CL8G029867011.t1_pri
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of CL8G029867011.t1_pri vs. DB:SwissProt
Match: CN15C_MEDTR (Protein CNGC15c OS=Medicago truncatula OX=3880 GN=CNGC15C PE=1 SV=1) HSP 1 Score: 1076.62 bits (2783), Expect = 0.000e+0 Identity = 539/707 (76.24%), Postives = 611/707 (86.42%), Query Frame = 1 Query: 1 MGYNNSRSVRFQDDHELSEKPPAMNGDGVIKFKYKFDGKQVPEKDVSGKPVKS------LKAKVLSRVFSEDYERVKKKIL--DPRGPAIRRWNKIFLVACLVSLFVDPLFFYLPVVRHEVCIDIGIPLEVILTIIRTLGDAFYIIQIYIRFRTAYVAPSSRVFGRGELVIDPSKIASRYLKKGFWIDFVAALPLPQVLIWFIIPNLRGSTMRNTKNVLRFIIIFQYLPRLFLIFPLSQQIINATGVVTETAWAGAAYNLVLFMLASHVLGACWYLLSIERQEACWRSVCNSEKPSCQYGYFDCHKVEDPNRESWFKFSNITSLCDPNKVSSYKFGIYADAVTFDVTTAPFFNKYFYCLWWGLKNLSSVGQNLATSTYVGEIIFAIIIATLGLVLFALLIGNMQTYLQSTTIRLEEWRIKRTDTEQWMHHRQLPPELRQSVRKYDQYKWVATRGVDEEVLLKGLPTDLRRDIKRHICLDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKSISEVEAFALRADDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQXXXXXXXXXXXXXXXXXXXNIPAEPDSPQPPS-----GLSIYAARLSASTRRA-NKHSRSDSGVVTTLQKPAEPDFS 2079 MG++N RS RF+DD E+S K P +G +K KY DG Q+PE+ S K K+ LK +VLSRVFSEDYERVKK++L DPRG I RWNKIFLVACLVSLFVDPLFFYLPVVR EVCIDIG LEVILT++R+ GD FYI+QI ++FRTAYVAPSS+VFGRGELV+ SKIA RY KGFW+DF+AALPLPQVLIW IIP LRGSTM NTKNVLRF IIFQY+PRL+LIFPLS QI+ ATGVVTETAWAGAAYNL+L+MLASH+LGACWYLLSIERQEACW+SVCN EK +CQYG+F+CH ++D R +WF SN+T+LC PN Y FGIYADA+T VT++PFFNKYFYCLWWGL+NLSS+GQ L TST++GEI+ AI++ATLGLVLFALLIGNMQTYLQS T+RLEEWR+KRTDTEQWMHHRQLPPELR+S+RKY+QYKWVATRGV+EE LLKGLP DLRR+IKRH+CL+LVR VPLFDQMDERMLDAICERLKPALCTEGT+LVREGDPVNEMLFIIRGHLDSYTTNGGR GFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVK+ SEVEAFAL A+DLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRR+KKRKEAAELRAKEN+ A ++ + G +Y R++ STR+ N HS ++SGVV++LQKP EPDFS Sbjct: 1 MGFDNPRSERFEDDPEIS-KIPTTSG---VKVKYHIDGTQIPEQS-SKKSRKNETRNKFLKTRVLSRVFSEDYERVKKRVLVLDPRGQLIHRWNKIFLVACLVSLFVDPLFFYLPVVREEVCIDIGKTLEVILTVVRSFGDLFYIVQICMKFRTAYVAPSSKVFGRGELVLTYSKIALRYFSKGFWLDFIAALPLPQVLIWIIIPTLRGSTMANTKNVLRFFIIFQYIPRLYLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHILGACWYLLSIERQEACWKSVCNMEKSNCQYGFFNCHSIKDAPRVAWFIASNVTNLCSPN-AGFYPFGIYADAMTSKVTSSPFFNKYFYCLWWGLRNLSSLGQGLLTSTFIGEIMVAIVVATLGLVLFALLIGNMQTYLQSITVRLEEWRVKRTDTEQWMHHRQLPPELRESIRKYNQYKWVATRGVEEEDLLKGLPLDLRREIKRHLCLELVRGVPLFDQMDERMLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRDGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKAFSEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRHKKRKEAAELRAKENLVAASEAENEIAKKYGKGFVVYGTRVARSTRKGVNMHSGTNSGVVSSLQKPTEPDFS 701
BLAST of CL8G029867011.t1_pri vs. DB:SwissProt
Match: CNG15_ARATH (Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis thaliana OX=3702 GN=CNGC15 PE=3 SV=1) HSP 1 Score: 1045.8 bits (2703), Expect = 0.000e+0 Identity = 530/697 (76.04%), Postives = 592/697 (84.94%), Query Frame = 1 Query: 1 MGYNNSRSVRFQDDHELSEKPPAMNGDGVIKFKYKFDGKQVPEKDVSGKPVKSLKAKVLSRVFSEDYERVKKKILDPRGPAIRRWNKIFLVACLVSLFVDPLFFYLPVVRHEVCIDIGIPLEVILTIIRTLGDAFYIIQIYIRFRTAYVAPSSRVFGRGELVIDPSKIASRYLKKGFWIDFVAALPLPQVLIWFIIPNLRGSTMRNTKNVLRFIIIFQYLPRLFLIFPLSQQIINATGVVTETAWAGAAYNLVLFMLASHVLGACWYLLSIERQEACWRSVCNSEKPSCQYGYFDCHKVEDPNRESWFKFSNITSLCDPNKVSSYKFGIYADAVTFDVTTAPFFNKYFYCLWWGLKNLSSVGQNLATSTYVGEIIFAIIIATLGLVLFALLIGNMQTYLQSTTIRLEEWRIKRTDTEQWMHHRQLPPELRQSVRKYDQYKWVATRGVDEEVLLKGLPTDLRRDIKRHICLDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKSISEVEAFALRADDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQXXXXXXXXXXXXXXXXXXXNIPAEPDSPQPPSGLSIYAARLSASTRRANKHSR--SDSGVVTTLQKPAEPDFSVD 2085 MGY NSRSVRFQ+D E+ G+ +K K+K +G Q+ + K K LKAKVLSRVFSED ERVK KILDPRG IRRWNKIFL+ACLVSLFVDPLFF+LPV+R+E CI IG+ LEV+LT+IR+L DAFYI QI IRFRTAY+AP SRVFGRGELVID KIA RYL K FWI VAALPLPQVLIW IIPNLRGS M NTKNVLRFIIIFQY+PR+FLIFPLS+QII ATGVVTETAWAGAAYNL+L+MLASHVLGACWYLL++ERQEACWR CN EK CQY +F+C ++EDP R SWF++SNIT++C P Y+FGI+ DAVT VT++ F NKYFYCLWWGLKNLSS+GQNLATSTY GEI+FAIIIATLGLVLFALLIGNMQTYLQSTT+RLEEWRI+RTDTEQWMHHRQLPPELRQ+VRKYDQYKW+ATRGVDEE LL LP DLRRDIKRH+C DLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSC IGPGDFCGEELLTWALDPRP VILPSSTRTVK+I EVEAFAL+A+DL+FVASQFRRLH+KQLRHKFRFYSHQWRTWAACFIQAAWRR++KRK ELRAKE ++ ARL+ + K++R SDSG+++++QKP EPDFS + Sbjct: 1 MGYGNSRSVRFQEDQEVVH-----GGESGVKLKFKINGTQINNVKMMSKG-KFLKAKVLSRVFSEDLERVKTKILDPRGQTIRRWNKIFLIACLVSLFVDPLFFFLPVMRNEACITIGVRLEVVLTLIRSLADAFYIAQILIRFRTAYIAPPSRVFGRGELVIDSRKIAWRYLHKSFWIHLVAALPLPQVLIWIIIPNLRGSPMTNTKNVLRFIIIFQYVPRMFLIFPLSRQIIKATGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERQEACWRHACNIEKQICQYRFFECRRLEDPQRNSWFEWSNITTICKPAS-KFYEFGIFGDAVTSTVTSSKFINKYFYCLWWGLKNLSSLGQNLATSTYAGEILFAIIIATLGLVLFALLIGNMQTYLQSTTMRLEEWRIRRTDTEQWMHHRQLPPELRQAVRKYDQYKWLATRGVDEEALLISLPLDLRRDIKRHLCFDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCLIGPGDFCGEELLTWALDPRPVVILPSSTRTVKAICEVEAFALKAEDLQFVASQFRRLHTKQLRHKFRFYSHQWRTWAACFIQAAWRRHRKRKYKTELRAKEEFHYRFEAA---------TARLAVN---GGKYTRSGSDSGMMSSIQKPVEPDFSSE 678
BLAST of CL8G029867011.t1_pri vs. DB:SwissProt
Match: CN15B_MEDTR (Protein CNGC15b OS=Medicago truncatula OX=3880 GN=CNGC15B PE=1 SV=2) HSP 1 Score: 990.719 bits (2560), Expect = 0.000e+0 Identity = 476/614 (77.52%), Postives = 535/614 (87.13%), Query Frame = 1 Query: 31 FQDDHELSEKPPAMNGDGVIKFKYKFDGKQVPEKDVSGKPVKSLKAKVLSRVFSEDYERVKKK--ILDPRGPAIRRWNKIFLVACLVSLFVDPLFFYLPVVRHEVCIDIGIPLEVILTIIRTLGDAFYIIQIYIRFRTAYVAPSSRVFGRGELVIDPSKIASRYLKKGFWIDFVAALPLPQVLIWFIIPNLRGSTMRNTKNVLRFIIIFQYLPRLFLIFPLSQQIINATGVVTETAWAGAAYNLVLFMLASHVLGACWYLLSIERQEACWRSVCNSEKPSCQYGYFDCHKVEDPNRESWFKFSNITSLCDPNKVSSYKFGIYADAVTFDVTTAPFFNKYFYCLWWGLKNLSSVGQNLATSTYVGEIIFAIIIATLGLVLFALLIGNMQTYLQSTTIRLEEWRIKRTDTEQWMHHRQLPPELRQSVRKYDQYKWVATRGVDEEVLLKGLPTDLRRDIKRHICLDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKSISEVEAFALRADDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQ 1866 F+ DH K + NGD IKF EK V+ +VLSRVFSEDY+RVK++ I DPRG I +WNKIFLVACL+SLFVDPLFFYLP+V+ EVCIDIGI +EV L IIR++ D FY+I I++RF TAYVAPSSRVFGRGELVID SKIASRYL KGF++DF+AALPLPQVLIW +IPNL GST+ NTKNVLRFIII QYLPRLFLIFPLS QI+ ATGVVTETAWAGAAYNL+L+MLASHVLGACWYLLSIERQEACW+SVC E+ SCQ+ +FDC+ V+D R SWF SN+T+LC PN + Y+FGIY DAVT VTT+ FFNKYF+CLWWGL+NLSS+GQ L TST+VGEI+FAI+IATLGLVLFALLIGNMQTYLQSTT+RLEEWR+KRTDTEQWMHHRQLP ELRQSVRKYDQYKW+ATRGVDEE LL+GLP DLRRDIKRH+CL+LVRRVPLFD MDERMLDAICERLKPALCTE T+LVREGDPVNEMLFIIRG+LDSYTT+GGRTGFFNSCRIGPGDFCGEELLTWALDPRP++++PSSTRTVK+ISEVEAFAL A+DLKFVASQFRRLHSKQLR+K RF+SHQWRTWAACFIQ Sbjct: 11 FEGDHLELAKLTSPNGDNGIKFN---------EKHVA--------PRVLSRVFSEDYKRVKRRRRIFDPRGQTIHQWNKIFLVACLISLFVDPLFFYLPIVQDEVCIDIGIAVEVFLIIIRSIADVFYVIHIFMRFHTAYVAPSSRVFGRGELVIDSSKIASRYLHKGFFLDFIAALPLPQVLIWIVIPNLGGSTIANTKNVLRFIIIIQYLPRLFLIFPLSSQIVKATGVVTETAWAGAAYNLMLYMLASHVLGACWYLLSIERQEACWKSVCKLEESSCQFDFFDCNMVKDSLRVSWFVTSNVTNLCSPNSLF-YQFGIYGDAVTSKVTTSAFFNKYFFCLWWGLRNLSSLGQGLLTSTFVGEIMFAIVIATLGLVLFALLIGNMQTYLQSTTVRLEEWRVKRTDTEQWMHHRQLPQELRQSVRKYDQYKWIATRGVDEESLLRGLPLDLRRDIKRHLCLELVRRVPLFDAMDERMLDAICERLKPALCTENTYLVREGDPVNEMLFIIRGNLDSYTTDGGRTGFFNSCRIGPGDFCGEELLTWALDPRPTMVIPSSTRTVKAISEVEAFALIAEDLKFVASQFRRLHSKQLRNKLRFHSHQWRTWAACFIQ 606
BLAST of CL8G029867011.t1_pri vs. DB:SwissProt
Match: CN15A_MEDTR (Protein CNGC15a OS=Medicago truncatula OX=3880 GN=CNGC15A PE=1 SV=1) HSP 1 Score: 903.664 bits (2334), Expect = 0.000e+0 Identity = 455/707 (64.36%), Postives = 544/707 (76.94%), Query Frame = 1 Query: 16 SRSVRFQDDHELSEKPPAMNGDGVIKFKYKFDGKQVPEKDVSGKPVKSLKAKVLSRVFSEDYERVKKKILDPRGPAIRRWNKIFLVACLVSLFVDPLFFYLPVVRHEVCIDIGIPLEVILTIIRTLGDAFYIIQIYIRFRTAYVAPSSRVFGRGELVIDPSKIASRYLKKGFWIDFVAALPLPQVLIWFIIPNLRGSTMRNTKNVLRFIIIFQYLPRLFLIFPLSQQIINATGVVTETAWAGAAYNLVLFMLASHVLGACWYLLSIERQEACWRSVCNSEKPSCQYGYFDCHKVEDPNRESWFKFSNITSLCDPNKVSSYKFGIYADAVTFDVTTAPFFNKYFYCLWWGLKNLSSVGQNLATSTYVGEIIFAIIIATLGLVLFALLIGNMQTYLQSTTIRLEEWRIKRTDTEQWMHHRQLPPELRQSVRKYDQYKWVATRGVDEEVLLKGLPTDLRRDIKRHICLDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKSISEVEAFALRADDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQXXXXXXXXXXXXXXXXXXXNIP--------AEPDSP------QPPSG--LSIYAARLSASTRRA-NKHSRSDSGVVTTLQKPAEPDFSVD 2085 SR+VRF DD E EK + Y+ + KD KP S + LSRVFSEDY+ + + DPRGP I WNKIFL ACL+SLFVDPLFFYLPV + E CID+ I LEV LTIIRT DAFYII IYIRF+TAY+APSSRV GRGEL+ID SKIAS Y+KK W D VAALPLPQVLIW +IPN++GS M +++V+R + IFQYL RL+LI+PLS +I A+GV+ E AWAGAAY L L+MLASHVLG+ WYLLSIERQ+ CW+ C + P CQY Y DC + DPNR +W K SN++ LCD N ++FGI+ DAVT ++T++ F KY+YCLWWGL+NLSS G+NL TST+V EI FA+I+A LGLVLFALLIGNMQTYLQSTTIRLEEWRI+RTDTE+WMHHRQLP L+++VR++DQ++WVATRGVDEE +L+ LP DLRRDIKRH+CL+LVR+VPLFDQMD+RMLDAICERLKP LCT GT +VREGDPV+EMLFI+RG LDS TTNGGRTGFFN+CRIG GDFCGEELL WALDPRP+ +LPSSTRTV++I+EVEAFAL A+DLKFVA+QFRRLHSKQLR FRFYSHQWRTWAACFIQAAW RYK+ KE E++ KEN+ DS Q P G S+Y+ +L S RR + S+ ++ TL+KP EPDF+ D Sbjct: 6 SRAVRFHDDLE-KEKLQEGEESHMEMRAYEMSSEYKHGKDAINKP--SSNGRGLSRVFSEDYDAGEILVFDPRGPRINLWNKIFLAACLISLFVDPLFFYLPVAKKEKCIDMSIGLEVSLTIIRTFVDAFYIIHIYIRFQTAYIAPSSRVSGRGELIIDSSKIASNYMKKELWSDLVAALPLPQVLIWAVIPNIKGSEMIASRHVVRLVSIFQYLLRLYLIYPLSSKITKASGVMMEKAWAGAAYYLTLYMLASHVLGSTWYLLSIERQDECWKKACTLQYPHCQYHYLDCQSLSDPNRNAWLKSSNLSGLCDQNS-HFFQFGIFDDAVTLEITSSNFLTKYYYCLWWGLRNLSSSGENLLTSTHVAEINFAVIVAILGLVLFALLIGNMQTYLQSTTIRLEEWRIRRTDTERWMHHRQLPHYLKENVRRHDQFRWVATRGVDEEAILRDLPVDLRRDIKRHLCLNLVRQVPLFDQMDDRMLDAICERLKPTLCTPGTCIVREGDPVDEMLFIVRGRLDSCTTNGGRTGFFNTCRIGSGDFCGEELLPWALDPRPTAVLPSSTRTVRAITEVEAFALIAEDLKFVAAQFRRLHSKQLRQTFRFYSHQWRTWAACFIQAAWFRYKRMKETNEVKEKENLMMMSNVKYYGNDDSQYFSAPLQVPKGSSYSMYSGKLVGSLRRGRSMRYGSELDMLGTLRKPIEPDFNDD 708
BLAST of CL8G029867011.t1_pri vs. DB:SwissProt
Match: CNG14_ARATH (Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis thaliana OX=3702 GN=CNGC14 PE=2 SV=2) HSP 1 Score: 763.451 bits (1970), Expect = 0.000e+0 Identity = 381/670 (56.87%), Postives = 485/670 (72.39%), Query Frame = 1 Query: 181 RVFSEDYERVKKKILDPRGPAIRRWNKIFLVACLVSLFVDPLFFYLPVVRH---EVCIDIGIPLEVILTIIRTLGDAFYIIQIYIRFRTAYVAPSSRVFGRGELVIDPSKIASRYLKKGFWIDFVAALPLPQVLIWFIIPNLRGSTMRNTKNVLRFIIIFQYLPRLFLIFPLSQQIINATGVVTETAWAGAAYNLVLFMLASHVLGACWYLLSIERQEACWRSVCNSEKP--SCQYGYFDCHKVEDPNRESWFKFSNITSLCDPNKVSSYKFGIYADAVTFDVTTAPFFNKYFYCLWWGLKNLSSVGQNLATSTYVGEIIFAIIIATLGLVLFALLIGNMQTYLQSTTIRLEEWRIKRTDTEQWMHHRQLPPELRQSVRKYDQYKWVATRGVDEEVLLKGLPTDLRRDIKRHICLDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKSISEVEAFALRADDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQXXXXXXXXXXXXXXXXXXXNIPA-----------------------------EPDSPQPPSGLSIYAARLSASTRRANKHSRSDSGVVTTLQKPAEPDFSVDE 2088 +VF E++E + KILDP G A+ +WN++FL CLV+L+VDPLFF+L V+ C+ + L +++T RTL D FY++ I I+FRTAYV+ +SRVFGRGELV DP IA RYL+ F +D +A LPLPQ++ WFI+P++R S +T N L I++ QY+PRL+LIFPLS +II ATGVVT TAWAGAAYNL+ +MLASH+LG+ WYLLSIERQ CW++ C+ E C +FDC + +R +W + + S CDP+ + FGI+ADA+T +V ++PF KY YCLW+GL+NLSS GQNL+TST V E +FAI++A GLVLFALLIGNMQTYLQS T+RLEEWR+KR DTE+WM HR LP LR+ VR++ QYKW+ATRGVDEE +L LP DLRRDI+RH+CLDLVRRVPLF QMD+++LDAICERL +L T+G ++VREGDPV EMLFIIRG L+S TTNGGRTGFFNS + PGDFCGEELL WAL P+ +V LPSSTRTV+++ EVEAFAL+A DLKFVA+QFRRLHSK+L+H FR+YSHQWRTWAACF+Q AWRRYK++K A L E+ + + +P +I A+R + +TRR H D + L KP EPDFSVD+ Sbjct: 59 KVFPENFEIERDKILDPGGDAVLQWNRVFLFWCLVALYVDPLFFFLSSVKRIGRSSCMTTDLKLGIVITFFRTLADLFYVLHIVIKFRTAYVSRTSRVFGRGELVKDPKLIARRYLRSDFIVDLIACLPLPQIVSWFILPSIRSSHSDHTTNALVLIVLVQYIPRLYLIFPLSAEIIKATGVVTTTAWAGAAYNLLQYMLASHILGSAWYLLSIERQATCWKAECHKESVPLQCVTDFFDCGTLHRDDRNNWQNTTVVFSNCDPSNNIQFTFGIFADALTKNVVSSPFLEKYLYCLWFGLQNLSSYGQNLSTSTSVLETMFAILVAIFGLVLFALLIGNMQTYLQSITVRLEEWRLKRRDTEEWMGHRLLPQNLRERVRRFVQYKWLATRGVDEETILHSLPADLRRDIQRHLCLDLVRRVPLFAQMDDQLLDAICERLASSLSTQGNYIVREGDPVTEMLFIIRGKLESSTTNGGRTGFFNSITLRPGDFCGEELLAWALLPKSTVNLPSSTRTVRALEEVEAFALQAGDLKFVANQFRRLHSKKLQHTFRYYSHQWRTWAACFVQVAWRRYKRKKLAKSLSLAESFSSYDEEEAVAVAATEEMSHEGEAQSGAKARHHTSNVKPHFAATILASRFAKNTRR-TAHKLKDVE-IPMLPKPDEPDFSVDD 726
BLAST of CL8G029867011.t1_pri vs. DB:SwissProt
Match: CNG17_ARATH (Cyclic nucleotide-gated ion channel 17 OS=Arabidopsis thaliana OX=3702 GN=CNGC17 PE=1 SV=1) HSP 1 Score: 757.288 bits (1954), Expect = 0.000e+0 Identity = 377/713 (52.88%), Postives = 499/713 (69.99%), Query Frame = 1 Query: 31 FQDDHELSEKPPAMNGDGVIKFKYKFDGKQVPEKDVSGKPVKSLKAKVLSRVFSEDYERVKKKILDPRGPAIRRWNKIFLVACLVSLFVDPLFFYLPVV---RHEVCIDIGIPLEVILTIIRTLGDAFYIIQIYIRFRTAYVAP--SSRVFGRGELVIDPSKIASRYLKKGFWIDFVAALPLPQVLIWFIIPNLRGSTMRNTKNVLRFIIIFQYLPRLFLIFPLSQQIINATGVVTETAWAGAAYNLVLFMLASHVLGACWYLLSIERQEACWRSVCNSE--KPSCQYGYFDCHKVEDPNRESWFKFSNITSLCDPNKVSSYKFGIYADAVTFDVTTAPFFNKYFYCLWWGLKNLSSVGQNLATSTYVGEIIFAIIIATLGLVLFALLIGNMQTYLQSTTIRLEEWRIKRTDTEQWMHHRQLPPELRQSVRKYDQYKWVATRGVDEEVLLKGLPTDLRRDIKRHICLDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKSISEVEAFALRADDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQXXXXXXXXXXXXXXXXXXXNI-----------------PAEPDSPQPPS--GLSIYAARLSASTRRANKHSRSDSGVVTTLQKPAEPDFSVDEE 2091 + + E E A+N +K P+ + G ++ A Y K ILDP + +WN +F+V+C+V+LF+DPL+F++P + ++ C L +++T RT+ D FY++ I+I+FRT ++AP S+RVFGRGELV+DP IA RY+K F ID +A LPLPQ++IWF+I + + N + I++ QY+PR +LI PLS QI+ ATGVVT+TAWAGAAYNL+L+MLASHVLGA WY+LS++R +CW+S CN E + +CQ Y DC + D N+ +W + + LCD +K+GI+ +A+T +V ++ FF +YFYCLWWGL+ LSS GQNL+T+ ++GE FA++IA GLVLFA LIGNMQTYLQS T+RLEEWR+K+ DTE+WM HRQLP ELR VR+Y+QYKW+ATRGVDEEVLL+ LPTDLRRDI+RH+CLDLVRRVP F QMD+++LDAICERL +LCTEGT+LVREGD ++EMLFIIRG L+S TTNGGRTGFFNS + PGDFCGEELL+WAL P+ ++ LPSSTRTV+++ EVEAFALRA+DLKFVA+QFRRLHSK+L+H FRFYSH WRTWAACFIQAAWRRYK+R L A E++ +SP+ G+ + A+R +A+TRR R + +KP EPDFS + + Sbjct: 12 YSEGKESKEAKWAVNDPMSKSYKLSLPSALRPDNLLPGNRLRYTDASKSKSSKVSWY----KTILDPGSEIVLKWNWVFIVSCMVALFIDPLYFFVPAIGGDKNYPCARTDTSLSILVTFFRTIADLFYLLHIFIKFRTGFIAPNSSTRVFGRGELVMDPKAIAWRYIKSDFIIDLIATLPLPQIVIWFVISTTKSYRFDHNNNAIALIVLLQYIPRFYLIIPLSSQIVKATGVVTKTAWAGAAYNLLLYMLASHVLGAAWYILSVDRYTSCWKSRCNGEAGQVNCQLYYLDCDSMYDNNQMTWANVTKVFKLCDARN-GEFKYGIFGNAITKNVVSSQFFERYFYCLWWGLQQLSSYGQNLSTTMFMGETTFAVLIAIFGLVLFAHLIGNMQTYLQSLTVRLEEWRLKKRDTEEWMRHRQLPEELRNRVRRYEQYKWLATRGVDEEVLLQSLPTDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLCTEGTYLVREGDLISEMLFIIRGRLESSTTNGGRTGFFNSIILRPGDFCGEELLSWALLPKSTLNLPSSTRTVRALVEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKRRVMENNLTAIESMENEEGEVGEELVVVEEEECVEESPRTKMNLGVMVLASRFAANTRRGVAAQRVKDVELPRFKKPEEPDFSAEHD 719
BLAST of CL8G029867011.t1_pri vs. DB:SwissProt
Match: CNGC9_ARATH (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana OX=3702 GN=CNGC9 PE=3 SV=1) HSP 1 Score: 716.457 bits (1848), Expect = 0.000e+0 Identity = 367/654 (56.12%), Postives = 475/654 (72.63%), Query Frame = 1 Query: 154 KSLKAKVLSRVFSEDYERVKKKILDPRGPAIRRWNKIFLVACLVSLFVDPLFFYLPVVR-HEVCIDIGIPLEVILTIIRTLGDAFYIIQIYIRFRTAYVAPSSRVFGRGELVIDPSKIASRYLKKGFWIDFVAALPLPQVLIWFIIPNLRGSTMRNTKNVLRFIIIFQYLPRLFLIFPLSQQIINATGVVTETAWAGAAYNLVLFMLASHVLGACWYLLSIERQEACWRSVCNSEKPSCQYGYFDCHKVEDPNRESW--FKFSNITSLCDPNKVSS--YKFGIYADAVTFD-VTTAPFFNKYFYCLWWGLKNLSSVGQNLATSTYVGEIIFAIIIATLGLVLFALLIGNMQTYLQSTTIRLEEWRIKRTDTEQWMHHRQLPPELRQSVRKYDQYKWVATRGVDEEVLLKGLPTDLRRDIKRHICLDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKSISEVEAFALRADDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQXXXXXXXXXXXXXXXXXXXNIPAEPDSPQPPSGLSIYAARLSASTRRANKHSRSDSGVVTTL---QKPAEPDFSVDE 2088 +S+ V VF ED + +KKI DP+ + NK+F+ +C++++ VDPLF YLP V+ +E CI I L +I T +RT+ DAFY+ + +RFRTA+VAPSSRVFGRGELVIDP++IA RYL++ F IDF++ LPLPQ+++W + +G+++ TK LR II+ QY+PR ++PLS ++ GV ETAWAGAAY L+L+MLASH++GA WYLL++ER CW VC++ C + C + +W K S + C N + + FGIY A++ V++ F +KYF+CLWWGL+NLS++GQ L TSTY GE+IF+I +A GL+LFALLIGNMQTYLQS TIRLEE R+KR D+EQWMHHR LPPELR+ VR+YDQYKW+ TRGVDEE L++ LP DLRRDIKRH+CL LVRRVPLF+ MDER+LDAICERLKP L TE ++LVREGDPVNEMLFIIRG L+S TT+GGR+GFFN + GDFCGEELLTWALDP+ LPSSTRT K+++EVEAFAL AD+LKFVASQFRRLHS+Q++H FRFYS QWRTWAA FIQAAWRRY K+K+ +LR +E E + + A++ +A+ R +R ++ L QKP+EPDFS D+ Sbjct: 81 RSIGLGVSRAVFPEDLKVSEKKIFDPQDKFLLLCNKLFVTSCILAVSVDPLFLYLPFVKDNEKCIGIDRKLAIIATTLRTVIDAFYLFHMALRFRTAFVAPSSRVFGRGELVIDPAQIAKRYLQQYFIIDFLSVLPLPQIVVWRFLYISKGASVLATKRALRSIILVQYIPRFIRLYPLSSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAIWYLLALERYNGCWTKVCSNSSLDCHRNFLFCGNEKMDGYAAWTTIKDSVLQLNCPVNTTDNPPFDFGIYLRALSSGIVSSKSFVSKYFFCLWWGLQNLSTLGQGLETSTYPGEVIFSIALAIAGLLLFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLPPELRERVRRYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLYTESSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGDFCGEELLTWALDPKSGSNLPSSTRTAKALTEVEAFALIADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAAIFIQAAWRRYVKKKKLEQLRKEEE---EGEGSVTSIRATFLASKFAANALRKVHKNRIEAKSTIELVKYQKPSEPDFSADD 731
BLAST of CL8G029867011.t1_pri vs. DB:SwissProt
Match: CNGC1_ARATH (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana OX=3702 GN=CNGC1 PE=1 SV=1) HSP 1 Score: 716.072 bits (1847), Expect = 0.000e+0 Identity = 376/721 (52.15%), Postives = 483/721 (66.99%), Query Frame = 1 Query: 1 MGYNNSRSVRFQD--------DHELSEKPPAMNGDGVIKFKYKFDGKQVPEKDVSGKPVKSLKAKVLSRVFSEDYER---VKKKILDPRGPAIRRWNKIFLVACLVSLFVDPLFFYLPVVRH-EVCIDIGIPLEVILTIIRTLGDAFYIIQIYIRFRTAYVAPSSRVFGRGELVIDPSKIASRYLKKGFWIDFVAALPLPQVLIWFIIPNLRGSTMRNTKNVLRFIIIFQYLPRLFLIFPLSQQIINATGVVTETAWAGAAYNLVLFMLASHVLGACWYLLSIERQEACWRSVCNSEKPSCQYGYFDCHKVEDPNRESWFKFSNITSLCDPNKVSSYKFGIYADAVTFDVTTAPFF-NKYFYCLWWGLKNLSSVGQNLATSTYVGEIIFAIIIATLGLVLFALLIGNMQTYLQSTTIRLEEWRIKRTDTEQWMHHRQLPPELRQSVRKYDQYKWVATRGVDEEVLLKGLPTDLRRDIKRHICLDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKSISEVEAFALRADDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQXXXXXXXXXXXXXXXXXXXN-----IPAEPDSPQPPSGLSIYAARLSASTRRANKHSRS-------DSGVVTTLQKPAEPDFSVDE 2088 M + + VRFQD D E S K G + K + S +K K S F E + KILDP+GP ++RWNKIF++AC++++ +DPLFFY+P++ + C+ I +E+ +++R+ D FY++ I +FRT ++APSSRVFGRG LV D +IA RYL F ID +A LPLPQ++I IIP++RGS+ NTKN+L+FI+ FQY+PR I+PL +++ +G++TETAWAGAA+NL L+MLASHV GA WYL SIER+ CW+ C P C C DP F N + + + FGI+ DA+ V + F K+FYC WWGL+NLSS+GQNL TSTY+ EI FA+ I+ GLVLF+ LIGNMQTYLQSTT RLEE R+KR D EQWM HR LP LR+ +R+Y+QYKW TRGVDEE LL LP DLRRDIKRH+CL L+ RVP+F++MDE++LDA+C+RL+P L TE +++VREGDPV+EMLFI+RG L + TTNGGRTGF NS +G GDFCGEELLTWALDP S LP STRTV+++ EVEAFAL+ADDLKFVASQFRRLHSKQLRH FR+YS QW+TWAACFIQAAWRRY K+K L+ +EN + E P G +IYA+R +A+ R + S S + LQKPAEPDF+ D+ Sbjct: 1 MNFRQEKFVRFQDWKSDKTSSDVEYSGKNEIQTGI-FQRTISSISDKFYRSFESSSARIKLFKRSYKSYSFKEAVSKGIGSTHKILDPQGPFLQRWNKIFVLACIIAVSLDPLFFYVPIIDDAKKCLGIDKKMEITASVLRSFTDVFYVLHIIFQFRTGFIAPSSRVFGRGVLVEDKREIAKRYLSSHFIIDILAVLPLPQMVILIIIPHMRGSSSLNTKNMLKFIVFFQYIPRFIRIYPLYKEVTRTSGILTETAWAGAAFNLFLYMLASHVFGAFWYLFSIERETVCWKQACERNNPPCISKLLYC----DPETAGGNAFLNESCPIQTPNTTLFDFGIFLDALQSGVVESQDFPQKFFYCFWWGLQNLSSLGQNLKTSTYIWEICFAVFISIAGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPENLRKRIRRYEQYKWQETRGVDEENLLSNLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTITTNGGRTGFLNSEYLGAGDFCGEELLTWALDPHSSSNLPISTRTVRALMEVEAFALKADDLKFVASQFRRLHSKQLRHTFRYYSQQWKTWAACFIQAAWRRYIKKKLEESLKEEENRLQDALAKEACGSSPSLGATIYASRFAANILRTIRRSGSVRKPRMPERMPPMLLQKPAEPDFNSDD 716
BLAST of CL8G029867011.t1_pri vs. DB:SwissProt
Match: CNG18_ARATH (Cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana OX=3702 GN=CNGC18 PE=1 SV=1) HSP 1 Score: 711.449 bits (1835), Expect = 0.000e+0 Identity = 353/668 (52.84%), Postives = 464/668 (69.46%), Query Frame = 1 Query: 211 KKKILDPRGPAIRRWNKIFLVACLVSLFVDPLFFYLPVVRHEVCIDIGIPLEVILTIIRTLGDAFYIIQIYIRFRTAYVAPSSRVFGRGELVIDPSKIASRYLKKGFWIDFVAALPLPQVLIWFIIPNLRGSTMRNTKNVLRFIIIFQYLPRLFLIFPLSQQIINATGVVTETAWAGAAYNLVLFMLASHVLGACWYLLSIERQEACWRSVCNSEKP----SCQYGYFDCHKVEDPNRESWFKFSNITSLCDP-NKVSSYKFGIYADAVTFDVTTAPFFNKYFYCLWWGLKNLSSVGQNLATSTYVGEIIFAIIIATLGLVLFALLIGNMQTYLQSTTIRLEEWRIKRTDTEQWMHHRQLPPELRQSVRKYDQYKWVATRGVDEEVLLKGLPTDLRRDIKRHICLDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKSISEVEAFALRADDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQXXXXXXXXXXXXXXXXXXXN----IPAEPDSPQPPS---------------------GLSIYAARLSASTRRANKHSRSDS------GVVTTLQ-----KPAEPDFSVDEE 2091 + +ILDP + WN +FL+ +++LF+DP +FY+P V C+ I I L +T RT+ D F+++ I+++FRTA+VA SSRVFGRGELV+D +IA RYLK F ID A LPLPQ++IW +IP T + + L I++ QY+PR F+IFPL+Q+II TG + +TAWAGAAYNL+L++LASHVLGA WYL SI RQ +CW +VC + C + DC +E P R+ W + + S CD + +++KFG++A+A T V T F +KY YCLWWGL+NLSS GQN+ TS Y+GE +F I I GL+LF LLIGNMQ+ LQS ++R+EEWR+KR DTE+WM HRQLPPEL++ VR++ QYKW+ATRGVDEE +L LPTDLRR+I+RH+CL LVRRVP F QMD+++LDAIC L +L T GT++ REGDPVNEMLF+IRG ++S TTNGGR+GFFNS + PGDFCGEELLTWAL P ++ LPSSTR+V+++SEVEAFAL A+DLKFVA QF+RL SK+L+H FR+YSHQWR W ACF+Q+AWRRYK+RK A EL E+ P E + G +I A++ +A+TRR S S G T+L+ KP EPDFS+D+E Sbjct: 37 RHQILDPDSNIVTYWNHVFLITSILALFLDPFYFYVPYVGGPACLSIDISLAATVTFFRTVADIFHLLHIFMKFRTAFVARSSRVFGRGELVMDSREIAMRYLKTDFLIDVAAMLPLPQLVIWLVIPAATNGTANHANSTLALIVLVQYIPRSFIIFPLNQRIIKTTGFIAKTAWAGAAYNLLLYILASHVLGAMWYLSSIGRQFSCWSNVCKKDNALRVLDCLPSFLDCKSLEQPERQYWQNVTQVLSHCDATSSTTNFKFGMFAEAFTTQVATTDFVSKYLYCLWWGLRNLSSYGQNITTSVYLGETLFCITICIFGLILFTLLIGNMQSSLQSMSVRVEEWRVKRRDTEEWMRHRQLPPELQERVRRFVQYKWLATRGVDEESILHSLPTDLRREIQRHLCLSLVRRVPFFSQMDDQLLDAICGCLVSSLSTAGTYIFREGDPVNEMLFVIRGQIESSTTNGGRSGFFNSTTLRPGDFCGEELLTWALMPNSTLNLPSSTRSVRALSEVEAFALSAEDLKFVAHQFKRLQSKKLQHAFRYYSHQWRAWGACFVQSAWRRYKRRKLAKELSLHESSGYYYPDETGYNEEDEETREYYYGSDEEGGSMDNTNLGATILASKFAANTRRGTNQKASSSSTGKKDGSSTSLKMPQLFKPDEPDFSIDKE 704
BLAST of CL8G029867011.t1_pri vs. DB:SwissProt
Match: CNG16_ARATH (Probable cyclic nucleotide-gated ion channel 16 OS=Arabidopsis thaliana OX=3702 GN=CNGC16 PE=2 SV=1) HSP 1 Score: 707.212 bits (1824), Expect = 0.000e+0 Identity = 327/567 (57.67%), Postives = 428/567 (75.49%), Query Frame = 1 Query: 199 YERVKKKILDPRGPAIRRWNKIFLVACLVSLFVDPLFFYLPVVRH-EVCIDIGIPLEVILTIIRTLGDAFYIIQIYIRFRTAYVAPSSRVFGRGELVIDPSKIASRYLKKGFWIDFVAALPLPQVLIWFIIPN---LRGSTMRNTKNVLRFIIIFQYLPRLFLIFPLSQQIINATGVVTETAWAGAAYNLVLFMLASHVLGACWYLLSIERQEACWRSVCNSE-----KPSCQYGYFDCHKVEDPNRESWFKFSNITSLCDP--NKVSSYKFGIYADAVTFDVTTAPFFNKYFYCLWWGLKNLSSVGQNLATSTYVGEIIFAIIIATLGLVLFALLIGNMQTYLQSTTIRLEEWRIKRTDTEQWMHHRQLPPELRQSVRKYDQYKWVATRGVDEEVLLKGLPTDLRRDIKRHICLDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCRIGPGDFCGEELLTWALDPRPSVILPSSTRTVKSISEVEAFALRADDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQ 1866 + +++ K LDP G I RWN IFL+ CL++LF+DPL+FYLP+V+ C+ I + + +T R L D ++I I ++F+TA+V+ SSRVFGRGELV+D +IA RYLK F ID A LPLPQ++IWF+IPN R + +N + L I++ QY+PR ++ PL+++II ATGV +TAW+GAAYNL+L++L SHVLG+ WY+LSI+RQ CWR C E PSC + DC + DP R++W + + + S CD + ++FG++ DA T DVT++PFF+KYFYCLWWGL+NLSS GQ+LA ST E IF+ I GLV F+ LIGN+Q YLQSTT RL+EWR++R DTE+WM HRQLP EL++ VR++ QYKW+ TRGVDEE +L+ LP DLRR I+RH+CL LVRRVP F QMD+++LDAICERL P+L T+ T+++REGDPVNEMLFIIRG ++S TT+GGR+GFFNS + PGDFCGEELLTWAL P + LP STRTV+++SEVEAFALRA+DLKFVA+QFRRLHSK+L+H FR+YSHQWR W CFIQ Sbjct: 37 FSKLRDKTLDPGGDLITRWNHIFLITCLLALFLDPLYFYLPIVQAGTACMSIDVRFGIFVTCFRNLADLSFLIHILLKFKTAFVSKSSRVFGRGELVMDRREIAIRYLKSEFVIDLAATLPLPQIMIWFVIPNAGEFRYAAHQN--HTLSLIVLIQYVPRFLVMLPLNRRIIKATGVAAKTAWSGAAYNLILYLLVSHVLGSVWYVLSIQRQHECWRRECIKEMNATHSPSCSLLFLDCGSLHDPGRQAWMRITRVLSNCDARNDDDQHFQFGMFGDAFTNDVTSSPFFDKYFYCLWWGLRNLSSYGQSLAASTLSSETIFSCFICVAGLVFFSHLIGNVQNYLQSTTARLDEWRVRRRDTEEWMRHRQLPDELQERVRRFVQYKWLTTRGVDEEAILRALPLDLRRQIQRHLCLALVRRVPFFAQMDDQLLDAICERLVPSLNTKDTYVIREGDPVNEMLFIIRGQMESSTTDGGRSGFFNSITLRPGDFCGEELLTWALVPNINHNLPLSTRTVRTLSEVEAFALRAEDLKFVANQFRRLHSKKLQHAFRYYSHQWRAWGTCFIQ 601 The following BLAST results are available for this feature:
BLAST of CL8G029867011.t1_pri vs. DB:SwissProt
Analysis Date: 2021-12-09 (C. limon v1.0 Primary mRNA blastx SwissProt) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: Citrus limon L. Burm f. genome v1.0 - Primary
Date Performed: 2021-12-07 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >CL8G029867011.t1_pri_Citrus_limon_v1 ID=CL8G029867011.t1_pri_Citrus_limon_v1; Name=CL8G029867011.t1_pri; organism=Citrus limon; type=mRNA; length=2094bpback to top mRNA from alignment at Chr08_pri:15033384..15036363- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=2980bp; location=Sequence derived from: Chr08_pri:15033384..15036363- (Citrus limonback to top Coding sequence (CDS) from alignment at Chr08_pri:15033384..15036363- >CL8G029867011.t1_pri_Citrus_limon_v1 ID=CL8G029867011.t1_pri_Citrus_limon_v1; Name=CL8G029867011.t1_pri; organism=Citrus limon; type=CDS; length=2094bp; location=Sequence derived from: Chr08_pri:15033384..15036363- (Citrus limonback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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