hap2-g12996.t2
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of hap2-g12996.t2 vs. ExPASy TrEMBL (2024)
Match: tr|V4TQ15|V4TQ15_CITCL (Ubiquitin-like domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10021471mg PE=4 SV=1) HSP 1 Score: 496.893 bits (1278), Expect = 1.422e-175 Identity = 256/263 (97.34%), Postives = 259/263 (98.48%), Query Frame = 0 Query: 48 PGELEIRPGGMFVQMRNSESSNRSSVSVPTIRVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICLQVDKFSQQVTDLEAIASRGVELTDEHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQEKRVQSYIETLDMLRLRNTQLSSKSGKVPLQKQEHSYGKVTVPLQKQAKQRNLTELKHPFRDSDSFVVTTKWETFD 310
PGELEIRPGGMFVQMRNSESSNRSSVSVPTI+VRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQIC QVDKF+QQVTDLEAIASRGVELTD+HLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQEKRVQSYIETLDMLRLRNTQLSSKSGKVPLQKQEHS GKVTVPLQKQAKQRNLTEL H FRDSDSFVVTTKWETFD
Sbjct: 28 PGELEIRPGGMFVQMRNSESSNRSSVSVPTIKVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICFQVDKFAQQVTDLEAIASRGVELTDKHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQEKRVQSYIETLDMLRLRNTQLSSKSGKVPLQKQEHSSGKVTVPLQKQAKQRNLTELMHSFRDSDSFVVTTKWETFD 290
BLAST of hap2-g12996.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2H5Q906|A0A2H5Q906_CITUN (Ubiquitin-like domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_206740 PE=4 SV=1) HSP 1 Score: 495.738 bits (1275), Expect = 3.718e-175 Identity = 254/263 (96.58%), Postives = 260/263 (98.86%), Query Frame = 0 Query: 48 PGELEIRPGGMFVQMRNSESSNRSSVSVPTIRVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICLQVDKFSQQVTDLEAIASRGVELTDEHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQEKRVQSYIETLDMLRLRNTQLSSKSGKVPLQKQEHSYGKVTVPLQKQAKQRNLTELKHPFRDSDSFVVTTKWETFD 310
PGELEIRPGGMFVQMRNSESSNRSSVSVPTI+VRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQIC QVDKF+QQVTDLEAIASRGVELTDEHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQEKRVQSYIETLD+L+L NT+LSSKSG+VPLQKQEHSYGKVTVPLQKQAKQRNLTEL HPFRDSDSFVVTTKWETFD
Sbjct: 27 PGELEIRPGGMFVQMRNSESSNRSSVSVPTIKVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICFQVDKFAQQVTDLEAIASRGVELTDEHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQEKRVQSYIETLDLLKLCNTKLSSKSGEVPLQKQEHSYGKVTVPLQKQAKQRNLTELMHPFRDSDSFVVTTKWETFD 289
BLAST of hap2-g12996.t2 vs. ExPASy TrEMBL (2024)
Match: tr|V4TK51|V4TK51_CITCL (Ubiquitin-like domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10021471mg PE=4 SV=1) HSP 1 Score: 405.986 bits (1042), Expect = 1.535e-140 Identity = 202/214 (94.39%), Postives = 208/214 (97.20%), Query Frame = 0 Query: 25 MLSLAKSKSSSVSSRVDMNNNIS----PGELEIRPGGMFVQMRNSESSNRSSVSVPTIRVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICLQVDKFSQQVTDLEAIASRGVELTDEHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQ 234
MLSLA+SKSSSVSSRV+MNNN + PGELEIRPGGMFVQMRNSESSNRSSVSVPTI+VRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQIC QVDKF+QQVTDLEAIASRGVELTD+HLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQ
Sbjct: 1 MLSLARSKSSSVSSRVNMNNNNNNNNNPGELEIRPGGMFVQMRNSESSNRSSVSVPTIKVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICFQVDKFAQQVTDLEAIASRGVELTDKHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQ 214
BLAST of hap2-g12996.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5C7H2B1|A0A5C7H2B1_9ROSI (Ubiquitin-like domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_023511 PE=4 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 9.822e-108 Identity = 174/288 (60.42%), Postives = 219/288 (76.04%), Query Frame = 0 Query: 31 SKSSSVSSRVDMNNNISPGELEIRPGGMFVQMRNSESSNRSSVSVPTIRVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICLQVDKFSQQVTDLE-AIASRGVE-LTDEHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQEKRVQSYIETLDMLRLRNTQLSSKSGKVPLQKQEHSYGKVTVPLQKQAKQRNLT-ELK-----HPFRDSDSFVVTTKWETFD 310
++ + V RVDM + ELEIRPGGM VQ RN +S N+ S S+PTI+VRVK+ S YHE+ IS QASFGELKK+L+ERTGLHPEEQKLIYKKKERDSK YLD ARV++GSK VLVEDI +RERRCLEMLK A+ +K S S+A+I L+VDK + QVTDL+ A+AS G + L D L+NLIG LMTELVKLD I ++GDLKLQKR QE+RVQ+YIE LD L+L N++L+S G +++++HS + Q ++KQRNLT E++ HP +S VV+TKWETFD
Sbjct: 9 NRRNCVGGRVDMKID----ELEIRPGGMLVQKRNPDSDNQISASIPTIKVRVKYNSIYHEICISSQASFGELKKILAERTGLHPEEQKLIYKKKERDSKAYLDGARVKNGSKFVLVEDIASRERRCLEMLKNARIEKASKSLAEISLEVDKLANQVTDLQSAVASEGEKVLLDIDLENLIGKLMTELVKLDGISIEGDLKLQKRVQERRVQNYIEILDTLKLCNSKLTSNEGGNNIKQEQHSTFE---KQQGRSKQRNLTGEIRPNLQQHPLMQHESVVVSTKWETFD 289
BLAST of hap2-g12996.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5N6R2U0|A0A5N6R2U0_9ROSI (Ubiquitin-like domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_012104 PE=4 SV=1) HSP 1 Score: 310.457 bits (794), Expect = 5.654e-102 Identity = 168/296 (56.76%), Postives = 215/296 (72.64%), Query Frame = 0 Query: 30 KSKSSSVSSRVDMNNNISPGE--------LEIRPGGMFVQMRNSESSNRSSVSVPTIRVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICLQVDKFSQQVTDLEAIASRGVELTDEHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQEKRVQSYIETLDMLRLRNTQLSSKSGKVPLQKQEHSYGKVTVPLQKQAKQRNLTE-------LKHPFRDSDSFVVTTKWETFD 310
K +S ++S M+NN S G+ LE+RPGGM VQ R E ++RS S+PTI+VRVK+GS+Y E+ IS QASFGELKKML+E TGL+P++QKLI+K KERDSK YLD ARV+DGSKIVLVEDI +RERRCLEM K AK +K S S+A+I L+VDK + QVT LEA ASR E+++ +DNL M++LVKLD I+V+GDLKLQ+R QE+RVQ +IETLD L+L N++ S GKVP Q+Q HS ++ +P+QKQ Q E L+ P R S+ VVTT+WETFD
Sbjct: 2 KPMNSKLNSIFSMSNNKSVGDGGSPNVADLEVRPGGMLVQKR--EMNDRSQ-SIPTIKVRVKYGSSYREIRISSQASFGELKKMLAESTGLYPQDQKLIFKNKERDSKAYLDAARVKDGSKIVLVEDIESRERRCLEMQKNAKVEKASKSLAEISLEVDKLAGQVTSLEAKASRDGEVSEMDVDNLTEMFMSKLVKLDGILVEGDLKLQRRVQERRVQKHIETLDALKLLNSKPRSNGGKVPWQQQAHSSKQIPIPIQKQQVQLRQRESSGQMPVLQQPLRHSEPVVVTTQWETFD 294
BLAST of hap2-g12996.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2P2K395|A0A2P2K395_RHIMU (BAG family molecular chaperone regulator 1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 306.99 bits (785), Expect = 1.543e-100 Identity = 165/287 (57.49%), Postives = 208/287 (72.47%), Query Frame = 0 Query: 32 KSSSVSSRVDMNNNISPGELEIRPGGMFVQMRNSESSNRSSVSVPTIRVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICLQVDKFSQQVTDLEAIASRGVELTDEHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQEKRVQSYIETLDMLRLRNTQLSSKSGKVPLQKQEHSYGKVTVPLQK---QAKQRNLTE-----LKHPFRDSDSFVVTTKWETFD 310
K S S R D I +LE+RPGGM VQ R++ SN+ SV++PTI+VRVKFGS Y E+ IS QASFGELKKML+E+TG+H ++QKLIYKKKER+SK +LDVA V+DGSKIVL+EDI +RERRCLEMLK A+ +K S S+ QI L+VDK V LEA +SRG+++ + +D L LMT+LV LD I ++G+LKLQKR QE+RVQ YIETLD+L+L N S+ GK+PL +QE S GKV +P QK QAK N+TE P +S+S VVT KW TFD
Sbjct: 15 KRGSFSGRKD----IKVEDLEVRPGGMIVQRRSTSESNQISVAIPTIKVRVKFGSFYREIRISSQASFGELKKMLAEQTGVHHQDQKLIYKKKERNSKAFLDVAGVKDGSKIVLIEDITSRERRCLEMLKSARTEKASKSLQQISLEVDKLDGDVKALEATSSRGMKVAETDVDKLTELLMTKLVTLDGIDINGELKLQKRMQERRVQKYIETLDVLKLNNATSSNNGGKLPLLQQEKSTGKVPIPRQKNPVQAKNGNVTEPMPVRQPQPLSNSESVVVTKKWVTFD 297
BLAST of hap2-g12996.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6P5WKA0|A0A6P5WKA0_DURZI (BAG family molecular chaperone regulator 1-like isoform X2 OS=Durio zibethinus OX=66656 GN=LOC111275339 PE=4 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 3.788e-100 Identity = 163/293 (55.63%), Postives = 211/293 (72.01%), Query Frame = 0 Query: 25 MLSLAKSKSSSVSSRVDMNNNISPGELEIRPGGMFVQMRNSESSNRSSVSVPTIRVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICLQVDKFSQQVTDLEAIASRGVELTDEHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQEKRVQSYIETLDMLRLRNTQLSSKSGKVPLQKQEHSYGKVTVPLQK---QAKQRNLTE----LKHPFRDSDSFVVTTKWETFD 310
MLS+A KS ++++P E E+RPGGM VQ R+S SS ++S S+PTIRVRVK+GSTYH++ IS QASFG+LKKML++ TGLHP +QKL YK KERDSK YLDVA V+DGSKI+LVEDI ++ERRCLEMLK AK +K S S++QI L+V+KF+ QV LEA SRG E+ +DNL G LMT LV+LDE+ V GDLKLQK+ EK+VQ +IETLD ++L+N S K+ +++ EHS K + QK Q KQ++LT+ ++ R S+ V TTKWETFD
Sbjct: 1 MLSMANKKSIGGG-----ESSVNPKEWEVRPGGMLVQKRDS-SSIQTSFSIPTIRVRVKYGSTYHDICISSQASFGDLKKMLADHTGLHPLDQKLTYKNKERDSKAYLDVAGVKDGSKILLVEDIASKERRCLEMLKNAKMEKSSKSLSQIGLEVEKFADQVKALEATVSRGHEVQQMDVDNLTGFLMTSLVRLDELAVKGDLKLQKKILEKKVQKHIETLDAMKLQNKTPRSNGDKIQVKQHEHSMEKGPIATQKEQMQEKQKSLTDQMPTMRQKQRQSEPVVFTTKWETFD 287
BLAST of hap2-g12996.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A061G8K1|A0A061G8K1_THECC (BCL-2-associated athanogene 1, putative OS=Theobroma cacao OX=3641 GN=TCM_027108 PE=4 SV=1) HSP 1 Score: 305.064 bits (780), Expect = 9.328e-100 Identity = 163/298 (54.70%), Postives = 215/298 (72.15%), Query Frame = 0 Query: 21 RLQGMLSLAKSKSSSVSSRVDMNNNISPGELEIRPGGMFVQMRNSESSNRSSVSVPTIRVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICLQVDKFSQQVTDLEAIASRGVELTDEHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQEKRVQSYIETLDMLRLRNTQLSSKSGKVPLQKQEHSYGKVTVPLQK---QAKQRNLT----ELKHPFRDSD-SFVVTTKWETFD 310
+++G+ S+ K +S +++P E E+ PGGM VQ R+S SSN+SSV +PTIRVRVK GSTYHE+ +S QASFGELKKML++ TGLHP +QKLIY+KKERDSK +LDVARV+DGSK+VLVEDI ++ERRCLEMLKIAK +K S S+ QI L+VDK+++QV LE +RG ++ +D+L G LMT LVKLDE+ V GDLK QK E+++Q +ETLD ++L+NT SK K+P+++ EHS GK + QK Q KQ++L L+ R S+ S V TTKWETFD
Sbjct: 5 KVKGVCSMPNKKPVGGAS----EGSVNPKEWEVTPGGMLVQKRDS-SSNQSSVPIPTIRVRVKHGSTYHEIRVSSQASFGELKKMLADHTGLHPLDQKLIYRKKERDSKAFLDVARVKDGSKMVLVEDIASKERRCLEMLKIAKMEKSSKSLLQIGLEVDKYAEQVKALETTVARGSKVQQMDVDHLTGLLMTSLVKLDELAVIGDLKSQKTMLERKLQKQVETLDAMKLQNTMPRSKGDKIPVKQHEHSIGKGPIATQKEQTQEKQKSLIVQMPMLQQTQRHSEQSVVFTTKWETFD 297
BLAST of hap2-g12996.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6A1VZ65|A0A6A1VZ65_9ROSI (BAG family molecular chaperone regulator 1 OS=Morella rubra OX=262757 GN=CJ030_MR4G021144 PE=4 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 1.027e-99 Identity = 161/289 (55.71%), Postives = 211/289 (73.01%), Query Frame = 0 Query: 31 SKSSSVSSRVDMNNNISPG--ELEIRPGGMFVQMRNSESSNRSSVSVPTIRVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICLQVDKFSQQVTDLEAIASRGVELTDEHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQEKRVQSYIETLDMLRLRNTQLSSKSGKVPLQKQEHSYGKVTVPLQKQA---KQRNLTEL----KHPFRDSDSFVVTTKWETFD 310
S S S+ ++ + + + G +LEIRPGGM VQ R + N+S+VS PTI VRVK+GS+YH + I QASFGELKKML+E TGL+P++QKLI+K K+RDSK YLD ARV+DGSKIVLVEDI +RE+RCLE+LK AK +K S +A+I L++DK QVT L+A ASRG E++ +DNL LM LVKLD +V +GDLKLQ+R Q KR+Q +IETLD L+L+N++ SSK GK+P Q Q HS G++++P+QKQ +QR T + P SDS VVTTKWE F+
Sbjct: 9 SSSFSLPNKSFVGDGVGQGVAKLEIRPGGMLVQKRET---NQSTVSTPTILVRVKYGSSYHHIRICSQASFGELKKMLAESTGLYPQDQKLIFKNKDRDSKEYLDAARVKDGSKIVLVEDIASREKRCLELLKNAKIEKVSKLLAEISLEMDKLGGQVTALQATASRGGEVSAMDVDNLTELLMANLVKLDGVVAEGDLKLQRRMQVKRLQKHIETLDALKLQNSKSSSKGGKIPWQTQTHSSGQMSIPMQKQQVQLRQREPTGQMPVPQQPSWHSDSVVVTTKWEIFE 294
BLAST of hap2-g12996.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A6P5WK91|A0A6P5WK91_DURZI (BAG family molecular chaperone regulator 2-like isoform X1 OS=Durio zibethinus OX=66656 GN=LOC111275339 PE=4 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 4.694e-99 Identity = 164/299 (54.85%), Postives = 215/299 (71.91%), Query Frame = 0 Query: 19 ILRLQGMLSLAKSKSSSVSSRVDMNNNISPGELEIRPGGMFVQMRNSESSNRSSVSVPTIRVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICLQVDKFSQQVTDLEAIASRGVELTDEHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQEKRVQSYIETLDMLRLRNTQLSSKSGKVPLQKQEHSYGKVTVPLQK---QAKQRNLTE----LKHPFRDSDSFVVTTKWETFD 310
+L ++ MLS+A KS ++++P E E+RPGGM VQ R+S SS ++S S+PTIRVRVK+GSTYH++ IS QASFG+LKKML++ TGLHP +QKL YK KERDSK YLDVA V+DGSKI+LVEDI ++ERRCLEMLK AK +K S S++QI L+V+KF+ QV LEA SRG E+ +DNL G LMT LV+LDE+ V GDLKLQK+ EK+VQ +IETLD ++L+N S K+ +++ EHS K + QK Q KQ++LT+ ++ R S+ V TTKWETFD
Sbjct: 89 VLAVKEMLSMANKKSIGGG-----ESSVNPKEWEVRPGGMLVQKRDS-SSIQTSFSIPTIRVRVKYGSTYHDICISSQASFGDLKKMLADHTGLHPLDQKLTYKNKERDSKAYLDVAGVKDGSKILLVEDIASKERRCLEMLKNAKMEKSSKSLSQIGLEVEKFADQVKALEATVSRGHEVQQMDVDNLTGFLMTSLVRLDELAVKGDLKLQKKILEKKVQKHIETLDAMKLQNKTPRSNGDKIQVKQHEHSMEKGPIATQKEQMQEKQKSLTDQMPTMRQKQRQSEPVVFTTKWETFD 381
BLAST of hap2-g12996.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q0WUQ1|BAG1_ARATH (BAG family molecular chaperone regulator 1 OS=Arabidopsis thaliana OX=3702 GN=BAG1 PE=1 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 1.583e-70 Identity = 125/277 (45.13%), Postives = 182/277 (65.70%), Query Frame = 0 Query: 50 ELEIRPGGMFVQMRNSESSNRSSVSVPTIRVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICLQVDKFSQQVTDLEAIASRGVELTDEHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQEKRVQSYIETLDMLRLRNT-------QLSSKSGKVPLQKQEHSYGKVTVPLQK------QAKQRNLTELKHPFRDSDS-FVV--TTKWETFD 310
+LEIRPGGM VQ RN + P IRVR+K+G+ YHE+ ISPQASFGELKKML+ TG+H ++QKL+YK KERDSK +LDV+ V+D SK+VL+ED +++E+R LEM KIAK +K S +I+ I L+VD+ +V+ E + +G ++ ++ L +I LM EL+KLD IV +GD+KLQ++ Q KRVQ+Y+ETLD L+++N+ Q S+ P+Q+ + + P+Q Q K++ + P + FV+ + KWETFD
Sbjct: 39 DLEIRPGGMLVQKRNPDLDPVGPPPPPMIRVRIKYGAVYHEINISPQASFGELKKMLTGPTGIHHQDQKLMYKDKERDSKAFLDVSGVKDKSKMVLIEDPLSQEKRFLEMRKIAKTEKASKAISDISLEVDRLGGRVSAFEMVTKKGGKIAEKDLVTVIELLMNELIKLDAIVAEGDVKLQRKMQVKRVQNYVETLDALKVKNSMANGQQKQSSTAQRLAPIQEHNNEERQEQKPIQSLMDMPIQYKEKKQEIEEEPRNSGEGPFVLDSSAKWETFD 315
BLAST of hap2-g12996.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q0WPX7|BAG2_ARATH (BAG family molecular chaperone regulator 2 OS=Arabidopsis thaliana OX=3702 GN=BAG2 PE=1 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 3.630e-65 Identity = 110/263 (41.83%), Postives = 177/263 (67.30%), Query Frame = 0 Query: 49 GELEIRPGGMFVQMRNSESSNRSSVSVP-TIRVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICLQVDKFSQQVTDLEAIASRGVELTDEHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQEKRVQSYIETLDMLRLRNTQLSSKSGKVPLQKQEHSYGKVTVPLQKQAKQRNLTELKHPFRDSDSFVVTTKWETFD 310
GE+E+RPGGM VQ R SS SVP IRVRVK+GS +HE+ I+ Q++FGELKK+LS TG+H ++ ++IYK KERDSK +LD++ V+D SK++L+ED I++E+R LE+ KIA +K S +I+ I QV++ + Q++ + + +G ++ +++L+NL+ LM +LVKLD I DGD+KL+K+ QE+R+ Y+E LD+L+++N++ K +++E + ++A ++ P ++TT+WETFD
Sbjct: 14 GEMELRPGGMVVQKRTDHSS-----SVPRGIRVRVKYGSVHHEISINSQSTFGELKKILSGATGVHHQDMQIIYKDKERDSKMFLDLSGVKDRSKLILIEDPISQEKRLLELRKIATKEKSSKAISDISFQVERLAGQLSAFDTVIGKGGKVEEKNLENLMEMLMNQLVKLDAISGDGDVKLKKKMQEERLHKYVEALDLLKIKNSRQPQTKPKPQYKERE------MLTFYEEASRKPTASSSSP-----PVIITTRWETFD 260
BLAST of hap2-g12996.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LYP4|BAG3_ARATH (BAG family molecular chaperone regulator 3 OS=Arabidopsis thaliana OX=3702 GN=BAG3 PE=1 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 3.407e-60 Identity = 120/291 (41.24%), Postives = 179/291 (61.51%), Query Frame = 0 Query: 42 MNNNISP---------GELEIRPGGMFVQMRNSESSNRSSVSVPTI-RVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICLQVDKFSQQVTDLEAIASRGVELTDEHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQEKRVQSYIETLDMLRLRNTQLSSKSGKVPLQKQEHSYGKVTVPLQKQAKQRNLTEL-----KHPFRDSDS-------FVVTTKWETFD 310
MN SP E E RPGGM VQ R ++S+ VP + RVRVK+GS YHE+ I+ Q+SFGELKKMLS++ GLH E+ K++YK KERDSK +LD+ V+D SK+V+ ED I++E+R L K A +K S SI+ I +VD+ + QV+ E + ++G ++ ++ L NLI LM +L++LD I+ DGD+KL ++ Q +RVQ Y+E LD+L+++N+ + KV + K + Q + +QR+L + P R+S++ VV +KWE FD
Sbjct: 4 MNTGTSPSVIGGGTSGNEWESRPGGMVVQRRTDQNSD-----VPRVFRVRVKYGSVYHEININSQSSFGELKKMLSDQVGLHHEDMKVLYKDKERDSKMFLDLCGVKDRSKLVVKEDPISQEKRLLAKRKNAAIEKASKSISDISFEVDRLAGQVSAFETVINKGGKVEEKSLVNLIEMLMNQLLRLDAIIADGDVKLMRKMQVQRVQKYVEALDLLKVKNS-----AKKVEVNKSVRHKPQT----QTRFEQRDLLSFVEEEEEEP-RNSNASSSSGTPAVVASKWEMFD 279
BLAST of hap2-g12996.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8RX71|BAG4_ARATH (BAG family molecular chaperone regulator 4 OS=Arabidopsis thaliana OX=3702 GN=BAG4 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.958e-34 Identity = 86/280 (30.71%), Postives = 141/280 (50.36%), Query Frame = 0 Query: 42 MNNNISPGELEIRPGGMFVQMRNSESSN----------RSSVSVPTIRVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICLQVDKFSQQVTDLEAIASRGVELTDEHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQEKRVQSYIETLDMLRLRNTQ-LSSKSGKVPLQKQEHSYGKVTVPLQKQAKQRNLTELKHPFRDSDSFVVTTKWETFD 310
M+N+ E E+RPGGM VQ R+ +S+ S+ TIR+ V GS++H++ IS A+FG++KK L ++TGL E K++++ ERD L A V+D SK+V+V + N+ + + +K ++ + +VDK S +V LE + G ++ D LM +L+KLD I +GD K+Q++ + +R+Q+ E +D L+ R + +S + + S+G + L P S S VT WE FD
Sbjct: 2 MHNSTEESEWEVRPGGMLVQRRDDAASSDHKPLQDPDSASAAFAQTIRITVSHGSSHHDLHISAHATFGDVKKALVQKTGLEASELKILFRGVERDDAEQLQAAGVKDASKLVVVVEDTNKRVEQQPPVVTKEMEKAIAAVNAVTGEVDKLSDRVVALEVAVNGGTQVAVREFDMAAELLMRQLLKLDGIEAEGDAKVQRKAEVRRIQNLQEAVDKLKARCSNPFVDQSKAAAVSTEWESFGN------------GVGSLNPPPPASPSANVTQDWEKFD 269
BLAST of hap2-g12996.t2 vs. Araport11
Match: | (Symbols: BAG1, ATBAG1 | BCL-2-associated athanogene 1 | chr5:21152449-21153741 REVERSE LENGTH=342) HSP 1 Score: 225.328 bits (573), Expect = 1.647e-71 Identity = 125/277 (45.13%), Postives = 182/277 (65.70%), Query Frame = 0 Query: 50 ELEIRPGGMFVQMRNSESSNRSSVSVPTIRVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICLQVDKFSQQVTDLEAIASRGVELTDEHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQEKRVQSYIETLDMLRLRNT-------QLSSKSGKVPLQKQEHSYGKVTVPLQK------QAKQRNLTELKHPFRDSDS-FVV--TTKWETFD 310
+LEIRPGGM VQ RN + P IRVR+K+G+ YHE+ ISPQASFGELKKML+ TG+H ++QKL+YK KERDSK +LDV+ V+D SK+VL+ED +++E+R LEM KIAK +K S +I+ I L+VD+ +V+ E + +G ++ ++ L +I LM EL+KLD IV +GD+KLQ++ Q KRVQ+Y+ETLD L+++N+ Q S+ P+Q+ + + P+Q Q K++ + P + FV+ + KWETFD
Sbjct: 39 DLEIRPGGMLVQKRNPDLDPVGPPPPPMIRVRIKYGAVYHEINISPQASFGELKKMLTGPTGIHHQDQKLMYKDKERDSKAFLDVSGVKDKSKMVLIEDPLSQEKRFLEMRKIAKTEKASKAISDISLEVDRLGGRVSAFEMVTKKGGKIAEKDLVTVIELLMNELIKLDAIVAEGDVKLQRKMQVKRVQNYVETLDALKVKNSMANGQQKQSSTAQRLAPIQEHNNEERQEQKPIQSLMDMPIQYKEKKQEIEEEPRNSGEGPFVLDSSAKWETFD 315
BLAST of hap2-g12996.t2 vs. Araport11
Match: | (Symbols: BAG2, ATBAG2 | BCL-2-associated athanogene 2 | chr5:24940477-24941775 FORWARD LENGTH=285) HSP 1 Score: 209.534 bits (532), Expect = 3.780e-66 Identity = 110/263 (41.83%), Postives = 177/263 (67.30%), Query Frame = 0 Query: 49 GELEIRPGGMFVQMRNSESSNRSSVSVP-TIRVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICLQVDKFSQQVTDLEAIASRGVELTDEHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQEKRVQSYIETLDMLRLRNTQLSSKSGKVPLQKQEHSYGKVTVPLQKQAKQRNLTELKHPFRDSDSFVVTTKWETFD 310
GE+E+RPGGM VQ R SS SVP IRVRVK+GS +HE+ I+ Q++FGELKK+LS TG+H ++ ++IYK KERDSK +LD++ V+D SK++L+ED I++E+R LE+ KIA +K S +I+ I QV++ + Q++ + + +G ++ +++L+NL+ LM +LVKLD I DGD+KL+K+ QE+R+ Y+E LD+L+++N++ K +++E + ++A ++ P ++TT+WETFD
Sbjct: 14 GEMELRPGGMVVQKRTDHSS-----SVPRGIRVRVKYGSVHHEISINSQSTFGELKKILSGATGVHHQDMQIIYKDKERDSKMFLDLSGVKDRSKLILIEDPISQEKRLLELRKIATKEKSSKAISDISFQVERLAGQLSAFDTVIGKGGKVEEKNLENLMEMLMNQLVKLDAISGDGDVKLKKKMQEERLHKYVEALDLLKIKNSRQPQTKPKPQYKERE------MLTFYEEASRKPTASSSSP-----PVIITTRWETFD 260
BLAST of hap2-g12996.t2 vs. Araport11
Match: | (Symbols: BAG2, ATBAG2 | BCL-2-associated athanogene 2 | chr5:24940477-24941775 FORWARD LENGTH=296) HSP 1 Score: 200.675 bits (509), Expect = 1.478e-62 Identity = 110/274 (40.15%), Postives = 177/274 (64.60%), Query Frame = 0 Query: 49 GELEIRPGGMFVQMRNSESSNRSSVSVP-TIRVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICLQVDKFSQQVTDLEAIASRGVELTDEHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQ-----------EKRVQSYIETLDMLRLRNTQLSSKSGKVPLQKQEHSYGKVTVPLQKQAKQRNLTELKHPFRDSDSFVVTTKWETFD 310
GE+E+RPGGM VQ R SS SVP IRVRVK+GS +HE+ I+ Q++FGELKK+LS TG+H ++ ++IYK KERDSK +LD++ V+D SK++L+ED I++E+R LE+ KIA +K S +I+ I QV++ + Q++ + + +G ++ +++L+NL+ LM +LVKLD I DGD+KL+K+ Q E+R+ Y+E LD+L+++N++ K +++E + ++A ++ P ++TT+WETFD
Sbjct: 14 GEMELRPGGMVVQKRTDHSS-----SVPRGIRVRVKYGSVHHEISINSQSTFGELKKILSGATGVHHQDMQIIYKDKERDSKMFLDLSGVKDRSKLILIEDPISQEKRLLELRKIATKEKSSKAISDISFQVERLAGQLSAFDTVIGKGGKVEEKNLENLMEMLMNQLVKLDAISGDGDVKLKKKMQNLMIRFTNCWKEERLHKYVEALDLLKIKNSRQPQTKPKPQYKERE------MLTFYEEASRKPTASSSSP-----PVIITTRWETFD 271
BLAST of hap2-g12996.t2 vs. Araport11
Match: | (Symbols: BAG3, ATBAG3 | BCL-2-associated athanogene 3 | chr5:2265545-2266720 REVERSE LENGTH=303) HSP 1 Score: 197.593 bits (501), Expect = 3.543e-61 Identity = 120/291 (41.24%), Postives = 179/291 (61.51%), Query Frame = 0 Query: 42 MNNNISP---------GELEIRPGGMFVQMRNSESSNRSSVSVPTI-RVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICLQVDKFSQQVTDLEAIASRGVELTDEHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQEKRVQSYIETLDMLRLRNTQLSSKSGKVPLQKQEHSYGKVTVPLQKQAKQRNLTEL-----KHPFRDSDS-------FVVTTKWETFD 310
MN SP E E RPGGM VQ R ++S+ VP + RVRVK+GS YHE+ I+ Q+SFGELKKMLS++ GLH E+ K++YK KERDSK +LD+ V+D SK+V+ ED I++E+R L K A +K S SI+ I +VD+ + QV+ E + ++G ++ ++ L NLI LM +L++LD I+ DGD+KL ++ Q +RVQ Y+E LD+L+++N+ + KV + K + Q + +QR+L + P R+S++ VV +KWE FD
Sbjct: 4 MNTGTSPSVIGGGTSGNEWESRPGGMVVQRRTDQNSD-----VPRVFRVRVKYGSVYHEININSQSSFGELKKMLSDQVGLHHEDMKVLYKDKERDSKMFLDLCGVKDRSKLVVKEDPISQEKRLLAKRKNAAIEKASKSISDISFEVDRLAGQVSAFETVINKGGKVEEKSLVNLIEMLMNQLLRLDAIIADGDVKLMRKMQVQRVQKYVEALDLLKVKNS-----AKKVEVNKSVRHKPQT----QTRFEQRDLLSFVEEEEEEP-RNSNASSSSGTPAVVASKWEMFD 279
BLAST of hap2-g12996.t2 vs. Araport11
Match: | (Symbols: BAG2, ATBAG2 | BCL-2-associated athanogene 2 | chr5:24940477-24941528 FORWARD LENGTH=215) HSP 1 Score: 178.718 bits (452), Expect = 5.138e-55 Identity = 91/187 (48.66%), Postives = 138/187 (73.80%), Query Frame = 0 Query: 49 GELEIRPGGMFVQMRNSESSNRSSVSVP-TIRVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICLQVDKFSQQVTDLEAIASRGVELTDEHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQ 234
GE+E+RPGGM VQ R SS SVP IRVRVK+GS +HE+ I+ Q++FGELKK+LS TG+H ++ ++IYK KERDSK +LD++ V+D SK++L+ED I++E+R LE+ KIA +K S +I+ I QV++ + Q++ + + +G ++ +++L+NL+ LM +LVKLD I DGD+KL+K+ Q
Sbjct: 14 GEMELRPGGMVVQKRTDHSS-----SVPRGIRVRVKYGSVHHEISINSQSTFGELKKILSGATGVHHQDMQIIYKDKERDSKMFLDLSGVKDRSKLILIEDPISQEKRLLELRKIATKEKSSKAISDISFQVERLAGQLSAFDTVIGKGGKVEEKNLENLMEMLMNQLVKLDAISGDGDVKLKKKMQ 195
BLAST of hap2-g12996.t2 vs. Araport11
Match: | (Symbols: BAG2, ATBAG2 | BCL-2-associated athanogene 2 | chr5:24940477-24941295 FORWARD LENGTH=206) HSP 1 Score: 177.948 bits (450), Expect = 6.838e-55 Identity = 91/187 (48.66%), Postives = 138/187 (73.80%), Query Frame = 0 Query: 49 GELEIRPGGMFVQMRNSESSNRSSVSVP-TIRVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICLQVDKFSQQVTDLEAIASRGVELTDEHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQ 234
GE+E+RPGGM VQ R SS SVP IRVRVK+GS +HE+ I+ Q++FGELKK+LS TG+H ++ ++IYK KERDSK +LD++ V+D SK++L+ED I++E+R LE+ KIA +K S +I+ I QV++ + Q++ + + +G ++ +++L+NL+ LM +LVKLD I DGD+KL+K+ Q
Sbjct: 14 GEMELRPGGMVVQKRTDHSS-----SVPRGIRVRVKYGSVHHEISINSQSTFGELKKILSGATGVHHQDMQIIYKDKERDSKMFLDLSGVKDRSKLILIEDPISQEKRLLELRKIATKEKSSKAISDISFQVERLAGQLSAFDTVIGKGGKVEEKNLENLMEMLMNQLVKLDAISGDGDVKLKKKMQ 195
BLAST of hap2-g12996.t2 vs. Araport11
Match: | (Symbols: BAG2, ATBAG2 | BCL-2-associated athanogene 2 | chr5:24940477-24941026 FORWARD LENGTH=148) HSP 1 Score: 146.362 bits (368), Expect = 2.814e-43 Identity = 74/140 (52.86%), Postives = 105/140 (75.00%), Query Frame = 0 Query: 49 GELEIRPGGMFVQMRNSESSNRSSVSVP-TIRVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICLQVDKFSQQVT 187
GE+E+RPGGM VQ R SS SVP IRVRVK+GS +HE+ I+ Q++FGELKK+LS TG+H ++ ++IYK KERDSK +LD++ V+D SK++L+ED I++E+R LE+ KIA +K S +I+ I QV++ + QVT
Sbjct: 14 GEMELRPGGMVVQKRTDHSS-----SVPRGIRVRVKYGSVHHEISINSQSTFGELKKILSGATGVHHQDMQIIYKDKERDSKMFLDLSGVKDRSKLILIEDPISQEKRLLELRKIATKEKSSKAISDISFQVERLAGQVT 148
BLAST of hap2-g12996.t2 vs. Araport11
Match: | (Symbols: BAG2, ATBAG2 | BCL-2-associated athanogene 2 | chr5:24940477-24941026 FORWARD LENGTH=148) HSP 1 Score: 146.362 bits (368), Expect = 2.814e-43 Identity = 74/140 (52.86%), Postives = 105/140 (75.00%), Query Frame = 0 Query: 49 GELEIRPGGMFVQMRNSESSNRSSVSVP-TIRVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICLQVDKFSQQVT 187
GE+E+RPGGM VQ R SS SVP IRVRVK+GS +HE+ I+ Q++FGELKK+LS TG+H ++ ++IYK KERDSK +LD++ V+D SK++L+ED I++E+R LE+ KIA +K S +I+ I QV++ + QVT
Sbjct: 14 GEMELRPGGMVVQKRTDHSS-----SVPRGIRVRVKYGSVHHEISINSQSTFGELKKILSGATGVHHQDMQIIYKDKERDSKMFLDLSGVKDRSKLILIEDPISQEKRLLELRKIATKEKSSKAISDISFQVERLAGQVT 148
BLAST of hap2-g12996.t2 vs. Araport11
Match: | (Symbols: ATBAG4, BAG4 | BCL-2-associated athanogene 4 | chr3:19207029-19208178 REVERSE LENGTH=269) HSP 1 Score: 129.413 bits (324), Expect = 2.256e-35 Identity = 87/281 (30.96%), Postives = 142/281 (50.53%), Query Frame = 0 Query: 42 MNNNISPGELEIRPGGMFVQMRNSESSN----------RSSVSVPTIRVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQICLQVDKFSQQVTDLEAIASRGVELTDEHLDNLIGNLMTELVKLDEIVVDGDLKLQKRKQEKRVQSYIETLDMLRLRNTQ-LSSKSGKVPLQKQEHSYGKVTVPLQKQAKQRNLTELKHPFRDSDSFVVTTKWETFD* 311
M+N+ E E+RPGGM VQ R+ +S+ S+ TIR+ V GS++H++ IS A+FG++KK L ++TGL E K++++ ERD L A V+D SK+V+V + N+ + + +K ++ + +VDK S +V LE + G ++ D LM +L+KLD I +GD K+Q++ + +R+Q+ E +D L+ R + +S + + S+G + L P S S VT WE FD*
Sbjct: 2 MHNSTEESEWEVRPGGMLVQRRDDAASSDHKPLQDPDSASAAFAQTIRITVSHGSSHHDLHISAHATFGDVKKALVQKTGLEASELKILFRGVERDDAEQLQAAGVKDASKLVVVVEDTNKRVEQQPPVVTKEMEKAIAAVNAVTGEVDKLSDRVVALEVAVNGGTQVAVREFDMAAELLMRQLLKLDGIEAEGDAKVQRKAEVRRIQNLQEAVDKLKARCSNPFVDQSKAAAVSTEWESFGN------------GVGSLNPPPPASPSANVTQDWEKFD* 270
BLAST of hap2-g12996.t2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:4631038-4631641 FORWARD LENGTH=163) HSP 1 Score: 80.4925 bits (197), Expect = 3.552e-18 Identity = 46/125 (36.80%), Postives = 72/125 (57.60%), Query Frame = 0 Query: 52 EIRPGGMFVQMRNSESSNRSSVSVPTIRVRVKFGSTYHEVLISPQASFGELKKMLSERTGLHPEEQKLIYKKKERDSKGYLDVARVRDGSKIVLVEDIINRERRCLEMLKIAKFQKDSNSIAQIC 176
E+RPGGM VQ R + S+ I +RV + +H++ I ++FGELK +LS TGL P++Q+L++K KER+ YL + V D K++L+ED ++++ L D NSI+ C
Sbjct: 50 ELRPGGMLVQKR------QESIGEDLISIRVSTFAHFHDLSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKEREDHEYLHMVGVGDKDKVLLLEDPGFKDKKLL----------DLNSISTTC 158 The following BLAST results are available for this feature:
BLAST of hap2-g12996.t2 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of hap2-g12996.t2 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs UniProt Swissprot) Total hits: 4 Position : 0 Zoom : x 1
BLAST of hap2-g12996.t2 vs. Araport11
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus garrawayi UQ v1.0 proteins
Date Performed: 2024-10-02 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >hap2-g12996.t2_Cgarrawayi-UQ_v1 ID=hap2-g12996.t2_Cgarrawayi-UQ_v1; Name=hap2-g12996.t2; organism=Citrus garrawayi; type=mRNA; length=933bpback to top protein sequence of hap2-g12996.t2_Cgarrawayi-UQ_v1 >hap2-g12996.t2_Cgarrawayi-UQ_v1 ID=hap2-g12996.t2_Cgarrawayi-UQ_v1; Name=hap2-g12996.t2_Cgarrawayi-UQ_v1; organism=Citrus garrawayi; type=polypeptide; length=311bpback to top mRNA from alignment at hap2-C.garr_05:6737939..6739346- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=1408bp; location=Sequence derived from: hap2-C.garr_05:6737939..6739346- (Citrus garrawayiback to top Coding sequence (CDS) from alignment at hap2-C.garr_05:6737939..6739346- >hap2-g12996.t2_Cgarrawayi-UQ_v1 ID=hap2-g12996.t2_Cgarrawayi-UQ_v1; Name=hap2-g12996.t2; organism=Citrus garrawayi; type=CDS; length=933bp; location=Sequence derived from: hap2-C.garr_05:6737939..6739346- (Citrus garrawayiback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|