hap2-g2526.t2
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following start_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following stop_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of hap2-g2526.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A067GIG1|A0A067GIG1_CITSI (RRM domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g010771mg PE=4 SV=1) HSP 1 Score: 981.86 bits (2537), Expect = 0.000e+0 Identity = 496/501 (99.00%), Postives = 499/501 (99.60%), Query Frame = 0 Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRNGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRDRDRDRTRDRDRGRDRGRDHERDREKDRDRERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPADQEDDRGWYDRHENYEHHRGYGDHDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKERTRDLDREY 501
MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSR+GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGR+RDRDRTRDRDRGRDRGRDHERDREKDRD+ERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDP DQEDDRGWYD HENYEHHRGYGDHDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKERTRDLDREY
Sbjct: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDDRGWYDHHENYEHHRGYGDHDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKERTRDLDREY 501
BLAST of hap2-g2526.t2 vs. ExPASy TrEMBL (2024)
Match: tr|V4SPA8|V4SPA8_CITCL (RRM domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10025502mg PE=4 SV=1) HSP 1 Score: 922.924 bits (2384), Expect = 0.000e+0 Identity = 476/501 (95.01%), Postives = 478/501 (95.41%), Query Frame = 0 Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRNGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRDRDRDRTRDRDRGRDRGRDHERDREKDRDRERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPADQEDDRGWYDRHENYEHHRGYGDHDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKERTRDLDREY 501
MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKR VRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGR+RDRDRTRDRDRGRDRGRDHERDREKDRD+ERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDP DQEDDRGWYD HENYEHHRGYGDHDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKERTRDLDREY
Sbjct: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKR---------------------VRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDDRGWYDHHENYEHHRGYGDHDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKERTRDLDREY 480
BLAST of hap2-g2526.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A067GIN6|A0A067GIN6_CITSI (RRM domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g010771mg PE=4 SV=1) HSP 1 Score: 922.924 bits (2384), Expect = 0.000e+0 Identity = 476/501 (95.01%), Postives = 478/501 (95.41%), Query Frame = 0 Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRNGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRDRDRDRTRDRDRGRDRGRDHERDREKDRDRERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPADQEDDRGWYDRHENYEHHRGYGDHDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKERTRDLDREY 501
MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKR VRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGR+RDRDRTRDRDRGRDRGRDHERDREKDRD+ERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDP DQEDDRGWYD HENYEHHRGYGDHDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKERTRDLDREY
Sbjct: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKR---------------------VRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDDRGWYDHHENYEHHRGYGDHDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKERTRDLDREY 480
BLAST of hap2-g2526.t2 vs. ExPASy TrEMBL (2024)
Match: tr|V4SJA7|V4SJA7_CITCL (RRM domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10025502mg PE=4 SV=1) HSP 1 Score: 915.605 bits (2365), Expect = 0.000e+0 Identity = 474/501 (94.61%), Postives = 476/501 (95.01%), Query Frame = 0 Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRNGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRDRDRDRTRDRDRGRDRGRDHERDREKDRDRERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPADQEDDRGWYDRHENYEHHRGYGDHDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKERTRDLDREY 501
MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKR VRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDR ERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGR+RDRDRTRDRDRGRDRGRDHERDREKDRD+ERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDP DQEDDRGWYD HENYEHHRGYGDHDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKERTRDLDREY
Sbjct: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKR---------------------VRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDR--ERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDDRGWYDHHENYEHHRGYGDHDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKERTRDLDREY 478
BLAST of hap2-g2526.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A067GLG1|A0A067GLG1_CITSI (RRM domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g010771mg PE=4 SV=1) HSP 1 Score: 902.894 bits (2332), Expect = 0.000e+0 Identity = 469/501 (93.61%), Postives = 471/501 (94.01%), Query Frame = 0 Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRNGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRDRDRDRTRDRDRGRDRGRDHERDREKDRDRERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPADQEDDRGWYDRHENYEHHRGYGDHDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKERTRDLDREY 501
MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVE RRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKR VRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGR+RDRDRTRDRDRGRDRGRDHERDREKDRD+ERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDP DQEDDRGWYD HENYEHHRGYGDHDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKERTRDLDREY
Sbjct: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVE-------RRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKR---------------------VRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDDRGWYDHHENYEHHRGYGDHDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKERTRDLDREY 473
BLAST of hap2-g2526.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2H5NRD7|A0A2H5NRD7_CITUN (RRM domain-containing protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_069100 PE=4 SV=1) HSP 1 Score: 609.372 bits (1570), Expect = 0.000e+0 Identity = 292/293 (99.66%), Postives = 293/293 (100.00%), Query Frame = 0 Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRNGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDR 293
MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSR+GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDR
Sbjct: 99 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDR 391
BLAST of hap2-g2526.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A8K0DVV1|A0A8K0DVV1_9ROSA (RRM domain-containing protein OS=Rhamnella rubrinervis OX=2594499 GN=FNV43_RR21815 PE=4 SV=1) HSP 1 Score: 597.045 bits (1538), Expect = 0.000e+0 Identity = 338/539 (62.71%), Postives = 389/539 (72.17%), Query Frame = 0 Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRNGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERS----------RERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRDRDRDRTRDRDRGRDRGRDHERDREK-----DRDRERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHG--ERDYDPADQEDDRGWYDR----------------HENYEHHRGYGDH-----DRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKERTRDLDREY 501
MGDY+DAFMRNQN+AVQARTKAQNRANVLQLKLIGQSHPTGLT+NLLKLFEPR PLE+KPPPEKRKCPPLTG+AQFVS FA+ DP YA PV+K ETP ERRARIH+LRLEKGA KAAEEL+KYDP +DPN+SGDPYKTLFVARL+YETTES+IKREF+ YGP+KR VRLV D++TNKPRGYAFIEYMHTRDMKAAYKQADGRK++GRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQ S G RS EPR+RED+HGDRDRE+S +E+ RDRER R SH++ RDRDHR+D+H RDRD+ D+ +R+R+RDRD R RER+RDY+VGD D D G+SR R+SDY ERDRHG E+DYD A EDD+GWY++ +E+YEHHR DH RY QY D NDRYDQ+ +DDY+Y+RA SESR+++RTRD+DREY
Sbjct: 1 MGDYSDAFMRNQNSAVQARTKAQNRANVLQLKLIGQSHPTGLTSNLLKLFEPRPPLEFKPPPEKRKCPPLTGIAQFVSKFADREDPEYALPVQKGETPTERRARIHQLRLEKGAAKAAEELEKYDPSSDPNISGDPYKTLFVARLNYETTESRIKREFDVYGPVKR---------------------VRLVNDRDTNKPRGYAFIEYMHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQSQSGGQRRSEEPRVREDQHGDRDREKSRERGKEREREQEKSRDRERSR------SHEKSRDRDHREDKHQRDRDQREDKHLRDRDRNRDRDREKERERDRERDRPRDRDRGRDRGRDYERERDRDRDWERPRERERDYDVGDLDNDHGHSRARESDY-------ERDRHGDREQDYDHAAPEDDQGWYEQPEHGHRHTDLDHDPEHYEHYEHHRRQHDHLEVADVRYEQYPDHGNDRYDQI-DDDYQYERAPSESRERDRTRDVDREY 504
BLAST of hap2-g2526.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A1Q3CS22|A0A1Q3CS22_CEPFO (RRM_1 domain-containing protein/U1snRNP70_N domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_26382 PE=4 SV=1) HSP 1 Score: 590.882 bits (1522), Expect = 0.000e+0 Identity = 351/509 (68.96%), Postives = 391/509 (76.82%), Query Frame = 0 Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRNGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDRERERE--KSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRDRDRDRTRDRDRGRDRGRDHERDREKDRDRERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPADQEDDRGW-------------YDRH-ENYEHHRGYGDHDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKER 493
MGDYNDAFMRNQNAA+QARTK QNRANV QLKL+G SHPTGLT LLKLFEPR PLEYKPPPEKRKCPPLTGM QFVS FAEPGDP YAPP++ AETP ERR RIHKLRLEKGAEKAAEEL+ YDP NDPNVSGDPYKTLFVARL+YETTES+IKREFESYGPIKR VRLVTDK +NKPRGYAFIEY+HTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQR SGREQ S PSRS EPR REDRH DRDRE+SRER + + E SH+R RDRDH++ HHRDRDR RD++++R+RGRDR R R R RD RDR +DH R+R DRD TR+RE+++D DPD +RG SRD++SDYDR+DSKHERDR+ ER YD + EDD W +D+H E+YE H D RY++Y D D DRYDQMEEDDY Y RA SESR+++R
Sbjct: 1 MGDYNDAFMRNQNAALQARTKTQNRANVQQLKLMGASHPTGLTPQLLKLFEPRPPLEYKPPPEKRKCPPLTGMGQFVSKFAEPGDPEYAPPIQTAETPTERRVRIHKLRLEKGAEKAAEELQNYDPTNDPNVSGDPYKTLFVARLNYETTESRIKREFESYGPIKR---------------------VRLVTDKVSNKPRGYAFIEYVHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRNSGREQVQSAAPSRSEEPRTREDRHVDRDREKSRERRDKEREREKSREPRERSHERLRDRDHKE--HHRDRDRERDKDKDRERGRDRARGRDRGRDHERDRDKDHGRER--------DRDHTRDREKEKD---DDPDHERGRSRDKESDYDRVDSKHERDRYTERVYDHTEPEDDNAWPGHGHRHRRSDLDHDQHYEHYERHMDVHDDGRYDKYPDHDLDRYDQMEEDDYYYGRAKSESRERDR 475
BLAST of hap2-g2526.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5C7HRL3|A0A5C7HRL3_9ROSI (RRM domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_014193 PE=4 SV=1) HSP 1 Score: 583.948 bits (1504), Expect = 0.000e+0 Identity = 293/367 (79.84%), Postives = 309/367 (84.20%), Query Frame = 0 Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKR-----------------------------------------------LICNSCNGGDSSRNGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRP 320
MGD+ND FMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPR PLEYKPPPEKRKCPPL GMAQFVSHFAEPGDP YAPPV++AETPV+RRARIHKLRLEKGAEKAAEEL KYDP+NDP+++GDPYKTLFVARLSYETTES+IKREFESYGPIKR LICNS NGGD+SR+GKP DEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQ++SGREQE SRGPSRS EPRIREDRHGDRDRERSRE GRD+E+EREKS ELSHD+P
Sbjct: 1 MGDFNDPFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKRKCPPLIGMAQFVSHFAEPGDPEYAPPVQEAETPVQRRARIHKLRLEKGAEKAAEELLKYDPNNDPSIAGDPYKTLFVARLSYETTESRIKREFESYGPIKRVGIFEYPQAGLVRGLCAALSFPFSFKTILLDLETIMGQGIPSVSVIELICNSSNGGDASRDGKPYDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQKHSGREQEQSRGPSRSEEPRIREDRHGDRDRERSRETGRDKEKEREKSHELSHDKP 367
BLAST of hap2-g2526.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A835DM25|A0A835DM25_9MAGN (RRM domain-containing protein OS=Tetracentron sinense OX=13715 GN=HHK36_010112 PE=4 SV=1) HSP 1 Score: 583.563 bits (1503), Expect = 0.000e+0 Identity = 362/565 (64.07%), Postives = 415/565 (73.45%), Query Frame = 0 Query: 1 MGDYN-DAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRL--------------------------ICNSCNGGD--SSRNGKPC-------------DEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRDRDRDRTRDRDRGRDRGRDHERDREKDRDRERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHG--ERDYDPADQEDDRGWYDR-----------HENYEHHRG---------YGDHDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKERTRDLDREY 501
MGD+N DAFMRN++AAVQARTKAQNRA VLQLKLIGQSHPTGLT+NLLKLFEPR PLEYKP PEKRKCP +GMAQFVS+FAEPGDP YAPPV+K ET V+RRARIHKLRLEKGAEKAAEEL+KYD +NDPNV+GDPYKTLFVARL+YETTE +IKREFE+YGPIKR+ +C G + N K D VR++TDKE NKPRGYAF+EYMHTRDMKAAYKQADGRKLD RRVLVDVERGRTVPNWRPRRLGGGLG+TRVGGEEVNQ+YSGRE S G RS EPR RE+RH DR+RE+SRERGRDRE+E+EKSLE HDR RDRD R++RHHRDRDR RDR+RERDRGRDRDR R R R E+DR+R+RDR R RER+RDYE GDPD D G SRDR++DYDR++ KHERDRHG ER+ D + E D WY++ H +Y+H++G GD DR++ D DNDRY+ ME DDY+Y+ TSESR++ERTRD EY
Sbjct: 1 MGDFNNDAFMRNRDAAVQARTKAQNRATVLQLKLIGQSHPTGLTSNLLKLFEPRPPLEYKPTPEKRKCPSYSGMAQFVSNFAEPGDPEYAPPVQKGETAVQRRARIHKLRLEKGAEKAAEELEKYDSNNDPNVTGDPYKTLFVARLNYETTEHRIKREFEAYGPIKRVGITDHPHVGPRLLPLDFGKRVNCVAVLCFVSFGSSEHTVSNFKLLKIYCYQNSLSGSEDILVRMITDKEANKPRGYAFVEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRRLGGGLGSTRVGGEEVNQKYSGREPHQSGGRPRSEEPRAREERHIDREREKSRERGRDREKEQEKSLERPHDRTRDRDPREERHHRDRDRNRDRDRERDRGRDRDRTRDR------------GRGYERDRERDRDRGHDRPRERERDYERGDPDHDHGRSRDREADYDRVEPKHERDRHGEREREIDRVEPEHDDDWYEQPGNGRPEPDHEHGHYDHYQGKGQYGHLEPQGDQDRFDDGPDLDNDRYNHMELDDYQYEHGTSESRERERTRDRGHEY 553
BLAST of hap2-g2526.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q42404|RU17_ARATH (U1 small nuclear ribonucleoprotein 70 kDa OS=Arabidopsis thaliana OX=3702 GN=RNU1 PE=1 SV=1) HSP 1 Score: 460.685 bits (1184), Expect = 9.009e-159 Identity = 281/509 (55.21%), Postives = 325/509 (63.85%), Query Frame = 0 Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRNGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRV-GGEEVNQRYSGREQEPSRGPSRSAEP-RIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDH---RDDRHHRDRDRTRDRERERDRGRDRDRDRTRDRDRGRDRGRDHERDREKDRDRERDRDR------------TRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPADQEDDRGWYDRHENYEHHRGYGDHDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKE 492
MGD D F+RN NAAVQAR K QNRANVLQLKL+GQSHPTGLT NLLKLFEPR PLEYKPPPEKRKCPP TGMAQFVS+FAEPGDP YAPP + E P ++R RIHKLRLEKG EKAAE+LKKYDP+NDPN +GDPYKTLFV+RL+YE++ESKIKREFESYGPIKR V LVTD+ TNKP+GYAFIEYMHTRDMKAAYKQADG+K+DGRRVLVDVERGRTVPNWRPRRLGGGLGT+RV GGEE+ EQ+P S+S EP R RE +RE+SRE+G++RER R ELSH++PR+R R+D+HHRDRD+ R DRDR R+ DRDR R ++R R RERD +Y G+P+ RGY EDD+ GD DRY+ RYD+MEEDD+RY+R S+ E
Sbjct: 1 MGDSGDPFLRNPNAAVQARAKVQNRANVLQLKLMGQSHPTGLTNNLLKLFEPRPPLEYKPPPEKRKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVELPSQKRERIHKLRLEKGVEKAAEDLKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKR---------------------VHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQADGQKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGGEEIVG-----EQQPQGRTSQSEEPSRPRE------EREKSREKGKERERSR----ELSHEQPRERSRDRPREDKHHRDRDQGGRDRDRDSRRDRDRTRDRGDRDRRDRDRGRDRTSRDHDRDRSRKKERDYEGGEYEHEGGGRSRERDAEYR-GEPEETRGYY-----------------------------EDDQ---------------GDTDRYSH-------RYDKMEEDDFRYEREYKRSKRSE 421
BLAST of hap2-g2526.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|P08621|RU17_HUMAN (U1 small nuclear ribonucleoprotein 70 kDa OS=Homo sapiens OX=9606 GN=SNRNP70 PE=1 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 2.790e-48 Identity = 124/234 (52.99%), Postives = 152/234 (64.96%), Query Frame = 0 Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRNGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AET ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++REFE YGPIKR + +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
BLAST of hap2-g2526.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q62376|RU17_MOUSE (U1 small nuclear ribonucleoprotein 70 kDa OS=Mus musculus OX=10090 GN=Snrnp70 PE=1 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 3.973e-48 Identity = 124/233 (53.22%), Postives = 151/233 (64.81%), Query Frame = 0 Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRNGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 269
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AET ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++REFE YGPIKR + +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 213
BLAST of hap2-g2526.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q1RMR2|RU17_BOVIN (U1 small nuclear ribonucleoprotein 70 kDa OS=Bos taurus OX=9913 GN=SNRNP70 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 5.799e-48 Identity = 124/234 (52.99%), Postives = 152/234 (64.96%), Query Frame = 0 Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRNGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AET ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++REFE YGPIKR + +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
BLAST of hap2-g2526.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q66II8|RU17_XENTR (U1 small nuclear ribonucleoprotein 70 kDa OS=Xenopus tropicalis OX=8364 GN=snrnp70 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 3.749e-47 Identity = 123/233 (52.79%), Postives = 150/233 (64.38%), Query Frame = 0 Query: 42 LTANLLKLFEPRAPLEYKPPP-----EKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRNGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 269
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AET ER R + ++E+ + ELK +DPHND N GD +KTLFVAR++Y+TTESK++REFE YGPIKR + +V +K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 5 LPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAETREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKR---------------------IHMVYNKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 213
BLAST of hap2-g2526.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|P09406|RU17_XENLA (U1 small nuclear ribonucleoprotein 70 kDa OS=Xenopus laevis OX=8355 GN=snrnp70 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 7.828e-47 Identity = 123/233 (52.79%), Postives = 148/233 (63.52%), Query Frame = 0 Query: 42 LTANLLKLFEPRAPLEYKPPP-----EKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRNGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 269
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AET ER R + ++E+ + ELK +DPHND N GD +KTLFVAR++Y+TTESK++REFE YGPIKR+ G + S KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 5 LPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAETREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHIVYNKGSEGS------------------GKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 216
BLAST of hap2-g2526.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q55FQ0|RU17_DICDI (U1 small nuclear ribonucleoprotein 70 kDa OS=Dictyostelium discoideum OX=44689 GN=snrnp70 PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.662e-44 Identity = 92/209 (44.02%), Postives = 131/209 (62.68%), Query Frame = 0 Query: 71 TGMAQFVSHFAEPGDPLYAPPVEK--AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRNGKPCDEKVRLVTDKETNKP---RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPS 274
TG+ ++S F +P + P +K E E+R + KL++ + E+ ++ LK +DP+++ +GDPYKT+FV+R+SY+TT+ K++ EF +GPIK L LV K++N P GYAFIE+ RDMKAAYKQADG K+D RR++VD+ERGR + NW+PR+ GGGLG TR GG +VNQ +SGRE S
Sbjct: 33 TGLRDYLSIFTDPSN---EEPFKKEHIENLEEKREKKRKLKISENDERISKSLKAWDPYSNSETTGDPYKTIFVSRISYKTTQQKLEFEFGQFGPIKSLF---------------------LV--KDSNNPEKHTGYAFIEFERERDMKAAYKQADGMKIDDRRIVVDIERGRVIKNWKPRKFGGGLGNTRAGGVDVNQTFSGREMSES 215
BLAST of hap2-g2526.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|P17133|RU17_DROME (U1 small nuclear ribonucleoprotein 70 kDa OS=Drosophila melanogaster OX=7227 GN=snRNP-U1-70K PE=1 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 5.393e-40 Identity = 106/231 (45.89%), Postives = 144/231 (62.34%), Query Frame = 0 Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRNGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
L NLL LF R P+ + PP P ++K G+A+F++ F +P D P + ET ER R + + E+ A K E+ +DP N + DP++TLF+AR++Y+T+ESK++REFE YGPIK+++ L+ D+E+ KP+GYAFIEY H RDM AAYK ADG+K+D +RVLVDVER RTV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 5 LPPNLLALFAAREPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDPKD---TPLPKTVETRQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRREFEFYGPIKKIV---------------------LIHDQESGKPKGYAFIEYEHERDMHAAYKHADGKKIDSKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
BLAST of hap2-g2526.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|O13829|RU17_SCHPO (U1 small nuclear ribonucleoprotein 70 kDa homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=usp101 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.881e-36 Identity = 89/211 (42.18%), Postives = 125/211 (59.24%), Query Frame = 0 Query: 42 LTANLLKLFEPRAPLEYK----PPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRNGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
L A LL LF PR PL Y PPEKR P ++G+A+++ +A+ D Y P E+ E+R R+ + ++ E+ +K +DP +D +V GDPYKT+F++RLSY+T ES I+REF YGPI E++R+V +K T K GYAF+ + RD+K AYK + G L+GRR++VDVERGRTV W PR+L
Sbjct: 5 LPAPLLALFAPRPPLRYLPPMDVPPEKRSTPRVSGIAKYLK-YAQSHDQQYHP----TESLEEKRLRLRDEKQKQQRERLRSMIKVWDPDHDRHVIGDPYKTMFLSRLSYDTKESDIEREFTRYGPI---------------------ERIRVVRNKVTGKSMGYAFVVFERERDLKVAYKASAGLMLNGRRIVVDVERGRTVKGWLPRKL 189
BLAST of hap2-g2526.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q4KMD3|U1SBP_DANRE (U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Danio rerio OX=7955 GN=snrnp35 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 3.132e-18 Identity = 65/157 (41.40%), Postives = 86/157 (54.78%), Query Frame = 0 Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRNGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGP 277
L +Y P+ V GDP TLFVARL+ +TTE K++ F +G I+RL RLV D T + YAFIEY R +K A++ A+ LD +LVDVE+ RT+P WRPRRLGGG G + G+ R+ GR++ P R P
Sbjct: 35 LARYKPNR--GVCGDPDLTLFVARLNPQTTEEKLRDVFSKFGDIRRL---------------------RLVRDVVTGFSKRYAFIEYKEERSLKRAWRDANKLILDQYELLVDVEQERTLPGWRPRRLGGGQGGQKESGQ---LRFGGRDR-PFRKP 164
BLAST of hap2-g2526.t2 vs. Araport11
Match: | (Symbols: U1SNRNP, U1-70K | U1 small nuclear ribonucleoprotein-70K | chr3:18826476-18829492 REVERSE LENGTH=427) HSP 1 Score: 460.685 bits (1184), Expect = 9.425e-160 Identity = 281/509 (55.21%), Postives = 325/509 (63.85%), Query Frame = 0 Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRNGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRV-GGEEVNQRYSGREQEPSRGPSRSAEP-RIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDH---RDDRHHRDRDRTRDRERERDRGRDRDRDRTRDRDRGRDRGRDHERDREKDRDRERDRDR------------TRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPADQEDDRGWYDRHENYEHHRGYGDHDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKE 492
MGD D F+RN NAAVQAR K QNRANVLQLKL+GQSHPTGLT NLLKLFEPR PLEYKPPPEKRKCPP TGMAQFVS+FAEPGDP YAPP + E P ++R RIHKLRLEKG EKAAE+LKKYDP+NDPN +GDPYKTLFV+RL+YE++ESKIKREFESYGPIKR V LVTD+ TNKP+GYAFIEYMHTRDMKAAYKQADG+K+DGRRVLVDVERGRTVPNWRPRRLGGGLGT+RV GGEE+ EQ+P S+S EP R RE +RE+SRE+G++RER R ELSH++PR+R R+D+HHRDRD+ R DRDR R+ DRDR R ++R R RERD +Y G+P+ RGY EDD+ GD DRY+ RYD+MEEDD+RY+R S+ E
Sbjct: 1 MGDSGDPFLRNPNAAVQARAKVQNRANVLQLKLMGQSHPTGLTNNLLKLFEPRPPLEYKPPPEKRKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVELPSQKRERIHKLRLEKGVEKAAEDLKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKR---------------------VHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQADGQKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTSRVGGGEEIVG-----EQQPQGRTSQSEEPSRPRE------EREKSREKGKERERSR----ELSHEQPRERSRDRPREDKHHRDRDQGGRDRDRDSRRDRDRTRDRGDRDRRDRDRGRDRTSRDHDRDRSRKKERDYEGGEYEHEGGGRSRERDAEYR-GEPEETRGYY-----------------------------EDDQ---------------GDTDRYSH-------RYDKMEEDDFRYEREYKRSKRSE 421
BLAST of hap2-g2526.t2 vs. Araport11
Match: | (Symbols: U1SNRNP, U1-70K | U1 small nuclear ribonucleoprotein-70K | chr3:18828232-18829492 REVERSE LENGTH=204) HSP 1 Score: 286.574 bits (732), Expect = 8.333e-95 Identity = 135/167 (80.84%), Postives = 149/167 (89.22%), Query Frame = 0 Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRL 167
MGD D F+RN NAAVQAR K QNRANVLQLKL+GQSHPTGLT NLLKLFEPR PLEYKPPPEKRKCPP TGMAQFVS+FAEPGDP YAPP + E P ++R RIHKLRLEKG EKAAE+LKKYDP+NDPN +GDPYKTLFV+RL+YE++ESKIKREFESYGPIKR+
Sbjct: 1 MGDSGDPFLRNPNAAVQARAKVQNRANVLQLKLMGQSHPTGLTNNLLKLFEPRPPLEYKPPPEKRKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVELPSQKRERIHKLRLEKGVEKAAEDLKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRV 167
BLAST of hap2-g2526.t2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:18013431-18015376 FORWARD LENGTH=333) HSP 1 Score: 85.1149 bits (209), Expect = 7.258e-18 Identity = 62/156 (39.74%), Postives = 79/156 (50.64%), Query Frame = 0 Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRNGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSR 279
YDP D GDPY TLFV RLS+ TTE ++ YG IK L RLV T RGY F+EY ++M AY+ A +DGR ++VD R + +P W PRRLGGGLG + G+ R+ GR++ P R P R
Sbjct: 50 YDPSGDSKAVGDPYCTLFVGRLSHHTTEDTLREVMSKYGRIKNL---------------------RLVRHIVTGASRGYGFVEYETEKEMLRAYEDAHHSLIDGREIIVDYNRQQLMPGWIPRRLGGGLGGRKESGQ---LRFGGRDR-PFRAPLR 180
BLAST of hap2-g2526.t2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:18013431-18015065 FORWARD LENGTH=203) HSP 1 Score: 80.4925 bits (197), Expect = 3.641e-17 Identity = 49/125 (39.20%), Postives = 61/125 (48.80%), Query Frame = 0 Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRNGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
YDP D GDPY TLFV RLS+ TTE ++ YG IK L RLV T RGY F+EY ++M AY+ A +DGR ++VD R + +P W PRRL
Sbjct: 50 YDPSGDSKAVGDPYCTLFVGRLSHHTTEDTLREVMSKYGRIKNL---------------------RLVRHIVTGASRGYGFVEYETEKEMLRAYEDAHHSLIDGREIIVDYNRQQLMPGWIPRRL 153
BLAST of hap2-g2526.t2 vs. Araport11
Match: | (Symbols: DOT2, MDF | MERISTEM-DEFECTIVE, DEFECTIVELY ORGANIZED TRIBUTARIES 2 | chr5:5517784-5521566 REVERSE LENGTH=820) HSP 1 Score: 54.299 bits (129), Expect = 2.294e-7 Identity = 38/82 (46.34%), Postives = 57/82 (69.51%), Query Frame = 0 Query: 332 RDRDRTRDRERERDRGRDRDRDRTRDRDRGRD--RGRDHERDREKDRDRERDRDRTRERERDRDYEVGDPDRDRGYSRDRDS 411
RD+D RD+E+ERDR R RD D ++ RGRD R +D RDR K++D+E++R+R ++RE +RD E + D+DR ++R S
Sbjct: 52 RDKDHRRDKEKERDRKRSRDEDTEKEISRGRDKEREKDKSRDRVKEKDKEKERNRHKDRENERDNE-KEKDKDRARVKERAS 132
BLAST of hap2-g2526.t2 vs. Araport11
Match: | (Symbols: DOT2, MDF | MERISTEM-DEFECTIVE, DEFECTIVELY ORGANIZED TRIBUTARIES 2 | chr5:5517784-5521566 REVERSE LENGTH=820) HSP 1 Score: 54.299 bits (129), Expect = 2.294e-7 Identity = 38/82 (46.34%), Postives = 57/82 (69.51%), Query Frame = 0 Query: 332 RDRDRTRDRERERDRGRDRDRDRTRDRDRGRD--RGRDHERDREKDRDRERDRDRTRERERDRDYEVGDPDRDRGYSRDRDS 411
RD+D RD+E+ERDR R RD D ++ RGRD R +D RDR K++D+E++R+R ++RE +RD E + D+DR ++R S
Sbjct: 52 RDKDHRRDKEKERDRKRSRDEDTEKEISRGRDKEREKDKSRDRVKEKDKEKERNRHKDRENERDNE-KEKDKDRARVKERAS 132
BLAST of hap2-g2526.t2 vs. Araport11
Match: | (Symbols: DOT2, MDF | MERISTEM-DEFECTIVE, DEFECTIVELY ORGANIZED TRIBUTARIES 2 | chr5:5517784-5521566 REVERSE LENGTH=820) HSP 1 Score: 54.299 bits (129), Expect = 2.294e-7 Identity = 38/82 (46.34%), Postives = 57/82 (69.51%), Query Frame = 0 Query: 332 RDRDRTRDRERERDRGRDRDRDRTRDRDRGRD--RGRDHERDREKDRDRERDRDRTRERERDRDYEVGDPDRDRGYSRDRDS 411
RD+D RD+E+ERDR R RD D ++ RGRD R +D RDR K++D+E++R+R ++RE +RD E + D+DR ++R S
Sbjct: 52 RDKDHRRDKEKERDRKRSRDEDTEKEISRGRDKEREKDKSRDRVKEKDKEKERNRHKDRENERDNE-KEKDKDRARVKERAS 132
BLAST of hap2-g2526.t2 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:16912511-16913250 REVERSE LENGTH=102) HSP 1 Score: 48.9062 bits (115), Expect = 4.345e-7 Identity = 31/97 (31.96%), Postives = 49/97 (50.52%), Query Frame = 0 Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRNGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER 236
LFV+RLS TT+ +++ F +G IK + RL+ D ET +P+G+ FI + D + A K DG+ +DGR + V+V +
Sbjct: 9 LFVSRLSAYTTDQSLRQLFSPFGQIK---------------------EARLIRDSETQRPKGFGFITFDSEDDARKALKSLDGKIVDGRLIFVEVAK 84 The following BLAST results are available for this feature:
BLAST of hap2-g2526.t2 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of hap2-g2526.t2 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of hap2-g2526.t2 vs. Araport11
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs Araport11) Total hits: 8 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus garrawayi UQ v1.0 proteins
Date Performed: 2024-10-02 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >hap2-g2526.t2_Cgarrawayi-UQ_v1 ID=hap2-g2526.t2_Cgarrawayi-UQ_v1; Name=hap2-g2526.t2; organism=Citrus garrawayi; type=mRNA; length=1506bpback to top protein sequence of hap2-g2526.t2_Cgarrawayi-UQ_v1 >hap2-g2526.t2_Cgarrawayi-UQ_v1 ID=hap2-g2526.t2_Cgarrawayi-UQ_v1; Name=hap2-g2526.t2_Cgarrawayi-UQ_v1; organism=Citrus garrawayi; type=polypeptide; length=502bpback to top mRNA from alignment at hap2-C.garr_01:26958798..26963307+ Legend: start_codonCDSexonpolypeptideintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=4510bp; location=Sequence derived from: hap2-C.garr_01:26958798..26963307+ (Citrus garrawayiback to top Coding sequence (CDS) from alignment at hap2-C.garr_01:26958798..26963307+ >hap2-g2526.t2_Cgarrawayi-UQ_v1 ID=hap2-g2526.t2_Cgarrawayi-UQ_v1; Name=hap2-g2526.t2; organism=Citrus garrawayi; type=CDS; length=1506bp; location=Sequence derived from: hap2-C.garr_01:26958798..26963307+ (Citrus garrawayiback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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