mi_v1.0.alternate_g18915.t1
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of mi_v1.0.alternate_g18915.t1 vs. ExPASy TrEMBL
Match: V4UVP8|V4UVP8_CITCL (Hydroxymethylglutaryl-CoA lyase OS=Citrus clementina OX=85681 GN=CICLE_v10011898mg PE=3 SV=1) HSP 1 Score: 635.18 bits (1637), Expect = 0.000e+0 Identity = 313/315 (99.37%), Postives = 313/315 (99.37%), Query Frame = 0 Query: 1 MQKAKSLDKFSRSALSPLMSNLKESLGVAKFASIGVNSLKGGNLDYTREKKNSRKQVRNVSCTNLNGYLSKAHYSSSCTDNSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
MQKAKSLDKFSRSALSPLMSN KESLGVAKFASIGVNSLKGGNLDYTREKK SRKQVRNVSCTNLNGYLSKAHYSSSCTDNSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ
Sbjct: 1 MQKAKSLDKFSRSALSPLMSNSKESLGVAKFASIGVNSLKGGNLDYTREKKISRKQVRNVSCTNLNGYLSKAHYSSSCTDNSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
BLAST of mi_v1.0.alternate_g18915.t1 vs. ExPASy TrEMBL
Match: A0A2H5NU72|A0A2H5NU72_CITUN (Hydroxymethylglutaryl-CoA lyase OS=Citrus unshiu OX=55188 GN=CUMW_076360 PE=3 SV=1) HSP 1 Score: 625.55 bits (1612), Expect = 0.000e+0 Identity = 311/322 (96.58%), Postives = 312/322 (96.89%), Query Frame = 0 Query: 1 MQKAKSLDKFSRSALSPLMSNLKESLGVAKFASIGVNSLKGGNLDYTREKKNSRKQVRNVSCTNLNGYLSKAHYSSSCTDNSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGT-------PGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
MQKAKSLDKFSRSALSPLMSNLKESLGVAKFAS+GVNSLKGGNLDYTREK SRKQVRNVSCTNLNGYLSKAHYSSSCTDNSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGL VVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGT PGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ
Sbjct: 1 MQKAKSLDKFSRSALSPLMSNLKESLGVAKFASVGVNSLKGGNLDYTREKTISRKQVRNVSCTNLNGYLSKAHYSSSCTDNSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLAVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPVLLFLGPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 322
BLAST of mi_v1.0.alternate_g18915.t1 vs. ExPASy TrEMBL
Match: A0A6P6GDL3|A0A6P6GDL3_ZIZJJ (Hydroxymethylglutaryl-CoA lyase OS=Ziziphus jujuba OX=326968 GN=LOC107421846 PE=3 SV=1) HSP 1 Score: 452.595 bits (1163), Expect = 6.820e-156 Identity = 230/329 (69.91%), Postives = 254/329 (77.20%), Query Frame = 0 Query: 17 PLMSNLKESLGVAKFASIGVNSLKGG----------------NLDYTREKKNSRKQVRNVS--------------CTNLNGYLSKAHYSSSCTDNSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
P+MS+L ESL A F S G N+LK G N +YT++ R+Q RNVS N G S HYSS D T +L +K L +P FVKIVEVGPRDGLQNEK+I+P +KVELIKLLVSSGLPVVEATSFVSPKWVPQLAD KDVM AI+N++GARFPVLTPNLKGFEAAV+AGAKEVAIFASASESFSKSNINC+IEDSLIRYR V LAA+ELSIPVRGY+SCVVGCPVEG V PS+VAYV ++LYDMGCSEISLGDTIGVGTPGTVIPMLEAV D VP+DKLAVHFHDTYGQALSNIL SLQ
Sbjct: 24 PVMSHLDESLAFANFTSTGTNTLKKGAEHWCSGWRSSTFKRGNDEYTKDAFLWRRQTRNVSRGDIVKNQTLTRLGLNNNAGCFSSRHYSSHLKDKGTGELVNKFLQNIPEFVKIVEVGPRDGLQNEKHIIPTAIKVELIKLLVSSGLPVVEATSFVSPKWVPQLADGKDVMEAIRNLKGARFPVLTPNLKGFEAAVSAGAKEVAIFASASESFSKSNINCSIEDSLIRYRGVVLAAKELSIPVRGYISCVVGCPVEGNVSPSQVAYVVRELYDMGCSEISLGDTIGVGTPGTVIPMLEAVTDVVPIDKLAVHFHDTYGQALSNILISLQ 352
BLAST of mi_v1.0.alternate_g18915.t1 vs. ExPASy TrEMBL
Match: A0A2I4DTW1|A0A2I4DTW1_JUGRE (Hydroxymethylglutaryl-CoA lyase OS=Juglans regia OX=51240 GN=LOC108979661 PE=3 SV=1) HSP 1 Score: 444.121 bits (1141), Expect = 9.373e-153 Identity = 229/341 (67.16%), Postives = 264/341 (77.42%), Query Frame = 0 Query: 1 MQKAKSLDKFSRSA------LSPLMSNLKESLGVAKFASIGVNSLKGGNLDYTREKKNSRKQVR-NVSCTNLNGYLS-------------------KAHYSSSCTDNSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
M +SL+KFS+S+ L P+M+NL+E GV K +SIG ++LK + E RKQ R +NG L+ HYSS C D T +L++K L +P ++ IVEVGPRDGLQNEK IVP VKVELIK+LVSSGLP+VEATSFVSPKWVPQLADAKDVM AIQNVEGARFPVLTPN+KGFEAAVAAGAKEVA+FA+ASESFSKSNINC+IE+SL RYRDVALAA +LS PVRGY+SCVVGCP+EGMV P+KVAYV+++LYDMGCSEI+LGDTIGVGTPGTVIPMLEAV+ VPVDKLAVHFHDTYGQALSNIL SLQ
Sbjct: 1 MLAVRSLNKFSQSSTFFFHKLIPVMANLEEPQGVTKPSSIGADTLK--RCEDIGEASLWRKQKRITFQGDTVNGALASRGWNYQSLGNARDAWCLVNRHYSSHCNDKCTGELSNKFLRSIPEYINIVEVGPRDGLQNEKQIVPTSVKVELIKMLVSSGLPIVEATSFVSPKWVPQLADAKDVMEAIQNVEGARFPVLTPNVKGFEAAVAAGAKEVAVFAAASESFSKSNINCSIEESLTRYRDVALAAGKLSFPVRGYISCVVGCPMEGMVAPAKVAYVARELYDMGCSEIALGDTIGVGTPGTVIPMLEAVMGFVPVDKLAVHFHDTYGQALSNILVSLQ 339
BLAST of mi_v1.0.alternate_g18915.t1 vs. ExPASy TrEMBL
Match: A0A6P9E6T3|A0A6P9E6T3_JUGRE (Hydroxymethylglutaryl-CoA lyase OS=Juglans regia OX=51240 GN=LOC108979661 PE=3 SV=1) HSP 1 Score: 444.121 bits (1141), Expect = 2.429e-152 Identity = 229/341 (67.16%), Postives = 264/341 (77.42%), Query Frame = 0 Query: 1 MQKAKSLDKFSRSA------LSPLMSNLKESLGVAKFASIGVNSLKGGNLDYTREKKNSRKQVR-NVSCTNLNGYLS-------------------KAHYSSSCTDNSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
M +SL+KFS+S+ L P+M+NL+E GV K +SIG ++LK + E RKQ R +NG L+ HYSS C D T +L++K L +P ++ IVEVGPRDGLQNEK IVP VKVELIK+LVSSGLP+VEATSFVSPKWVPQLADAKDVM AIQNVEGARFPVLTPN+KGFEAAVAAGAKEVA+FA+ASESFSKSNINC+IE+SL RYRDVALAA +LS PVRGY+SCVVGCP+EGMV P+KVAYV+++LYDMGCSEI+LGDTIGVGTPGTVIPMLEAV+ VPVDKLAVHFHDTYGQALSNIL SLQ
Sbjct: 28 MLAVRSLNKFSQSSTFFFHKLIPVMANLEEPQGVTKPSSIGADTLK--RCEDIGEASLWRKQKRITFQGDTVNGALASRGWNYQSLGNARDAWCLVNRHYSSHCNDKCTGELSNKFLRSIPEYINIVEVGPRDGLQNEKQIVPTSVKVELIKMLVSSGLPIVEATSFVSPKWVPQLADAKDVMEAIQNVEGARFPVLTPNVKGFEAAVAAGAKEVAVFAAASESFSKSNINCSIEESLTRYRDVALAAGKLSFPVRGYISCVVGCPMEGMVAPAKVAYVARELYDMGCSEIALGDTIGVGTPGTVIPMLEAVMGFVPVDKLAVHFHDTYGQALSNILVSLQ 366
BLAST of mi_v1.0.alternate_g18915.t1 vs. ExPASy TrEMBL
Match: A0A067L0T6|A0A067L0T6_JATCU (Hydroxymethylglutaryl-CoA lyase OS=Jatropha curcas OX=180498 GN=JCGZ_06351 PE=3 SV=1) HSP 1 Score: 441.039 bits (1133), Expect = 1.495e-151 Identity = 230/332 (69.28%), Postives = 264/332 (79.52%), Query Frame = 0 Query: 5 KSLDKFSR--SALS-----PLMSNLKESLGVAKFASIGVN-SLKGGN-----LDYTREKKNSRK--------QVRNVSCTNLNGYLSKAHYSSSCTDNSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
K+LDK R + LS PLM N S S N SLKG N + ++ +++N + ++ NVSC + +LSK +Y+S+ D +++ +KLL +P +VKIVEVGPRDGLQNEK IVP VKVELI++LVSSGLPVVEATSFVSPKWVPQLADAKDVMAA++N EGAR PVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSL+RY DV+LAA +LSIPVRGY+SCVVGCPVEGMV PS VAYV+K+LY+MGCSEISLGDTIGVGTPGTVIPMLEAVLD VP+DKLAVHFHDTYGQALSNILASLQ
Sbjct: 6 KALDKLYRHYTLLSNPTYFPLMINSDNSCCFHGNTSFQSNFSLKGANESQGTMLWSGQRRNISRVGLQWNSMEIDNVSCHDW--HLSKRYYNSNPNDKHSREFANKLLKSIPEYVKIVEVGPRDGLQNEKEIVPTAVKVELIRMLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAVRNFEGARLPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLVRYNDVSLAANKLSIPVRGYISCVVGCPVEGMVSPSNVAYVAKRLYEMGCSEISLGDTIGVGTPGTVIPMLEAVLDVVPIDKLAVHFHDTYGQALSNILASLQ 335
BLAST of mi_v1.0.alternate_g18915.t1 vs. ExPASy TrEMBL
Match: A0A6P9DUC8|A0A6P9DUC8_JUGRE (Hydroxymethylglutaryl-CoA lyase OS=Juglans regia OX=51240 GN=LOC109002037 PE=3 SV=1) HSP 1 Score: 436.802 bits (1122), Expect = 5.227e-151 Identity = 228/341 (66.86%), Postives = 264/341 (77.42%), Query Frame = 0 Query: 1 MQKAKSLDKFSRSA------LSPLMSNLKESLGVAKFASIGVNSLKGGNLDYTREKKNSRKQVRNVSCTN-LNGYLSKA-------------------HYSSSCTDNSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
M +SL+KFS+S L +M+NL+ES GV K +SIG ++L+ + T E RKQ R S + +NG L+ HYSS C D T +L++K L +P ++KIVEVGP DGLQNEK IVP VK +LIK+LVSSGLP+VEATSFVSPKWVPQLADAKDVM AI+NVEGARFPVLTPN+KGFEAAVAAGAKEVAIFA+ASESFSK NINC+IE+SL RYRDVALAA +LS PVRGY+SCVVGCP+EGMV P+KVAYV+++LYDMGCSEISLGDTIGVGTPGTVIPMLEAV+ VPVDKLAVHFHDTYGQALSNIL SLQ
Sbjct: 1 MLALRSLNKFSQSTTFFFHKLVLVMANLEESQGVTKPSSIGADTLE--RHEDTGEASFWRKQKRITSQGDTVNGALASWGWNYQSLGNARDAWCLVNRHYSSHCNDKYTGELSNKFLRSIPEYIKIVEVGPTDGLQNEKQIVPTSVKAKLIKMLVSSGLPIVEATSFVSPKWVPQLADAKDVMEAIRNVEGARFPVLTPNVKGFEAAVAAGAKEVAIFAAASESFSKFNINCSIEESLTRYRDVALAAGKLSFPVRGYISCVVGCPMEGMVAPAKVAYVARKLYDMGCSEISLGDTIGVGTPGTVIPMLEAVMGFVPVDKLAVHFHDTYGQALSNILVSLQ 339
BLAST of mi_v1.0.alternate_g18915.t1 vs. ExPASy TrEMBL
Match: A0A6P9DUM1|A0A6P9DUM1_JUGRE (Hydroxymethylglutaryl-CoA lyase OS=Juglans regia OX=51240 GN=LOC108983416 PE=3 SV=1) HSP 1 Score: 437.573 bits (1124), Expect = 3.536e-150 Identity = 228/341 (66.86%), Postives = 264/341 (77.42%), Query Frame = 0 Query: 1 MQKAKSLDKFSRSA------LSPLMSNLKESLGVAKFASIGVNSLKGGNLDYTREKKNSRKQVRNVSCTN-LNGYLS-------------------KAHYSSSCTDNSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
M +SL+KFS+S L +M+NL+ES GV K +SIG ++L+ + T E RKQ R S + +NG L+ HYSS C D T +L++K L +P ++KIVEVGP DGLQNEK IVP VK +LIK+LVSSGLP+VEATSFVSPKWVPQLADAKDVM AI+NVEGARFPVLTPN+KGFEAAVAAGAKEVAIFA+ASESFSK NINC+IE+SL RYRDVALAA +LS PVRGY+SCVVGCP+EGMV P+KVAYV+++LYDMGCSEISLGDTIGVGTPGTVIPMLEAV+ VPVDKLAVHFHDTYGQALSNIL SLQ
Sbjct: 1 MLALRSLNKFSQSTTFFFHKLVLVMANLEESQGVTKPSSIGADTLE--RREDTGEASFWRKQKRITSQGDTVNGALASRGWNYQSLGHARDAWCLVNRHYSSHCNDKYTGELSNKFLRSIPEYIKIVEVGPTDGLQNEKQIVPTSVKAKLIKMLVSSGLPIVEATSFVSPKWVPQLADAKDVMEAIRNVEGARFPVLTPNVKGFEAAVAAGAKEVAIFAAASESFSKFNINCSIEESLTRYRDVALAAGKLSFPVRGYISCVVGCPMEGMVAPAKVAYVARKLYDMGCSEISLGDTIGVGTPGTVIPMLEAVMGFVPVDKLAVHFHDTYGQALSNILVSLQ 339
BLAST of mi_v1.0.alternate_g18915.t1 vs. ExPASy TrEMBL
Match: F6HQN4|F6HQN4_VITVI (Hydroxymethylglutaryl-CoA lyase OS=Vitis vinifera OX=29760 GN=VIT_08s0040g01170 PE=3 SV=1) HSP 1 Score: 436.032 bits (1120), Expect = 5.751e-150 Identity = 223/298 (74.83%), Postives = 244/298 (81.88%), Query Frame = 0 Query: 38 SLKGGNLDYTREKKNSRKQVRNVSCTN-LNG-------------------YLSKAHYSSSCTDNSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
S +G +YT E R+Q+RNVS + LN YL+ YSS C D T+D +KLL +PGFVKIVEVGPRDGLQNEK+IVP VVKVELIK+LVSSGLP+VEATSFVSPKWVPQLADAKDVM AI+ VEG RFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINC+IEDSL RYRDVALAAR+LSIPVRGY+SCVVGCP+EG+V PSKV YV K+LYDMGC EISLGDTIGVGTPGTVIPMLE V+D VP+DKLAVHFHDTYGQALSNILASLQ
Sbjct: 19 SRRGRGYEYTEEVCPWRRQMRNVSRGDFLNRTPANMSRNHRVFRSVPDACYLTDRPYSSHCNDECTRD--NKLLRSMPGFVKIVEVGPRDGLQNEKDIVPTVVKVELIKMLVSSGLPIVEATSFVSPKWVPQLADAKDVMEAIRTVEGGRFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCSIEDSLTRYRDVALAARKLSIPVRGYISCVVGCPLEGVVSPSKVTYVGKELYDMGCYEISLGDTIGVGTPGTVIPMLEDVIDVVPIDKLAVHFHDTYGQALSNILASLQ 314
BLAST of mi_v1.0.alternate_g18915.t1 vs. ExPASy TrEMBL
Match: A0A5B7AQF3|A0A5B7AQF3_DAVIN (Hydroxymethylglutaryl-CoA lyase OS=Davidia involucrata OX=16924 GN=Din_026774 PE=3 SV=1) HSP 1 Score: 433.721 bits (1114), Expect = 2.334e-148 Identity = 224/323 (69.35%), Postives = 252/323 (78.02%), Query Frame = 0 Query: 7 LDKFSRSALSPLMSNLKE-SLGVAKFASIGVNSLKGGNLDYTREKKNSRKQVRNVSCTNLN-------GYLSKA------HYSSSCTDNSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
+DK +S + M E G F S K N + T E R+Q+++VS + + G LS A HYSS DN +D+ +K L +PG VKIVEVGPRDGLQNEK IVP VKVELIK+LVSSGLPVVEATSFVSPKWVPQLADAKDV+ AI++VEG RFPVLTPNLKGFEAAVAAGAKEVAIFA+ASESFS+SNINC+IEDSL RY DVALAAR+LSIPVRGY+SCVVGCPVEG VPPSKVAYV+K+L+DMGCSEISLGDTIGVGTPG VIPMLEAV+D VPV+KLAVHFHDTYGQALSNIL SLQ
Sbjct: 42 VDKLQKSCIGAFMGRANEMDTGNLWFEGRSRCSFKSRNDENTSEAFPWRRQIKSVSLGHFSNQPPGVFGTLSDAVYVPDRHYSSQYNDNCIRDVKNKFLRTIPGSVKIVEVGPRDGLQNEKEIVPTAVKVELIKMLVSSGLPVVEATSFVSPKWVPQLADAKDVIEAIRSVEGTRFPVLTPNLKGFEAAVAAGAKEVAIFAAASESFSRSNINCSIEDSLSRYHDVALAARKLSIPVRGYISCVVGCPVEGAVPPSKVAYVAKELFDMGCSEISLGDTIGVGTPGAVIPMLEAVIDVVPVEKLAVHFHDTYGQALSNILVSLQ 364
BLAST of mi_v1.0.alternate_g18915.t1 vs. Araport11
Match: AT2G26800.5 (| Aldolase superfamily protein | Chr2:11429192-11431960 REVERSE LENGTH=388 | 201606) HSP 1 Score: 394.045 bits (1011), Expect = 4.063e-137 Identity = 196/280 (70.00%), Postives = 228/280 (81.43%), Query Frame = 0 Query: 46 YTREKKNSRKQVRNVS----CTNLNGYLSKAH------YSSSCTDNSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
+TR+ RN+S + ++G L ++ YS+ +N T +++K+ +P FVKIVEVGPRDGLQNEKNIVP VKVELI+ LVSSGLPVVEATSFVSPKWVPQLADAKDVM A+ ++GAR PVLTPNLKGF+AAV+AGAKEVAIFASASESFS SNINCTIE+SL+RYR VA AA+E S+PVRGY+SCVVGCPVEG V PSKVAYV K+LYDMGC EISLGDTIG+GTPG+V+PMLEAV+ VP DKLAVHFHDTYGQAL+NIL SLQ
Sbjct: 26 HTRKLSEGEHMFRNISFAGRTSTVSGTLRESKSFKEQKYSTFSNENGTSHISNKISKGIPKFVKIVEVGPRDGLQNEKNIVPTSVKVELIQRLVSSGLPVVEATSFVSPKWVPQLADAKDVMDAVNTLDGARLPVLTPNLKGFQAAVSAGAKEVAIFASASESFSLSNINCTIEESLLRYRVVATAAKEHSVPVRGYVSCVVGCPVEGPVLPSKVAYVVKELYDMGCFEISLGDTIGIGTPGSVVPMLEAVMAVVPADKLAVHFHDTYGQALANILVSLQ 305
BLAST of mi_v1.0.alternate_g18915.t1 vs. Araport11
Match: AT2G26800.1 (| Aldolase superfamily protein | Chr2:11429192-11432185 REVERSE LENGTH=433 | 201606) HSP 1 Score: 393.66 bits (1010), Expect = 2.766e-136 Identity = 196/280 (70.00%), Postives = 228/280 (81.43%), Query Frame = 0 Query: 46 YTREKKNSRKQVRNVS----CTNLNGYLSKAH------YSSSCTDNSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
+TR+ RN+S + ++G L ++ YS+ +N T +++K+ +P FVKIVEVGPRDGLQNEKNIVP VKVELI+ LVSSGLPVVEATSFVSPKWVPQLADAKDVM A+ ++GAR PVLTPNLKGF+AAV+AGAKEVAIFASASESFS SNINCTIE+SL+RYR VA AA+E S+PVRGY+SCVVGCPVEG V PSKVAYV K+LYDMGC EISLGDTIG+GTPG+V+PMLEAV+ VP DKLAVHFHDTYGQAL+NIL SLQ
Sbjct: 71 HTRKLSEGEHMFRNISFAGRTSTVSGTLRESKSFKEQKYSTFSNENGTSHISNKISKGIPKFVKIVEVGPRDGLQNEKNIVPTSVKVELIQRLVSSGLPVVEATSFVSPKWVPQLADAKDVMDAVNTLDGARLPVLTPNLKGFQAAVSAGAKEVAIFASASESFSLSNINCTIEESLLRYRVVATAAKEHSVPVRGYVSCVVGCPVEGPVLPSKVAYVVKELYDMGCFEISLGDTIGIGTPGSVVPMLEAVMAVVPADKLAVHFHDTYGQALANILVSLQ 350
BLAST of mi_v1.0.alternate_g18915.t1 vs. Araport11
Match: AT2G26800.4 (| Aldolase superfamily protein | Chr2:11429192-11432290 REVERSE LENGTH=468 | 201606) HSP 1 Score: 393.275 bits (1009), Expect = 1.286e-135 Identity = 196/280 (70.00%), Postives = 228/280 (81.43%), Query Frame = 0 Query: 46 YTREKKNSRKQVRNVS----CTNLNGYLSKAH------YSSSCTDNSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
+TR+ RN+S + ++G L ++ YS+ +N T +++K+ +P FVKIVEVGPRDGLQNEKNIVP VKVELI+ LVSSGLPVVEATSFVSPKWVPQLADAKDVM A+ ++GAR PVLTPNLKGF+AAV+AGAKEVAIFASASESFS SNINCTIE+SL+RYR VA AA+E S+PVRGY+SCVVGCPVEG V PSKVAYV K+LYDMGC EISLGDTIG+GTPG+V+PMLEAV+ VP DKLAVHFHDTYGQAL+NIL SLQ
Sbjct: 106 HTRKLSEGEHMFRNISFAGRTSTVSGTLRESKSFKEQKYSTFSNENGTSHISNKISKGIPKFVKIVEVGPRDGLQNEKNIVPTSVKVELIQRLVSSGLPVVEATSFVSPKWVPQLADAKDVMDAVNTLDGARLPVLTPNLKGFQAAVSAGAKEVAIFASASESFSLSNINCTIEESLLRYRVVATAAKEHSVPVRGYVSCVVGCPVEGPVLPSKVAYVVKELYDMGCFEISLGDTIGIGTPGSVVPMLEAVMAVVPADKLAVHFHDTYGQALANILVSLQ 385
BLAST of mi_v1.0.alternate_g18915.t1 vs. Araport11
Match: AT2G26800.2 (| Aldolase superfamily protein | Chr2:11429192-11432290 REVERSE LENGTH=468 | 201606) HSP 1 Score: 393.275 bits (1009), Expect = 1.286e-135 Identity = 196/280 (70.00%), Postives = 228/280 (81.43%), Query Frame = 0 Query: 46 YTREKKNSRKQVRNVS----CTNLNGYLSKAH------YSSSCTDNSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
+TR+ RN+S + ++G L ++ YS+ +N T +++K+ +P FVKIVEVGPRDGLQNEKNIVP VKVELI+ LVSSGLPVVEATSFVSPKWVPQLADAKDVM A+ ++GAR PVLTPNLKGF+AAV+AGAKEVAIFASASESFS SNINCTIE+SL+RYR VA AA+E S+PVRGY+SCVVGCPVEG V PSKVAYV K+LYDMGC EISLGDTIG+GTPG+V+PMLEAV+ VP DKLAVHFHDTYGQAL+NIL SLQ
Sbjct: 106 HTRKLSEGEHMFRNISFAGRTSTVSGTLRESKSFKEQKYSTFSNENGTSHISNKISKGIPKFVKIVEVGPRDGLQNEKNIVPTSVKVELIQRLVSSGLPVVEATSFVSPKWVPQLADAKDVMDAVNTLDGARLPVLTPNLKGFQAAVSAGAKEVAIFASASESFSLSNINCTIEESLLRYRVVATAAKEHSVPVRGYVSCVVGCPVEGPVLPSKVAYVVKELYDMGCFEISLGDTIGIGTPGSVVPMLEAVMAVVPADKLAVHFHDTYGQALANILVSLQ 385
BLAST of mi_v1.0.alternate_g18915.t1 vs. Araport11
Match: AT2G26800.3 (| Aldolase superfamily protein | Chr2:11429856-11432290 REVERSE LENGTH=355 | 201606) HSP 1 Score: 329.331 bits (843), Expect = 4.448e-112 Identity = 166/245 (67.76%), Postives = 195/245 (79.59%), Query Frame = 0 Query: 46 YTREKKNSRKQVRNVS----CTNLNGYLSKAH------YSSSCTDNSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVI 280
+TR+ RN+S + ++G L ++ YS+ +N T +++K+ +P FVKIVEVGPRDGLQNEKNIVP VKVELI+ LVSSGLPVVEATSFVSPKWVPQLADAKDVM A+ ++GAR PVLTPNLKGF+AAV+AGAKEVAIFASASESFS SNINCTIE+SL+RYR VA AA+E S+PVRGY+SCVVGCPVEG V PSKVAYV K+LYDMGC EISLGDTIG+GTPG +
Sbjct: 106 HTRKLSEGEHMFRNISFAGRTSTVSGTLRESKSFKEQKYSTFSNENGTSHISNKISKGIPKFVKIVEVGPRDGLQNEKNIVPTSVKVELIQRLVSSGLPVVEATSFVSPKWVPQLADAKDVMDAVNTLDGARLPVLTPNLKGFQAAVSAGAKEVAIFASASESFSLSNINCTIEESLLRYRVVATAAKEHSVPVRGYVSCVVGCPVEGPVLPSKVAYVVKELYDMGCFEISLGDTIGIGTPGNFV 350
BLAST of mi_v1.0.alternate_g18915.t1 vs. ExPASy Swiss-Prot
Match: HMGCL_ARATH (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HMGCL PE=1 SV=2) HSP 1 Score: 393.275 bits (1009), Expect = 1.257e-134 Identity = 196/280 (70.00%), Postives = 228/280 (81.43%), Query Frame = 0 Query: 46 YTREKKNSRKQVRNVS----CTNLNGYLSKAH------YSSSCTDNSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
+TR+ RN+S + ++G L ++ YS+ +N T +++K+ +P FVKIVEVGPRDGLQNEKNIVP VKVELI+ LVSSGLPVVEATSFVSPKWVPQLADAKDVM A+ ++GAR PVLTPNLKGF+AAV+AGAKEVAIFASASESFS SNINCTIE+SL+RYR VA AA+E S+PVRGY+SCVVGCPVEG V PSKVAYV K+LYDMGC EISLGDTIG+GTPG+V+PMLEAV+ VP DKLAVHFHDTYGQAL+NIL SLQ
Sbjct: 106 HTRKLSEGEHMFRNISFAGRTSTVSGTLRESKSFKEQKYSTFSNENGTSHISNKISKGIPKFVKIVEVGPRDGLQNEKNIVPTSVKVELIQRLVSSGLPVVEATSFVSPKWVPQLADAKDVMDAVNTLDGARLPVLTPNLKGFQAAVSAGAKEVAIFASASESFSLSNINCTIEESLLRYRVVATAAKEHSVPVRGYVSCVVGCPVEGPVLPSKVAYVVKELYDMGCFEISLGDTIGIGTPGSVVPMLEAVMAVVPADKLAVHFHDTYGQALANILVSLQ 385
BLAST of mi_v1.0.alternate_g18915.t1 vs. ExPASy Swiss-Prot
Match: HMGCL_BOVIN (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Bos taurus OX=9913 GN=HMGCL PE=2 SV=2) HSP 1 Score: 313.923 bits (803), Expect = 1.625e-105 Identity = 151/234 (64.53%), Postives = 183/234 (78.21%), Query Frame = 0 Query: 82 STKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
+ + +++ +G P VKIVEVGPRDGLQNEKNIVP VK++LI +L +GLPVVEATSFVSPKWVPQ+AD +V+ IQ G +PVLTPN KGF+AAVAAGAKEVAIF +ASE F+K NINC+I++SL R+ ++ AAR I VRGY+SCV+GCP EG + P+KVA V+K+LY MGC EISLGDTIGVGTPG + ML AVL VPV LAVH HDTYGQAL+N L +LQ
Sbjct: 17 TLRAVSTSSVGTFPKQVKIVEVGPRDGLQNEKNIVPTPVKIKLIDMLSEAGLPVVEATSFVSPKWVPQMADHAEVLKGIQKFPGVNYPVLTPNFKGFQAAVAAGAKEVAIFGAASELFTKKNINCSIDESLQRFDEILKAARAAGISVRGYVSCVLGCPYEGKISPAKVAEVTKKLYSMGCYEISLGDTIGVGTPGAMKDMLSAVLQEVPVTALAVHCHDTYGQALANTLTALQ 250
BLAST of mi_v1.0.alternate_g18915.t1 vs. ExPASy Swiss-Prot
Match: HMGCL_RAT (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hmgcl PE=2 SV=1) HSP 1 Score: 310.457 bits (794), Expect = 4.868e-104 Identity = 150/234 (64.10%), Postives = 181/234 (77.35%), Query Frame = 0 Query: 82 STKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
S + ++ +G +P VKIVEVGPRDGLQNEK+IVP VK++LI +L +GLPV+EATSFVSPKWVPQ+AD DV+ IQ G +PVLTPN+KGFE AVAAGAKEV+IF +ASE F++ N+NC+IE+S R+ V AAR SI VRGY+SC +GCP EG V P+KVA V+K+LY MGC EISLGDTIGVGTPG + ML AVL VPV LAVH HDTYGQAL+N L +LQ
Sbjct: 17 SLRAASTSSMGTLPKRVKIVEVGPRDGLQNEKSIVPTPVKIKLIDMLSEAGLPVIEATSFVSPKWVPQMADHSDVLKGIQKFPGINYPVLTPNMKGFEEAVAAGAKEVSIFGAASELFTRKNVNCSIEESFQRFDGVMQAARAASISVRGYVSCALGCPYEGKVSPAKVAEVAKKLYSMGCYEISLGDTIGVGTPGLMKDMLTAVLHEVPVAALAVHCHDTYGQALANTLVALQ 250
BLAST of mi_v1.0.alternate_g18915.t1 vs. ExPASy Swiss-Prot
Match: HMGCL_CHICK (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Gallus gallus OX=9031 GN=HMGCL PE=1 SV=1) HSP 1 Score: 307.76 bits (787), Expect = 2.142e-103 Identity = 146/221 (66.06%), Postives = 178/221 (80.54%), Query Frame = 0 Query: 95 PGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
P VK+VEVGPRDGLQNEK++VP VK+ LI +L +GLPV+EATSFVSP+WVPQ+AD +VM I + G +PVLTPNLKGF+AAVAAGAKEV+IF +ASE F+K NINC+IE+SL R+ +V AAR SIPVRGY+SCV+GCP EG + +KVA VSK++Y MGC EISLGD IG+GTPG++ ML AV+ VPV LAVH HDTYGQAL+NIL +LQ
Sbjct: 3 PQRVKVVEVGPRDGLQNEKSVVPTPVKIRLIDMLSETGLPVIEATSFVSPRWVPQMADHAEVMQGINKLPGVSYPVLTPNLKGFQAAVAAGAKEVSIFGAASELFTKKNINCSIEESLERFSEVMNAARAASIPVRGYVSCVLGCPYEGNISAAKVAEVSKKMYSMGCYEISLGDRIGIGTPGSMKEMLAAVMKEVPVGALAVHCHDTYGQALANILVALQ 223
BLAST of mi_v1.0.alternate_g18915.t1 vs. ExPASy Swiss-Prot
Match: HMGCL_MOUSE (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Mus musculus OX=10090 GN=Hmgcl PE=1 SV=2) HSP 1 Score: 305.064 bits (780), Expect = 5.446e-102 Identity = 146/235 (62.13%), Postives = 179/235 (76.17%), Query Frame = 0 Query: 81 NSTKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
S + +++ +G +P VKIVEVGPRDGLQNEK+IVP VK+ LI +L +GLPV+EATSFVSPKWVPQ+AD DV+ IQ G +PVLTPN+KGFE AVAAGAKEV++F + SE F++ N NC+IE+S R+ V AA+ SI VRGY+SC +GCP EG V P+KVA V+K+LY MGC EISLGDTIGVGTPG + ML AV+ VPV LAVH HDTYGQAL+N L +LQ
Sbjct: 16 TSLRAVSTSSMGTLPKQVKIVEVGPRDGLQNEKSIVPTPVKIRLIDMLSEAGLPVIEATSFVSPKWVPQMADHSDVLKGIQKFPGINYPVLTPNMKGFEEAVAAGAKEVSVFGAVSELFTRKNANCSIEESFQRFAGVMQAAQAASISVRGYVSCALGCPYEGKVSPAKVAEVAKKLYSMGCYEISLGDTIGVGTPGLMKDMLTAVMHEVPVTALAVHCHDTYGQALANTLVALQ 250
BLAST of mi_v1.0.alternate_g18915.t1 vs. ExPASy Swiss-Prot
Match: HMGC2_MOUSE (3-hydroxy-3-methylglutaryl-CoA lyase, cytoplasmic OS=Mus musculus OX=10090 GN=Hmgcll1 PE=2 SV=1) HSP 1 Score: 304.294 bits (778), Expect = 2.190e-101 Identity = 144/228 (63.16%), Postives = 180/228 (78.95%), Query Frame = 0 Query: 88 SKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
S+L G +P +VKIVEVGPRDGLQNEK IVP +K+ELI L +GL V+E TSFVS +WVPQ+AD +VM I+ G R+PVLTPNL+GF+ AVAAGA E+A+F +ASESFSK NINC+IE+S+ R+++V +AR + IPVRGY+SC +GCP EG + P KV VSK+LY MGC EISLGDTIGVGTPG++ MLE+V+ +P LAVH HDTYGQAL+NIL +LQ
Sbjct: 39 SQLPG-LPEYVKIVEVGPRDGLQNEKVIVPTDIKIELINQLSQTGLSVIEVTSFVSSRWVPQMADHAEVMRGIRQYPGVRYPVLTPNLQGFQHAVAAGATEIAVFGAASESFSKKNINCSIEESMGRFQEVISSARHMDIPVRGYVSCALGCPYEGSITPQKVTEVSKRLYGMGCYEISLGDTIGVGTPGSMKMMLESVMKEIPPGALAVHCHDTYGQALANILTALQ 265
BLAST of mi_v1.0.alternate_g18915.t1 vs. ExPASy Swiss-Prot
Match: HMGCL_PONAB (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Pongo abelii OX=9601 GN=HMGCL PE=2 SV=1) HSP 1 Score: 302.368 bits (773), Expect = 6.525e-101 Identity = 145/234 (61.97%), Postives = 179/234 (76.50%), Query Frame = 0 Query: 82 STKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
S + +++ +G +P VKIVEVGPRDGLQNEKNIV VK++LI +L +GL V+E TSFVSPKWVPQ+ D +V+ IQ G +PVLTPNLKGFEAAVAAGAKEVAIF +ASE F+K NINC+IE+S R+ + AA+ +I VRGY+SC +GCP EG + P+KVA V+K+LY MGC EISLGDTIGVGTPG + ML AV+ VP+ LAVH HDTYGQAL+N L +LQ
Sbjct: 17 SLRAVSTSSMGTLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVAIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKLYSMGCYEISLGDTIGVGTPGIMKGMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQ 250
BLAST of mi_v1.0.alternate_g18915.t1 vs. ExPASy Swiss-Prot
Match: HMGC2_HUMAN (3-hydroxy-3-methylglutaryl-CoA lyase, cytoplasmic OS=Homo sapiens OX=9606 GN=HMGCLL1 PE=1 SV=3) HSP 1 Score: 301.982 bits (772), Expect = 4.197e-100 Identity = 142/229 (62.01%), Postives = 177/229 (77.29%), Query Frame = 0 Query: 87 TSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
TS+L G +P FVKIVEVGPRDGLQNEK IVP +K+E I L +GL V+E TSFVS +WVPQ+AD +VM I G R+PVLTPNL+GF AVAAGA E+++F +ASESFSK NINC+IE+S+ ++ +V +AR ++IP RGY+SC +GCP EG + P KV VSK+LY MGC EISLGDTIGVGTPG++ MLE+V+ +P LAVH HDTYGQAL+NIL +LQ
Sbjct: 68 TSQLSG-LPEFVKIVEVGPRDGLQNEKVIVPTDIKIEFINRLSQTGLSVIEVTSFVSSRWVPQMADHTEVMKGIHQYPGVRYPVLTPNLQGFHHAVAAGATEISVFGAASESFSKKNINCSIEESMGKFEEVVKSARHMNIPARGYVSCALGCPYEGSITPQKVTEVSKRLYGMGCYEISLGDTIGVGTPGSMKRMLESVMKEIPPGALAVHCHDTYGQALANILTALQ 295
BLAST of mi_v1.0.alternate_g18915.t1 vs. ExPASy Swiss-Prot
Match: HMGCL_HUMAN (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Homo sapiens OX=9606 GN=HMGCL PE=1 SV=2) HSP 1 Score: 298.901 bits (764), Expect = 1.438e-99 Identity = 143/234 (61.11%), Postives = 177/234 (75.64%), Query Frame = 0 Query: 82 STKDLTSKLLGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
S + +++ +G +P VKIVEVGPRDGLQNEKNIV VK++LI +L +GL V+E TSFVSPKWVPQ+ D +V+ IQ G +PVLTPNLKGFEAAVAAGAKEV IF +ASE F+K NINC+IE+S R+ + AA+ +I VRGY+SC +GCP EG + P+KVA V+K+ Y MGC EISLGDTIGVGTPG + ML AV+ VP+ LAVH HDTYGQAL+N L +LQ
Sbjct: 17 SLRAVSTSSMGTLPKRVKIVEVGPRDGLQNEKNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQ 250
BLAST of mi_v1.0.alternate_g18915.t1 vs. ExPASy Swiss-Prot
Match: HMGC2_RAT (3-hydroxy-3-methylglutaryl-CoA lyase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Hmgcll1 PE=1 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 4.067e-99 Identity = 138/225 (61.33%), Postives = 172/225 (76.44%), Query Frame = 0 Query: 91 LGRVPGFVKIVEVGPRDGLQNEKNIVPAVVKVELIKLLVSSGLPVVEATSFVSPKWVPQLADAKDVMAAIQNVEGARFPVLTPNLKGFEAAVAAGAKEVAIFASASESFSKSNINCTIEDSLIRYRDVALAARELSIPVRGYLSCVVGCPVEGMVPPSKVAYVSKQLYDMGCSEISLGDTIGVGTPGTVIPMLEAVLDAVPVDKLAVHFHDTYGQALSNILASLQ 315
L +P +VKIVEVGPRDGLQNEK IVP +K+E I L +GL V+E TSFVS +WVPQ+AD +VM I G R+PVL PNL+G + AVAAGA E+A+F +ASESFSK NINC+IE+S+ R+ V +AR ++IPVRGY+SC +GCP EG + P KV VSK+LY MGC EISLGDT+GVGTPG++ MLE+V+ +P LAVH HDTYGQAL+NIL +LQ
Sbjct: 41 LSGLPEYVKIVEVGPRDGLQNEKVIVPTDIKIEFINQLSQTGLSVIEVTSFVSSRWVPQMADHAEVMGGIHQYPGVRYPVLVPNLQGLQHAVAAGATEIAVFGAASESFSKKNINCSIEESMGRFEQVISSARHMNIPVRGYVSCALGCPYEGSIMPQKVTEVSKRLYSMGCYEISLGDTVGVGTPGSMKTMLESVMKEIPPGALAVHCHDTYGQALANILTALQ 265 The following BLAST results are available for this feature:
BLAST of mi_v1.0.alternate_g18915.t1 vs. ExPASy TrEMBL
Analysis Date: 2024-01-19 (Blastp of Citrus inodora CRC3784 v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of mi_v1.0.alternate_g18915.t1 vs. Araport11
Analysis Date: 2024-01-19 (Blastp of Citrus inodora CRC3784 v1.0 proteins vs Araport11) Total hits: 5 Position : 0 Zoom : x 1
BLAST of mi_v1.0.alternate_g18915.t1 vs. ExPASy Swiss-Prot
Analysis Date: 2024-01-19 (Blastp of Citrus inodora CRC3784 v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus inodora CRC3784 v1.0 v1.0 proteins
Date Performed: 2024-01-19 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >mi_v1.0.alternate_g18915.t1-ucr_v1 ID=mi_v1.0.alternate_g18915.t1-ucr_v1; Name=mi_v1.0.alternate_g18915.t1; organism=Citrus inodora; type=mRNA; length=1197bpback to top protein sequence of mi_v1.0.alternate_g18915.t1-ucr_v1 >mi_v1.0.alternate_g18915.t1-ucr_v1 ID=mi_v1.0.alternate_g18915.t1-ucr_v1; Name=mi_v1.0.alternate_g18915.t1-ucr_v1; organism=Citrus inodora; type=polypeptide; length=315bpback to top mRNA from alignment at Alt_Scaffold_6:22485789..22489261+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=3473bp; location=Sequence derived from: Alt_Scaffold_6:22485789..22489261+ (Citrus inodoraback to top Coding sequence (CDS) from alignment at Alt_Scaffold_6:22485789..22489261+ >mi_v1.0.alternate_g18915.t1-ucr_v1 ID=mi_v1.0.alternate_g18915.t1-ucr_v1; Name=mi_v1.0.alternate_g18915.t1; organism=Citrus inodora; type=CDS; length=948bp; location=Sequence derived from: Alt_Scaffold_6:22485789..22489261+ (Citrus inodoraback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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