mi_v1.0.alternate_g25042.t1 | Citrus Genome Database

Transcript Overview


Name	mi_v1.0.alternate_g25042.t1
Unique Name	mi_v1.0.alternate_g25042.t1-ucr_v1
Type	mRNA
Organism	Citrus inodora (Australian wild lime)
Sequence length	549

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Citrus inodora CRC3784 genome v1.0	2023-05-24
Blastp of Citrus inodora CRC3784 v1.0 proteins vs UniProt TrEMBL	2024-01-19
InterProScan Analysis for Citrus inodora CRC3784 v1.0 v1.0 proteins	2024-01-19
Blastp of Citrus inodora CRC3784 v1.0 proteins vs Araport11	2024-01-19
Blastp of Citrus inodora CRC3784 v1.0 proteins vs UniProt Swissprot	2024-01-19

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
fhminL1027	Fortunella hindsii genome v1.0	Fortunella hindsii
minminL535	Citrus inodora CRC3784 genome v1.0	Citrus inodora
minzkR1214	Poncirus trifoliata acc. ZK8 v1.0 (HZAU)	Poncirus trifoliata
minzkR1224	Poncirus trifoliata acc. ZK8 v1.0 (HZAU)	Poncirus trifoliata
eglminL1491	Citrus glauca CRC3463 genome v1	Citrus glauca
eglminL1513	Citrus glauca CRC3463 genome v1	Citrus glauca
csminL0544	Citrus sinensis genome v1.1 (JGI)	Citrus sinensis
dvaminL622	Citrus sinensis cv. Valencia DVS_A genome v1.0	Citrus sinensis
cmminL0958	Citrus maxima (C. grandis) genome v1.0	Citrus maxima
dvbminL628	Citrus sinensis cv. Valencia DVS_B genome v1.0	Citrus sinensis
dvaminL795	Citrus sinensis cv. Valencia DVS_A genome v1.0	Citrus sinensis
dvbminL810	Citrus sinensis cv. Valencia DVS_B genome v1.0	Citrus sinensis
eglminL3109	Citrus glauca CRC3463 genome v1	Citrus glauca
ccminL371	Citrus clementina genome v1.0 (JGI)	Citrus clementina
cmjminL0803	Citrus maxima Cupi Majiayou v1.0 genome	Citrus maxima
ccminL539	Citrus clementina genome v1.0 (JGI)	Citrus clementina
cleminL0368	Citrus limon cv. Eureka genome v1.0	Citrus limon
cmjminL0984	Citrus maxima Cupi Majiayou v1.0 genome	Citrus maxima
cauminL671	Citrus australis genome v1.0 (UQ)	Citrus australis
cleminL0432	Citrus limon cv. Eureka genome v1.0	Citrus limon
cauminL856	Citrus australis genome v1.0 (UQ)	Citrus australis
cleminL0748	Citrus limon cv. Eureka genome v1.0	Citrus limon
ccrminL0858	Citrus australasica CRC3672 genome v1	Citrus australasica
cleminL0856	Citrus limon cv. Eureka genome v1.0	Citrus limon
ccrminL1730	Citrus australasica CRC3672 genome v1	Citrus australasica

Orthologs


Gene/Transcript	Assembly	Species
Cg8g023830.1	Citrus maxima (C. grandis) genome v1.0	Citrus maxima
NM_gene58194.t1	Citrus limon cv. Eureka genome v1.0	Citrus limon
orange1.1g030121m.v1.1	Citrus sinensis genome v1.1 (JGI)	Citrus sinensis
g2653.t1	Citrus australis genome v1.0 (UQ)	Citrus australis
sjg253770.1	Fortunella hindsii genome v1.0	Fortunella hindsii
Pt8g011630.1	Poncirus trifoliata acc. ZK8 v1.0 (HZAU)	Poncirus trifoliata
Cau_v1.primary_g24690.t1	Citrus australasica CRC3672 genome v1	Citrus australasica
Cau_v1.alternate_g22955.t1	Citrus australasica CRC3672 genome v1	Citrus australasica
eg_v1.0.alternate_g31417.t1	Citrus glauca CRC3463 genome v1	Citrus glauca
gene-KPL70_024647-mRNA1	Citrus sinensis cv. Valencia DVS_A genome v1.0	Citrus sinensis
Ciclev10029368m	Citrus clementina genome v1.0 (JGI)	Citrus clementina
CMJ_chr8_001180.1	Citrus maxima Cupi Majiayou v1.0 genome	Citrus maxima
gene-KPL71_025074-mRNA1	Citrus sinensis cv. Valencia DVS_B genome v1.0	Citrus sinensis
NM_gene54731.t1	Citrus limon cv. Eureka genome v1.0	Citrus limon

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
mi_v1.0.alternate_g25042	mi_v1.0.alternate_g25042-ucr_v1	Citrus inodora	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
mi_v1.0.alternate_g25042.t1.exon1	mi_v1.0.alternate_g25042.t1.exon.1-ucr_v1	Citrus inodora	exon
mi_v1.0.alternate_g25042.t1.exon2	mi_v1.0.alternate_g25042.t1.exon.2-ucr_v1	Citrus inodora	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
cds.mi_v1.0.alternate_g25042.t1	mi_v1.0.alternate_g25042.t1.cds.1-ucr_v1	Citrus inodora	CDS
cds.mi_v1.0.alternate_g25042.t1	mi_v1.0.alternate_g25042.t1.cds.2-ucr_v1	Citrus inodora	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
mi_v1.0.alternate_g25042.t1-ucr_v1	mi_v1.0.alternate_g25042.t1-ucr_v1	Citrus inodora	polypeptide
mi_v1.0.alternate_g25042.t1-ucr_v1	mi_v1.0.alternate_g25042.t1-ucr_v1-protein	Citrus inodora	polypeptide

Homology

[Close]

BLAST of mi_v1.0.alternate_g25042.t1 vs. ExPASy TrEMBL
Match: A0A2H5NCT7|A0A2H5NCT7_CITUN (Ubiquitinyl hydrolase 1 OS=Citrus unshiu OX=55188 GN=CUMW_032570 PE=4 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 5.421e-132
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0

Query:    1 MASENCKIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNALTGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGENSLMGIVINVPVTRYAGLWKSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLDYIIGIGGEVLLVKNDKE 182
            MASENCKIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNALTGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGEN LMGIVINVPVTRYAGLWKSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLDYIIG+GGEVLLVKNDKE
Sbjct:    1 MASENCKIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNALTGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGENCLMGIVINVPVTRYAGLWKSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLDYIIGLGGEVLLVKNDKE 182

[Close]

BLAST of mi_v1.0.alternate_g25042.t1 vs. ExPASy TrEMBL
Match: V4SMJ0|V4SMJ0_CITCL (Ubiquitinyl hydrolase 1 OS=Citrus clementina OX=85681 GN=CICLE_v10029368mg PE=4 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 5.421e-132
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0

Query:    1 MASENCKIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNALTGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGENSLMGIVINVPVTRYAGLWKSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLDYIIGIGGEVLLVKNDKE 182
            MASENCKIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNALTGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGEN LMGIVINVPVTRYAGLWKSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLDYIIG+GGEVLLVKNDKE
Sbjct:    1 MASENCKIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNALTGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGENCLMGIVINVPVTRYAGLWKSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLDYIIGLGGEVLLVKNDKE 182

[Close]

BLAST of mi_v1.0.alternate_g25042.t1 vs. ExPASy TrEMBL
Match: A0A067FHK4|A0A067FHK4_CITSI (Ubiquitinyl hydrolase 1 OS=Citrus sinensis OX=2711 GN=CISIN_1g030121mg PE=4 SV=1)

HSP 1 Score: 376.326 bits (965), Expect = 5.421e-132
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 0

Query:    1 MASENCKIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNALTGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGENSLMGIVINVPVTRYAGLWKSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLDYIIGIGGEVLLVKNDKE 182
            MASENCKIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNALTGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGEN LMGIVINVPVTRYAGLWKSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLDYIIG+GGEVLLVKNDKE
Sbjct:    1 MASENCKIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNALTGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGENCLMGIVINVPVTRYAGLWKSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLDYIIGLGGEVLLVKNDKE 182

[Close]

BLAST of mi_v1.0.alternate_g25042.t1 vs. ExPASy TrEMBL
Match: A0A5C7IYS0|A0A5C7IYS0_9ROSI (Ubiquitinyl hydrolase 1 OS=Acer yangbiense OX=1000413 GN=EZV62_002950 PE=4 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 3.137e-110
Identity = 153/183 (83.61%), Postives = 169/183 (92.35%), Query Frame = 0

Query:    1 MASENCKIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNALTGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGE-NSLMGIVINVPVTRYAGLWKSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLDYIIGIGGEVLLVKNDKE 182
            MASE   IYHERQKLQFCLLHSLNNLFQQ+ AFTRASLNEIAEKLVLD P+KQTWTPLSVVFKPHHN+LTGNYDINVLIAALEGRGK+VVWHD RNEA+ IDLDGG+ +SLMGIVINVPVTRYAG+WK RHW+ LRKIDG+WYNLDSDF +P  F+DS+EVREFLD+II +GGEVLLVK+DKE
Sbjct:    1 MASEKTAIYHERQKLQFCLLHSLNNLFQQKDAFTRASLNEIAEKLVLDDPDKQTWTPLSVVFKPHHNSLTGNYDINVLIAALEGRGKAVVWHDHRNEAATIDLDGGDSSSLMGIVINVPVTRYAGIWKGRHWITLRKIDGIWYNLDSDFKSPCSFEDSEEVREFLDHIIVLGGEVLLVKDDKE 183

[Close]

BLAST of mi_v1.0.alternate_g25042.t1 vs. ExPASy TrEMBL
Match: A0A6P3Z9G3|A0A6P3Z9G3_ZIZJJ (Ubiquitinyl hydrolase 1 OS=Ziziphus jujuba OX=326968 GN=LOC107410858 PE=4 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 2.549e-104
Identity = 139/180 (77.22%), Postives = 163/180 (90.56%), Query Frame = 0

Query:    1 MASENCKIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNALTGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGENSLMGIVINVPVTRYAGLWKSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLDYIIGIGGEVLLVKND 180
            MA+EN +IYHERQ+LQFCLLHSLNNLFQQE AFTRASLNEIA+KLV+D  +K+TWTPLS++FKPHHN +TGNYDINVLI+ALEG+GKSV+WHDRRN AS+IDLDG E+ LMGIV+NVPV RY GLW+SRHWV LR+IDG+WYNLDSD   PQ FKD++EV++FLDYIIG GGE+LLV ND
Sbjct:    1 MANENTQIYHERQRLQFCLLHSLNNLFQQENAFTRASLNEIADKLVVDDTDKETWTPLSILFKPHHNTITGNYDINVLISALEGKGKSVIWHDRRNGASSIDLDGPEDGLMGIVLNVPVRRYGGLWRSRHWVTLRRIDGMWYNLDSDLAVPQAFKDTEEVKKFLDYIIGNGGEILLVMND 180

[Close]

BLAST of mi_v1.0.alternate_g25042.t1 vs. ExPASy TrEMBL
Match: A0A314UAZ2|A0A314UAZ2_PRUYE (Ubiquitinyl hydrolase 1 OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_00447 PE=4 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 4.877e-104
Identity = 144/183 (78.69%), Postives = 167/183 (91.26%), Query Frame = 0

Query:    1 MASE-NCKIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNALTGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGENSLMGIVINVPVTRYAGLWKSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLDYIIGIGGEVLLVKNDKE 182
            MA++ N +IYHERQ+LQFCLLHSLNNLFQQ+  FTR+SLNEIAEKLVL+ PN +TWTPLSV+FKPHHNALTGNYDINVLIAALE +GK+VVWHDRRN AS+IDLDG E++LMGI++NVPV  +AGLWKSRHWVALRKIDGVWYNLDSD  APQ F+D+++VREFLDYIIG GGEVLLV N+K+
Sbjct:    1 MATDTNTQIYHERQRLQFCLLHSLNNLFQQKDVFTRSSLNEIAEKLVLEEPNNETWTPLSVLFKPHHNALTGNYDINVLIAALEDKGKNVVWHDRRNGASSIDLDGPEDALMGILLNVPVRMFAGLWKSRHWVALRKIDGVWYNLDSDLVAPQAFEDTEKVREFLDYIIGYGGEVLLVMNNKQ 183

[Close]

BLAST of mi_v1.0.alternate_g25042.t1 vs. ExPASy TrEMBL
Match: A0A5E4FX03|A0A5E4FX03_PRUDU (Ubiquitinyl hydrolase 1 OS=Prunus dulcis OX=3755 GN=ALMOND_2B002557 PE=4 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 3.112e-103
Identity = 143/183 (78.14%), Postives = 167/183 (91.26%), Query Frame = 0

Query:    1 MASE-NCKIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNALTGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGENSLMGIVINVPVTRYAGLWKSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLDYIIGIGGEVLLVKNDKE 182
            MA++ N +IYHERQ+LQFCLLHSLNNLFQQ+  FTR+SLNEIAEKLVL+ PN +TWTPLSV+FKPHHNALTGNYDINVLIAALE +GK+VVWHDRRN AS+IDLDG E++LMGI++NVPV  +AGLWKSRHWV+LRKIDGVWYNLDSD  APQ F+D+++VREFLDYIIG GGEVLLV N+K+
Sbjct:    1 MATDTNTQIYHERQRLQFCLLHSLNNLFQQKDVFTRSSLNEIAEKLVLEEPNNETWTPLSVLFKPHHNALTGNYDINVLIAALEDKGKNVVWHDRRNGASSIDLDGPEDALMGILLNVPVRMFAGLWKSRHWVSLRKIDGVWYNLDSDLVAPQAFEDTEKVREFLDYIIGHGGEVLLVMNNKQ 183

[Close]

BLAST of mi_v1.0.alternate_g25042.t1 vs. ExPASy TrEMBL
Match: M5WK40|M5WK40_PRUPE (Ubiquitinyl hydrolase 1 OS=Prunus persica OX=3760 GN=PRUPE_6G060500 PE=4 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 4.986e-103
Identity = 142/183 (77.60%), Postives = 167/183 (91.26%), Query Frame = 0

Query:    1 MASE-NCKIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNALTGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGENSLMGIVINVPVTRYAGLWKSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLDYIIGIGGEVLLVKNDKE 182
            MA++ N ++YHERQ+LQFCLLHSLNNLFQQ+  FTR+SLNEIAEKLVL+ PN +TWTPLSV+FKPHHNALTGNYDINVLIAALE +GK+VVWHDRRN AS+IDLDG E++LMGI++NVPV  +AGLWKSRHWV+LRKIDGVWYNLDSD  APQ F+D+++VREFLDYIIG GGEVLLV N+K+
Sbjct:    1 MATDTNTQVYHERQRLQFCLLHSLNNLFQQKDVFTRSSLNEIAEKLVLEEPNNETWTPLSVLFKPHHNALTGNYDINVLIAALEDKGKNVVWHDRRNGASSIDLDGPEDALMGILLNVPVRMFAGLWKSRHWVSLRKIDGVWYNLDSDLVAPQAFEDTEKVREFLDYIIGHGGEVLLVMNNKQ 183

[Close]

BLAST of mi_v1.0.alternate_g25042.t1 vs. ExPASy TrEMBL
Match: A0A6P5SJS4|A0A6P5SJS4_PRUAV (Ubiquitinyl hydrolase 1 OS=Prunus avium OX=42229 GN=LOC110758706 PE=4 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.098e-102
Identity = 142/183 (77.60%), Postives = 166/183 (90.71%), Query Frame = 0

Query:    1 MASE-NCKIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNALTGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGENSLMGIVINVPVTRYAGLWKSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLDYIIGIGGEVLLVKNDKE 182
            MA++ N +IYHERQ+LQFCLLHSLNNLFQ++  FTR+SLNEIAEKLVL+ PN +TWTP SV+FKPHHNALTGNYDINVLIAALE +GK+VVWHDRRN AS+IDLDG E++LMGI++NVPV  +AGLWKSRHWVALRKIDGVWYNLDSD  APQ F+D+++VREFLDYIIG GGEVLLV N+K+
Sbjct:    1 MATDTNTQIYHERQRLQFCLLHSLNNLFQRKDVFTRSSLNEIAEKLVLEEPNNETWTPFSVLFKPHHNALTGNYDINVLIAALEDKGKNVVWHDRRNGASSIDLDGPEDALMGILLNVPVRMFAGLWKSRHWVALRKIDGVWYNLDSDLVAPQAFEDTEKVREFLDYIIGYGGEVLLVMNNKQ 183

[Close]

BLAST of mi_v1.0.alternate_g25042.t1 vs. ExPASy TrEMBL
Match: A0A6J5V070|A0A6J5V070_PRUAR (Ubiquitinyl hydrolase 1 OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS35696 PE=4 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.352e-102
Identity = 142/183 (77.60%), Postives = 167/183 (91.26%), Query Frame = 0

Query:    1 MASE-NCKIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNALTGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGENSLMGIVINVPVTRYAGLWKSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLDYIIGIGGEVLLVKNDKE 182
            MA++ N +IYHE+Q+LQFCLLHSLNNLFQQ+  FTR+SLNEIAEKLVL+ PN +TWTPLSV+FKPHHNALTGNYDINVLIAALE +GK+VVWHDRRN AS+IDLDG E++LMGI++NVPV  +AGLWKSRHWV+LRKIDGVWYNLDSD  APQ F+D+++VREFLDYIIG GGEVLLV N+K+
Sbjct:    1 MATDTNTQIYHEQQRLQFCLLHSLNNLFQQKDVFTRSSLNEIAEKLVLEEPNNETWTPLSVLFKPHHNALTGNYDINVLIAALEDKGKNVVWHDRRNGASSIDLDGPEDALMGILLNVPVRMFAGLWKSRHWVSLRKIDGVWYNLDSDLVAPQAFEDTEKVREFLDYIIGHGGEVLLVMNNKQ 183

[Close]

BLAST of mi_v1.0.alternate_g25042.t1 vs. Araport11
Match: AT2G29640.1 (| JOSEPHIN-like protein | Chr2:12671206-12673300 FORWARD LENGTH=360 | 201606)

HSP 1 Score: 250.751 bits (639), Expect = 2.341e-83
Identity = 116/165 (70.30%), Postives = 134/165 (81.21%), Query Frame = 0

Query:    1 MASENCKIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNALTGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGENSLMGIVINVPVTRYAGLWKSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLD 165
            MA    KIYHERQ+LQFCLLH LNNLFQ + AFT+ SLN IAEKL  + PNK+TWTPLS V KPHHN +TGNYD+NV+I ALEG+GKSVVWHD+R  AS+IDLD  + +LMGIV+NVPV RY GLW+SRHWV +RKI+GVWYNLDSD   PQ F+D  EVR FLD
Sbjct:    1 MADSESKIYHERQRLQFCLLHCLNNLFQDKDAFTKESLNSIAEKLETNDPNKETWTPLSFVLKPHHNTITGNYDVNVMITALEGKGKSVVWHDKRIGASSIDLDDAD-TLMGIVLNVPVKRYGGLWRSRHWVVVRKINGVWYNLDSDLVVPQLFRDDDEVRGFLD 164

[Close]

BLAST of mi_v1.0.alternate_g25042.t1 vs. ExPASy Swiss-Prot
Match: JOSL_ARATH (Josephin-like protein OS=Arabidopsis thaliana OX=3702 GN=At2g29640 PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 2.288e-82
Identity = 116/165 (70.30%), Postives = 134/165 (81.21%), Query Frame = 0

Query:    1 MASENCKIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNALTGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGENSLMGIVINVPVTRYAGLWKSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLD 165
            MA    KIYHERQ+LQFCLLH LNNLFQ + AFT+ SLN IAEKL  + PNK+TWTPLS V KPHHN +TGNYD+NV+I ALEG+GKSVVWHD+R  AS+IDLD  + +LMGIV+NVPV RY GLW+SRHWV +RKI+GVWYNLDSD   PQ F+D  EVR FLD
Sbjct:    1 MADSESKIYHERQRLQFCLLHCLNNLFQDKDAFTKESLNSIAEKLETNDPNKETWTPLSFVLKPHHNTITGNYDVNVMITALEGKGKSVVWHDKRIGASSIDLDDAD-TLMGIVLNVPVKRYGGLWRSRHWVVVRKINGVWYNLDSDLVVPQLFRDDDEVRGFLD 164

[Close]

BLAST of mi_v1.0.alternate_g25042.t1 vs. ExPASy Swiss-Prot
Match: JOS2_HUMAN (Josephin-2 OS=Homo sapiens OX=9606 GN=JOSD2 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.135e-37
Identity = 73/176 (41.48%), Postives = 105/176 (59.66%), Query Frame = 0

Query:    8 IYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNAL-TGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGENSLMGIVINVPVTRYAGLW----KSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLDYIIGIG-GEVLLV 177
            +YHERQ+L+ C +H+LNN+ QQ+  F++ + +EI ++L  D               PH + L TGNYD+NV++AAL+G G + VW DRR   S + L      ++G+++N+P     GL     + RHWVALR++DGV+YNLDS   AP+   D   VR FL   +  G  EVLLV
Sbjct:   14 VYHERQRLELCAVHALNNVLQQQ-LFSQEAADEICKRLAPDS-----------RLNPHRSLLGTGNYDVNVIMAALQGLGLAAVWWDRRRPLSQLALP----QVLGLILNLPSPVSLGLLSLPLRRRHWVALRQVDGVYYNLDSKLRAPEALGDEDGVRAFLAAALAQGLCEVLLV 173

[Close]

BLAST of mi_v1.0.alternate_g25042.t1 vs. ExPASy Swiss-Prot
Match: JOS2_MOUSE (Josephin-2 OS=Mus musculus OX=10090 GN=Josd2 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 7.558e-37
Identity = 71/177 (40.11%), Postives = 105/177 (59.32%), Query Frame = 0

Query:    7 KIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNAL-TGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGENSLMGIVINVPVTRYAGLW----KSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLDYIIGIG-GEVLLV 177
             +YHERQ+L+ C +H+LNN+ Q++  F++ + +EI ++L  D               PH + L TGNYD+NV++AAL+G G + VW DRR   S + L      ++G+++N+P     GL     + RHWVALR++DG++YNLDS   AP+   D   VR FL   +  G  EVLLV
Sbjct:   13 SVYHERQRLELCAVHALNNVLQEQ-LFSQEAADEICKRLAPDS-----------RLNPHRSLLGTGNYDVNVIMAALQGLGLAAVWWDRRRPLSQLALP----QVLGLILNLPSPVSLGLLSLPLRRRHWVALRQVDGIYYNLDSKLRAPEALGDEDGVRTFLAAALAQGLCEVLLV 173

[Close]

BLAST of mi_v1.0.alternate_g25042.t1 vs. ExPASy Swiss-Prot
Match: JOS1_RAT (Josephin-1 OS=Rattus norvegicus OX=10116 GN=Josd1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 9.846e-34
Identity = 68/178 (38.20%), Postives = 103/178 (57.87%), Query Frame = 0

Query:    7 KIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNAL--TGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGENSLMGIVINVPVTRYAG----LWKSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLDY-IIGIGGEVLLV 177
            +IYHE+Q+ + C LH+LNN+FQ   AFTR +L EI ++L    PN         V  PH  ++   GNYD+NV++AAL+ +G   VW D+R +   I L     ++MG ++N+P +   G      K +HW+ +R++ G +YNLDS    P+      E+R+FL Y + G   E+LLV
Sbjct:   25 QIYHEKQRRELCALHALNNVFQDSNAFTRETLQEIFQRL---SPN--------TVVTPHKKSMLGNGNYDVNVIMAALQTKGYEAVWWDKRRDVGVIALA----NVMGFIMNLPSSLCWGPLKLPLKRQHWICVREVGGAYYNLDSKLKMPEWIGGESELRKFLKYHLRGKNCELLLV 187

[Close]

BLAST of mi_v1.0.alternate_g25042.t1 vs. ExPASy Swiss-Prot
Match: JOS1_MOUSE (Josephin-1 OS=Mus musculus OX=10090 GN=Josd1 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.452e-33
Identity = 67/178 (37.64%), Postives = 103/178 (57.87%), Query Frame = 0

Query:    7 KIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNAL--TGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGENSLMGIVINVPVTRYAG----LWKSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLDY-IIGIGGEVLLV 177
            +IYHE+Q+ + C LH+LNN+FQ   AFTR +L EI ++L    PN         +  PH  ++   GNYD+NV++AAL+ +G   VW D+R +   I L     ++MG ++N+P +   G      K +HW+ +R++ G +YNLDS    P+      E+R+FL Y + G   E+LLV
Sbjct:   25 QIYHEKQRRELCALHALNNVFQDSNAFTRETLQEIFQRLS---PN--------TMVTPHKKSMLGNGNYDVNVIMAALQTKGYEAVWWDKRRDVGVIAL----TNVMGFIMNLPSSLCWGPLKLPLKRQHWICVREVGGAYYNLDSKLKMPEWIGGESELRKFLKYHLRGKNCELLLV 187

[Close]

BLAST of mi_v1.0.alternate_g25042.t1 vs. ExPASy Swiss-Prot
Match: JOS1_BOVIN (Josephin-1 OS=Bos taurus OX=9913 GN=JOSD1 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.284e-33
Identity = 67/178 (37.64%), Postives = 104/178 (58.43%), Query Frame = 0

Query:    7 KIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNAL--TGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGENSLMGIVINVPVTRYAG----LWKSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLD-YIIGIGGEVLLV 177
            +IYHE+Q+ + C LH+LNN+FQ   AFTR +L EI ++L    PN         +  PH  ++   GNYD+NV++AAL+ +G   VW D+R +  AI L     ++MG ++N+P +   G      K +HW+ +R++ G +YNLDS    P+      E+R+FL  ++ G   E+LLV
Sbjct:   25 QIYHEKQRRELCALHALNNVFQDSNAFTRETLQEIFQRL---SPN--------TMVTPHKKSMLGNGNYDVNVIMAALQTKGYEAVWWDKRRDVGAIAL----TNVMGFIMNLPSSLCWGPLKLPLKRQHWICVREVGGAYYNLDSKLKMPEWIGGKSELRKFLKHHLRGKNCELLLV 187

[Close]

BLAST of mi_v1.0.alternate_g25042.t1 vs. ExPASy Swiss-Prot
Match: JOS1_PONAB (Josephin-1 OS=Pongo abelii OX=9601 GN=JOSD1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.508e-32
Identity = 66/178 (37.08%), Postives = 103/178 (57.87%), Query Frame = 0

Query:    7 KIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNAL--TGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGENSLMGIVINVPVTRYAG----LWKSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLD-YIIGIGGEVLLV 177
            +IYHE+Q+ + C LH+LNN+FQ   AFTR +L EI ++L    PN         +  PH  ++   GNYD+NV++AAL+ +G   VW D+R +   I L     ++MG ++N+P +   G      K +HW+ +R++ G +YNLDS    P+      E+R+FL  ++ G   E+LLV
Sbjct:   25 QIYHEKQRRELCALHALNNVFQDSNAFTRDTLQEIFQRL---SPN--------TMVTPHKKSMLGNGNYDVNVIMAALQTKGYEAVWWDKRRDVGVIAL----TNVMGFIMNLPSSLCWGPLKLPLKRQHWICVREVGGAYYNLDSKLKMPEWIGGESELRKFLKHHLRGKNCELLLV 187

[Close]

BLAST of mi_v1.0.alternate_g25042.t1 vs. ExPASy Swiss-Prot
Match: JOS1_HUMAN (Josephin-1 OS=Homo sapiens OX=9606 GN=JOSD1 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.508e-32
Identity = 66/178 (37.08%), Postives = 103/178 (57.87%), Query Frame = 0

Query:    7 KIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNAL--TGNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGENSLMGIVINVPVTRYAG----LWKSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLD-YIIGIGGEVLLV 177
            +IYHE+Q+ + C LH+LNN+FQ   AFTR +L EI ++L    PN         +  PH  ++   GNYD+NV++AAL+ +G   VW D+R +   I L     ++MG ++N+P +   G      K +HW+ +R++ G +YNLDS    P+      E+R+FL  ++ G   E+LLV
Sbjct:   25 QIYHEKQRRELCALHALNNVFQDSNAFTRDTLQEIFQRL---SPN--------TMVTPHKKSMLGNGNYDVNVIMAALQTKGYEAVWWDKRRDVGVIAL----TNVMGFIMNLPSSLCWGPLKLPLKRQHWICVREVGGAYYNLDSKLKMPEWIGGESELRKFLKHHLRGKNCELLLV 187

[Close]

BLAST of mi_v1.0.alternate_g25042.t1 vs. ExPASy Swiss-Prot
Match: JOSL_DROME (Josephin-like protein OS=Drosophila melanogaster OX=7227 GN=CG3781 PE=2 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 1.994e-29
Identity = 61/180 (33.89%), Postives = 96/180 (53.33%), Query Frame = 0

Query:    8 IYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYPNKQTWTPLSVVFKPHHNALT-GNYDINVLIAALEGRGKSVVWHDRRNEASAIDLDGGENSLMGIVINVPVTRYAGLW-----KSRHWVALRKIDGVWYNLDSDFHAPQCFKDSKEVREFLDYIIGIGGEVLLVKNDK 181
            IYHERQ    C LH+LNNLFQ    F+++ L++    L       + W        PH + +  GNYD+NV++ AL+ R    VW DRR +   ++L    + + G ++NVP     G +       RHW+ALR+++G +YNLDS    P+C    ++  EFL   + +  E+ LV +++
Sbjct:   39 IYHERQTRHLCGLHALNNLFQGPDMFSKSELDDYCTTLT-----PRNW------LNPHRSWIGWGNYDVNVIMYALQQRNCEAVWFDRRRDPHCLNL----SVIFGFILNVPAQMSLGYYIPLPFHMRHWLALRRLNGSYYNLDSKLREPKCLGTEQQFLEFLATQLQMDHELFLVLDEE 203

The following BLAST results are available for this feature:

BLAST of mi_v1.0.alternate_g25042.t1 vs. ExPASy TrEMBL
BLAST of mi_v1.0.alternate_g25042.t1 vs. Araport11
BLAST of mi_v1.0.alternate_g25042.t1 vs. ExPASy Swiss-Prot

BLAST of mi_v1.0.alternate_g25042.t1 vs. ExPASy TrEMBL
Analysis Date: 2024-01-19 (Blastp of Citrus inodora CRC3784 v1.0 proteins vs UniProt TrEMBL)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
A0A2H5NCT7\|A0A2H5NCT7_CITUN	5.421e-132	98.90	Ubiquitinyl hydrolase 1 OS=Citrus unshiu OX=55188 ...	[more]
V4SMJ0\|V4SMJ0_CITCL	5.421e-132	98.90	Ubiquitinyl hydrolase 1 OS=Citrus clementina OX=85...	[more]
A0A067FHK4\|A0A067FHK4_CITSI	5.421e-132	98.90	Ubiquitinyl hydrolase 1 OS=Citrus sinensis OX=2711...	[more]
A0A5C7IYS0\|A0A5C7IYS0_9ROSI	3.137e-110	83.61	Ubiquitinyl hydrolase 1 OS=Acer yangbiense OX=1000...	[more]
A0A6P3Z9G3\|A0A6P3Z9G3_ZIZJJ	2.549e-104	77.22	Ubiquitinyl hydrolase 1 OS=Ziziphus jujuba OX=3269...	[more]
A0A314UAZ2\|A0A314UAZ2_PRUYE	4.877e-104	78.69	Ubiquitinyl hydrolase 1 OS=Prunus yedoensis var. n...	[more]
A0A5E4FX03\|A0A5E4FX03_PRUDU	3.112e-103	78.14	Ubiquitinyl hydrolase 1 OS=Prunus dulcis OX=3755 G...	[more]
M5WK40\|M5WK40_PRUPE	4.986e-103	77.60	Ubiquitinyl hydrolase 1 OS=Prunus persica OX=3760 ...	[more]
A0A6P5SJS4\|A0A6P5SJS4_PRUAV	1.098e-102	77.60	Ubiquitinyl hydrolase 1 OS=Prunus avium OX=42229 G...	[more]
A0A6J5V070\|A0A6J5V070_PRUAR	1.352e-102	77.60	Ubiquitinyl hydrolase 1 OS=Prunus armeniaca OX=365...	[more]

BLAST of mi_v1.0.alternate_g25042.t1 vs. Araport11
Analysis Date: 2024-01-19 (Blastp of Citrus inodora CRC3784 v1.0 proteins vs Araport11)
Total hits: 1

Position :

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Match Name	E-value	Identity	Description
AT2G29640.1	2.341e-83	70.30	\| JOSEPHIN-like protein \| Chr2:12671206-12673300 F...	[more]

BLAST of mi_v1.0.alternate_g25042.t1 vs. ExPASy Swiss-Prot
Analysis Date: 2024-01-19 (Blastp of Citrus inodora CRC3784 v1.0 proteins vs UniProt Swissprot)
Total hits: 9

Position :

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Match Name	E-value	Identity	Description
JOSL_ARATH	2.288e-82	70.30	Josephin-like protein OS=Arabidopsis thaliana OX=3...	[more]
JOS2_HUMAN	1.135e-37	41.48	Josephin-2 OS=Homo sapiens OX=9606 GN=JOSD2 PE=1 S...	[more]
JOS2_MOUSE	7.558e-37	40.11	Josephin-2 OS=Mus musculus OX=10090 GN=Josd2 PE=1 ...	[more]
JOS1_RAT	9.846e-34	38.20	Josephin-1 OS=Rattus norvegicus OX=10116 GN=Josd1 ...	[more]
JOS1_MOUSE	1.452e-33	37.64	Josephin-1 OS=Mus musculus OX=10090 GN=Josd1 PE=1 ...	[more]
JOS1_BOVIN	2.284e-33	37.64	Josephin-1 OS=Bos taurus OX=9913 GN=JOSD1 PE=2 SV=...	[more]
JOS1_PONAB	1.508e-32	37.08	Josephin-1 OS=Pongo abelii OX=9601 GN=JOSD1 PE=2 S...	[more]
JOS1_HUMAN	1.508e-32	37.08	Josephin-1 OS=Homo sapiens OX=9606 GN=JOSD1 PE=1 S...	[more]
JOSL_DROME	1.994e-29	33.89	Josephin-like protein OS=Drosophila melanogaster O...	[more]

InterPro

Analysis Name: InterProScan Analysis for Citrus inodora CRC3784 v1.0 v1.0 proteins
Date Performed: 2024-01-19

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.70.40		coord: 17..182 e-value: 7.2E-25 score: 89.1
IPR006155	Josephin domain	PFAM	PF02099	Josephin	coord: 13..177 e-value: 3.5E-33 score: 114.9
IPR006155	Josephin domain	PROSITE	PS50957	JOSEPHIN	coord: 5..182 score: 49.814182
IPR040053	Josephin-1/2	PANTHER	PTHR13291	JOSEPHIN 1, 2	coord: 1..181

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Alt_Scaffold_8:27593258..27593922+
coding sequence from alignment at Alt_Scaffold_8:27593258..27593922+

mRNA sequence

>mi_v1.0.alternate_g25042.t1-ucr_v1 ID=mi_v1.0.alternate_g25042.t1-ucr_v1; Name=mi_v1.0.alternate_g25042.t1; organism=Citrus inodora; type=mRNA; length=549bp
ATGGCGAGCGAAAATTGCAAAATTTATCACGAGAGGCAAAAATTACAGTT
CTGCCTCTTGCACTCACTCAATAATCTCTTTCAGCAAGAAGGTGCATTTA
CGCGAGCAAGCTTGAATGAAATTGCTGAGAAACTCGTGCTTGATTATCCA
AATAAGCAAACGTGGACTCCCTTATCTGTGGTCTTTAAGCCTCACCATAA
TGCATTGACTGGAAATTACGATATAAATGTACTTATTGCTGCTCTTGAAG
GAAGAGGAAAGAGTGTCGTGTGGCATGATCGTCGAAATGAGGCATCGGCA
ATTGATCTTGATGGCGGGGAAAATAGTTTGATGGGTATTGTGATTAATGT
TCCAGTTACTCGGTATGCTGGGCTTTGGAAGAGTAGACATTGGGTTGCAT
TGCGAAAGATTGACGGGGTTTGGTATAATTTGGATAGTGATTTTCATGCT
CCTCAGTGTTTTAAAGATAGCAAAGAAGTTAGGGAGTTCTTAGATTATAT
TATTGGTATTGGTGGGGAGGTTTTGCTTGTTAAGAATGATAAGGAGTGA

protein sequence of mi_v1.0.alternate_g25042.t1-ucr_v1

>mi_v1.0.alternate_g25042.t1-ucr_v1 ID=mi_v1.0.alternate_g25042.t1-ucr_v1; Name=mi_v1.0.alternate_g25042.t1-ucr_v1; organism=Citrus inodora; type=polypeptide; length=182bp
MASENCKIYHERQKLQFCLLHSLNNLFQQEGAFTRASLNEIAEKLVLDYP
NKQTWTPLSVVFKPHHNALTGNYDINVLIAALEGRGKSVVWHDRRNEASA
IDLDGGENSLMGIVINVPVTRYAGLWKSRHWVALRKIDGVWYNLDSDFHA
PQCFKDSKEVREFLDYIIGIGGEVLLVKNDKE

mRNA from alignment at Alt_Scaffold_8:27593258..27593922+

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

> ID=; Name=; organism= ; type=; length=665bp; location=Sequence derived from: Alt_Scaffold_8:27593258..27593922+ (Citrus inodora
ATGGCGAGCGAAAATTGCAAAATTTATCACGAGAGGCAAAAATTACAGTT
CTGCCTCTTGCACTCACTCAATAATCTCTTTCAGGTAATACCCATTTCTC
GTTTCTCCGGTTCTATTACAATTTTACTTGTTTGTTCTGTTATTTTGATG
AGAATTTGTTATGGGTTTGTGATGAATAACGTGGCTGTGTTATAATTCAG
CAAGAAGGTGCATTTACGCGAGCAAGCTTGAATGAAATTGCTGAGAAACT
CGTGCTTGATTATCCAAATAAGCAAACGTGGACTCCCTTATCTGTGGTCT
TTAAGCCTCACCATAATGCATTGACTGGAAATTACGATATAAATGTACTT
ATTGCTGCTCTTGAAGGAAGAGGAAAGAGTGTCGTGTGGCATGATCGTCG
AAATGAGGCATCGGCAATTGATCTTGATGGCGGGGAAAATAGTTTGATGG
GTATTGTGATTAATGTTCCAGTTACTCGGTATGCTGGGCTTTGGAAGAGT
AGACATTGGGTTGCATTGCGAAAGATTGACGGGGTTTGGTATAATTTGGA
TAGTGATTTTCATGCTCCTCAGTGTTTTAAAGATAGCAAAGAAGTTAGGG
AGTTCTTAGATTATATTATTGGTATTGGTGGGGAGGTTTTGCTTGTTAAG
AATGATAAGGAGTGA

Coding sequence (CDS) from alignment at Alt_Scaffold_8:27593258..27593922+

>mi_v1.0.alternate_g25042.t1-ucr_v1 ID=mi_v1.0.alternate_g25042.t1-ucr_v1; Name=mi_v1.0.alternate_g25042.t1; organism=Citrus inodora; type=CDS; length=549bp; location=Sequence derived from: Alt_Scaffold_8:27593258..27593922+ (Citrus inodora
ATGGCGAGCGAAAATTGCAAAATTTATCACGAGAGGCAAAAATTACAGTT
CTGCCTCTTGCACTCACTCAATAATCTCTTTCAGCAAGAAGGTGCATTTA
CGCGAGCAAGCTTGAATGAAATTGCTGAGAAACTCGTGCTTGATTATCCA
AATAAGCAAACGTGGACTCCCTTATCTGTGGTCTTTAAGCCTCACCATAA
TGCATTGACTGGAAATTACGATATAAATGTACTTATTGCTGCTCTTGAAG
GAAGAGGAAAGAGTGTCGTGTGGCATGATCGTCGAAATGAGGCATCGGCA
ATTGATCTTGATGGCGGGGAAAATAGTTTGATGGGTATTGTGATTAATGT
TCCAGTTACTCGGTATGCTGGGCTTTGGAAGAGTAGACATTGGGTTGCAT
TGCGAAAGATTGACGGGGTTTGGTATAATTTGGATAGTGATTTTCATGCT
CCTCAGTGTTTTAAAGATAGCAAAGAAGTTAGGGAGTTCTTAGATTATAT
TATTGGTATTGGTGGGGAGGTTTTGCTTGTTAAGAATGATAAGGAGTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR006155	Josephin
IPR040053	JOSD1/2

Vocabulary: **Molecular Function**
Term	Definition
GO:0004843	cysteine-type deubiquitinase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0016579	protein deubiquitination