hap2-g22591.t2 | Citrus Genome Database

Transcript Overview


Name	hap2-g22591.t2
Unique Name	hap2-g22591.t2_Cgarrawayi-UQ_v1
Type	mRNA
Organism	Citrus garrawayi ()
Sequence length	993

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Citrus garrawayi genome v1.0 (UQ)	2024-01-23
InterProScan Analysis for Citrus garrawayi UQ v1.0 proteins	2024-10-02
Blastp of Citrus garrawayi UQ v1.0 proteins vs UniProt TrEMBL	2024-10-02
Blastp of Citrus garrawayi UQ v1.0 proteins vs UniProt Swissprot	2024-10-02
Blastp of Citrus garrawayi UQ v1.0 proteins vs Araport11	2024-10-02

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
cccgaL330	Citrus clementina genome v1.0 (JGI)	Citrus clementina
ccrcgaL0500	Citrus australasica CRC3672 genome v1	Citrus australasica
caucgaL686	Citrus australis genome v1.0 (UQ)	Citrus australis
ccrcgaL0968	Citrus australasica CRC3672 genome v1	Citrus australasica
cgacgaL216	Citrus garrawayi genome v1.0 (UQ)	Citrus garrawayi
cgacsR0593	Citrus sinensis genome v1.1 (JGI)	Citrus sinensis
cgacsR0594	Citrus sinensis genome v1.1 (JGI)	Citrus sinensis
cgacmR451	Citrus maxima (C. grandis) genome v1.0	Citrus maxima
cgacgaR484	Citrus garrawayi genome v1.0 (UQ)	Citrus garrawayi
cgacgaR506	Citrus garrawayi genome v1.0 (UQ)	Citrus garrawayi
cgacmjR436	Citrus maxima Cupi Majiayou v1.0 genome	Citrus maxima
cgacguR0550	Citrus glauca genome v1.0 (UQ)	Citrus glauca
cgacguR0573	Citrus glauca genome v1.0 (UQ)	Citrus glauca
cgacleR0571	Citrus limon cv. Eureka genome v1.0	Citrus limon
cgacleR0577	Citrus limon cv. Eureka genome v1.0	Citrus limon
cgacleR0591	Citrus limon cv. Eureka genome v1.0	Citrus limon
cgadvaR229	Citrus sinensis cv. Valencia DVS_A genome v1.0	Citrus sinensis
cgadvbR234	Citrus sinensis cv. Valencia DVS_B genome v1.0	Citrus sinensis
cgadvbR251	Citrus sinensis cv. Valencia DVS_B genome v1.0	Citrus sinensis
cgafhsR415	Fortunella hindsii S3y-45 genome v2.0	Fortunella hindsii
cgaswoR341	Citrus sinensis Di-Haploid Sweet Orange (DHSO) v3.0 (HZAU)	Citrus sinensis
cgazkR473	Poncirus trifoliata acc. ZK8 v1.0 (HZAU)	Poncirus trifoliata

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
hap2-g22591	hap2-g22591_Cgarrawayi-UQ_v1	Citrus garrawayi	gene

The following start_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
hap2-g22591.t2.start1	hap2-g22591.t2.start1_Cgarrawayi-UQ_v1	Citrus garrawayi	start_codon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
hap2-g22591.t2.CDS1	hap2-g22591.t2.CDS1_Cgarrawayi-UQ_v1	Citrus garrawayi	CDS
hap2-g22591.t2.CDS2	hap2-g22591.t2.CDS2_Cgarrawayi-UQ_v1	Citrus garrawayi	CDS
hap2-g22591.t2.CDS3	hap2-g22591.t2.CDS3_Cgarrawayi-UQ_v1	Citrus garrawayi	CDS
hap2-g22591.t2.CDS4	hap2-g22591.t2.CDS4_Cgarrawayi-UQ_v1	Citrus garrawayi	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
hap2-g22591.t2.exon1	hap2-g22591.t2.exon1_Cgarrawayi-UQ_v1	Citrus garrawayi	exon
hap2-g22591.t2.exon2	hap2-g22591.t2.exon2_Cgarrawayi-UQ_v1	Citrus garrawayi	exon
hap2-g22591.t2.exon3	hap2-g22591.t2.exon3_Cgarrawayi-UQ_v1	Citrus garrawayi	exon
hap2-g22591.t2.exon4	hap2-g22591.t2.exon4_Cgarrawayi-UQ_v1	Citrus garrawayi	exon

The following intron feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
hap2-g22591.t2.intron1	hap2-g22591.t2.intron1_Cgarrawayi-UQ_v1	Citrus garrawayi	intron
hap2-g22591.t2.intron2	hap2-g22591.t2.intron2_Cgarrawayi-UQ_v1	Citrus garrawayi	intron
hap2-g22591.t2.intron3	hap2-g22591.t2.intron3_Cgarrawayi-UQ_v1	Citrus garrawayi	intron

The following stop_codon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
hap2-g22591.t2.stop1	hap2-g22591.t2.stop1_Cgarrawayi-UQ_v1	Citrus garrawayi	stop_codon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
hap2-g22591.t2_Cgarrawayi-UQ_v1	hap2-g22591.t2_Cgarrawayi-UQ_v1	Citrus garrawayi	polypeptide
hap2-g22591.t2_Cgarrawayi-UQ_v1	hap2-g22591.t2_Cgarrawayi-UQ_v1-protein	Citrus garrawayi	polypeptide

Homology

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BLAST of hap2-g22591.t2 vs. ExPASy TrEMBL (2024)
Match: tr|V4RPM0|V4RPM0_CITCL (TF-B3 domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10028901mg PE=4 SV=1)

HSP 1 Score: 598.586 bits (1542), Expect = 0.000e+0
Identity = 291/330 (88.18%), Postives = 297/330 (90.00%), Query Frame = 0

Query:    1 MAGNRATEPFRFFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQCENSTKKLGFRASCKNQMHHSQGSLHRKRLLNGTAGNFSRPSSAVQDDHQTEFVDGQALSALLEEMGISISRSCLSLEVEERQRVITAARLFEPRNPSFMVIVRGNERRKACLFIPIKFVNNYLCEVPKFIKVQASDGREWSIQTRYSHTGALYLSGGWPGFVVDMNLDRGDICIFELIKMDDVIMKVSVFSASKECK 330
            MAG+RATEPFRFFRVILPSILE KKL                      TPNGCVWQVGVTKDKGKI LDDGWH FV DHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDY YHRGQPNKE+QNSIHDD+MQCENSTKKLG RASCKNQMHHSQGS HRKRLLNGTAGNFS PSSA QDDHQTEFVDGQALSALLEEMGISISRSCLSLE EERQRVITAARLFEPRNPSFMVIVRGNERRKACLFIPIKFVNNYLC+VPKFIKVQASDGREWSIQTRYSHTGAL+LSGGWPGFVVD+NLDRGDICIF LIKMDDVIMKVSVFSASKECK
Sbjct:    1 MAGSRATEPFRFFRVILPSILEQKKL----------------------TPNGCVWQVGVTKDKGKILLDDGWHDFVKDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYAYHRGQPNKEKQNSIHDDKMQCENSTKKLGSRASCKNQMHHSQGSFHRKRLLNGTAGNFSGPSSAAQDDHQTEFVDGQALSALLEEMGISISRSCLSLEAEERQRVITAARLFEPRNPSFMVIVRGNERRKACLFIPIKFVNNYLCKVPKFIKVQASDGREWSIQTRYSHTGALHLSGGWPGFVVDINLDRGDICIFGLIKMDDVIMKVSVFSASKECK 308

[Close]

BLAST of hap2-g22591.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2H5PHP6|A0A2H5PHP6_CITUN (TF-B3 domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_137490 PE=4 SV=1)

HSP 1 Score: 550.051 bits (1416), Expect = 0.000e+0
Identity = 262/267 (98.13%), Postives = 262/267 (98.13%), Query Frame = 0

Query:    1 MAGNRATEPFRFFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQCENSTKKLGFRASCKNQMHHSQGSLHRKRLLNGTAGNFSRPSSAVQDDHQTEFVDGQALSALLEEMGISISRSCLSLEVEERQRVITAARLFEPRNPSFMVIVRGNERRKACLFIPIKFVNNYLCEVPKFIKVQA 267
            MAGNRATEPFRFFRVILPSILE KKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFV DHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQCENSTKKLGFRASCKNQMHHSQGSLH KRLLNGTAGNFSRPSSAVQDDHQTEFVDGQALSALLEEMGISISRSCLSLE EERQRVITAARLFEPRNPSFMVIVRGNERRKA LFIPIKFVNNYLCEVPKFIKVQA
Sbjct:   18 MAGNRATEPFRFFRVILPSILEQKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVKDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQCENSTKKLGFRASCKNQMHHSQGSLHYKRLLNGTAGNFSRPSSAVQDDHQTEFVDGQALSALLEEMGISISRSCLSLEAEERQRVITAARLFEPRNPSFMVIVRGNERRKAYLFIPIKFVNNYLCEVPKFIKVQA 284

[Close]

BLAST of hap2-g22591.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A067EAH5|A0A067EAH5_CITSI (TF-B3 domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g038266mg PE=4 SV=1)

HSP 1 Score: 497.664 bits (1280), Expect = 2.636e-176
Identity = 236/241 (97.93%), Postives = 236/241 (97.93%), Query Frame = 0

Query:   27 KIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQCENSTKKLGFRASCKNQMHHSQGSLHRKRLLNGTAGNFSRPSSAVQDDHQTEFVDGQALSALLEEMGISISRSCLSLEVEERQRVITAARLFEPRNPSFMVIVRGNERRKACLFIPIKFVNNYLCEVPKFIKVQA 267
            KIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFV DHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQCENSTKKLGFRASCKNQMHHSQGSLH KRLLNGTAGNFSRPSSAVQDDHQTEFVDGQALSALLEEMGISISRSCLSLE EER RVITAARLFEPRNPSFMVIVRGNERRKA LFIPIKFVNNYLCEVPKFIKVQA
Sbjct:    1 KIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVKDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQCENSTKKLGFRASCKNQMHHSQGSLHYKRLLNGTAGNFSRPSSAVQDDHQTEFVDGQALSALLEEMGISISRSCLSLEAEERHRVITAARLFEPRNPSFMVIVRGNERRKAYLFIPIKFVNNYLCEVPKFIKVQA 241

[Close]

BLAST of hap2-g22591.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2H5PIC2|A0A2H5PIC2_CITUN (TF-B3 domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_137490 PE=4 SV=1)

HSP 1 Score: 493.426 bits (1269), Expect = 4.750e-174
Identity = 240/267 (89.89%), Postives = 240/267 (89.89%), Query Frame = 0

Query:    1 MAGNRATEPFRFFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQCENSTKKLGFRASCKNQMHHSQGSLHRKRLLNGTAGNFSRPSSAVQDDHQTEFVDGQALSALLEEMGISISRSCLSLEVEERQRVITAARLFEPRNPSFMVIVRGNERRKACLFIPIKFVNNYLCEVPKFIKVQA 267
            MAGNRATEPFRFFRVILPSILE KKL                      TPNGCVWQVGVTKDKGKIWLDDGWHHFV DHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQCENSTKKLGFRASCKNQMHHSQGSLH KRLLNGTAGNFSRPSSAVQDDHQTEFVDGQALSALLEEMGISISRSCLSLE EERQRVITAARLFEPRNPSFMVIVRGNERRKA LFIPIKFVNNYLCEVPKFIKVQA
Sbjct:   18 MAGNRATEPFRFFRVILPSILEQKKL----------------------TPNGCVWQVGVTKDKGKIWLDDGWHHFVKDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQCENSTKKLGFRASCKNQMHHSQGSLHYKRLLNGTAGNFSRPSSAVQDDHQTEFVDGQALSALLEEMGISISRSCLSLEAEERQRVITAARLFEPRNPSFMVIVRGNERRKAYLFIPIKFVNNYLCEVPKFIKVQA 262

[Close]

BLAST of hap2-g22591.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2H5PHN8|A0A2H5PHN8_CITUN (TF-B3 domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_137460 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 6.417e-80
Identity = 158/345 (45.80%), Postives = 209/345 (60.58%), Query Frame = 0

Query:    2 AGNRATEPFRFFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQCENSTKKLGFRASCKNQMHHSQ---GSLHRKRLLNG----------------TAGN-FSRPSSAVQDDHQTEFVDGQALSALLEEMGISISRSCLSLEVEERQRVITAARLFEPRNPSFMVIVRGNERRKACLFIPIKFVNNYLCEVPKFIKVQASDGREWSIQTRYSHTGALYLSGGWPGFVVDMNLDRGDICIFELIKMDDVIMKVSVFSAS 326
             GNR  E   FF+VILPS ++ KKL+IP+ FV RFG +ELS+ ATL  PNG VWQVG+ KD  KIWL DGW +F   HSI V YFLVFKYAKNSTFDVL+FDMTACEIDYPY     + EE  S   DEM+ ENS + L F       +  +Q   GS   K+ + G                T GN   +   A   + +T+  DG     + EEMGI +S     L VEERQ ++TA RLF+P+NPSF+ I+R +++R + +++P KF   +L    + IK+Q SDG+EW  Q  +S      + GGWP F    NL +G +C+FELIK  D+++KVS+ ++S
Sbjct:  388 GGNRRAETSHFFKVILPSTVQEKKLRIPRKFVKRFG-DELSAVATLNVPNGRVWQVGLRKDGRKIWLQDGWDNFAEYHSIAVGYFLVFKYAKNSTFDVLVFDMTACEIDYPY-----DYEETESEEGDEMETENSVEILSFTKMNTPPVQQNQVKPGSKPEKKKIGGIKLETATNSREKKRCPTHGNEHGKLKKAAYHEVETDSSDG---DQVFEEMGIFMSEGHRYLSVEERQSLVTAVRLFKPQNPSFVDILR-SKKRYSYMYVPSKFSKKHLIRGTRSIKLQDSDGKEWPAQLTWS--SGCGIKGGWPAFSKYKNLKQGHVCVFELIKAKDILLKVSIHASS 720

HSP 2 Score: 179.874 bits (455), Expect = 3.521e-47
Identity = 110/325 (33.85%), Postives = 176/325 (54.15%), Query Frame = 0

Query:   12 FFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQCENSTKKL--GFRASCKNQMHHSQGSLHR----KRLLNGTAGNFSRPSSAVQDDHQTEFV------DGQALSALLEEMGISISRSCLSLEVEERQRVITAARLFEPRNPSFMVIVRGNE-RRKACLFIPIKFVNNYLCEVPKFIKVQASDGREWSIQTRYSHTGALYLSGGWPGFVVDMNLDRGDICIFELIKMDDVIMKVSVF 323
            F+++I+PSIL+ KKL+IP  FV +FG +ELSS A    P G +W V + K   ++W D GWH F+   SI   YFL+FKY  NS F+V IFD+   EI+YP    +P+  +Q  +  ++ + +NS+ ++     ASC +    +   L      K   + T+G         +D+H  E         G       +E+G+       ++  EE++R + AA +++  NP F VI+R +   R   L +P  F   YL  +  +I +  S+G++W ++  + + GA + S GWP FV + NLD  D+C+FELIK +DV +K ++F
Sbjct:   30 FYKLIVPSILQDKKLRIPDKFVQKFG-DELSSIAKFTIPGGRMWFVELKKCNKQLWFDIGWHEFIEHCSIHSGYFLIFKYQGNSNFNVYIFDLAISEIEYPSLE-EPSDSKQCHVPIEKDKEKNSSLRILPSLCASCPDPFSPATKVLDEGVCYKCNKDSTSGVKIEYLHIPKDEHNQETAFHCPQDKGIQFKNTSDEVGL-----WRAVTTEEKKRTVHAAEMYKSNNPLFRVILRPSYVYRTLLLHVPTSFARKYLNGIKGYITIIDSNGKQWPVRCIFKNGGAKF-SKGWPEFVWENNLDESDVCVFELIKSNDVTLKATIF 346

[Close]

BLAST of hap2-g22591.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5C7I5P8|A0A5C7I5P8_9ROSI (TF-B3 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_011419 PE=4 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 3.652e-75
Identity = 144/331 (43.50%), Postives = 197/331 (59.52%), Query Frame = 0

Query:    6 ATEPFRFFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQCE-----NSTKKLG-----FRASCKNQMHHSQGSLHRKRLLNGTAGNFSRPSSAVQDDHQTEFVDGQALSALLEEMGISISRSCLSLEVEERQRVITAARLFEPRNPSFMVIVRGNERRKACLFIPIKFVNNYLCEVPKFIKVQASDGREWSIQTRYSHTGALYLSGGWPGFVVDMNLDRGDICIFELIKMDDVIMKVSVFSAS 326
            A  PF FF+VILP+ LE KKL+IP+ FV +FG +ELS  A L+ PNG VW V +TKD  KIW   GW+ FV  HSICV YFLVFKY KNS FDVLIFD++ACEI YPY+ G   K ++N++     + E      ++  +G      +A CK ++                       SS+ +++ + +F D   L A+L++ GI++      +  EER+R ITA +LF+P+NPSFMVI+R +  RK  + +P KF    L    K+IK+Q SDG EWS+ T + +    Y+     G +   N D GDICIFELI+M +  +KVSVFSAS
Sbjct:   17 AETPFHFFKVILPATLEEKKLRIPEKFVRKFG-DELSDVAKLRVPNGRVWHVRLTKDGNKIWFHVGWNDFVKYHSICVGYFLVFKYGKNSNFDVLIFDVSACEIQYPYYCGGGLKNDENNLGSKRCKVEELDEIKTSDAIGDESEFKKAVCKVEI-----------------------SSSDEENERIKF-DILDLVAVLKDFGITVGCKFRYISAEERERAITAVKLFKPKNPSFMVILRPDNLRKGRVVVPTKFAKKCLSSKSKWIKLQDSDGSEWSVLTMW-YRKCCYMR-RLRGLLRKKNSDLGDICIFELIRMKE--LKVSVFSAS 318

[Close]

BLAST of hap2-g22591.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA39VJM1|A0AA39VJM1_ACESA (TF-B3 domain-containing protein OS=Acer saccharum OX=4024 GN=LWI29_020399 PE=4 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 6.209e-75
Identity = 144/331 (43.50%), Postives = 197/331 (59.52%), Query Frame = 0

Query:    6 ATEPFRFFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQCE-----NSTKKLG-----FRASCKNQMHHSQGSLHRKRLLNGTAGNFSRPSSAVQDDHQTEFVDGQALSALLEEMGISISRSCLSLEVEERQRVITAARLFEPRNPSFMVIVRGNERRKACLFIPIKFVNNYLCEVPKFIKVQASDGREWSIQTRYSHTGALYLSGGWPGFVVDMNLDRGDICIFELIKMDDVIMKVSVFSAS 326
            A  P  FF+VIL + L+ KKL+IP+ FV +FG +ELS  ATL+ PNG VW V +TKD  KIW   GW+ FV  HSIC  YFLVFKY KNS FDVLIFDMTACEI YPY+ G   K ++N++     + E      ++  +G      +A CK ++                       SS+ +++ + +F DG    ALL+++G +  R+  ++  EER R ITA +LF P+NPSFMVI+R +  +++   +P KF    L    K+IK+Q SDG EWS+ T +        S G  G + + NLD GDICIFELI+M + ++KVSVFSAS
Sbjct:   16 AETPSHFFKVILAATLQDKKLRIPEKFVRKFG-DELSDVATLRIPNGRVWHVRLTKDGKKIWFHVGWNDFVKYHSICAGYFLVFKYGKNSNFDVLIFDMTACEIQYPYYCGGGLKNDENNLGSKRCKVEELDEIKTSDAIGDDSEFKKAVCKVEV-----------------------SSSDEENERIKF-DGLDYQALLKDIGSTGGRNFRNISGEERVRAITAVKLFRPKNPSFMVILRPDNLQRSRAVVPTKFAKKCLSSDSKWIKLQDSDGSEWSVLTMWYGKCCYMRSLG--GLLREKNLDLGDICIFELIRMKE-LLKVSVFSAS 318

[Close]

BLAST of hap2-g22591.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5C7I6J6|A0A5C7I6J6_9ROSI (TF-B3 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_011423 PE=4 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.399e-74
Identity = 143/331 (43.20%), Postives = 196/331 (59.21%), Query Frame = 0

Query:    6 ATEPFRFFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQCE-----NSTKKLG-----FRASCKNQMHHSQGSLHRKRLLNGTAGNFSRPSSAVQDDHQTEFVDGQALSALLEEMGISISRSCLSLEVEERQRVITAARLFEPRNPSFMVIVRGNERRKACLFIPIKFVNNYLCEVPKFIKVQASDGREWSIQTRYSHTGALYLSGGWPGFVVDMNLDRGDICIFELIKMDDVIMKVSVFSAS 326
            A  P  FF+VIL + L+ KKL+IP+ FV +FG +ELS  ATL  PNG +W V +TKD  KIW   GW+ FV  HSIC  YFLVFKY KNS FDVLIFDMTACEI YPY+ G   K ++N++     + E      ++  +G      +A CK ++                       SS+ +++ + +F DG    ALL+++G +  R+  ++  EER R ITA +LF P+NPSFMVI+R +  +++   +P KF    L    K+IK+Q SDG EWS+ T +        S G  G + + NLD GDICIFELI+M + ++KVSVFSAS
Sbjct:   16 AETPSHFFKVILAATLQDKKLRIPEKFVRKFG-DELSDVATLTVPNGRIWHVRLTKDGKKIWFHVGWNDFVNYHSICAGYFLVFKYGKNSNFDVLIFDMTACEIQYPYYCGGGLKNDENNLGSKRCKVEELDEIKTSDAIGDDSEFKKAVCKVEV-----------------------SSSDEENERIKF-DGLDYQALLKDIGSTGGRNFRNISGEERVRAITAVKLFRPKNPSFMVILRPDNLQRSRAVVPTKFAKKCLSSDSKWIKLQDSDGSEWSVLTMWYGKCCYMRSLG--GLLREKNLDLGDICIFELIRMKE-LLKVSVFSAS 318

[Close]

BLAST of hap2-g22591.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A067EMQ5|A0A067EMQ5_CITSI (TF-B3 domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g0434992mg PE=4 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 1.525e-74
Identity = 144/321 (44.86%), Postives = 193/321 (60.12%), Query Frame = 0

Query:   27 KIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQCENSTKKLGFRASCKNQMHHSQ---GSLHRKRLLNG----------------TAGN-FSRPSSAVQDDHQTEFVDGQALSALLEEMGISISRSCLSLEVEERQRVITAARLFEPRNPSFMVIVRGNERRKACLFIPIKFVNNYLCEVPKFIKVQASDGREWSIQTRYSHTGALYLSGGWPGFVVDMNLDRGDICIFELIKMDDVIMKVSVFSASK 327
            +IP+ FV RFG +ELS+ ATL  PNG VWQVG+ KD  KIWL DGW +F   HSI V YFLVFKYAKNSTFDVL+FDMTACEIDYPY     + EE  S   DEM+ ENS + L F       +  +Q   GS   K+ + G                T GN   +   A   + +T+  DG     + EEMGI +S     L VEERQ ++TA RLF+P+NPSF+ I+R +++R + +++P KF   +L    + IK+Q SDG+EW  Q  +S      + GGWP F    NL +G +C+FELIK  D+++KVS+ ++S+
Sbjct:    1 RIPRKFVKRFG-DELSAVATLNVPNGRVWQVGLRKDGRKIWLQDGWDNFAEYHSIAVGYFLVFKYAKNSTFDVLVFDMTACEIDYPY-----DYEETESEEGDEMETENSVEILSFTKMNTPPVQENQVKPGSKPEKKKIGGIKLETATNSREKKRCPTHGNEHGKLKKAAYHEVETDSSDG---DQVFEEMGIFMSEGHRYLSVEERQSLVTAVRLFKPQNPSFVDILR-SKKRYSYMYVPSKFSKKHLIRGTRSIKLQDSDGKEWPAQLTWS--SGCGIKGGWPAFSKYKNLKQGHVCVFELIKAKDILLKVSIHASSE 309

[Close]

BLAST of hap2-g22591.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5C7I772|A0A5C7I772_9ROSI (TF-B3 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_011436 PE=4 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.835e-74
Identity = 131/322 (40.68%), Postives = 193/322 (59.94%), Query Frame = 0

Query:    9 PFRFFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQCENSTKKLGFRASCKNQMHHSQGSLHRKRLLNGTAGNFSRPSSAV----QDDHQTEFVDGQALSALLEEMGISISRSCLSLEVEERQRVITAARLFEPRNPSFMVIVRGNERRKACLFIPIKFVNNYLCEVPKFIKVQASDGREWSIQTRYSHTGALYLSGGWPGFVVDMNLDRGDICIFELIKMDDVIMKVSVFSAS 326
            P  FF+VIL S LE KKL++P+ FV +F  +ELS+ AT+ T NG VW+VG++KD+GKIW DDGW  F+  +SI + YFLVF+Y K S F V+IFD +  E+ YPY+  +P KEE N IH DE++ +   +     A+        +  +      N       +  +      +D+  T+  D   L ALLE+  I ISR+      +ER R+ T A+  +PRNPSFM+++  +      +++P KF N YL    + IKV+AS+GREW ++  +++ G   L  GW  F+ DM L  GDIC+FELI+M+D++++VSVF  S
Sbjct:    7 PQHFFKVILASTLEEKKLRLPEKFVRKF-MDELSAFATITTHNGRVWRVGLSKDEGKIWFDDGWQDFMEYYSIRLGYFLVFEYEKRSNFHVMIFDTSTFEVSYPYNFEEPKKEE-NLIHRDEIEKDEDHRNQKGSANLDGSRPRHERDIKEMLSKNCKMKELVQVKTDTADNGEDEKLTQISDLHKLKALLEDKRIFISRNYNFSSAKERDRLFTLAKSLKPRNPSFMIVLWESHLYSHTVYLPAKFTNKYLTRDAEHIKVRASNGREWLVRIGWNNGGCNALR-GWTNFLNDMKLKMGDICVFELIRMEDLLLEVSVFKES 325

[Close]

BLAST of hap2-g22591.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q8L3W1|VRN1_ARATH (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.537e-47
Identity = 108/350 (30.86%), Postives = 173/350 (49.43%), Query Frame = 0

Query:    9 PFRFFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDY-----------PYHRGQ-------------------PNKEEQNSIHDDEMQCENSTKKLGFRASCKNQMHHSQGSLHRKRLLNGTAGNFSRP----SSAVQDDHQTEFVDGQALSALLEEMGISISRSCLSLEVEERQRVITAARLFEPRNPSFMVIVRGNERRKAC-LFIPIKFVNNYLCEVPKFIKVQASDGREWSIQTRYSHTGALYLSGGWPGFVVDMNLDRGDICIFELIKMDDVIMKVSVF 323
            PF F ++I  S ++ K+L++P  FV +F  +ELS    L  P+G VW+VG+ K   KIW  DGW  FV  +SI + Y L+F+Y  NS F V IF+++  EI+Y            + R +                   P+   ++++  ++    ++ + L F    K +       + +KR   G     + P    SSA +DD      D +  S   E    S S    ++  EER+R I AA+ FEP NP F V++R +   + C +++P  F   YL  +  FIKVQ ++ ++W ++  Y   G    S GW  F ++ NL  GD+C+FEL++  D ++KV+ F
Sbjct:    4 PF-FHKLIFSSTIQEKRLRVPDKFVSKFK-DELSVAVALTVPDGHVWRVGLRKADNKIWFQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRARLFEDLEDEDAEVIFPSSVYPSPLPESTVPANKGYASSAIQTL-FTGPVKAEEPTPTPKIPKKR---GRKKKNADPEEINSSAPRDD------DPENRSKFYE----SASARKRTVTAEERERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAE-KQWPVRCLYK-AGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAF 335

[Close]

BLAST of hap2-g22591.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q10GM3|Y3222_ORYSJ (B3 domain-containing protein Os03g0622200 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0622200 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.395e-22
Identity = 82/309 (26.54%), Postives = 131/309 (42.39%), Query Frame = 0

Query:   24 KKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTK-DKGKIWLDDGWHHFVTDHSICVAYFLVFKYAK-NSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQCENSTKKLGFRASCKNQMHHSQGSLHR----------KRLLNGTAGNFSRPSSAVQDDHQTEFVDGQALSALLEEMGISISRSC--LSLEVEERQRVITAARLFEPRNPSFMVIVRGNERR--KACLF-IPIKFVNNYLCEVPKFIKVQ-ASDGREWSIQTRYSHTGALYLSGGWPGFVVDMNLDRGDICIFELIKMD 314
            + + +P  F   F    +S +  L++P+G  W +GV   D G++ L  GW  FV  + I     L+F+Y+  +S+FDVLIFD + CE   P+  G        +    E    N  +            HH + +LHR          KR L      FS  + A ++D + E V   A      E   S        +L  E+R+ +       +P NP F+ ++  +  R  K C+  +  +F   YL  V + + ++ AS G EW +   +      +   GW  F  D  L   D+C+FEL  +D
Sbjct:   42 ESMTVPARFANNFN-GHISEEVNLRSPSGETWSIGVANSDAGELVLQPGWKEFVDGNGIEEGDCLLFRYSGVSSSFDVLIFDPSGCEKASPHFVGSHGFGRAENSAGAEQGGRNGRRTPPIVDGDNGHRHHLEMTLHRNSCRSIPRACKRSL------FSDETEAKENDGEDEDVVAAAEGGRYGEYYFSRHGRVAEYNLREEDREEISRVPVPVQPGNPVFVQVIHSSHVRSSKYCIVGVSPEFAGKYLGAVEREVVLERASRGGEWHVPFVHRQNTRGFYGAGWRQFAGDNRLVAHDVCLFELTMVD 343

[Close]

BLAST of hap2-g22591.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q84R27|Y3896_ARATH (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana OX=3702 GN=At3g18960 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 7.569e-20
Identity = 42/102 (41.18%), Postives = 65/102 (63.73%), Query Frame = 0

Query:   11 RFFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYP 112
            +FF+++LPS ++ K +KIP  FV   G  +LS   TL+TP G    + + +   +IW  +GW  F   HSI   +FL+F+Y +NS+F V+IF+++ACE  YP
Sbjct:   29 KFFKLVLPSTMKDKMMKIPPRFVKLQG-SKLSEVVTLETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYP 129

[Close]

BLAST of hap2-g22591.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9XIB5|REM19_ARATH (B3 domain-containing protein REM19 OS=Arabidopsis thaliana OX=3702 GN=REM19 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 9.937e-20
Identity = 42/124 (33.87%), Postives = 72/124 (58.06%), Query Frame = 0

Query:  201 SISRSCLSLEVEERQRVITAARLFEPRNPSFMVIVRGNERRKAC-LFIPIKFVNNYLCEVPKFIKVQASDGREWSIQTRYSHTGALYLSGGWPGFVVDMNLDRGDICIFELIKMDDVIMKVSVF 323
            S S    ++  EER+R + AA+ FEP NP F V++R +   + C +++P  F   YL  +  FIK+Q  + ++W ++  Y   G    S GW  F ++ N+  GD+C+FEL++  D +++V+ F
Sbjct:   99 SASARKRTVTAEERERAVNAAKTFEPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGE-KQWPVRCLY-KAGRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAF 220

[Close]

BLAST of hap2-g22591.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9ZSH7|Y4158_ARATH (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01580 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.704e-19
Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = 0

Query:   11 RFFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYP 112
            +FF+++LPS ++ K ++IP  FV   G  +LS   TL TP G    + + +   +IW  +GW  F   HSI   +FL+F+Y KNS+F V+IF+ +ACE +YP
Sbjct:   29 KFFKLVLPSTMKDKMMRIPPRFVKLQG-SKLSEVVTLVTPAGYKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYP 129

[Close]

BLAST of hap2-g22591.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q2R9D2|Y1176_ORYSJ (B3 domain-containing protein Os11g0197600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0197600 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.189e-19
Identity = 93/370 (25.14%), Postives = 150/370 (40.54%), Query Frame = 0

Query:   12 FFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDE---MQCENSTKKLG---------------------------FRAS-----CKNQMHHSQGSLHRKRLLNGTAGNFSRPSSAVQDDHQTEFVDGQA------LSALLEEMGISISRSCLSLEVEERQRVITAA---------RLFEPRNPSFMVIVRGNERRKACLF--IPIKFVNNYLCEVPKFIKVQASDGREWSIQ-TRYSHTGALYLSGGWPGFVVDMNLDRGDICIFELIKMDDVIMKVSVFSASKE 328
            FFRV+L ++  L+++KIP +F  +    + +   +L   +G  W   +T D    +   GW  FV D+SI    FLVF Y K S F V +F+ +  +    +    P+K        DE   +    +T+K+                            F+ S     C++      G+   K  +  T+ N +R SS   D+  +             LS  +   G  +S+    L V  ++R +T A         R F+ +NP F V +          F  IP +FV   L    K I +    G+ W +    YS       SGGW  F V  NL++ D+C+FEL++ D++  KV ++    E
Sbjct:   32 FFRVLL-TLQSLERMKIPSSF-NQCLQNQPTGMVSLVDRSGNKWSAELTSDSEGFFFVHGWKEFVRDNSIQCGQFLVFTYDKRSQFSVTVFEPSGIDKISTFS-AHPSKNVIIKTESDEGGMVTAAITTEKMAPALKENNGITGKRTRDVDYLMEDRVVVFKKSSEANVCESSRRKRAGASAGKSKVTSTSHNSTRGSSCSSDEDNSSSKSPNPPFLMRFLSGEVSRRGRCVSKGQRQLTVISQRRPVTEAEKDHALQRAREFKSKNP-FAVQIMMESYVYVGFFMNIPCEFVRECLPHTNKRITLWDPQGKAWEVNYVYYSDRSVGSFSGGWGKFAVGNNLEKFDVCVFELVQKDNI--KVHIYRVVPE 395

[Close]

BLAST of hap2-g22591.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9XIB4|Y1475_ARATH (B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana OX=3702 GN=At1g49475 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.077e-17
Identity = 45/122 (36.89%), Postives = 71/122 (58.20%), Query Frame = 0

Query:   11 RFFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQ 132
            +F ++IL S +  K +K+P  FV RFG  +L+ + TL+TP G    + + +   ++W + GW  F   HS+   +FL F Y  +S F V+IFD++A EI+YP      N+EE   + DD+ Q
Sbjct:   33 KFIKIILLSRIIEKMMKVPARFV-RFG-PKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKGWSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPLDDTDDNREE---VMDDDEQ 149

[Close]

BLAST of hap2-g22591.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q851V5|Y3216_ORYSJ (Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0621600 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.421e-16
Identity = 83/337 (24.63%), Postives = 131/337 (38.87%), Query Frame = 0

Query:   12 FFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQCENSTKKLGFRASCKNQMHHSQG---SLHRKRLLNGTAGNFSRPSSAVQDDHQTEFVDGQALSALLEEMGIS------------ISRSCLSLEVEERQRVITAARLFEPRNPSFMVIVRGNE-----------RRKACLFIPIKFVNNYLCEVPKFIKVQASDGREWSIQTRYSHTGALYLSGGWPGFVVDMNLDRGDICIFELIKMDDVIMKVSV 322
            FF+V++    E  ++ IP  F+  F   ++     L+  +GC + V VTK+ GKI L  GW  FVT H + +  FLVF Y   S   VLIF  + CE                              K+  R++ KN  H  +     LH     N        P +  + + Q +  + +  +A +EE+ +             I      L   ++Q++ +         P +  I+R +            R  A +++P K +N  L             G+ W +  R   T    LS GW  F  + NL  GDIC+FEL+K  +  M V +
Sbjct:  734 FFKVMIGRFRE--RMIIPNEFLQYF-RGKIPRTIKLQLRDGCTYDVQVTKNLGKISLQSGWKAFVTAHDLQMGDFLVFSYDGISKLKVLIFGPSGCE------------------------------KVHSRSTLKNATHCGEKWEEPLHISS--NSHDLPVKSPQNVSKSEKQWDSSEQENDTANIEEVALQGDDLQGHPVLNCILPKHTRLTDMQKQQLESKVGAIHSEIPIYGCILRKSRVHGKSQTVDICREYADVYLPFKELNMTL----------QRHGKNWEVLCRTKDTRTKRLSTGWSRFAQENNLQVGDICLFELLKKKEYSMNVHI 1025

HSP 2 Score: 77.7962 bits (190), Expect = 1.826e-14
Identity = 99/386 (25.65%), Postives = 156/386 (40.41%), Query Frame = 0

Query:   12 FFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACE----------IDYPYHRGQPNKEEQN---SIHDDE------MQCENSTK--KLGF----------------RASC-----KNQMHHSQGSLHRKRLLNG---TAGNFSRPSSAVQ-----DDHQTEFVDGQALSALLEEMGISISRSCLSLEVEERQRVITAARLFEPRNP---------------------SFMVIVRGNERRKACLFIPIKFVNNYLCEVPKFIKVQASDGREWSIQTRYSHTGALYLSGGWPGFVVDMNLDRGDICIFELIKMDDVIMKVSVFSAS 326
            FF+V++      K++ IP  F   F    +S    L+  +G  + V VTK    + L  GW  FV  H + +  FLVFKY  +    VLIFD + CE          ID   H GQ  KE  +   S HD        MQ ++S+K  K+G                 R +C     + +M     ++H K  + G   T  N S     ++     DD    F +GQ L  +L     S        + + R ++  A+ L++ R P                     +F  ++ G  R +  + IP +F+  +  ++P+ IK+Q  DG  + +Q    + G + L  GW  FV   +L  GD  +F    +    +KV +F  S
Sbjct:  453 FFKVMIGDFH--KRMTIPDKFARHFK-GVISKTIKLEPRSGYTFDVQVTKKLNILVLGSGWESFVNAHDLNMGDFLVFKYNGDFLLQVLIFDPSGCEKSTSCSMENAID---HVGQGWKEHNDISTSYHDQPKGNKHWMQKDSSSKGNKIGNTRSSNTPSKFSGCILPRGTCLPVVQEKKMKEKIQAIHSKTPMYGNVMTKCNVSGSPCVLEITQLYDDAYLPFNNGQEL--MLRHRDKSWKVRFYRFKNKSR-KLTQASSLYKMRRPGARCREGHAHFNGNHIDGQYKNFFKVMIGRFRER--MIIPNEFLQYFRGKIPRTIKLQLRDGCTYDVQVT-KNLGKISLQSGWKAFVTAHDLQMGDFLVFSYDGISK--LKVLIFGPS 824

HSP 3 Score: 68.1662 bits (165), Expect = 2.734e-11
Identity = 73/291 (25.09%), Postives = 122/291 (41.92%), Query Frame = 0

Query:   12 FFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQCENSTKKLGFRASCKNQMHHSQGSLHRKRLLNGTAGNFSRPSSAVQDDHQTEFVDGQALSALLEEMGISISRSCLSLEVEERQRVITAARLFEPRNPSFMVIV-RGNERRKAC-LFIPIKFVNNYLCEVPKFIKVQASDGREWSIQTRYSHTGALYLSGGWPGFVVDMNL 300
            FF+V++      +++ IP  F   F  +++     LK  NG    V V K   K+ L  GW  F   H I +  FLVF+Y  NS F+V IFD + C +    H      +   ++  D ++            SC ++   +Q SL  +R         ++P   V D+   +     A S+  E+   + +     ++VEE  R I +       +P F+ ++ + N  R+ C + I  K+ N Y     + + +Q   G+ W ++   S      LS GW  F  D  L
Sbjct:  150 FFKVMIGGFR--RQMTIPYKFAENF-RDQIQGTIKLKARNGNTCSVLVDKCSNKLVLTKGWAEFANSHDIKMGDFLVFRYTGNSQFEVKIFDPSGC-VKAASHNAVNIGQHAQNMQGDPIEI----------LSCSDEHLRAQ-SLTTERQ--------NQPEKDVIDNCNKKMKTEHASSS--EDDQETPTAEVHRMKVEEMVRAIHS------NHPVFVAVMKKSNVTRQPCYVAISRKYANEYFPGGDQMLTLQ-RHGKRWQVKFCISKRKLRMLSKGWRKFTRDNEL 408

[Close]

BLAST of hap2-g22591.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q2QMT6|Y1208_ORYSJ (B3 domain-containing protein LOC_Os12g40080 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0591400 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.293e-16
Identity = 73/292 (25.00%), Postives = 122/292 (41.78%), Query Frame = 0

Query:   26 LKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYP--YHRGQPNKEEQNSIHDDEMQCENSTKKLGFRASCKNQMHHSQGSLHRKRLLNGTAGNFSRPSSAVQDDHQT-EFVDGQALSALLEEMGISISRSCLSLEVEERQRVITAARLFEPRNPSFMVIVRGNERRKACLFIPIKFVNNYLCEVPKFIKVQASDGRE--WSIQTRYSHTGALYLSGGWPGFVVDMNLDRGDICIFELIK 312
            + IP  F   FG  ++S    L+T NG  ++V V K+   + L  GW  F + + +     LVF Y+ NS F V I+D +ACE   P       P  ++++  H++  Q + + K              S G       +N       +P+  V    +  E VD   +    +    S+ R C ++   ++  V    +  +P+ P ++ ++         L I   +  +YL +  + IK+  S GR   W I           LS GW  F+ + +L  GDIC+FE  K
Sbjct:   39 VTIPAKFARNFG-GQMSGTVKLETRNGKTYEVQVAKELNNLVLRSGWERFASAYELEKGDILVFIYSGNSHFKVWIYDPSACEKGLPCIITEQLPRVQQRSISHNNHTQLKRNAKSAKLYVD-------SSGHSKETSEINPANSPSWKPTERVPSSEELDEPVDLANVQKATKSF-YSLPRMC-NMTSAQKAEVDALEKRIKPQIPFYITVMDKASATDGLLAISKDYAVSYLLDKNETIKLCHS-GRSMTWDISLDIDTDDQYALSTGWLDFIRNNHLQEGDICVFEASK 319

[Close]

BLAST of hap2-g22591.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q2QMT2|Y1223_ORYSJ (B3 domain-containing protein Os12g0592300 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0592300 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.181e-15
Identity = 89/328 (27.13%), Postives = 141/328 (42.99%), Query Frame = 0

Query:   11 RFFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVF----KYAKNSTFDVLIFDMTACEIDYPYHRGQPN-------KEEQNSIHDDEMQCENSTKKLG--FRASCKNQMHHSQGSLHRKRLLNGTAGNFSRPSSAVQDDHQTEFVDGQALSALLEEMGISISRSCLSLEVEERQRVITAARLFEPRNPSFMVIVRGNE-RRKACLFIPIKFVNNYLCEVPKFIKVQASDGRE-WSIQTRYSHTGALYLSGGWPGFVVDMNLDRGDICIFELIK-MDDVIMKVSV 322
            RFFR++         + IP+    RF   +++    LK P+G  W+V V K   ++ L  GW  F   H +     L F    +   + +FDVLIFD + CE    +  G+ N         EQ  + D E     ST  +G   +AS   +++    +  RK   +    N SR S    +  + E  D     A  E      SR    L  EER+ + +   L +P NP F+ +++  +  RK  L +P  F  ++L    + I +   + +E W ++  ++ T   +    W  F+ +  L  G ICIFEL+K    V M V V
Sbjct:   27 RFFRLMTGDFAH--GISIPEKVADRFS-GQITKGFNLKAPSGETWRVSVEKVADELILMSGWEDFAKAHELQENDLLFFTCNGRCNGSFSFDVLIFDASGCEKVSCFFIGKKNSIGGQTQNAEQYHLSDSEDTSTPSTFLVGSPHKASTSKKLNGKTKTNPRKEPED---PNSSR-SHVKHEMIEEEKSDDDDEHADYEHADYYYSRFANYLTGEEREEIFSLVSL-QPGNPVFVTVLQAPQIHRKGLLIVPSGFAADHLDSRSQEILLMRPNKKEKWYVKYYHASTTRGFNCQRWIKFIRENRLREGYICIFELMKGARRVTMTVHV 346

[Close]

BLAST of hap2-g22591.t2 vs. Araport11
Match: | (Symbols: REM39, VRN1 | REPRODUCTIVE MERISTEM 39, REDUCED VERNALIZATION RESPONSE 1 | chr3:6549077-6551568 REVERSE LENGTH=341)

HSP 1 Score: 164.466 bits (415), Expect = 7.805e-48
Identity = 108/350 (30.86%), Postives = 173/350 (49.43%), Query Frame = 0

Query:    9 PFRFFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDY-----------PYHRGQ-------------------PNKEEQNSIHDDEMQCENSTKKLGFRASCKNQMHHSQGSLHRKRLLNGTAGNFSRP----SSAVQDDHQTEFVDGQALSALLEEMGISISRSCLSLEVEERQRVITAARLFEPRNPSFMVIVRGNERRKAC-LFIPIKFVNNYLCEVPKFIKVQASDGREWSIQTRYSHTGALYLSGGWPGFVVDMNLDRGDICIFELIKMDDVIMKVSVF 323
            PF F ++I  S ++ K+L++P  FV +F  +ELS    L  P+G VW+VG+ K   KIW  DGW  FV  +SI + Y L+F+Y  NS F V IF+++  EI+Y            + R +                   P+   ++++  ++    ++ + L F    K +       + +KR   G     + P    SSA +DD      D +  S   E    S S    ++  EER+R I AA+ FEP NP F V++R +   + C +++P  F   YL  +  FIKVQ ++ ++W ++  Y   G    S GW  F ++ NL  GD+C+FEL++  D ++KV+ F
Sbjct:    4 PF-FHKLIFSSTIQEKRLRVPDKFVSKFK-DELSVAVALTVPDGHVWRVGLRKADNKIWFQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRARLFEDLEDEDAEVIFPSSVYPSPLPESTVPANKGYASSAIQTL-FTGPVKAEEPTPTPKIPKKR---GRKKKNADPEEINSSAPRDD------DPENRSKFYE----SASARKRTVTAEERERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAE-KQWPVRCLYK-AGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAF 335

[Close]

BLAST of hap2-g22591.t2 vs. Araport11
Match: | (Symbols: REM39, VRN1 | REPRODUCTIVE MERISTEM 39, REDUCED VERNALIZATION RESPONSE 1 | chr3:6548552-6551568 REVERSE LENGTH=372)

HSP 1 Score: 164.466 bits (415), Expect = 1.981e-47
Identity = 108/350 (30.86%), Postives = 173/350 (49.43%), Query Frame = 0

Query:    9 PFRFFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDY-----------PYHRGQ-------------------PNKEEQNSIHDDEMQCENSTKKLGFRASCKNQMHHSQGSLHRKRLLNGTAGNFSRP----SSAVQDDHQTEFVDGQALSALLEEMGISISRSCLSLEVEERQRVITAARLFEPRNPSFMVIVRGNERRKAC-LFIPIKFVNNYLCEVPKFIKVQASDGREWSIQTRYSHTGALYLSGGWPGFVVDMNLDRGDICIFELIKMDDVIMKVSVF 323
            PF F ++I  S ++ K+L++P  FV +F  +ELS    L  P+G VW+VG+ K   KIW  DGW  FV  +SI + Y L+F+Y  NS F V IF+++  EI+Y            + R +                   P+   ++++  ++    ++ + L F    K +       + +KR   G     + P    SSA +DD      D +  S   E    S S    ++  EER+R I AA+ FEP NP F V++R +   + C +++P  F   YL  +  FIKVQ ++ ++W ++  Y   G    S GW  F ++ NL  GD+C+FEL++  D ++KV+ F
Sbjct:    4 PF-FHKLIFSSTIQEKRLRVPDKFVSKFK-DELSVAVALTVPDGHVWRVGLRKADNKIWFQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRARLFEDLEDEDAEVIFPSSVYPSPLPESTVPANKGYASSAIQTL-FTGPVKAEEPTPTPKIPKKR---GRKKKNADPEEINSSAPRDD------DPENRSKFYE----SASARKRTVTAEERERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAE-KQWPVRCLYK-AGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAF 335

[Close]

BLAST of hap2-g22591.t2 vs. Araport11
Match: | (Symbols: REM7 | REPRODUCTIVE MERISTEM 7 | chr3:6542618-6543455 FORWARD LENGTH=194)

HSP 1 Score: 89.3521 bits (220), Expect = 6.289e-21
Identity = 42/102 (41.18%), Postives = 65/102 (63.73%), Query Frame = 0

Query:   11 RFFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYP 112
            +FF+++LPS ++ K +KIP  FV   G  +LS   TL+TP G    + + +   +IW  +GW  F   HSI   +FL+F+Y +NS+F V+IF+++ACE  YP
Sbjct:   29 KFFKLVLPSTMKDKMMKIPPRFVKLQG-SKLSEVVTLETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYP 129

[Close]

BLAST of hap2-g22591.t2 vs. Araport11
Match: | (Symbols: REM7 | REPRODUCTIVE MERISTEM 7 | chr3:6542618-6543568 FORWARD LENGTH=209)

HSP 1 Score: 89.3521 bits (220), Expect = 7.815e-21
Identity = 42/102 (41.18%), Postives = 65/102 (63.73%), Query Frame = 0

Query:   11 RFFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYP 112
            +FF+++LPS ++ K +KIP  FV   G  +LS   TL+TP G    + + +   +IW  +GW  F   HSI   +FL+F+Y +NS+F V+IF+++ACE  YP
Sbjct:   29 KFFKLVLPSTMKDKMMKIPPRFVKLQG-SKLSEVVTLETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYP 129

[Close]

BLAST of hap2-g22591.t2 vs. Araport11
Match: | (Symbols: RTV1 | related to vernalization1 1 | chr1:18314596-18315460 REVERSE LENGTH=226)

HSP 1 Score: 89.3521 bits (220), Expect = 1.025e-20
Identity = 42/124 (33.87%), Postives = 72/124 (58.06%), Query Frame = 0

Query:  201 SISRSCLSLEVEERQRVITAARLFEPRNPSFMVIVRGNERRKAC-LFIPIKFVNNYLCEVPKFIKVQASDGREWSIQTRYSHTGALYLSGGWPGFVVDMNLDRGDICIFELIKMDDVIMKVSVF 323
            S S    ++  EER+R + AA+ FEP NP F V++R +   + C +++P  F   YL  +  FIK+Q  + ++W ++  Y   G    S GW  F ++ N+  GD+C+FEL++  D +++V+ F
Sbjct:   99 SASARKRTVTAEERERAVNAAKTFEPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGE-KQWPVRCLY-KAGRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAF 220

[Close]

Query:  201 SISRSCLSLEVEERQRVITAARLFEPRNPSFMVIVRGNERRKAC-LFIPIKFVNNYLCEVPKFIKVQASDGREWSIQTRYSHTGALYLSGGWPGFVVDMNLDRGDICIFELIKMDDVIMKVSVF 323
            S S    ++  EER+R + AA+ FEP NP F V++R +   + C +++P  F   YL  +  FIK+Q  + ++W ++  Y   G    S GW  F ++ N+  GD+C+FEL++  D +++V+ F
Sbjct:   99 SASARKRTVTAEERERAVNAAKTFEPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGE-KQWPVRCLY-KAGRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAF 220

[Close]

Query:  201 SISRSCLSLEVEERQRVITAARLFEPRNPSFMVIVRGNERRKAC-LFIPIKFVNNYLCEVPKFIKVQASDGREWSIQTRYSHTGALYLSGGWPGFVVDMNLDRGDICIFELIKMDDVIMKVSVF 323
            S S    ++  EER+R + AA+ FEP NP F V++R +   + C +++P  F   YL  +  FIK+Q  + ++W ++  Y   G    S GW  F ++ N+  GD+C+FEL++  D +++V+ F
Sbjct:   99 SASARKRTVTAEERERAVNAAKTFEPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGE-KQWPVRCLY-KAGRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAF 220

[Close]

BLAST of hap2-g22591.t2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr4:685791-686668 FORWARD LENGTH=190)

HSP 1 Score: 87.8113 bits (216), Expect = 1.762e-20
Identity = 42/102 (41.18%), Postives = 64/102 (62.75%), Query Frame = 0

Query:   11 RFFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYP 112
            +FF+++LPS ++ K ++IP  FV   G  +LS   TL TP G    + + +   +IW  +GW  F   HSI   +FL+F+Y KNS+F V+IF+ +ACE +YP
Sbjct:   29 KFFKLVLPSTMKDKMMRIPPRFVKLQG-SKLSEVVTLVTPAGYKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYP 129

[Close]

BLAST of hap2-g22591.t2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:18312983-18313748 FORWARD LENGTH=190)

HSP 1 Score: 83.1889 bits (204), Expect = 1.112e-18
Identity = 45/122 (36.89%), Postives = 71/122 (58.20%), Query Frame = 0

Query:   11 RFFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQ 132
            +F ++IL S +  K +K+P  FV RFG  +L+ + TL+TP G    + + +   ++W + GW  F   HS+   +FL F Y  +S F V+IFD++A EI+YP      N+EE   + DD+ Q
Sbjct:   33 KFIKIILLSRIIEKMMKVPARFV-RFG-PKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKGWSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPLDDTDDNREE---VMDDDEQ 149

[Close]

BLAST of hap2-g22591.t2 vs. Araport11
Match: | (Symbols: REM7 | REPRODUCTIVE MERISTEM 7 | chr3:6542982-6543568 FORWARD LENGTH=172)

HSP 1 Score: 73.559 bits (179), Expect = 2.280e-15
Identity = 36/86 (41.86%), Postives = 52/86 (60.47%), Query Frame = 0

Query:   27 KIPKAFVGRFGYEELSSDATLKTPNGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVLIFDMTACEIDYP 112
            KIP  FV   G  +LS   TL+TP G    + + +   +IW  +GW  F   HSI   +FL+F+Y +NS+F V+IF+++ACE  YP
Sbjct:    8 KIPPRFVKLQG-SKLSEVVTLETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYP 92

The following BLAST results are available for this feature:

BLAST of hap2-g22591.t2 vs. ExPASy TrEMBL (2024)
BLAST of hap2-g22591.t2 vs. ExPASy Swiss-Prot (2024)
BLAST of hap2-g22591.t2 vs. Araport11

BLAST of hap2-g22591.t2 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs UniProt TrEMBL)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
tr\|V4RPM0\|V4RPM0_CITCL	0.000e+0	88.18	TF-B3 domain-containing protein OS=Citrus clementi...	[more]
tr\|A0A2H5PHP6\|A0A2H5PHP6_CITUN	0.000e+0	98.13	TF-B3 domain-containing protein OS=Citrus unshiu O...	[more]
tr\|A0A067EAH5\|A0A067EAH5_CITSI	2.636e-176	97.93	TF-B3 domain-containing protein (Fragment) OS=Citr...	[more]
tr\|A0A2H5PIC2\|A0A2H5PIC2_CITUN	4.750e-174	89.89	TF-B3 domain-containing protein OS=Citrus unshiu O...	[more]
tr\|A0A2H5PHN8\|A0A2H5PHN8_CITUN	6.417e-80	45.80	TF-B3 domain-containing protein OS=Citrus unshiu O...	[more]
tr\|A0A5C7I5P8\|A0A5C7I5P8_9ROSI	3.652e-75	43.50	TF-B3 domain-containing protein OS=Acer yangbiense...	[more]
tr\|A0AA39VJM1\|A0AA39VJM1_ACESA	6.209e-75	43.50	TF-B3 domain-containing protein OS=Acer saccharum ...	[more]
tr\|A0A5C7I6J6\|A0A5C7I6J6_9ROSI	1.399e-74	43.20	TF-B3 domain-containing protein OS=Acer yangbiense...	[more]
tr\|A0A067EMQ5\|A0A067EMQ5_CITSI	1.525e-74	44.86	TF-B3 domain-containing protein (Fragment) OS=Citr...	[more]
tr\|A0A5C7I772\|A0A5C7I772_9ROSI	2.835e-74	40.68	TF-B3 domain-containing protein OS=Acer yangbiense...	[more]

BLAST of hap2-g22591.t2 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs UniProt Swissprot)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
sp\|Q8L3W1\|VRN1_ARATH	7.537e-47	30.86	B3 domain-containing transcription factor VRN1 OS=...	[more]
sp\|Q10GM3\|Y3222_ORYSJ	3.395e-22	26.54	B3 domain-containing protein Os03g0622200 OS=Oryza...	[more]
sp\|Q84R27\|Y3896_ARATH	7.569e-20	41.18	B3 domain-containing protein At3g18960 OS=Arabidop...	[more]
sp\|Q9XIB5\|REM19_ARATH	9.937e-20	33.87	B3 domain-containing protein REM19 OS=Arabidopsis ...	[more]
sp\|Q9ZSH7\|Y4158_ARATH	1.704e-19	41.18	B3 domain-containing protein At4g01580 OS=Arabidop...	[more]
sp\|Q2R9D2\|Y1176_ORYSJ	3.189e-19	25.14	B3 domain-containing protein Os11g0197600 OS=Oryza...	[more]
sp\|Q9XIB4\|Y1475_ARATH	1.077e-17	36.89	B3 domain-containing protein At1g49475 OS=Arabidop...	[more]
sp\|Q851V5\|Y3216_ORYSJ	3.421e-16	24.63	Putative B3 domain-containing protein Os03g0621600...	[more]
sp\|Q2QMT6\|Y1208_ORYSJ	4.293e-16	25.00	B3 domain-containing protein LOC_Os12g40080 OS=Ory...	[more]
sp\|Q2QMT2\|Y1223_ORYSJ	1.181e-15	27.13	B3 domain-containing protein Os12g0592300 OS=Oryza...	[more]

BLAST of hap2-g22591.t2 vs. Araport11
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs Araport11)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
\|	7.805e-48	30.86	Symbols: REM39, VRN1 \| REPRODUCTIVE MERISTEM 39, R...	[more]
\|	1.981e-47	30.86	Symbols: REM39, VRN1 \| REPRODUCTIVE MERISTEM 39, R...	[more]
\|	6.289e-21	41.18	Symbols: REM7 \| REPRODUCTIVE MERISTEM 7 \| chr3:654...	[more]
\|	7.815e-21	41.18	Symbols: REM7 \| REPRODUCTIVE MERISTEM 7 \| chr3:654...	[more]
\|	1.025e-20	33.87	Symbols: RTV1 \| related to vernalization1 1 \| chr1...	[more]
\|	1.025e-20	33.87	Symbols: RTV1 \| related to vernalization1 1 \| chr1...	[more]
\|	1.025e-20	33.87	Symbols: RTV1 \| related to vernalization1 1 \| chr1...	[more]
\|	1.762e-20	41.18	Symbols: no symbol available \| no full name availa...	[more]
\|	1.112e-18	36.89	Symbols: no symbol available \| no full name availa...	[more]
\|	2.280e-15	41.86	Symbols: REM7 \| REPRODUCTIVE MERISTEM 7 \| chr3:654...	[more]

InterPro

Analysis Name: InterProScan Analysis for Citrus garrawayi UQ v1.0 proteins
Date Performed: 2024-10-02

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 238..325 e-value: 4.4E-11 score: 53.9 coord: 17..103 e-value: 7.5E-12 score: 56.4
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 11..105 score: 12.054611
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 230..326 score: 13.648081
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 10..103 e-value: 6.82051E-17 score: 73.1309
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 229..324 e-value: 9.46591E-15 score: 67.3529
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 209..327 e-value: 5.9E-26 score: 92.6
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 5..107 e-value: 5.7E-25 score: 89.2
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 9..107
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 224..325
IPR050655	Plant B3 domain-containing	PANTHER	PTHR31920	B3 DOMAIN-CONTAINING	coord: 9..312

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at hap2-C.garr_08:3738467..3740314+
coding sequence from alignment at hap2-C.garr_08:3738467..3740314+

mRNA sequence

>hap2-g22591.t2_Cgarrawayi-UQ_v1 ID=hap2-g22591.t2_Cgarrawayi-UQ_v1; Name=hap2-g22591.t2; organism=Citrus garrawayi; type=mRNA; length=993bp
ATGGCTGGCAACAGAGCAACGGAACCCTTTCGTTTCTTCAGAGTCATTCT
TCCGAGCATCCTTGAACTGAAGAAGCTGAAAATCCCGAAAGCGTTTGTCG
GGAGATTTGGGTATGAAGAACTTTCCTCTGATGCTACTCTCAAGACTCCG
AACGGATGTGTTTGGCAAGTTGGGGTGACAAAAGACAAGGGAAAGATTTG
GCTCGATGATGGATGGCATCATTTTGTCACAGATCATTCTATTTGTGTTG
CATATTTTTTGGTATTCAAATATGCCAAGAATTCAACCTTTGATGTTCTT
ATTTTTGATATGACTGCTTGTGAGATTGACTATCCTTATCATCGCGGACA
ACCAAACAAGGAGGAGCAGAATTCAATCCATGACGACGAAATGCAATGTG
AAAACTCAACTAAGAAACTAGGTTTCAGAGCTTCATGCAAAAATCAAATG
CACCATTCACAAGGATCTTTGCACCGCAAAAGGCTGTTGAATGGAACTGC
TGGGAATTTTAGTCGTCCAAGCTCAGCAGTTCAAGATGATCACCAAACAG
AATTTGTAGATGGACAAGCATTGTCGGCTTTGCTTGAAGAAATGGGGATC
TCTATCAGTCGATCATGTCTGTCTCTTGAAGTGGAAGAAAGACAGAGAGT
AATCACTGCAGCCAGATTGTTCGAGCCTAGAAATCCTTCATTCATGGTTA
TTGTGCGGGGAAATGAAAGACGTAAAGCCTGTCTGTTTATCCCAATCAAG
TTTGTTAACAATTATTTGTGTGAAGTTCCCAAATTTATCAAAGTACAGGC
TTCTGACGGAAGAGAGTGGTCCATACAAACCAGGTACAGTCATACTGGGG
CTCTTTATTTATCAGGTGGATGGCCTGGATTTGTTGTTGACATGAATTTG
GATAGAGGAGATATTTGCATCTTTGAGTTGATCAAGATGGATGATGTTAT
TATGAAAGTTTCAGTTTTTAGTGCATCTAAAGAGTGTAAGTGA

protein sequence of hap2-g22591.t2_Cgarrawayi-UQ_v1

>hap2-g22591.t2_Cgarrawayi-UQ_v1 ID=hap2-g22591.t2_Cgarrawayi-UQ_v1; Name=hap2-g22591.t2_Cgarrawayi-UQ_v1; organism=Citrus garrawayi; type=polypeptide; length=331bp
MAGNRATEPFRFFRVILPSILELKKLKIPKAFVGRFGYEELSSDATLKTP
NGCVWQVGVTKDKGKIWLDDGWHHFVTDHSICVAYFLVFKYAKNSTFDVL
IFDMTACEIDYPYHRGQPNKEEQNSIHDDEMQCENSTKKLGFRASCKNQM
HHSQGSLHRKRLLNGTAGNFSRPSSAVQDDHQTEFVDGQALSALLEEMGI
SISRSCLSLEVEERQRVITAARLFEPRNPSFMVIVRGNERRKACLFIPIK
FVNNYLCEVPKFIKVQASDGREWSIQTRYSHTGALYLSGGWPGFVVDMNL
DRGDICIFELIKMDDVIMKVSVFSASKECK*

mRNA from alignment at hap2-C.garr_08:3738467..3740314+

Legend: start_codonCDSexonpolypeptideintronstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

> ID=; Name=; organism= ; type=; length=1848bp; location=Sequence derived from: hap2-C.garr_08:3738467..3740314+ (Citrus garrawayi
ATGGCTGGCAACAGAGCAACGGAACCCTTTCGTTTCTTCAGAGTCATTCT
TCCGAGCATCCTTGAACTGAAGAAGCTGGTAATTTTCTCATCTTTTGCTT
ATTTATGTATTTGATTATATTATTGGTTAAAATGCTGCAAAATAAAATCT
GCGATCCATGCAGTTTGATGGCCATGTTTTTTATTTTTAGATCTTAGGTA
AAGTTCTCAGAATTTTCTTTAAAATACTTTAAGAAGTAATTTTTCTATTT
AAATGTTTCATTTGTGTAAAGAAAGAAAATTGCTTCTGCAGATAATGAAA
ATTTCTGACAATCTCTATGACTATGGCTTTCCACGCCGTTGCTTCCTTTA
CTTCATCTCATTATGCTAGTAATGTTTCCCATTGTCTGCTGTACCAAATA
ACATCTATATGTTCCTCTGAATTTCAATTAAATGAAAATCATTTTGCCAC
CAGGGGCCTGGCAGAATGGTTCTCAAGTAGATTTATAGGAAAGGTGCGGG
ATTAAAAAGTTGATTTGGGCTTTGCCTACCCTTTTACCTTTTTTCCAATT
ATAAAGAATGCTAAGTGTGATTTTAAGCTAAATAGGTCATTGTTGTGGTC
TTGTTTAAGCTGTTTTAAAATAAAATCGTTCTATACTGACCAAGAATTAT
ATTTGATTGCATGTCGTGGAAATATTTCTATACGTGGATCTTAAATTTTA
AATCTATTGCTGCAGAAAATCCCGAAAGCGTTTGTCGGGAGATTTGGGTA
TGAAGAACTTTCCTCTGATGCTACTCTCAAGACTCCGAACGGATGTGTTT
GGCAAGTTGGGGTGACAAAAGACAAGGGAAAGATTTGGCTCGATGATGGA
TGGCATCATTTTGTCACAGATCATTCTATTTGTGTTGCATATTTTTTGGT
ATTCAAATATGCCAAGAATTCAACCTTTGATGTTCTTATTTTTGATATGA
CTGCTTGTGAGATTGACTATCCTTATCATCGCGGACAACCAAACAAGGAG
GAGCAGAATTCAATCCATGACGACGAAATGCAATGTGAAAACTCAACTAA
GAAACTAGGTTTCAGAGCTTCATGCAAAAATCAAATGCACCATTCACAAG
GATCTTTGCACCGCAAAAGGCTGTTGAATGGAACTGCTGGGAATTTTAGT
CGTCCAAGCTCAGCAGTTCAAGATGATCACCAAACAGAATTTGTAGGTAA
TGATATTTGGCCCAAAAGAACCGTATATAAGGAAGGGATACATGTACTAT
CTCTATGCTTGTATATCCTTTCTTTGTAGCATAGGGTTCACAAATTTACC
TATTCATCACTGATTCAATAAATGGCAGATGGACAAGCATTGTCGGCTTT
GCTTGAAGAAATGGGGATCTCTATCAGTCGATCATGTCTGTCTCTTGAAG
TGGAAGAAAGACAGAGAGTAATCACTGCAGCCAGATTGTTCGAGCCTAGA
AATCCTTCATTCATGGTTATTGTGCGGGGAAATGAAAGACGTAAAGCCTG
TCTGGTAAGCATTCAAATACAACATGATTTTGAATTACTTTAATATCACC
TTTGCTAATAACTTGCAGCTTTTTTTTTTTCCTTGTACAGTTTATCCCAA
TCAAGTTTGTTAACAATTATTTGTGTGAAGTTCCCAAATTTATCAAAGTA
CAGGCTTCTGACGGAAGAGAGTGGTCCATACAAACCAGGTACAGTCATAC
TGGGGCTCTTTATTTATCAGGTGGATGGCCTGGATTTGTTGTTGACATGA
ATTTGGATAGAGGAGATATTTGCATCTTTGAGTTGATCAAGATGGATGAT
GTTATTATGAAAGTTTCAGTTTTTAGTGCATCTAAAGAGTGTAAGTGA

Coding sequence (CDS) from alignment at hap2-C.garr_08:3738467..3740314+

>hap2-g22591.t2_Cgarrawayi-UQ_v1 ID=hap2-g22591.t2_Cgarrawayi-UQ_v1; Name=hap2-g22591.t2; organism=Citrus garrawayi; type=CDS; length=993bp; location=Sequence derived from: hap2-C.garr_08:3738467..3740314+ (Citrus garrawayi
ATGGCTGGCAACAGAGCAACGGAACCCTTTCGTTTCTTCAGAGTCATTCT
TCCGAGCATCCTTGAACTGAAGAAGCTGAAAATCCCGAAAGCGTTTGTCG
GGAGATTTGGGTATGAAGAACTTTCCTCTGATGCTACTCTCAAGACTCCG
AACGGATGTGTTTGGCAAGTTGGGGTGACAAAAGACAAGGGAAAGATTTG
GCTCGATGATGGATGGCATCATTTTGTCACAGATCATTCTATTTGTGTTG
CATATTTTTTGGTATTCAAATATGCCAAGAATTCAACCTTTGATGTTCTT
ATTTTTGATATGACTGCTTGTGAGATTGACTATCCTTATCATCGCGGACA
ACCAAACAAGGAGGAGCAGAATTCAATCCATGACGACGAAATGCAATGTG
AAAACTCAACTAAGAAACTAGGTTTCAGAGCTTCATGCAAAAATCAAATG
CACCATTCACAAGGATCTTTGCACCGCAAAAGGCTGTTGAATGGAACTGC
TGGGAATTTTAGTCGTCCAAGCTCAGCAGTTCAAGATGATCACCAAACAG
AATTTGTAGATGGACAAGCATTGTCGGCTTTGCTTGAAGAAATGGGGATC
TCTATCAGTCGATCATGTCTGTCTCTTGAAGTGGAAGAAAGACAGAGAGT
AATCACTGCAGCCAGATTGTTCGAGCCTAGAAATCCTTCATTCATGGTTA
TTGTGCGGGGAAATGAAAGACGTAAAGCCTGTCTGTTTATCCCAATCAAG
TTTGTTAACAATTATTTGTGTGAAGTTCCCAAATTTATCAAAGTACAGGC
TTCTGACGGAAGAGAGTGGTCCATACAAACCAGGTACAGTCATACTGGGG
CTCTTTATTTATCAGGTGGATGGCCTGGATTTGTTGTTGACATGAATTTG
GATAGAGGAGATATTTGCATCTTTGAGTTGATCAAGATGGATGATGTTAT
TATGAAAGTTTCAGTTTTTAGTGCATCTAAAGAGTGTAAGTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR003340	B3_DNA-bd
IPR015300	DNA-bd_pseudobarrel_sf
IPR050655	Plant_B3_domain

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding