Frame = 0 Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADG-SGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+ A+ A+D +N +I K V + +R+ K+ NIF+KNL +S ++ L F +G I S V+ D +G SKG+GFV+FE + A +A++ +NG +DR+ +VG+ + + ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
BLAST of hap1-g6544.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9EPH8|PABP1_RAT (Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1) HSP 1 Score: 529.635 bits (1363), Expect = 2.156e-180 Identity = 302/640 (47.19%), Postives = 417/640 (65.16%), Query Frame = 0 Query: 23 SGNQFLATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ----MRPVAMGPSVPPRMPMYPPGS--SGLGQ-QFLYGQAPPAII---------PPQAGFGYQQQLVPG-MRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGLVQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFP-FDMGAGSMLPV-PIDMGAGIPRRDASV---GQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNQA 638
S + SLYVGDL +VT++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G S+G+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE A +F N+++KN E DE LK++FG++G S VM D GKSKGFGFV+FE +DA KAVD +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYVA+AQRKEER+A L Q+ Q +R V P + P P P G + + Q Q PP+ I Q + Q +PG +RPA AP P F + Q + +R A QT M PR A ++ P + AG P ++ + + +V GQ P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++ ++A +A
Sbjct: 4 SAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVP-NPVINPYQPAPPSGYFMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPA-APRPPFSTMRPASSQVPRVMSTQRVANTSTQT----------MGPRPAAAATAATPAVRTVPQYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQGQE-PLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKA 626 HSP 2 Score: 194.897 bits (494), Expect = 1.647e-52 Identity = 110/298 (36.91%), Postives = 173/298 (58.05%), Query Frame = 0 Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADG-SGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+PS ++++ +L + L++ FS G ILS ++ D + +S G+ +V F+ A+ A+D +N +I K V + +R+ K+ NIF+KNL +S ++ L F +G I S V+ D +G SKG+GFV+FE + A +A++ +NG +DR+ +VG+ + + ERE EL + ++ N+YIKN G+ +DDE+LKELF +FG S KVM D SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFT----------NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
BLAST of hap1-g6544.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q5R8F7|PABP1_PONAB (Polyadenylate-binding protein 1 OS=Pongo abelii OX=9601 GN=PABPC1 PE=2 SV=1) HSP 1 Score: 529.25 bits (1362), Expect = 2.593e-180 Identity = 300/642 (46.73%), Postives = 413/642 (64.33%), Query Frame = 0 Query: 23 SGNQFLATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQ----MRPVAMGPSVPPRMPMYPPGS--SGLGQ-QFLYGQAPPAII---------PPQAGFGYQQQLVPG-MRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGLVQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPIDMGAGIPRRDASVGQPM-------PITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNQA 638
S + SLYVGDL + T++ LY+ FS G +LS+RVCRD+ TRRSLGY YVN+ PADA RALD +NF + K +RIM+S RDPS+RKSG GNIFIKNLDKSID+KAL+DTFS+FGNILSCK+ D +G S+G+GFV FE +E+A+ AI+K+NGML+ND++VFVG F ++ERE A +F N+++KN E DE LK +FG++G S VM D GKSKGFGFV+FE +DA KAVD +NGK+ + ++ YVG+AQKK ER+ ELK +FEQ ++ + ++QG+NLY+KNL D IDDE+L++ FS FGTITS KVM + G SKG GFV FS+PEEA++A+ EMNG+++ +KPLYVA+AQRKEER+A L Q+ Q +R V P + P P P G + + Q Q PP+ I Q + Q +PG +RPA AP P F + Q + +R A QT P P A P R + + + G + P P+ ++ QP P+TA + LA+A P++Q+ +LGE L+PL++ + A K+TGMLLE+D +E+LH+LESPE+L++KV EA+ VL++ ++A +A
Sbjct: 4 SAPSYPMASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMME-GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVP-NPVINPYQPAPPSGYFMAAIPQTQNRAAYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPA-APRPPFSTMRPASSQVPRVMSTQRVANTSTQTMGPRPAA-------AAAAATPAVRTVPQYKYAAGVRN----PQQHLNAQPQ--VTMQQPAVHVQGQEPLTA--SMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHQAKEAAQKA 626 HSP 2 Score: 191.815 bits (486), Expect = 1.903e-51 Identity = 109/298 (36.58%), Postives = 172/298 (57.72%), Query Frame = 0 Query: 109 DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADG-SGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR 405
+PS ++++ +L L++ FS G ILS ++ D + +S G+ +V F+ A+ A+D +N +I K V + +R+ K+ NIF+KNL +S ++ L F +G I S V+ D +G SKG+GFV+FE + A +A++ +NG +DR+ +VG+ + + ERE EL + ++ N+YIKN G+ +DDE+LK+LF +FG S KVM D SG SKG GFV+F E+A +A+ EMNGK + K +YV AQ+K ER+ L+ +F QM+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFT----------NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMK 284
BLAST of hap1-g6544.t2 vs. Araport11
Match: | (Symbols: ATPAB2, PAB2, PABP2 | poly(A) binding protein 2, ARABIDOPSIS POLY(A) BINDING 2, POLY(A) BINDING PROTEIN 2 | chr4:16336732-16339892 FORWARD LENGTH=629) HSP 1 Score: 875.159 bits (2260), Expect = 0.000e+0 Identity = 445/654 (68.04%), Postives = 527/654 (80.58%), Query Frame = 0 Query: 1 MAQIQVQHQ-------AQMSAPNGVAAGASGNQFLATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGSSGLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGLVQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPIDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNQADQLASLSLN 647
MAQ+Q+Q Q A SAP + GA+ QF TSLYVGDLDFNVTDSQL+D F Q+G V++VRVCRDL TRRSLGYGYVN+ NP DAARA+ LN+ PL K IR+MYSHRDPS+R+SG GNIFIKNLD+SIDHKALHDTFSSFGNI+SCK+A D SGQS+G+GFVQ+ N+ESAQ AI+KLNGML+NDKQV+VG FLR+QER++ A KTKF N++VKNLAESTTD+DLK FGEYG ITSAVVM+DG+GKSKGFGFVNFENADDAA+AV++LNG KFDD+EWYVG+AQKKSERE EL+ ++EQ +KE DKFQ NLY+KNL SI DEKLKE+FS FGT+TS KVMRDP+G SKGSGFVAF+TPEEA+ A+++++GKMI SKPLYVA+AQRKE+RR RLQAQFSQ+RPVAM PSV PRMP+YPPG G+GQQ YGQAPPA+IPPQ G+GYQQQLVPGMRP G P+P+FF+P+V QQ G R G +Q +QQ P+M QM PRG +RYP GR G +P P DMG + P+ I AL++ L+NA+PEQQRT+LGE LYPLVEQ+E ++AAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAM+VLRSVA A +QLASL+L+
Sbjct: 1 MAQVQLQGQTPNGSTAAVTSAP-ATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQFSQVRPVAMQPSVGPRMPVYPPGGPGIGQQMFYGQAPPAMIPPQPGYGYQQQLVPGMRPGGGPVPSFFMPMVQPQQQRPG--GGRRPGGIQHSQQQNPMMQQQMHPRGRMFRYPQGR---------GGSGDVP-PYDMGNNM---------PLTIGALASNLSNATPEQQRTMLGEVLYPLVEQVEAESAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMDVLRSVA---AGGATEQLASLNLS 629
BLAST of hap1-g6544.t2 vs. Araport11
Match: | (Symbols: PABP8, PAB8 | POLY(A) BINDING PROTEIN 8, poly(A) binding protein 8 | chr1:18416740-18419753 FORWARD LENGTH=671) HSP 1 Score: 865.914 bits (2236), Expect = 0.000e+0 Identity = 438/631 (69.41%), Postives = 521/631 (82.57%), Query Frame = 0 Query: 29 ATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGSSGLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGL------VQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPIDM--GAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNQADQLASLSLNENLV 651
TSLYVGDLD VTDSQL++ F+Q GQV+SVRVCRD++TRRSLGYGYVNYA P DA+RAL+ LNF LN ++IR+MYS RDPS+RKSG GNIFIKNLDKSIDHKALH+TFS+FG ILSCK+A D SGQS+G+GFVQ++ E+AQ AIDKLNGML+NDKQV+VG F+ K +R+ K KF N++VKNL+ES +DE+L K+FGE+G TS V+MRDG+GKSKGFGFVNFEN+DDAA+AVDALNGK FDD+EW+VGKAQKKSERE ELK +FEQ++KE DK QG NLY+KNL +S+ D+KL+E F+ FGTITSCKVMRDPSG+S+GSGFVAFSTPEEA+RA+ EMNGKMIV+KPLYVA+AQRKE+R+ARLQAQFSQMRPV M P+V PRM MYPPG +GQQ YGQ PPA+I PQ GFGYQQQLVPGMRP G+PMPNFF+P++ QGQQ Q+ ++ + Q QQP P+M QM PRG YRYP R++ P +ML VP D+ G G+ RD+ QP+PI AL+T LANA+PEQQRT+LGE+LYPLVEQLE ++AAKVTGMLLEMDQTEVLHLLESPEALKAKV EAM+VLRSVAQQQA ADQLASLSL +N+V
Sbjct: 44 TTSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNELNFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETFSAFGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQVYVGPFVHKLQRDPSGEKVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGKSKGFGFVNFENSDDAARAVDALNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDPSGVSRGSGFVAFSTPEEATRAITEMNGKMIVTKPLYVALAQRKEDRKARLQAQFSQMRPVNMPPAVGPRMQMYPPGGPPMGQQLFYGQGPPAMI-PQPGFGYQQQLVPGMRPGGSPMPNFFMPMMQQGQQQQQQQQQQQRPGGGRRGALPQPQQPSPMMQQQMHPRGRMYRYPQ-RDVNTMPGP--TQNMLSVPYDVSSGGGVHHRDSPTSQPVPIVALATRLANAAPEQQRTMLGENLYPLVEQLEPESAAKVTGMLLEMDQTEVLHLLESPEALKAKVTEAMDVLRSVAQQQAGGAADQLASLSLGDNIV 670
BLAST of hap1-g6544.t2 vs. Araport11
Match: | (Symbols: PABP8, PAB8 | POLY(A) BINDING PROTEIN 8, poly(A) binding protein 8 | chr1:18416740-18419753 FORWARD LENGTH=671) HSP 1 Score: 865.914 bits (2236), Expect = 0.000e+0 Identity = 438/631 (69.41%), Postives = 521/631 (82.57%), Query Frame = 0 Query: 29 ATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGSSGLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGL------VQQTQQPLPIMPHQMPPRGHAYRYPLGRNMQDFPFDMGAGSMLPVPIDM--GAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNQADQLASLSLNENLV 651
TSLYVGDLD VTDSQL++ F+Q GQV+SVRVCRD++TRRSLGYGYVNYA P DA+RAL+ LNF LN ++IR+MYS RDPS+RKSG GNIFIKNLDKSIDHKALH+TFS+FG ILSCK+A D SGQS+G+GFVQ++ E+AQ AIDKLNGML+NDKQV+VG F+ K +R+ K KF N++VKNL+ES +DE+L K+FGE+G TS V+MRDG+GKSKGFGFVNFEN+DDAA+AVDALNGK FDD+EW+VGKAQKKSERE ELK +FEQ++KE DK QG NLY+KNL +S+ D+KL+E F+ FGTITSCKVMRDPSG+S+GSGFVAFSTPEEA+RA+ EMNGKMIV+KPLYVA+AQRKE+R+ARLQAQFSQMRPV M P+V PRM MYPPG +GQQ YGQ PPA+I PQ GFGYQQQLVPGMRP G+PMPNFF+P++ QGQQ Q+ ++ + Q QQP P+M QM PRG YRYP R++ P +ML VP D+ G G+ RD+ QP+PI AL+T LANA+PEQQRT+LGE+LYPLVEQLE ++AAKVTGMLLEMDQTEVLHLLESPEALKAKV EAM+VLRSVAQQQA ADQLASLSL +N+V
Sbjct: 44 TTSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNELNFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETFSAFGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQVYVGPFVHKLQRDPSGEKVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGKSKGFGFVNFENSDDAARAVDALNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDPSGVSRGSGFVAFSTPEEATRAITEMNGKMIVTKPLYVALAQRKEDRKARLQAQFSQMRPVNMPPAVGPRMQMYPPGGPPMGQQLFYGQGPPAMI-PQPGFGYQQQLVPGMRPGGSPMPNFFMPMMQQGQQQQQQQQQQQRPGGGRRGALPQPQQPSPMMQQQMHPRGRMYRYPQ-RDVNTMPGP--TQNMLSVPYDVSSGGGVHHRDSPTSQPVPIVALATRLANAAPEQQRTMLGENLYPLVEQLEPESAAKVTGMLLEMDQTEVLHLLESPEALKAKVTEAMDVLRSVAQQQAGGAADQLASLSLGDNIV 670
BLAST of hap1-g6544.t2 vs. Araport11
Match: | (Symbols: PABP4, PAB4 | POLY(A) BINDING PROTEIN 4, poly(A) binding protein 4 | chr2:9943209-9946041 FORWARD LENGTH=662) HSP 1 Score: 803.127 bits (2073), Expect = 0.000e+0 Identity = 415/633 (65.56%), Postives = 495/633 (78.20%), Query Frame = 0 Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGSSGLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRPAGAPMPNFF-VPVVSQGQQGQRPGGRR-GAG-LVQQTQQPLPIMPHQMPPRGHAYRYPL-GRNMQDFPFDMGAGSMLPVPIDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQ--------QQANNQADQLASLSLNENL 650
SLYVGDLDFNVTDSQLYD F++V QV+SVRVCRD +T SLGYGYVNY+N DA +A+ LN++ LN K IRI YS RD S R+SG GN+F+KNLDKS+D+K LH+ FS G I+SCK+A D GQSRG+GFVQF+ ++SA+NAI+KLNG ++NDKQ+FVG FLRK+ERE+ A K KF N++VKNL+E+TTD++LK FG+YG+I+SAVVMRDGDGKS+ FGFVNFEN +DAA+AV+ALNGKKFDD+EWYVGKAQKKSERE EL ++EQ + +KF GLNLY+KNL D++ DEKL+ELF+EFGTITSCKVMRDPSG SKGSGFVAFS EASR L EMNGKM+ KPLYVA+AQRKEERRA+LQAQFSQMRP A P V PRMP++ G+ GLGQQ YGQ PP IIP Q GFGYQ QLVPGMRPA FF P++ GQQG RPGGRR G G + Q QQP+P M QM PRG YRYP GRNM D P G M+PV DM +P QPM L+T+LANA+P QQRTLLGESLYPLV+Q+E + AAKVTGMLLEMDQTEVLHLLESPEAL AKV+EA++VLR+V Q ++ + +D LASLS+N++L
Sbjct: 46 CSLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQKLNYSYLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLRKEERESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFENPEDAARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQRKEERRAKLQAQFSQMRP-AFIPGVGPRMPIFTGGAPGLGQQIFYGQGPPPIIPHQPGFGYQPQLVPGMRPA------FFGGPMMQPGQQGPRPGGRRSGDGPMRHQHQQPMPYMQPQMMPRGRGYRYPSGGRNMPDGPM---PGGMVPVAYDMNV-MP-----YSQPMSAGQLATSLANATPAQQRTLLGESLYPLVDQIESEHAAKVTGMLLEMDQTEVLHLLESPEALNAKVSEALDVLRNVNQPSSQGSEGNKSGSPSDLLASLSINDHL 662 HSP 2 Score: 56.9954 bits (136), Expect = 4.617e-8 Identity = 33/107 (30.84%), Postives = 60/107 (56.07%), Query Frame = 0 Query: 2 AQIQVQHQAQMSAPNGVAAGASGNQFLATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHR 108
AQ + + + ++S + GN+F +LYV +LD VTD +L +LF++ G + S +V RD S S G G+V ++ ++A+R L+ +N + K + + + R
Sbjct: 300 AQKKSERELELSRRYEQGSSDGGNKFDGLNLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSG-TSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQR 405
BLAST of hap1-g6544.t2 vs. Araport11
Match: | (Symbols: PAB5 | poly(A)-binding protein 5 | chr1:26990777-26993489 REVERSE LENGTH=682) HSP 1 Score: 612.453 bits (1578), Expect = 0.000e+0 Identity = 344/638 (53.92%), Postives = 446/638 (69.91%), Query Frame = 0 Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER---ETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR-PVAMGPSVPPRMP---MYPPGS--SGLGQQFLYGQAPPAIIPPQ-AGFGYQQQLVPGMRPAGAPMPNFFV--PVVSQGQQGQRPGGRRGAGLVQQTQQPLPIMPHQMPPRGHAYRYPLG----RNMQDFPFDMGAGSMLPVPIDMGA---GIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNQADQLASLSLNE 648
+SLYVGDLD +V +S L DLF+QV V ++RVCRDL T RSLGY YVN+ANP DA+RA++ LN+ P+ ++ IRIM S+RDPS R SG GN+FIKNLD SID+KAL++TFSSFG ILSCK+A D G+S+G+GFVQFE +E+AQ AIDKLNGML+NDKQVFVGHF+R+Q+R E+ A+ + F N++VKNL + TD++LKK FG+YG I+SAVVM+D G S+ FGFVNF + + AA AV+ +NG + YVG+AQKKS+RE+EL+ +FEQ +K QG NLY+KNL DS++DEKLKE+FSE+G +TSCKVM + G+S+G GFVA+S PEEA A+ EMNGKMI KPLYVA+AQRKEER+A LQ+ F+Q+R P M P VP M +PPG SG G ++P Q G+GYQ Q +PGMRP P PNF + P+ Q Q G R G RRGA +QQ Q Q + +A R+ G RN + G ++P+P++ A P+R + P+ I+ L++ LA ASP++ +LG+ LYPLVEQ E AAKVTGMLLEMDQ E+LHLLESPEALKAKV+EA++VLR A A + D +LS +E
Sbjct: 59 SSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPS-FTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSP-VPSPMSGFHHHPPGGPMSGPHHPMFIGHNGQGLVPSQPMGYGYQVQFMPGMRPGAGP-PNFMMPFPLQRQTQPGPRVGFRRGANNMQQQFQ------QQQMLQQNASRFMGGAGNRRNGMEASAPQG---IIPLPLNASANSHNAPQR-SHKPTPLTISKLASDLALASPDKHPRMLGDHLYPLVEQQEPANAAKVTGMLLEMDQAEILHLLESPEALKAKVSEALDVLRRSADPAAVSSVDDQFALSSSE 682
BLAST of hap1-g6544.t2 vs. Araport11
Match: | (Symbols: PAB5 | poly(A)-binding protein 5 | chr1:26990777-26993489 REVERSE LENGTH=682) HSP 1 Score: 612.453 bits (1578), Expect = 0.000e+0 Identity = 344/638 (53.92%), Postives = 446/638 (69.91%), Query Frame = 0 Query: 30 TSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER---ETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMR-PVAMGPSVPPRMP---MYPPGS--SGLGQQFLYGQAPPAIIPPQ-AGFGYQQQLVPGMRPAGAPMPNFFV--PVVSQGQQGQRPGGRRGAGLVQQTQQPLPIMPHQMPPRGHAYRYPLG----RNMQDFPFDMGAGSMLPVPIDMGA---GIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRSVAQQQANNQADQLASLSLNE 648
+SLYVGDLD +V +S L DLF+QV V ++RVCRDL T RSLGY YVN+ANP DA+RA++ LN+ P+ ++ IRIM S+RDPS R SG GN+FIKNLD SID+KAL++TFSSFG ILSCK+A D G+S+G+GFVQFE +E+AQ AIDKLNGML+NDKQVFVGHF+R+Q+R E+ A+ + F N++VKNL + TD++LKK FG+YG I+SAVVM+D G S+ FGFVNF + + AA AV+ +NG + YVG+AQKKS+RE+EL+ +FEQ +K QG NLY+KNL DS++DEKLKE+FSE+G +TSCKVM + G+S+G GFVA+S PEEA A+ EMNGKMI KPLYVA+AQRKEER+A LQ+ F+Q+R P M P VP M +PPG SG G ++P Q G+GYQ Q +PGMRP P PNF + P+ Q Q G R G RRGA +QQ Q Q + +A R+ G RN + G ++P+P++ A P+R + P+ I+ L++ LA ASP++ +LG+ LYPLVEQ E AAKVTGMLLEMDQ E+LHLLESPEALKAKV+EA++VLR A A + D +LS +E
Sbjct: 59 SSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDL-THRSLGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPS-FTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSP-VPSPMSGFHHHPPGGPMSGPHHPMFIGHNGQGLVPSQPMGYGYQVQFMPGMRPGAGP-PNFMMPFPLQRQTQPGPRVGFRRGANNMQQQFQ------QQQMLQQNASRFMGGAGNRRNGMEASAPQG---IIPLPLNASANSHNAPQR-SHKPTPLTISKLASDLALASPDKHPRMLGDHLYPLVEQQEPANAAKVTGMLLEMDQAEILHLLESPEALKAKVSEALDVLRRSADPAAVSSVDDQFALSSSE 682
BLAST of hap1-g6544.t2 vs. Araport11
Match: | (Symbols: PAB3, PABP3 | poly(A) binding protein 3 | chr1:8055599-8058799 FORWARD LENGTH=660) HSP 1 Score: 611.298 bits (1575), Expect = 0.000e+0 Identity = 340/633 (53.71%), Postives = 432/633 (68.25%), Query Frame = 0 Query: 2 AQIQVQHQAQMSAPNGVAAGASGNQFLATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGSSGLGQQFLYGQAPPAIIPPQ-AGFGYQQQLVPGMRPAGAPMPNFFV--PVVSQGQQGQRPGGRRGAGLVQQTQQPLPIMPHQMPPRGHAYRYPL--GRNMQDFPFDMGAGSMLPVPIDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLR 627
AQ VQ + P+ V + +SLY GDLD VT++ L+DLF V V+SVRVCRD RRSLGY Y+N++NP DA RA++ LN+TPL ++ IRIM S+RDPS R SG GNIFIKNLD SID+KAL +TFSSFG ILSCK+A D +G+S+G+GFVQFE +ESAQ AIDKLNGML+NDKQVFVGHF+R+QER + +F N++VKNL + +++L+K FG++G I+SAVVMRD G S+ FGFVNFE + AA AV+ +NG D YVG+AQKKSERE+EL+ +FEQ +K QG NLY+KNL DS+DDEKLKE+FSE+G +TS KVM +P G+S+G GFVA+S PEEA RAL+EMNGKMI KPLY+A+AQRKE+RRA LQA FSQ+R A GP + G Q GQ +++P Q G+G+Q Q +PGMRP P NF V P+ Q Q G R G RRGA VQQ Q +M H+ P G Y GRN D G + + I + A + +PI+ L+++LA+ASP + +LGE LYPLVE+ E AKVTGMLLEMDQ E+LHL+ESPEALK+KV+EA++VLR
Sbjct: 23 AQTSVQVPVSIPLPSPVVVADQTHP--NSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRD-QNRRSLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQRKEDRRAHLQALFSQIR--APGP-MSGFHHPPGGPMPGPPQHMYVGQNGASMVPSQPIGYGFQPQFMPGMRPGSGP-GNFIVPYPLQRQPQTGPRMGFRRGATNVQQHIQQQQLM-HRNPSPGMRYMNGASNGRNGMDSSVPQGILPPIIPLPIDASSISHQKAPL---LPISKLTSSLASASPADRTRMLGEQLYPLVERHEPLHVAKVTGMLLEMDQAEILHLMESPEALKSKVSEALDVLR 644
BLAST of hap1-g6544.t2 vs. Araport11
Match: | (Symbols: PAB7 | poly(A) binding protein 7 | chr2:15361476-15364398 REVERSE LENGTH=609) HSP 1 Score: 394.045 bits (1011), Expect = 6.047e-129 Identity = 235/606 (38.78%), Postives = 341/606 (56.27%), Query Frame = 0 Query: 28 LATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFS---QMRPVAMGPSVPPRMPMYPPGSSGLGQQFLYGQAPPAIIPPQAGFGYQQQLVPGMRPAGAPMPNFFVPVVSQGQQGQRPGGRRGAGLVQQTQQPLPIMPHQMPPRGHAYRY-PLGRNMQDF-PFDMGAGSMLPVPIDMGAGIPRRDASVGQPMPITALSTALANASPEQQRTLLGESLYPLVEQLERDAAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRS 628
+ SLYVGDL +VT+ LYD F++ + SVR+C+D S+ RSL YGY N+ + DA A++ N + LN K IR+M+S R P R++G GN+F+KNL +S+ + L D F FGNI+SCK+A G+SRG+GFVQFE +++A AI LN ++ DK+++VG F++K +R V + K+ N+++KNL +++ L++ F E+G I S + +D + +G+ FVNF+N +DA +A + +NG KF + YVG+AQKK+EREQ L+ QF++ +E + N+Y+KN+ ++ +E+L++ FS+ GTITS K+M D G SKG GFV FSTPEEA A+ +G+M KPLYVA+AQ+KE+R+ +LQ QF + R + SV P G P Y PGM P+ + G+ P M P + R L RN + P + MLP+ D R G+ M + E Q LLGE L+PLVE+LE A K+TGMLLEMD++E+L LL+SPE L +V EA EVL+S
Sbjct: 22 VTASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKKNNSLLNGKMIRVMWSVRAPDARRNGVGNVFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYVGKFMKKTDR--VKPEEKYTNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENRLCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVAIAQKKEDRKMQLQVQFGNRVEARKSSSSASVNP------------------GTYAPL---------YYTNTHPGMVYQSYPLM-------------WKSANMIGSSYPNSEAVTYPPMVANAPSKNRQNRIGKLDRNAVSYVPNVYQSTQMLPLSRDFSKQQHSRTYGRGKEMKKSIQQRQSETVGMEMQ--LLGELLHPLVEKLEPQLANKITGMLLEMDKSELLLLLKSPEDLAVRVDEAFEVLKS 583
BLAST of hap1-g6544.t2 vs. Araport11
Match: | (Symbols: PAB1 | poly(A) binding protein 1 | chr1:12433356-12434735 REVERSE LENGTH=407) HSP 1 Score: 357.836 bits (917), Expect = 1.062e-117 Identity = 188/393 (47.84%), Postives = 263/393 (66.92%), Query Frame = 0 Query: 88 LDVLNFTPLNNKSIRIMYSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFE-QAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQFSQMRPVAMGPSVPPRMPMYPPGSSGLGQQFLYGQ--APPAII---PPQAGFGYQQQLVPGMR-PAGAP---MPNFFVP 470
++VLN+ L K +RIM+S RDPS R SG GN+F+KNLD+SID+K L D FS+FG +LSCK+A D SG S+G+GFVQF + S A + NG LI ++ + V F+ + + + + F N++VKNL E+ TD DLK++FGE+G ITSAVVM+DG+GKS+ FGFVNFE A+ A A++ +NG D++E +VG+AQ+K+ R ++LK +FE + + + +G+NLY+KNL DS+D+ KL+ELFSEFGTITSCKVM +GISKG GFV FST EEAS+A+ +MNGKM+ +KP+YV++AQ KE+ + LQ QF+ PP P QQ ++ Q AP ++ P G+ +Q + G R P P +PNF VP
Sbjct: 1 MEVLNYCKLKGKPMRIMFSERDPSNRMSGRGNVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASGVSKGYGFVQFYSDLSVYTACNFHNGTLIRNQHIHVCPFVSRGQWDKSRV---FTNVYVKNLVETATDADLKRLFGEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKMNGVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVDNTKLEELFSEFGTITSCKVMVHSNGISKGVGFVEFSTSEEASKAMLKMNGKMVGNKPIYVSLAQCKEQHKLHLQTQFNN----------PPPSP---------HQQPIFSQVVAPATMLSQQTPLRGYNFQPYSMCGSRMPNSCPPISIPNFMVP 371 HSP 2 Score: 175.252 bits (443), Expect = 2.224e-48 Identity = 103/283 (36.40%), Postives = 160/283 (56.54%), Query Frame = 0 Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIM-YSHRDPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN--------------NIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQF 298
+++V +LD ++ + QL D+FS G+VLS +V RD S S GYG+V + + A + N T + N+ I + + R + N+++KNL ++ L F FG I S + DG G+SR FGFV FE E+A AI+K+NG+++++K++ VG RK R T +K KF N++VKNL +S + L+++F E+GTITS VM +G SKG GFV F +++A+KA+ +NGK ++ YV AQ K + + L+ QF
Sbjct: 32 NVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASG-VSKGYGFVQFYSDLSVYTACNFHNGTLIRNQHIHVCPFVSRGQWDKSRVFTNVYVKNLVETATDADLKRLFGEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKMNGVVVDEKELHVGRAQRKTNR-TEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVDNTKLEELFSEFGTITSCKVMVHSNGISKGVGFVEFSTSEEASKAMLKMNGKMVGNKPIYVSLAQCKEQHKLHLQTQF 312 HSP 3 Score: 104.375 bits (259), Expect = 1.231e-23 Identity = 63/210 (30.00%), Postives = 110/210 (52.38%), Query Frame = 0 Query: 18 VAAGASGNQFLATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPS--------------IRKSGTG---NIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNN 210
V+ G + T++YV +L TD+ L LF + G++ S V +D +S +G+VN+ A A++ +N ++ K + + + R + IR T N+++KNLD S+D+ L + FS FG I SCK+ +G S+G GFV+F E A A+ K+NG ++ +K ++V + +E+ + ++T+FNN
Sbjct: 107 VSRGQWDKSRVFTNVYVKNLVETATDADLKRLFGEFGEITSAVVMKD-GEGKSRRFGFVNFEKAEAAVTAIEKMNGVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVDNTKLEELFSEFGTITSCKVMVHSNGISKGVGFVEFSTSEEASKAMLKMNGKMVGNKPIYVS-LAQCKEQHKLHLQTQFNN 314
BLAST of hap1-g6544.t2 vs. Araport11
Match: | (Symbols: PAB6 | poly(A) binding protein 6 | chr3:5558676-5560993 REVERSE LENGTH=537) HSP 1 Score: 328.176 bits (840), Expect = 1.740e-104 Identity = 179/413 (43.34%), Postives = 261/413 (63.20%), Query Frame = 0 Query: 31 SLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSIRIMYSHRDPSIRK---SGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNIFVKNLAESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKGFGFVNFENADDAAKAVDALNGKKFDDREWYVGKAQKKSEREQELKGQFEQAMKETVDKFQGLNLYIKNLGDSIDDEKLKELFSEFGTITSCKVMRDPSGISKGSGFVAFSTPEEASRALAEMNGKMIVSKPLYVAVAQRKEERRARLQAQF-SQMRPVAMGPSVP-PRMPM--YPPGSSGLGQQFLYGQA 436
SLYVGDL +VT+ L D FS V+SV +CR+ T +S+ Y Y+N+ +P A+ A+ LN + L K++RIM+S RD + R+ +G N+++KNLD SI L F FG+ILSCK+ + +GQS+GFGFVQF+ ++SA +A L+G ++ K++FV F+ K ER +A N++VKNL E+ TD+ L +F +YGT++S VVMRDG G+S+GFGFVNF N ++A KA+++L G + ++ +VGKA KK ER + LK +F + + NLY+KNL +S+++ +L+E+F +G I S KVM +G SKG GFV FS EE+ +A +NG ++ KP+ V VA+RKE+R RLQ F +Q R PS P P P+ Y S G Q F G +
Sbjct: 22 SLYVGDLSPDVTEKDLIDKFSLNVPVVSVHLCRNSVTGKSMCYAYINFDSPFSASNAMTRLNHSDLKGKAMRIMWSQRDLAYRRRTRTGFANLYVKNLDSSITSSCLERMFCPFGSILSCKVVEE-NGQSKGFGFVQFDTEQSAVSARSALHGSMVYGKKLFVAKFINKDERAAMAGNQDSTNVYVKNLIETVTDDCLHTLFSQYGTVSSVVVMRDGMGRSRGFGFVNFCNPENAKKAMESLCGLQLGSKKLFVGKALKKDERREMLKQKFSDNFIAKPN-MRWSNLYVKNLSESMNETRLREIFGCYGQIVSAKVMCHENGRSKGFGFVCFSNCEESKQAKRYLNGFLVDGKPIVVRVAERKEDRIKRLQQYFQAQPRQYTQAPSAPSPAQPVLSYVSSSYGCFQPFQVGTS 432 HSP 2 Score: 111.309 bits (277), Expect = 2.138e-25 Identity = 72/198 (36.36%), Postives = 110/198 (55.56%), Query Frame = 0 Query: 20 AGASGNQFLATSLYVGDLDFNVTDSQLYDLFSQVGQVLSVRVCRDLSTRRSLGYGYVNYANPADAARALDVLNFTPLNNKSI-----------RIMYSHR-------DPSIRKSGTGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIAADGSGQSRGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 199
A +GNQ +T++YV +L VTD L+ LFSQ G V SV V RD RS G+G+VN+ NP +A +A++ L L +K + R M + P++R S N+++KNL +S++ L + F +G I+S K+ +G+S+GFGFV F N E ++ A LNG L++ K + V RK++R
Sbjct: 193 AAMAGNQ-DSTNVYVKNLIETVTDDCLHTLFSQYGTVSSVVVMRD-GMGRSRGFGFVNFCNPENAKKAMESLCGLQLGSKKLFVGKALKKDERREMLKQKFSDNFIAKPNMRWS---NLYVKNLSESMNETRLREIFGCYGQIVSAKVMCHENGRSKGFGFVCFSNCEESKQAKRYLNGFLVDGKPIVVRVAERKEDR 385 The following BLAST results are available for this feature:
BLAST of hap1-g6544.t2 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of hap1-g6544.t2 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of hap1-g6544.t2 vs. Araport11
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus garrawayi UQ v1.0 proteins
Date Performed: 2024-10-02 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >hap1-g6544.t2_Cgarrawayi-UQ_v1 ID=hap1-g6544.t2_Cgarrawayi-UQ_v1; Name=hap1-g6544.t2; organism=Citrus garrawayi; type=mRNA; length=1959bpback to top protein sequence of hap1-g6544.t2_Cgarrawayi-UQ_v1 >hap1-g6544.t2_Cgarrawayi-UQ_v1 ID=hap1-g6544.t2_Cgarrawayi-UQ_v1; Name=hap1-g6544.t2_Cgarrawayi-UQ_v1; organism=Citrus garrawayi; type=polypeptide; length=653bpback to top mRNA from alignment at hap1-C.garr_03:3262782..3266074- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=3293bp; location=Sequence derived from: hap1-C.garr_03:3262782..3266074- (Citrus garrawayiback to top Coding sequence (CDS) from alignment at hap1-C.garr_03:3262782..3266074- >hap1-g6544.t2_Cgarrawayi-UQ_v1 ID=hap1-g6544.t2_Cgarrawayi-UQ_v1; Name=hap1-g6544.t2; organism=Citrus garrawayi; type=CDS; length=1959bp; location=Sequence derived from: hap1-C.garr_03:3262782..3266074- (Citrus garrawayiback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|