hap2-g6272.t2
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following intron feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of hap2-g6272.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A067HBM2|A0A067HBM2_CITSI (Homeobox domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g026809mg PE=4 SV=1) HSP 1 Score: 445.662 bits (1145), Expect = 1.577e-156 Identity = 213/222 (95.95%), Postives = 215/222 (96.85%), Query Frame = 0 Query: 1 MEWPNFQQGGEMERQFQQDGGDTSNGLCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNLESIQSLEDSAPPPRDEDIYPQSPDLGNKIFCFNVPLSTNISLFS 222 MEWPNFQQGGEMERQFQQDGGDTSNGLCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQN ESIQSLEDSAPPPRDEDIYPQSPDLGNK FCFNV L+ +FS Sbjct: 3 MEWPNFQQGGEMERQFQQDGGDTSNGLCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDEDIYPQSPDLGNKFFCFNVLLNKYKLIFS 224
BLAST of hap2-g6272.t2 vs. ExPASy TrEMBL (2024)
Match: tr|V4TAU1|V4TAU1_CITCL (Homeobox domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10002354mg PE=4 SV=1) HSP 1 Score: 425.631 bits (1093), Expect = 1.689e-148 Identity = 209/245 (85.31%), Postives = 215/245 (87.76%), Query Frame = 0 Query: 1 MEWPNFQQGGEMERQFQQDGGDTSNGLCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNLESIQSLEDSAPPPRDEDIYPQSPDLGNKIFCFNVPLSTNISLFSVTCKFKIHGQFLLHERYAKFLFL 245 MEWPNFQQGGEMERQFQQDGGDTSNGLCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQN ESIQSLEDSAPPPRDEDIYPQSPDLG + + K +I G F H + ++ L Sbjct: 3 MEWPNFQQGGEMERQFQQDGGDTSNGLCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDEDIYPQSPDLG---------------IDQMIGKMEIPGSFSFHWQVDRYDML 232 HSP 2 Score: 66.2402 bits (160), Expect = 7.750e-9 Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 0 Query: 274 VGIDQMIGKLEIPGSFSFHWQVDRYDMLG 302 +GIDQMIGK+EIPGSFSFHWQVDRYDMLG Sbjct: 205 LGIDQMIGKMEIPGSFSFHWQVDRYDMLG 233
BLAST of hap2-g6272.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A067GZW5|A0A067GZW5_CITSI (Homeobox domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g026809mg PE=4 SV=1) HSP 1 Score: 425.631 bits (1093), Expect = 1.689e-148 Identity = 209/245 (85.31%), Postives = 215/245 (87.76%), Query Frame = 0 Query: 1 MEWPNFQQGGEMERQFQQDGGDTSNGLCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNLESIQSLEDSAPPPRDEDIYPQSPDLGNKIFCFNVPLSTNISLFSVTCKFKIHGQFLLHERYAKFLFL 245 MEWPNFQQGGEMERQFQQDGGDTSNGLCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQN ESIQSLEDSAPPPRDEDIYPQSPDLG + + K +I G F H + ++ L Sbjct: 3 MEWPNFQQGGEMERQFQQDGGDTSNGLCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDEDIYPQSPDLG---------------IDQMIGKMEIPGSFSFHWQVDRYDML 232 HSP 2 Score: 66.2402 bits (160), Expect = 7.750e-9 Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 0 Query: 274 VGIDQMIGKLEIPGSFSFHWQVDRYDMLG 302 +GIDQMIGK+EIPGSFSFHWQVDRYDMLG Sbjct: 205 LGIDQMIGKMEIPGSFSFHWQVDRYDMLG 233
BLAST of hap2-g6272.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A067GZI7|A0A067GZI7_CITSI (Homeobox domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g026809mg PE=4 SV=1) HSP 1 Score: 424.861 bits (1091), Expect = 2.672e-148 Identity = 203/204 (99.51%), Postives = 203/204 (99.51%), Query Frame = 0 Query: 1 MEWPNFQQGGEMERQFQQDGGDTSNGLCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNLESIQSLEDSAPPPRDEDIYPQSPDLG 204 MEWPNFQQGGEMERQFQQDGGDTSNGLCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQN ESIQSLEDSAPPPRDEDIYPQSPDLG Sbjct: 3 MEWPNFQQGGEMERQFQQDGGDTSNGLCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDEDIYPQSPDLG 206
BLAST of hap2-g6272.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A067H2J4|A0A067H2J4_CITSI (Homeobox domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g026809mg PE=4 SV=1) HSP 1 Score: 423.705 bits (1088), Expect = 4.517e-148 Identity = 202/205 (98.54%), Postives = 203/205 (99.02%), Query Frame = 0 Query: 1 MEWPNFQQGGEMERQFQQDGGDTSNGLCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNLESIQSLEDSAPPPRDEDIYPQSPDLGN 205 MEWPNFQQGGEMERQFQQDGGDTSNGLCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQN ESIQSLEDSAPPPRDEDIYPQSPDL + Sbjct: 3 MEWPNFQQGGEMERQFQQDGGDTSNGLCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDEDIYPQSPDLDD 207
BLAST of hap2-g6272.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A2H5PA83|A0A2H5PA83_CITUN (Homeobox domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_117940 PE=4 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 3.790e-93 Identity = 140/176 (79.55%), Postives = 146/176 (82.95%), Query Frame = 0 Query: 70 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNLESIQSLEDSAPPPRDEDIYPQSPDLGNKIFCFNVPLSTNISLFSVTCKFKIHGQFLLHERYAKFLFL 245 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQN ESIQSLEDSAPPPRDEDIYPQSPDLG + + K +I G F H + ++ L Sbjct: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDEDIYPQSPDLG---------------IDQMIGKMEIPGSFSFHWQVDRYDML 161 HSP 2 Score: 66.6254 bits (161), Expect = 1.825e-9 Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 0 Query: 274 VGIDQMIGKLEIPGSFSFHWQVDRYDMLG 302 +GIDQMIGK+EIPGSFSFHWQVDRYDMLG Sbjct: 134 LGIDQMIGKMEIPGSFSFHWQVDRYDMLG 162
BLAST of hap2-g6272.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A067HBB4|A0A067HBB4_CITSI (Homeobox domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g026809mg PE=4 SV=1) HSP 1 Score: 282.722 bits (722), Expect = 3.790e-93 Identity = 140/176 (79.55%), Postives = 146/176 (82.95%), Query Frame = 0 Query: 70 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNLESIQSLEDSAPPPRDEDIYPQSPDLGNKIFCFNVPLSTNISLFSVTCKFKIHGQFLLHERYAKFLFL 245 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQN ESIQSLEDSAPPPRDEDIYPQSPDLG + + K +I G F H + ++ L Sbjct: 1 MRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNPESIQSLEDSAPPPRDEDIYPQSPDLG---------------IDQMIGKMEIPGSFSFHWQVDRYDML 161 HSP 2 Score: 66.6254 bits (161), Expect = 1.825e-9 Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 0 Query: 274 VGIDQMIGKLEIPGSFSFHWQVDRYDMLG 302 +GIDQMIGK+EIPGSFSFHWQVDRYDMLG Sbjct: 134 LGIDQMIGKMEIPGSFSFHWQVDRYDMLG 162
BLAST of hap2-g6272.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0AA39VDY4|A0AA39VDY4_ACESA (Homeobox domain-containing protein OS=Acer saccharum OX=4024 GN=LWI29_022479 PE=4 SV=1) HSP 1 Score: 261.536 bits (667), Expect = 9.105e-84 Identity = 132/185 (71.35%), Postives = 144/185 (77.84%), Query Frame = 0 Query: 21 GDTSNGLCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNL-ESIQSLEDSAPPPRDEDIYPQSPDLG 204 G T GL KVMTDEQMELLRKQIAVYAMICEQLV MHK FSAQ + AGMR+GNPY DPF++SG QKLT RQRWTPTP QLQILE VYDEC G P KQKI DMTAELA HGQISETNVYNWFQNRRAR+KRKQSGV N ESEA+ H S+K ESIQS E+ + +IY QSP++G Sbjct: 20 GMTVEGLYAKVMTDEQMELLRKQIAVYAMICEQLVDMHKSFSAQYDTAGMRLGNPYLDPFMSSGGQKLTTRQRWTPTPVQLQILERVYDECSGNPGKQKILDMTAELAHHGQISETNVYNWFQNRRARIKRKQSGVPSNTTESEAK--KHVMSKKYTTPESIQSFENPTARITENNIYFQSPNIG 202
BLAST of hap2-g6272.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5C7H4H7|A0A5C7H4H7_9ROSI (Homeobox domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_021079 PE=4 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 6.954e-79 Identity = 127/183 (69.40%), Postives = 140/183 (76.50%), Query Frame = 0 Query: 23 TSNGLCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNL-ESIQSLEDSAPPPRDEDIYPQSPDLG 204 T L VKVMTDEQMELLRKQIAVYAMI EQLV+M SAQ +IAGMR+GNPY DPF++SG QKLT RQRWTPTP QLQILE VYDEC G P KQKI DMT ELA HGQISETNVYNWFQNRRAR+KRKQSGV N ESEA+ H S+K ESIQS E+ + +IY QSP++G Sbjct: 86 TVEELYVKVMTDEQMELLRKQIAVYAMISEQLVEMQNSLSAQYDIAGMRLGNPYLDPFMSSGGQKLTTRQRWTPTPVQLQILERVYDECSGNPGKQKILDMTTELAHHGQISETNVYNWFQNRRARIKRKQSGVPSNTTESEAK--KHVMSKKYTTPESIQSFENPTARITENNIYFQSPNIG 266 HSP 2 Score: 80.8777 bits (198), Expect = 9.971e-14 Identity = 39/53 (73.58%), Postives = 43/53 (81.13%), Query Frame = 0 Query: 21 GDTSNGLCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMG 73 G T+ GL KVMTDEQMELLRKQIAVYAMICEQLV MHK FSAQ + AG+ + Sbjct: 19 GMTAEGLYAKVMTDEQMELLRKQIAVYAMICEQLVDMHKSFSAQYDTAGLSIS 71
BLAST of hap2-g6272.t2 vs. ExPASy TrEMBL (2024)
Match: tr|A0A5J5B424|A0A5J5B424_9ASTE (Homeobox domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_026915 PE=4 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 2.188e-77 Identity = 141/302 (46.69%), Postives = 178/302 (58.94%), Query Frame = 0 Query: 1 MEWPNFQQGGEMERQFQQDGGDTSNGLCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQN-LESIQSLEDSAPPPRDEDIYPQSPDLGNKIFCFNVPLSTNISLFSVTCKFKIHGQFLLHERYAKFLFLILVSYTDVNWADARTNEQKISETIWGFCVGIDQMIGKLEIPGSFSFHWQVDRYDML 301 MEW +Q Q GG G+ VKVMTDEQMELLR+QI+VYA ICEQLV+MHK F+AQ +AGMR+GN Y DP V + K+TARQRWTPT QLQILE +++E GTP KQK +++TAEL++HGQISETNVYNWFQNRRAR KRKQ V PNN ESE E + K LES +S E++AP E++Y Q P++ ++ C + + +F + G D +KIS IDQ IGK+EI GSFS + Q + YDM+ Sbjct: 2 MEWNKLEQ-----LNHQNVGG----GIYVKVMTDEQMELLRRQISVYATICEQLVEMHKAFAAQQHLAGMRLGNLYCDPLVTAAGHKITARQRWTPTSVQLQILERIFNEGIGTPDKQKTKEITAELSQHGQISETNVYNWFQNRRARSKRKQLFVAPNNGESEVEAEDESPKEKNTKLESTKSQENTAPSA--ENLYFQDPEITAEMHCVDTQYNEGEPVFPSDHGLRSSGSL-----------------------DHLALYEKISR--------IDQFIGKMEIQGSFSPYQQTEGYDMV 261
BLAST of hap2-g6272.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q5QMM3|WOX8_ORYSJ (WUSCHEL-related homeobox 8 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX8 PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 2.140e-62 Identity = 94/133 (70.68%), Postives = 114/133 (85.71%), Query Frame = 0 Query: 29 VKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQ-NEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNN 160 VKVMTDEQME+LRKQI++YA ICEQLV+MH+ +AQ + IAGMR+GN Y DP + G K+TARQRWTPTP QLQILE+++D+ GTP KQKI+D+TAEL++HGQISETNVYNWFQNRRAR KRKQ+ +PNN Sbjct: 27 VKVMTDEQMEVLRKQISIYATICEQLVEMHRALTAQQDSIAGMRLGNLYCDPLMVPGGHKITARQRWTPTPMQLQILENIFDQGNGTPSKQKIKDITAELSQHGQISETNVYNWFQNRRARSKRKQAA-LPNN 158
BLAST of hap2-g6272.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|O81788|WOX13_ARATH (WUSCHEL-related homeobox 13 OS=Arabidopsis thaliana OX=3702 GN=WOX13 PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 1.223e-58 Identity = 102/206 (49.51%), Postives = 131/206 (63.59%), Query Frame = 0 Query: 27 LCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ-------SGVVPNNAESEAETVTHAESRKQNLESIQSLEDS-------------APPPRDEDIYPQSPDLGNKIFCFNV 212 + VKVMTDEQ E LRKQIA+Y ICE+LV+MHK +AQ ++AG RMG Y DP ++S K+TARQRWTPTP QLQILE ++D+ GTP KQKI+D+T EL++HGQI+E NVYNWFQNRRAR KRKQ + + E+E E + E R ES+ L D PR ED+ QSP++ + + +V Sbjct: 33 MYVKVMTDEQYETLRKQIAIYGTICERLVEMHKTLTAQQDLAGGRMGGLYADPMMSSLGHKMTARQRWTPTPVQLQILERIFDQGTGTPSKQKIKDITEELSQHGQIAEQNVYNWFQNRRARSKRKQHGGGSSGNNNGESEVETEVEALN--EKRVVRPESLLGLPDGNSNNNGLGTTTATTTAPRPEDLCFQSPEISSDLHLLDV 236
BLAST of hap2-g6272.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LM84|WOX14_ARATH (WUSCHEL-related homeobox 14 OS=Arabidopsis thaliana OX=3702 GN=WOX14 PE=1 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.159e-50 Identity = 91/178 (51.12%), Postives = 118/178 (66.29%), Query Frame = 0 Query: 30 KVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIA-GMR-MGNPYFDPFVASGS-QKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNLESIQSLEDSAPPPRDEDIYPQSPDLG 204 +VMT+EQME+LRKQIAVYA+IC+QLV +H S+ + ++ G+R M YFDP AS S +++ R RWTPT QLQILE +YDE GTP +++I+++ EL++HGQI+ETNVYNWFQNRRAR KRKQ N +++ VT E R S DS E I SPDLG Sbjct: 29 RVMTEEQMEILRKQIAVYAVICDQLVLLHNSLSSYHPLSSGVRPMVGGYFDPMGASSSSHRISTRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNWFQNRRARSKRKQPQTTTANGQADDVAVTTEERR--------SCGDSGGLESYEHILFPSPDLG 198
BLAST of hap2-g6272.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9LM83|WOX10_ARATH (Putative WUSCHEL-related homeobox 10 OS=Arabidopsis thaliana OX=3702 GN=WOX10 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.062e-36 Identity = 88/181 (48.62%), Postives = 114/181 (62.98%), Query Frame = 0 Query: 30 KVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIA-GMR-MGNPYFDPFVASGS-QKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ---SGVVPNNAESEAETVTHAESRKQNLESIQSLEDSAPPPRDEDIYPQSPDLG 204 +VMTDEQME LRKQIA+YA++C+QLV +H S+ ++ GM M YFDP VAS S ++ R RWTPT QLQILE++Y E GTP ++I+++T EL++HGQI E NVY+WFQNRRAR KRKQ + + + A+ A T T R +DS E I SPDLG Sbjct: 13 RVMTDEQMETLRKQIAIYAVLCDQLVFLHNSLSSVPLLSSGMNPMRGEYFDPMVASSSAHGMSTRPRWTPTTTQLQILENIYKEGSGTPNPRRIKEITMELSEHGQIMEKNVYHWFQNRRARSKRKQPPTTTITSSQADDAAVTTTEERGR--------CGDDSGGFESYEHILFPSPDLG 185
BLAST of hap2-g6272.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q9SIB4|WOX3_ARATH (WUSCHEL-related homeobox 3 OS=Arabidopsis thaliana OX=3702 GN=WOX3 PE=1 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 9.740e-11 Identity = 31/64 (48.44%), Postives = 40/64 (62.50%), Query Frame = 0 Query: 89 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 152 A RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +AR ++K Sbjct: 4 VASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARDRQK 67
BLAST of hap2-g6272.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q6X7K0|WOX1_ARATH (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2) HSP 1 Score: 64.6994 bits (156), Expect = 1.423e-10 Identity = 28/61 (45.90%), Postives = 42/61 (68.85%), Query Frame = 0 Query: 93 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 153 RW PTP QL++LE +Y + TP IQ +TA+L ++G+I NV+ WFQN +AR ++K+ Sbjct: 76 RWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQKR 136
BLAST of hap2-g6272.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q6X7J5|WOX8_ARATH (WUSCHEL-related homeobox 8 OS=Arabidopsis thaliana OX=3702 GN=WOX8 PE=2 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 3.383e-10 Identity = 25/62 (40.32%), Postives = 41/62 (66.13%), Query Frame = 0 Query: 91 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 152 + RW P P Q++ILE +++ P +++IQ + L ++GQI + NV+ WFQNR++R K K Sbjct: 53 KPRWNPKPEQIRILESIFNSGTINPPREEIQRIRIRLQEYGQIGDANVFYWFQNRKSRAKHK 114
BLAST of hap2-g6272.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q5W7C3|WOX2_ORYSJ (Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX2 PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 7.405e-10 Identity = 28/60 (46.67%), Postives = 39/60 (65.00%), Query Frame = 0 Query: 93 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 152 RW PTP QL +LE +Y TP +IQ +TA L+ +G+I NV+ WFQN +AR ++K Sbjct: 27 RWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQK 86
BLAST of hap2-g6272.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|A2XZR3|WOX2_ORYSI (Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. indica OX=39946 GN=WOX2 PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 8.852e-10 Identity = 28/60 (46.67%), Postives = 39/60 (65.00%), Query Frame = 0 Query: 93 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 152 RW PTP QL +LE +Y TP +IQ +TA L+ +G+I NV+ WFQN +AR ++K Sbjct: 27 RWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQK 86
BLAST of hap2-g6272.t2 vs. ExPASy Swiss-Prot (2024)
Match: sp|Q6X7J4|WOX9_ARATH (WUSCHEL-related homeobox 9 OS=Arabidopsis thaliana OX=3702 GN=WOX9 PE=2 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 8.911e-10 Identity = 24/62 (38.71%), Postives = 43/62 (69.35%), Query Frame = 0 Query: 91 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 152 + RW P P Q++ILE +++ P +++I+ + A+L ++GQ+ + NV+ WFQNR++R K K Sbjct: 53 KPRWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 114
BLAST of hap2-g6272.t2 vs. Araport11
Match: | (Symbols: HB-4, ATWOX13, WOX13 | WUSCHEL related homeobox 13 | chr4:16875814-16877167 REVERSE LENGTH=268) HSP 1 Score: 191.815 bits (486), Expect = 1.274e-59 Identity = 102/206 (49.51%), Postives = 131/206 (63.59%), Query Frame = 0 Query: 27 LCVKVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIAGMRMGNPYFDPFVASGSQKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ-------SGVVPNNAESEAETVTHAESRKQNLESIQSLEDS-------------APPPRDEDIYPQSPDLGNKIFCFNV 212 + VKVMTDEQ E LRKQIA+Y ICE+LV+MHK +AQ ++AG RMG Y DP ++S K+TARQRWTPTP QLQILE ++D+ GTP KQKI+D+T EL++HGQI+E NVYNWFQNRRAR KRKQ + + E+E E + E R ES+ L D PR ED+ QSP++ + + +V Sbjct: 33 MYVKVMTDEQYETLRKQIAIYGTICERLVEMHKTLTAQQDLAGGRMGGLYADPMMSSLGHKMTARQRWTPTPVQLQILERIFDQGTGTPSKQKIKDITEELSQHGQIAEQNVYNWFQNRRARSKRKQHGGGSSGNNNGESEVETEVEALN--EKRVVRPESLLGLPDGNSNNNGLGTTTATTTAPRPEDLCFQSPEISSDLHLLDV 236
BLAST of hap2-g6272.t2 vs. Araport11
Match: | (Symbols: WOX14, ATWOX14 | WUSCHEL RELATED HOMEOBOX 14, WUSCHEL related homeobox 14 | chr1:7182558-7183752 FORWARD LENGTH=202) HSP 1 Score: 173.326 bits (438), Expect = 3.382e-53 Identity = 93/182 (51.10%), Postives = 120/182 (65.93%), Query Frame = 0 Query: 30 KVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIA-GMR-MGNPYFDPFVASGS-QKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNLESIQSLEDSAPPPRDEDIYPQSPDLGNKIF 208 +VMT+EQME+LRKQIAVYA+IC+QLV +H S+ + ++ G+R M YFDP AS S +++ R RWTPT QLQILE +YDE GTP +++I+++ EL++HGQI+ETNVYNWFQNRRAR KRKQ N +++ VT E R S DS E I SPDLG KI Sbjct: 29 RVMTEEQMEILRKQIAVYAVICDQLVLLHNSLSSYHPLSSGVRPMVGGYFDPMGASSSSHRISTRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNWFQNRRARSKRKQPQTTTANGQADDVAVTTEERR--------SCGDSGGLESYEHILFPSPDLGKKII 202
BLAST of hap2-g6272.t2 vs. Araport11
Match: | (Symbols: WOX14, ATWOX14 | WUSCHEL RELATED HOMEOBOX 14, WUSCHEL related homeobox 14 | chr1:7182558-7183866 FORWARD LENGTH=211) HSP 1 Score: 169.474 bits (428), Expect = 1.207e-51 Identity = 91/178 (51.12%), Postives = 118/178 (66.29%), Query Frame = 0 Query: 30 KVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIA-GMR-MGNPYFDPFVASGS-QKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNLESIQSLEDSAPPPRDEDIYPQSPDLG 204 +VMT+EQME+LRKQIAVYA+IC+QLV +H S+ + ++ G+R M YFDP AS S +++ R RWTPT QLQILE +YDE GTP +++I+++ EL++HGQI+ETNVYNWFQNRRAR KRKQ N +++ VT E R S DS E I SPDLG Sbjct: 29 RVMTEEQMEILRKQIAVYAVICDQLVLLHNSLSSYHPLSSGVRPMVGGYFDPMGASSSSHRISTRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNWFQNRRARSKRKQPQTTTANGQADDVAVTTEERR--------SCGDSGGLESYEHILFPSPDLG 198
BLAST of hap2-g6272.t2 vs. Araport11
Match: | (Symbols: WOX13B, WOX10 | WUSCHEL related homeobox 10, WUSCHEL related homeobox 13B | chr1:7184485-7185267 FORWARD LENGTH=197) HSP 1 Score: 132.494 bits (332), Expect = 2.144e-37 Identity = 88/181 (48.62%), Postives = 114/181 (62.98%), Query Frame = 0 Query: 30 KVMTDEQMELLRKQIAVYAMICEQLVQMHKVFSAQNEIA-GMR-MGNPYFDPFVASGS-QKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ---SGVVPNNAESEAETVTHAESRKQNLESIQSLEDSAPPPRDEDIYPQSPDLG 204 +VMTDEQME LRKQIA+YA++C+QLV +H S+ ++ GM M YFDP VAS S ++ R RWTPT QLQILE++Y E GTP ++I+++T EL++HGQI E NVY+WFQNRRAR KRKQ + + + A+ A T T R +DS E I SPDLG Sbjct: 13 RVMTDEQMETLRKQIAIYAVLCDQLVFLHNSLSSVPLLSSGMNPMRGEYFDPMVASSSAHGMSTRPRWTPTTTQLQILENIYKEGSGTPNPRRIKEITMELSEHGQIMEKNVYHWFQNRRARSKRKQPPTTTITSSQADDAAVTTTEERGR--------CGDDSGGFESYEHILFPSPDLG 185
BLAST of hap2-g6272.t2 vs. Araport11
Match: | (Symbols: WOX14, ATWOX14 | WUSCHEL RELATED HOMEOBOX 14, WUSCHEL related homeobox 14 | chr1:7183330-7183866 FORWARD LENGTH=149) HSP 1 Score: 123.25 bits (308), Expect = 2.002e-34 Identity = 68/138 (49.28%), Postives = 85/138 (61.59%), Query Frame = 0 Query: 69 GMR-MGNPYFDPFVASGS-QKLTARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQSGVVPNNAESEAETVTHAESRKQNLESIQSLEDSAPPPRDEDIYPQSPDLG 204 G+R M YFDP AS S +++ R RWTPT QLQILE +YDE GTP +++I+++ EL++HGQI+ETNVYNWFQNRRAR KRKQ N +++ VT E R S DS E I SPDLG Sbjct: 7 GVRPMVGGYFDPMGASSSSHRISTRHRWTPTSTQLQILESIYDEGSGTPNRRRIREIATELSEHGQITETNVYNWFQNRRARSKRKQPQTTTANGQADDVAVTTEERR--------SCGDSGGLESYEHILFPSPDLG 136
BLAST of hap2-g6272.t2 vs. Araport11
Match: | (Symbols: PRS1, WOX3, PRS | PRESSED FLOWER 1, PRESSED FLOWER, WUSCHEL RELATED HOMEOBOX 3 | chr2:12262115-12263286 FORWARD LENGTH=244) HSP 1 Score: 64.3142 bits (155), Expect = 9.958e-12 Identity = 31/64 (48.44%), Postives = 40/64 (62.50%), Query Frame = 0 Query: 89 TARQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 152 A RW PTP QL ILE +Y TP +IQ +TA LA +G+I NV+ WFQN +AR ++K Sbjct: 4 VASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARDRQK 67
BLAST of hap2-g6272.t2 vs. Araport11
Match: | (Symbols: WOX1 | WUSCHEL related homeobox 1 | chr3:6161155-6163183 REVERSE LENGTH=350) HSP 1 Score: 64.6994 bits (156), Expect = 1.444e-11 Identity = 28/61 (45.90%), Postives = 42/61 (68.85%), Query Frame = 0 Query: 93 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 153 RW PTP QL++LE +Y + TP IQ +TA+L ++G+I NV+ WFQN +AR ++K+ Sbjct: 76 RWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQKR 136
BLAST of hap2-g6272.t2 vs. Araport11
Match: | (Symbols: WOX9B, STPL, WOX8 | STIMPY-LIKE, WUSCHEL related homeobox 9B, WUSCHEL related homeobox 8 | chr5:18648921-18650698 FORWARD LENGTH=325) HSP 1 Score: 63.5438 bits (153), Expect = 3.438e-11 Identity = 25/62 (40.32%), Postives = 41/62 (66.13%), Query Frame = 0 Query: 91 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 152 + RW P P Q++ILE +++ P +++IQ + L ++GQI + NV+ WFQNR++R K K Sbjct: 53 KPRWNPKPEQIRILESIFNSGTINPPREEIQRIRIRLQEYGQIGDANVFYWFQNRKSRAKHK 114
BLAST of hap2-g6272.t2 vs. Araport11
Match: | (Symbols: WOX4 | WUSCHEL related homeobox 4 | chr1:17237162-17237953 REVERSE LENGTH=190) HSP 1 Score: 61.2326 bits (147), Expect = 5.831e-11 Identity = 28/61 (45.90%), Postives = 40/61 (65.57%), Query Frame = 0 Query: 93 RWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRKQ 153 RW PT Q+ ILE +Y TP Q+I+ +T +L K+G+I NV+ WFQN +AR ++KQ Sbjct: 90 RWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQKQ 150
BLAST of hap2-g6272.t2 vs. Araport11
Match: | (Symbols: WOX9A, STIP, HB-3, WOX9 | STIMPY, WUSCHEL-RELATED HOMEOBOX 9, WUSCHEL related homeobox 9A, homeobox-3 | chr2:14342037-14343597 REVERSE LENGTH=388) HSP 1 Score: 62.7734 bits (151), Expect = 8.550e-11 Identity = 24/62 (38.71%), Postives = 43/62 (69.35%), Query Frame = 0 Query: 91 RQRWTPTPAQLQILEHVYDECKGTPRKQKIQDMTAELAKHGQISETNVYNWFQNRRARLKRK 152 + RW P P Q++ILE +++ P +++I+ + A+L ++GQ+ + NV+ WFQNR++R K K Sbjct: 53 KPRWNPKPEQIRILEAIFNSGMVNPPREEIRRIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 114 The following BLAST results are available for this feature:
BLAST of hap2-g6272.t2 vs. ExPASy TrEMBL (2024)
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of hap2-g6272.t2 vs. ExPASy Swiss-Prot (2024)
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of hap2-g6272.t2 vs. Araport11
Analysis Date: 2024-10-02 (Blastp of Citrus garrawayi UQ v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus garrawayi UQ v1.0 proteins
Date Performed: 2024-10-02 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >hap2-g6272.t2_Cgarrawayi-UQ_v1 ID=hap2-g6272.t2_Cgarrawayi-UQ_v1; Name=hap2-g6272.t2; organism=Citrus garrawayi; type=mRNA; length=909bpback to top protein sequence of hap2-g6272.t2_Cgarrawayi-UQ_v1 >hap2-g6272.t2_Cgarrawayi-UQ_v1 ID=hap2-g6272.t2_Cgarrawayi-UQ_v1; Name=hap2-g6272.t2_Cgarrawayi-UQ_v1; organism=Citrus garrawayi; type=polypeptide; length=303bpback to top mRNA from alignment at hap2-C.garr_03:468900..470470- Legend: polypeptideCDSexonstart_codonintronstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=1571bp; location=Sequence derived from: hap2-C.garr_03:468900..470470- (Citrus garrawayiback to top Coding sequence (CDS) from alignment at hap2-C.garr_03:468900..470470- >hap2-g6272.t2_Cgarrawayi-UQ_v1 ID=hap2-g6272.t2_Cgarrawayi-UQ_v1; Name=hap2-g6272.t2; organism=Citrus garrawayi; type=CDS; length=909bp; location=Sequence derived from: hap2-C.garr_03:468900..470470- (Citrus garrawayiback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|