hap1-g6777.t2
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of hap1-g6777.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2H5Q0E3|A0A2H5Q0E3_CITUN (VQ domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_184580 PE=4 SV=1) HSP 1 Score: 489.96 bits (1260), Expect = 8.025e-174 Identity = 252/266 (94.74%), Postives = 253/266 (95.11%), Query Frame = 0 Query: 1 MDSSSDFPVSKSPRRELQGPRPAPLKVRKDSYKIKKPPVAPPSQQQQQQQQHHHHHHQAPAPPPRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSSSTTTTRT--SFTSSKTVASSSSYDPLGDSTGAISPAARYASIEKAKQHSPSKKLIQSHHQY----HNHTHSHSHNEDYHGHTNNNDRNMATGGGFVEGIEMDHNIERSSLFPGILSPGPTSLPMIPPSFFSPPSDPNSFSFLYDLSPVLHGNKNFFEGSFMPSPSGL 260 MDSSSDFPVSKSPRRELQGPRPAPLKVRKDSYKIKKPPVAPPSQQQQQQQ HHHHHQAPAPPPRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSS+TTTT T SFTSSKTVASSSSYDPLGDSTGAISPAARYASIEKAKQHSPSKKLIQSHHQY HNH HSHSHNEDYHGHTNNND NMATGGGFVEGIEMDHNIERSSLFPGILSPGPTSLPMIPPSFFSPPSDPNSFSFLYDLSPVLHGNKNF EGSFMPSPSG Sbjct: 1 MDSSSDFPVSKSPRRELQGPRPAPLKVRKDSYKIKKPPVAPPSQQQQQQQ--HHHHHQAPAPPPRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSSTTTTTTTTTSFTSSKTVASSSSYDPLGDSTGAISPAARYASIEKAKQHSPSKKLIQSHHQYRNHNHNHNHSHSHNEDYHGHTNNNDSNMATGGGFVEGIEMDHNIERSSLFPGILSPGPTSLPMIPPSFFSPPSDPNSFSFLYDLSPVLHGNKNFIEGSFMPSPSGF 264
BLAST of hap1-g6777.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A067GVC1|A0A067GVC1_CITSI (VQ domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g045610mg PE=4 SV=1) HSP 1 Score: 489.96 bits (1260), Expect = 8.025e-174 Identity = 252/266 (94.74%), Postives = 253/266 (95.11%), Query Frame = 0 Query: 1 MDSSSDFPVSKSPRRELQGPRPAPLKVRKDSYKIKKPPVAPPSQQQQQQQQHHHHHHQAPAPPPRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSSSTTTTRT--SFTSSKTVASSSSYDPLGDSTGAISPAARYASIEKAKQHSPSKKLIQSHHQY----HNHTHSHSHNEDYHGHTNNNDRNMATGGGFVEGIEMDHNIERSSLFPGILSPGPTSLPMIPPSFFSPPSDPNSFSFLYDLSPVLHGNKNFFEGSFMPSPSGL 260 MDSSSDFPVSKSPRRELQGPRPAPLKVRKDSYKIKKPPVAPPSQQQQQQQ HHHHHQAPAPPPRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSS+TTTT T SFTSSKTVASSSSYDPLGDSTGAISPAARYASIEKAKQHSPSKKLIQSHHQY HNH HSHSHNEDYHGHTNNND NMATGGGFVEGIEMDHNIERSSLFPGILSPGPTSLPMIPPSFFSPPSDPNSFSFLYDLSPVLHGNKNF EGSFMPSPSG Sbjct: 1 MDSSSDFPVSKSPRRELQGPRPAPLKVRKDSYKIKKPPVAPPSQQQQQQQ--HHHHHQAPAPPPRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSSTTTTTTTTTSFTSSKTVASSSSYDPLGDSTGAISPAARYASIEKAKQHSPSKKLIQSHHQYRNHNHNHNHSHSHNEDYHGHTNNNDSNMATGGGFVEGIEMDHNIERSSLFPGILSPGPTSLPMIPPSFFSPPSDPNSFSFLYDLSPVLHGNKNFIEGSFMPSPSGF 264
BLAST of hap1-g6777.t2 vs. ExPASy TrEMBL (2024)
Match: tr|V4T881|V4T881_CITCL (VQ domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10002106mg PE=4 SV=1) HSP 1 Score: 489.189 bits (1258), Expect = 1.632e-173 Identity = 251/261 (96.17%), Postives = 252/261 (96.55%), Query Frame = 0 Query: 1 MDSSSDFPVSKSPRRELQGPRPAPLKVRKDSYKIKKPPVAPPSQQQQQQQQHHHHHHQAPAPPPRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSSSTTTTRT-SFTSSKTVASSSSYDPLGDSTGAISPAARYASIEKAKQHSPSKKLIQSHHQYHNHTHSHSHNEDYHGHTNNNDRNMATGGGFVEGIEMDHNIERSSLFPGILSPGPTSLPMIPPSFFSPPSDPNSFSFLYDLSPVLHGNKNFFEGSFMPSPSGL 260 MDSSSDFPVSKSPRRELQGPRPAPLKVRKDSYKIKKPPVAPPSQQQQQQQ HHHHHQAPAPPPRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSS+TTTT T SFTSSKTVASSSSYDPLGDSTGAISPAARYASIEKAKQHSPSKKLIQSHHQYHNH SHSHNEDYHGHTNNND NMATGGGFVEGIEMDHNIERSSLFPGILSPGPTSLPMIPPSFFSPPSDPNSFSFLYDLSPVLHGNKNF EGSFMPSPSG Sbjct: 1 MDSSSDFPVSKSPRRELQGPRPAPLKVRKDSYKIKKPPVAPPSQQQQQQQ--HHHHHQAPAPPPRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSSTTTTTTTTSFTSSKTVASSSSYDPLGDSTGAISPAARYASIEKAKQHSPSKKLIQSHHQYHNH--SHSHNEDYHGHTNNNDSNMATGGGFVEGIEMDHNIERSSLFPGILSPGPTSLPMIPPSFFSPPSDPNSFSFLYDLSPVLHGNKNFIEGSFMPSPSGF 257
BLAST of hap1-g6777.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5C7HA19|A0A5C7HA19_9ROSI (VQ domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_022504 PE=4 SV=1) HSP 1 Score: 253.447 bits (646), Expect = 3.675e-81 Identity = 165/265 (62.26%), Postives = 174/265 (65.66%), Query Frame = 0 Query: 1 MDSSSDFPVSKSPRRELQGPRPAPLKVRKDSYKIKKPPVAPPSQQQQQQQQHHHHHHQAPAPPPRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSSSTTTTRTSFTSSKTVASSSSYDPLGDSTGAISPAARYASIEKAKQHSPSK---KLIQSHHQYHNHTHSHSHNEDYHGHTNNNDRNMATGGGFVEGIEMDHNI--ERSSLFPGILSPGPTSLPMIPPSFFSPPSDPNSFSFLYDLSPVLHGNKNFFEGSFMPSPSGL 260 MDSS DFPVSKSPRRELQGPRPAPLKVRK+SYKIKKPPVAP Q Q P R PVIIYTVSPKVIHTNP+DFMTLVQRLTGSSSSS + +YD TGAISPAARYASIEK K SP K +L+QS + D NM GFVEGIEMDHNI ERSSLFPGILSPGPTSLP I PSFFSP SDPN SF +DLSPV+HGNKNF EGSFMPSPS Sbjct: 1 MDSS-DFPVSKSPRRELQGPRPAPLKVRKESYKIKKPPVAP-------QLSMQPPRQQQPPAQLRPPVIIYTVSPKVIHTNPSDFMTLVQRLTGSSSSSQSHQHD---------HRQLNYD--YHHTGAISPAARYASIEKTKSTSPEKNKKQLLQS----------------------SEDENM----GFVEGIEMDHNINIERSSLFPGILSPGPTSLPAISPSFFSPASDPNMISFFHDLSPVMHGNKNFIEGSFMPSPSSF 220
BLAST of hap1-g6777.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1R3GBB7|A0A1R3GBB7_9ROSI (VQ motif-containing protein OS=Corchorus olitorius OX=93759 GN=COLO4_36019 PE=4 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 1.151e-73 Identity = 152/260 (58.46%), Postives = 174/260 (66.92%), Query Frame = 0 Query: 1 MDSSSDFPVSKSPRRELQGPRPAPLKVRKDSYKIKKPPVAPPSQQQQQQQQHHHHHHQAPAPPPRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSSSTTTTRTSFTSSKTVASSSSYDPLGDSTGAISPAARYASIEKAKQHSPSKKLIQSHHQYHNHTHSHSHNEDYHGHTNNNDRNMATGGGFVEGIEMDHNIERSSLFPGILSPGPTSLPMIPPSFFSPPSDPNSFSFLYDLSPVLHGNKNFFEGSFMPSPSGL 260 MDSS DFP+SKSPR+ELQGPRPAPLKVRKDSYKIKKPP+AP QQQ Q R PVIIYTVSPKVIHTNP++FM LVQRLTGS+SSSS+++ T P +S+GAISPAAR+A+IEK + SP K N S E+ N+ GFV+GIEM+H +ER+S PGILSPGPTSLP I P+FFSPPSDPN SF +DLSPVLHGNKNF EGSFMPSPSG Sbjct: 1 MDSS-DFPISKSPRKELQGPRPAPLKVRKDSYKIKKPPLAPQPVVQQQPTQI------------RPPVIIYTVSPKVIHTNPSEFMNLVQRLTGSTSSSSSSSISTY--------------PFQESSGAISPAARFATIEKTR--SPEGK---------NQQIVISEEEN----------NL----GFVQGIEMNHGVERTSFLPGILSPGPTSLPPISPNFFSPPSDPNLISFFHDLSPVLHGNKNFIEGSFMPSPSGF 208
BLAST of hap1-g6777.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1R3J1D1|A0A1R3J1D1_COCAP (VQ motif-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_08292 PE=4 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 7.835e-73 Identity = 150/260 (57.69%), Postives = 176/260 (67.69%), Query Frame = 0 Query: 1 MDSSSDFPVSKSPRRELQGPRPAPLKVRKDSYKIKKPPVAPPSQQQQQQQQHHHHHHQAPAPPPRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSSSTTTTRTSFTSSKTVASSSSYDPLGDSTGAISPAARYASIEKAKQHSPSKKLIQSHHQYHNHTHSHSHNEDYHGHTNNNDRNMATGGGFVEGIEMDHNIERSSLFPGILSPGPTSLPMIPPSFFSPPSDPNSFSFLYDLSPVLHGNKNFFEGSFMPSPSGL 260 MDSS DFP+SKSPR+ELQGPRPAPLKVRKDSYKIKKPP+AP QQQ Q R PVIIYTVSPKVIHTNP++FM LVQRLTGS+SSSS++++ ++ P +S+GAISPAAR+A+IEK + SP K N S E+ N+ GFV+GIEM+H +ER+S PGILSPGP+SLP I P+FFSPPSDPN SF +DLSPVLHGNKNF EGSFMPSPSG Sbjct: 1 MDSS-DFPISKSPRKELQGPRPAPLKVRKDSYKIKKPPLAPQPVVQQQPTQI------------RPPVIIYTVSPKVIHTNPSEFMNLVQRLTGSTSSSSSSSSTST-------------HPFQESSGAISPAARFATIEKTR--SPEGK---------NQQIIISEEEN----------NL----GFVQGIEMNHGVERTSFLPGILSPGPSSLPPISPNFFSPPSDPNLISFFHDLSPVLHGNKNFIEGSFMPSPSGF 209
BLAST of hap1-g6777.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8T2YV78|A0A8T2YV78_POPDE (VQ domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_010975 PE=4 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 3.258e-72 Identity = 150/265 (56.60%), Postives = 175/265 (66.04%), Query Frame = 0 Query: 1 MDSSSDFPVSKSPRRELQGPRPAPLKVRKDSYKIKKPPVAP-PSQQQQQQQQHHHHHHQAPAPPPRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSSSTTTTRTSFTSSKTVASSSSYDPLGD-STGAISPAARYASIEKAKQHSPSKKLIQSHHQYHNHTHSHSHNEDYHGHTNNNDRNMATGGGFVEGI-EMDHNIERSSLFPGILSPGPTSLPMIPPSFFSPPS-DPNSFSFLYDLSPVLHGNKNFFEGSFMPSPSGLW 261 MDSS DFP+S+SPR+ELQGPRP LK+RKDS+KIKKPPVAP PS + Q QQ PR PVIIYT+SPKVIHTNPNDFMTLVQRLTGSSS+S+ ++T S+S +P D GAISPAARYA+IEKAK SP +L Q + GFVEGI E+D +ER++L PGILSPGP SLP IPP+FFSP S DPNS SF +DLSP+LHGN+NF EGSFMPSPS + Sbjct: 1 MDSS-DFPISRSPRKELQGPRPPALKIRKDSHKIKKPPVAPQPSHHKPQNQQQTQ---------PRPPVIIYTLSPKVIHTNPNDFMTLVQRLTGSSSTSTCSST------------STSSNPFNDHDCGAISPAARYATIEKAK--SPKDQLKQQ---------------------------LGGDVGFVEGIMEIDQVMERTNLGPGILSPGPASLPPIPPNFFSPASADPNSVSFFHDLSPILHGNRNFIEGSFMPSPSTFF 214
BLAST of hap1-g6777.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9D4AFY0|A0A9D4AFY0_9ROSI (VQ domain-containing protein OS=Gossypium stocksii OX=47602 GN=J1N35_007811 PE=4 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 4.247e-71 Identity = 148/260 (56.92%), Postives = 174/260 (66.92%), Query Frame = 0 Query: 1 MDSSSDFPVSKSPRRELQGPRPAPLKVRKDSYKIKKPPVAPPSQQQQQQQQHHHHHHQAPAPPPRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSSSTTTTRTSFTSSKTVASSSSYDPLGDSTGAISPAARYASIEKAKQHSPSKKLIQSHHQYHNHTHSHSHNEDYHGHTNNNDRNMATGGGFVEGIEMDHNIERSSLFPGILSPGPTSLPMIPPSFFSPPSDPNSFSFLYDLSPVLHGNKNFFEGSFMPSPSGL 260 MDSS DFP S+SPR+ELQGPRPAPLKVRKDSYKIKKPP+AP QQQ QQ R PVIIYTVSPKVIHTNP+DFM LVQRLTG +SSSS+ ++ ++S S + ++GAISPAAR+A+IEK K + K+ + E+Y GFV+GIEM+ +ER+SLFPGILSPGPTSLP I P+FFSPPSDPNS F +DLSPVLHGN+NF EGSFMPSPSG Sbjct: 1 MDSS-DFPTSRSPRKELQGPRPAPLKVRKDSYKIKKPPLAPQPLLQQQHQQQPIQI--------RPPVIIYTVSPKVIHTNPSDFMNLVQRLTGPTSSSSSGSSTLPPSTSDHPIFSDT------TSGAISPAARFATIEKTKPPAKGKR-------------QQIYEENY---------------GFVQGIEMNPGVERTSLFPGILSPGPTSLPRISPNFFSPPSDPNSIGFFHDLSPVLHGNRNFIEGSFMPSPSGF 217
BLAST of hap1-g6777.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A9W7LTW5|A0A9W7LTW5_HIBTR (VQ domain-containing protein OS=Hibiscus trionum OX=183268 GN=HRI_001378200 PE=4 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 3.151e-69 Identity = 143/257 (55.64%), Postives = 162/257 (63.04%), Query Frame = 0 Query: 4 SSDFPVSKSPRRELQGPRPAPLKVRKDSYKIKKPPVAPPSQQQQQQQQHHHHHHQAPAPPPRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSSSTTTTRTSFTSSKTVASSSSYDPLGDSTGAISPAARYASIEKAKQHSPSKKLIQSHHQYHNHTHSHSHNEDYHGHTNNNDRNMATGGGFVEGIEMDHNIERSSLFPGILSPGPTSLPMIPPSFFSPPSDPNSFSFLYDLSPVLHGNKNFFEGSFMPSPSGL 260 SSDFP ++SPR+ELQGPRPAPLKVRKDSYKIKKPP+AP QQQQQ VIIYTVSPKVIHTNP+DFM LVQRLTGS+S+SS+ + TSS GAISPAAR+A+IEK K + KK + E+Y GFVEG+EMD +ER+S PGILSPGPTSLP I PSFFSP SDPNS F +DLSPVLHGN+NF EGSFMPSPS Sbjct: 3 SSDFPTNRSPRKELQGPRPAPLKVRKDSYKIKKPPLAPQPLHHQQQQQPAQIRPP---------VIIYTVSPKVIHTNPSDFMNLVQRLTGSTSTSSSDHPIFNDTSS----------------GAISPAARFAAIEKTKPPAEGKK-------------QQIYEENY---------------GFVEGMEMDSGVERASFLPGILSPGPTSLPRISPSFFSPTSDPNSIGFFHDLSPVLHGNRNFIEGSFMPSPSSF 206
BLAST of hap1-g6777.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6P5ZMW5|A0A6P5ZMW5_DURZI (Nuclear speckle RNA-binding protein B-like OS=Durio zibethinus OX=66656 GN=LOC111301972 PE=4 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 5.541e-69 Identity = 143/258 (55.43%), Postives = 167/258 (64.73%), Query Frame = 0 Query: 3 SSSDFPVSKSPRRELQGPRPAPLKVRKDSYKIKKPPVAPPSQQQQQQQQHHHHHHQAPAPPPRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSSSTTTTRTSFTSSKTVASSSSYDPLGDSTGAISPAARYASIEKAKQHSPSKKLIQSHHQYHNHTHSHSHNEDYHGHTNNNDRNMATGGGFVEGIEMDHNIERSSLFPGILSPGPTSLPMIPPSFFSPPSDPNSFSFLYDLSPVLHGNKNFFEGSFMPSPSGL 260 +SSDFP SKSPR+ELQGPRPAPLKVRKDSYKIKKPP+AP QQQ Q IIYTVSPKVIHTNP+DFM LVQRLTGS+SSSS + + TS+ +++ D++GAISPAAR+A+IEK K K+ I E++ G V+GIEM+ +ER+S FPGILSPGPTSLP I P+FFSPPSDPN FSF DLSPVLHGN+NF EGSFMPSPS Sbjct: 2 NSSDFPASKSPRKELQGPRPAPLKVRKDSYKIKKPPLAPQPVQQQPVQVRPPV-------------IIYTVSPKVIHTNPSDFMNLVQRLTGSTSSSSGSLSLPPSTSNHPISN--------DTSGAISPAARFATIEKTKSPEWKKQQISE--------------ENF---------------GLVQGIEMNPGVERTSFFPGILSPGPTSLPPISPNFFSPPSDPNLFSFFRDLSPVLHGNRNFIEGSFMPSPSSF 209
BLAST of hap1-g6777.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|F4HWF9|NSRB_ARATH (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.538e-19 Identity = 91/227 (40.09%), Postives = 119/227 (52.42%), Query Frame = 0 Query: 10 SKSPR-RELQGPRPAPLKVRKDSYKIKKPPVAPPSQQQQQQQQHHHHHHQAPAPPPRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSSSTTTTRTSFTSSKTVASSSSYDPLGDSTGAISPAARYASIEKAKQHSPSKKLIQSH---HQYHNHTHSHSHNEDYHGHTNNNDRNMATGGGFVEGIEMDHNIERSSL-FPGILSPGPTSLPMIPPSFFSP--PSDP 229 ++SPR R GP+P PLKVR DS+KI K P P Q Q Q H PPP PV IYTV+P++IHT+PN+FMTLVQRLTG +S+S+T+++ +S TS S+ + S G ISPAAR+A EKA + + QY++H H ++ + ER S GILSPGP SLP + P FFS P+DP Sbjct: 3 NRSPRSRGNMGPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPP-GPVNIYTVTPRIIHTHPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKDTSTM----VDTSHGLISPAARFAVTEKANISNELGTFVGGEGTMDQYYHHHHQEQPHQ-------------------------NRGFERPSFHHAGILSPGPYSLPSVSPDFFSTIGPTDP 199
BLAST of hap1-g6777.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8LGD5|MKS1_ARATH (Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 1.216e-12 Identity = 75/218 (34.40%), Postives = 95/218 (43.58%), Query Frame = 0 Query: 14 RRELQ--GPRPAPLKVRKDSYKIKKPPVAPPSQQQQQQQQHHHHHHQAPAPPPRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSSSTTTTRTSFTSSKTVASSSSYDPLGDSTGAISPAARYASIEKAKQHSPSKKLIQSHHQYHNHTHSHSHNEDYHGHTNNNDRNMATGGGFVEGIEMDHNIERSSLF----PGILSPGPTSLPMIPPSFFSP 225 +R+LQ GPRP+PL V KDS+KIKKPP P + Q + PR+PV+IY VSPKV+H ++FM +VQRLTG SS F S G +SPAAR AS E A SP G R+ E +E++ +E ++ F PGILSP P LP FSP Sbjct: 19 KRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPYI---------PREPVVIYAVSPKVVHATASEFMNVVQRLTGISSGV--------FLES-------------GGGGDVSPAARLASTENA---SP------------------------RGGKEPAARD--------ETVEINTAMEEAAEFGGYAPGILSPSPALLPTASTGIFSP 171
BLAST of hap1-g6777.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LS54|VQ20_ARATH (VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 5.928e-8 Identity = 27/53 (50.94%), Postives = 33/53 (62.26%), Query Frame = 0 Query: 64 PRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSSSTTTTRTSFTSSKTVAS 116 PR PVIIYT +P++IHTNP DFM LVQ+LTG + S + T V S Sbjct: 70 PRHPVIIYTHTPRIIHTNPKDFMALVQKLTGMTHSDEDLGGGNAMTDPGVVKS 122
BLAST of hap1-g6777.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9CA36|VQ8_ARATH (VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VQ8 PE=1 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 1.191e-7 Identity = 35/80 (43.75%), Postives = 40/80 (50.00%), Query Frame = 0 Query: 16 ELQGPRPAPLKVRKDSYKIKKPPVAPPSQQQQQQQQHHHHHHQAPAPPPRQ-PVIIYTVSPKVIHTNPNDFMTLVQRLTG 94 E+ G RP+ LK+ +S+ IKK P P R PVIIY SPKVIHT DFM LVQRLTG Sbjct: 8 EINGSRPSSLKLAGESHTIKKTSSC----------------KSKPRPHGRASPVIIYAHSPKVIHTRAEDFMALVQRLTG 71
BLAST of hap1-g6777.t2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:7469002-7469721 REVERSE LENGTH=239) HSP 1 Score: 106.301 bits (264), Expect = 1.764e-27 Identity = 102/239 (42.68%), Postives = 129/239 (53.97%), Query Frame = 0 Query: 10 SKSPR-RELQGPRPAPLKVRKDSYKIKKPPVAPPSQQQQQQQQHHHHHHQAPAPPPRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSSSTTTTRTSFTSSKTVASSSSYDPLGDSTGAISPAARYASIEKAKQHSPSKKLIQSHHQYHNHTHSHSHNEDYHGHTNNNDRNMATGGGFVEGIEMDHNIERSSL-FPGILSPGPTSLPMIPPSFFSP--PSDPNSF-SFLYDLSPVLH 243 ++SPR R + GPRP PLKVR DS+KI K P P Q Q Q H PPP PVIIYTVSP++IHT+PN+FMTLVQRLTG +S+S+T+++ +S TS+ AS+ + S G ISPAAR+A EKA + + + H H H+ N GF ER S GILSPGP SLP + P FFS P+DP F SF D + +L Sbjct: 3 NRSPRSRGILGPRPIPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPP-GPVIIYTVSPRIIHTHPNNFMTLVQRLTGKTSTSTTSSSYSSSTSAPKDASTM----VDTSHGLISPAARFAVTEKANISNELGTFVGGEGTMDQYYHYHHHHHHQEQQHQNQ--------GF----------ERPSFHHAGILSPGPNSLPSVSPDFFSTIGPTDPQGFSSFFNDFNSILQ 218
BLAST of hap1-g6777.t2 vs. Araport11
Match: | (Symbols: NSRb | | chr1:7462834-7465200 REVERSE LENGTH=421) HSP 1 Score: 90.5077 bits (223), Expect = 1.447e-20 Identity = 91/227 (40.09%), Postives = 119/227 (52.42%), Query Frame = 0 Query: 10 SKSPR-RELQGPRPAPLKVRKDSYKIKKPPVAPPSQQQQQQQQHHHHHHQAPAPPPRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSSSTTTTRTSFTSSKTVASSSSYDPLGDSTGAISPAARYASIEKAKQHSPSKKLIQSH---HQYHNHTHSHSHNEDYHGHTNNNDRNMATGGGFVEGIEMDHNIERSSL-FPGILSPGPTSLPMIPPSFFSP--PSDP 229 ++SPR R GP+P PLKVR DS+KI K P P Q Q Q H PPP PV IYTV+P++IHT+PN+FMTLVQRLTG +S+S+T+++ +S TS S+ + S G ISPAAR+A EKA + + QY++H H ++ + ER S GILSPGP SLP + P FFS P+DP Sbjct: 3 NRSPRSRGNMGPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPP-GPVNIYTVTPRIIHTHPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKDTSTM----VDTSHGLISPAARFAVTEKANISNELGTFVGGEGTMDQYYHHHHQEQPHQ-------------------------NRGFERPSFHHAGILSPGPYSLPSVSPDFFSTIGPTDP 199
BLAST of hap1-g6777.t2 vs. Araport11
Match: | (Symbols: NSRb | | chr1:7463411-7465200 REVERSE LENGTH=358) HSP 1 Score: 89.7373 bits (221), Expect = 1.620e-20 Identity = 91/227 (40.09%), Postives = 119/227 (52.42%), Query Frame = 0 Query: 10 SKSPR-RELQGPRPAPLKVRKDSYKIKKPPVAPPSQQQQQQQQHHHHHHQAPAPPPRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSSSTTTTRTSFTSSKTVASSSSYDPLGDSTGAISPAARYASIEKAKQHSPSKKLIQSH---HQYHNHTHSHSHNEDYHGHTNNNDRNMATGGGFVEGIEMDHNIERSSL-FPGILSPGPTSLPMIPPSFFSP--PSDP 229 ++SPR R GP+P PLKVR DS+KI K P P Q Q Q H PPP PV IYTV+P++IHT+PN+FMTLVQRLTG +S+S+T+++ +S TS S+ + S G ISPAAR+A EKA + + QY++H H ++ + ER S GILSPGP SLP + P FFS P+DP Sbjct: 3 NRSPRSRGNMGPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPP-GPVNIYTVTPRIIHTHPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKDTSTM----VDTSHGLISPAARFAVTEKANISNELGTFVGGEGTMDQYYHHHHQEQPHQ-------------------------NRGFERPSFHHAGILSPGPYSLPSVSPDFFSTIGPTDP 199
BLAST of hap1-g6777.t2 vs. Araport11
Match: | (Symbols: MKS1 | MAP kinase substrate 1 | chr3:6429755-6430423 REVERSE LENGTH=222) HSP 1 Score: 68.5514 bits (166), Expect = 1.247e-13 Identity = 75/218 (34.40%), Postives = 95/218 (43.58%), Query Frame = 0 Query: 14 RRELQ--GPRPAPLKVRKDSYKIKKPPVAPPSQQQQQQQQHHHHHHQAPAPPPRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSSSTTTTRTSFTSSKTVASSSSYDPLGDSTGAISPAARYASIEKAKQHSPSKKLIQSHHQYHNHTHSHSHNEDYHGHTNNNDRNMATGGGFVEGIEMDHNIERSSLF----PGILSPGPTSLPMIPPSFFSP 225 +R+LQ GPRP+PL V KDS+KIKKPP P + Q + PR+PV+IY VSPKV+H ++FM +VQRLTG SS F S G +SPAAR AS E A SP G R+ E +E++ +E ++ F PGILSP P LP FSP Sbjct: 19 KRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPYI---------PREPVVIYAVSPKVVHATASEFMNVVQRLTGISSGV--------FLES-------------GGGGDVSPAARLASTENA---SP------------------------RGGKEPAARD--------ETVEINTAMEEAAEFGGYAPGILSPSPALLPTASTGIFSP 171
BLAST of hap1-g6777.t2 vs. Araport11
Match: | (Symbols: VQ20 | VQ motif-containing protein 20 | chr3:6300827-6301684 REVERSE LENGTH=285) HSP 1 Score: 55.8398 bits (133), Expect = 6.023e-9 Identity = 27/53 (50.94%), Postives = 33/53 (62.26%), Query Frame = 0 Query: 64 PRQPVIIYTVSPKVIHTNPNDFMTLVQRLTGSSSSSSTTTTRTSFTSSKTVAS 116 PR PVIIYT +P++IHTNP DFM LVQ+LTG + S + T V S Sbjct: 70 PRHPVIIYTHTPRIIHTNPKDFMALVQKLTGMTHSDEDLGGGNAMTDPGVVKS 122
BLAST of hap1-g6777.t2 vs. Araport11
Match: | (Symbols: PDE337 | PIGMENT DEFECTIVE 337 | chr1:25661721-25662179 REVERSE LENGTH=152) HSP 1 Score: 53.5286 bits (127), Expect = 1.225e-8 Identity = 35/80 (43.75%), Postives = 40/80 (50.00%), Query Frame = 0 Query: 16 ELQGPRPAPLKVRKDSYKIKKPPVAPPSQQQQQQQQHHHHHHQAPAPPPRQ-PVIIYTVSPKVIHTNPNDFMTLVQRLTG 94 E+ G RP+ LK+ +S+ IKK P P R PVIIY SPKVIHT DFM LVQRLTG Sbjct: 8 EINGSRPSSLKLAGESHTIKKTSSC----------------KSKPRPHGRASPVIIYAHSPKVIHTRAEDFMALVQRLTG 71 The following BLAST results are available for this feature:
BLAST of hap1-g6777.t2 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of hap1-g6777.t2 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs UniProt Swissprot) Total hits: 4 Position : 0 Zoom : x 1
BLAST of hap1-g6777.t2 vs. Araport11
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs Araport11) Total hits: 6 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus garrawayi UQ v1.0 proteins
Date Performed: 2024-10-02 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >hap1-g6777.t2_Cgarrawayi-UQ_v1 ID=hap1-g6777.t2_Cgarrawayi-UQ_v1; Name=hap1-g6777.t2; organism=Citrus garrawayi; type=mRNA; length=789bpback to top protein sequence of hap1-g6777.t2_Cgarrawayi-UQ_v1 >hap1-g6777.t2_Cgarrawayi-UQ_v1 ID=hap1-g6777.t2_Cgarrawayi-UQ_v1; Name=hap1-g6777.t2_Cgarrawayi-UQ_v1; organism=Citrus garrawayi; type=polypeptide; length=263bpback to top mRNA from alignment at hap1-C.garr_03:4711626..4712563- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=938bp; location=Sequence derived from: hap1-C.garr_03:4711626..4712563- (Citrus garrawayiback to top Coding sequence (CDS) from alignment at hap1-C.garr_03:4711626..4712563- >hap1-g6777.t2_Cgarrawayi-UQ_v1 ID=hap1-g6777.t2_Cgarrawayi-UQ_v1; Name=hap1-g6777.t2; organism=Citrus garrawayi; type=CDS; length=789bp; location=Sequence derived from: hap1-C.garr_03:4711626..4712563- (Citrus garrawayiback to top |