EVM_prediction_chr2.1_tiancheng.1171
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of EVM_prediction_chr2.1_tiancheng.1171 vs. Araport11
Match: | (Symbols: TLP18.3, AtTLP18.3 | thylakoid lumen protein 18.3 | chr1:20439533-20440953 FORWARD LENGTH=285) HSP 1 Score: 396.356 bits (1017), Expect = 7.981e-140 Identity = 214/302 (70.86%), Postives = 246/302 (81.46%), Query Frame = 0 Query: 1 METILSSPSISPFLNPKPSSSKTLFSPSLHAQQQRQSSLFCTKNITCSLKKHNPQLLNPSLQVP--RSWFAHAQQGLAALALSLALSFSPLLYTNGNALASEFDVLTEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLEKWYPSVEEGNNKGIVVLVTSQKEGAVTGGPAFVKAVGEEVLDATISENLPVLATDEKYNEAVYSTAKRLVAAIDGLPDTGGPKFNENKRESNFKTKEETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK* 300 MET+LS ++SP LNPKP S LH + SL +K T S KH L+ P R+W A+QGLAALALSL L+FSP+ G ALASEF++L +GPPK++Y+VDDAGV+S+VTKSDLK+LLSDLE RK +NFITVRKLTSKADAFEYADQVLEKWYPS+EEGNNKGIVVL+TSQKEGA+TGGPAF++AVGE +LDAT+SENLPVLATDEKYNEAVYS+AKRLVAAIDG PD GGP ++KRESNFKTKEET+EKRGQFSLVVGGLLVIAFVVPMAQY+AYVSRK* Sbjct: 1 METLLSPRALSPPLNPKPLS--------LHQTKPTSHSLSLSKPTTFSGPKH----LSTRFTKPESRNWLIDAKQGLAALALSLTLTFSPV----GTALASEFNILNDGPPKETYVVDDAGVLSRVTKSDLKKLLSDLEYRKKLRLNFITVRKLTSKADAFEYADQVLEKWYPSIEEGNNKGIVVLITSQKEGAITGGPAFIEAVGENILDATVSENLPVLATDEKYNEAVYSSAKRLVAAIDGQPDPGGPTVKDSKRESNFKTKEETDEKRGQFSLVVGGLLVIAFVVPMAQYFAYVSRK* 286
BLAST of EVM_prediction_chr2.1_tiancheng.1171 vs. ExPASy Swiss-Prot
Match: U603_ARATH (UPF0603 protein At1g54780, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g54780 PE=1 SV=1) HSP 1 Score: 396.356 bits (1017), Expect = 1.044e-138 Identity = 213/301 (70.76%), Postives = 245/301 (81.40%), Query Frame = 0 Query: 1 METILSSPSISPFLNPKPSSSKTLFSPSLHAQQQRQSSLFCTKNITCSLKKHNPQLLNPSLQVP--RSWFAHAQQGLAALALSLALSFSPLLYTNGNALASEFDVLTEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLEKWYPSVEEGNNKGIVVLVTSQKEGAVTGGPAFVKAVGEEVLDATISENLPVLATDEKYNEAVYSTAKRLVAAIDGLPDTGGPKFNENKRESNFKTKEETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK 299 MET+LS ++SP LNPKP S LH + SL +K T S KH L+ P R+W A+QGLAALALSL L+FSP+ G ALASEF++L +GPPK++Y+VDDAGV+S+VTKSDLK+LLSDLE RK +NFITVRKLTSKADAFEYADQVLEKWYPS+EEGNNKGIVVL+TSQKEGA+TGGPAF++AVGE +LDAT+SENLPVLATDEKYNEAVYS+AKRLVAAIDG PD GGP ++KRESNFKTKEET+EKRGQFSLVVGGLLVIAFVVPMAQY+AYVSRK Sbjct: 1 METLLSPRALSPPLNPKPLS--------LHQTKPTSHSLSLSKPTTFSGPKH----LSTRFTKPESRNWLIDAKQGLAALALSLTLTFSPV----GTALASEFNILNDGPPKETYVVDDAGVLSRVTKSDLKKLLSDLEYRKKLRLNFITVRKLTSKADAFEYADQVLEKWYPSIEEGNNKGIVVLITSQKEGAITGGPAFIEAVGENILDATVSENLPVLATDEKYNEAVYSSAKRLVAAIDGQPDPGGPTVKDSKRESNFKTKEETDEKRGQFSLVVGGLLVIAFVVPMAQYFAYVSRK 285
BLAST of EVM_prediction_chr2.1_tiancheng.1171 vs. ExPASy Swiss-Prot
Match: U603_ORYSJ (UPF0603 protein Os05g0401100, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0401100 PE=3 SV=1) HSP 1 Score: 367.466 bits (942), Expect = 3.647e-127 Identity = 189/263 (71.86%), Postives = 219/263 (83.27%), Query Frame = 0 Query: 45 ITCSLKKHNP--------QLLNPSLQVPRSWFAHAQQGLAALALSLALSFSPLLYTNGNALASEFDVLTEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLEKWYPSVEEGNNKGIVVLVTSQKEGAVTGGPAFVKAVGEEVLDATISENLPVLATDEKYNEAVYSTAKRLVAAIDGLPDTGGPKFNENKRESNFKTKEETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK 299 ++C+L++ P + SW Q GLAA ALSLA+S + A+ASEFDVL GPP+D+Y+VDDAGV+S+VTKSD+K+L+ DLESRKN INFITVRKLTSKADAFEYADQVLEKWYP+VEEGNNKGIVVLVTSQKEGA+TGGPAFV+AVG+E+LD+T+SENLPVLATDEKYNEA+Y+TAKRL AAIDGLPD GGP F +NKRESNFKTKEETEEKRGQF+LVVGGLLVIAFVVPMAQYYAY+S+K Sbjct: 40 VSCALRRQQPPPQAVAAWRGDGGRGGGVGSWATFLQHGLAAAALSLAIS---MAPAPAPAVASEFDVLNGGPPEDTYVVDDAGVLSRVTKSDVKRLVRDLESRKNIRINFITVRKLTSKADAFEYADQVLEKWYPTVEEGNNKGIVVLVTSQKEGAITGGPAFVQAVGDEILDSTVSENLPVLATDEKYNEAIYTTAKRLAAAIDGLPDPGGPTFKDNKRESNFKTKEETEEKRGQFTLVVGGLLVIAFVVPMAQYYAYISKK 299
BLAST of EVM_prediction_chr2.1_tiancheng.1171 vs. ExPASy Swiss-Prot
Match: U603_ORYSI (UPF0603 protein OsI_019212, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_19898 PE=3 SV=2) HSP 1 Score: 367.466 bits (942), Expect = 3.647e-127 Identity = 189/263 (71.86%), Postives = 219/263 (83.27%), Query Frame = 0 Query: 45 ITCSLKKHNP--------QLLNPSLQVPRSWFAHAQQGLAALALSLALSFSPLLYTNGNALASEFDVLTEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLEKWYPSVEEGNNKGIVVLVTSQKEGAVTGGPAFVKAVGEEVLDATISENLPVLATDEKYNEAVYSTAKRLVAAIDGLPDTGGPKFNENKRESNFKTKEETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK 299 ++C+L++ P + SW Q GLAA ALSLA+S + A+ASEFDVL GPP+D+Y+VDDAGV+S+VTKSD+K+L+ DLESRKN INFITVRKLTSKADAFEYADQVLEKWYP+VEEGNNKGIVVLVTSQKEGA+TGGPAFV+AVG+E+LD+T+SENLPVLATDEKYNEA+Y+TAKRL AAIDGLPD GGP F +NKRESNFKTKEETEEKRGQF+LVVGGLLVIAFVVPMAQYYAY+S+K Sbjct: 40 VSCALRRQQPPPQAVAAWRGDGGRGGGVGSWATFLQHGLAAAALSLAIS---MAPAPAPAVASEFDVLNGGPPEDTYVVDDAGVLSRVTKSDVKRLVRDLESRKNIRINFITVRKLTSKADAFEYADQVLEKWYPTVEEGNNKGIVVLVTSQKEGAITGGPAFVQAVGDEILDSTVSENLPVLATDEKYNEAIYTTAKRLAAAIDGLPDPGGPTFKDNKRESNFKTKEETEEKRGQFTLVVGGLLVIAFVVPMAQYYAYISKK 299
BLAST of EVM_prediction_chr2.1_tiancheng.1171 vs. ExPASy TrEMBL
Match: V4SFJ2|V4SFJ2_CITCL (TPM domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10002001mg PE=4 SV=1) HSP 1 Score: 611.683 bits (1576), Expect = 0.000e+0 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0 Query: 1 METILSSPSISPFLNPKPSSSKTLFSPSLHAQQQRQSSLFCTKNITCSLKKHNPQLLNPSLQVPRSWFAHAQQGLAALALSLALSFSPLLYTNGNALASEFDVLTEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLEKWYPSVEEGNNKGIVVLVTSQKEGAVTGGPAFVKAVGEEVLDATISENLPVLATDEKYNEAVYSTAKRLVAAIDGLPDTGGPKFNENKRESNFKTKEETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK 299 METILSSPSISPFLNPKPSSSKTLFSPSLHAQQQRQSSLFCTKNITCSLKKHNPQLLNPSLQVPRSWFAHAQQGLAALALSLALSFSPLLYTNGNALASEFDVLTEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLEKWYPSVEEGNNKGIVVLVTSQKEGAVTGGPAFVKAVGEEVLDATISENLPVLATDEKYNEAVYSTAKRLVAAIDGLPDTGGPKFNENKRESNFKTKEETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK Sbjct: 1 METILSSPSISPFLNPKPSSSKTLFSPSLHAQQQRQSSLFCTKNITCSLKKHNPQLLNPSLQVPRSWFAHAQQGLAALALSLALSFSPLLYTNGNALASEFDVLTEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLEKWYPSVEEGNNKGIVVLVTSQKEGAVTGGPAFVKAVGEEVLDATISENLPVLATDEKYNEAVYSTAKRLVAAIDGLPDTGGPKFNENKRESNFKTKEETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK 299
BLAST of EVM_prediction_chr2.1_tiancheng.1171 vs. ExPASy TrEMBL
Match: A0A067E153|A0A067E153_CITSI (TPM domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g022332mg PE=4 SV=1) HSP 1 Score: 611.683 bits (1576), Expect = 0.000e+0 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0 Query: 1 METILSSPSISPFLNPKPSSSKTLFSPSLHAQQQRQSSLFCTKNITCSLKKHNPQLLNPSLQVPRSWFAHAQQGLAALALSLALSFSPLLYTNGNALASEFDVLTEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLEKWYPSVEEGNNKGIVVLVTSQKEGAVTGGPAFVKAVGEEVLDATISENLPVLATDEKYNEAVYSTAKRLVAAIDGLPDTGGPKFNENKRESNFKTKEETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK 299 METILSSPSISPFLNPKPSSSKTLFSPSLHAQQQRQSSLFCTKNITCSLKKHNPQLLNPSLQVPRSWFAHAQQGLAALALSLALSFSPLLYTNGNALASEFDVLTEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLEKWYPSVEEGNNKGIVVLVTSQKEGAVTGGPAFVKAVGEEVLDATISENLPVLATDEKYNEAVYSTAKRLVAAIDGLPDTGGPKFNENKRESNFKTKEETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK Sbjct: 1 METILSSPSISPFLNPKPSSSKTLFSPSLHAQQQRQSSLFCTKNITCSLKKHNPQLLNPSLQVPRSWFAHAQQGLAALALSLALSFSPLLYTNGNALASEFDVLTEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLEKWYPSVEEGNNKGIVVLVTSQKEGAVTGGPAFVKAVGEEVLDATISENLPVLATDEKYNEAVYSTAKRLVAAIDGLPDTGGPKFNENKRESNFKTKEETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK 299
BLAST of EVM_prediction_chr2.1_tiancheng.1171 vs. ExPASy TrEMBL
Match: A0A2H5QH19|A0A2H5QH19_CITUN (TPM domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_229410 PE=4 SV=1) HSP 1 Score: 605.134 bits (1559), Expect = 0.000e+0 Identity = 295/299 (98.66%), Postives = 297/299 (99.33%), Query Frame = 0 Query: 1 METILSSPSISPFLNPKPSSSKTLFSPSLHAQQQRQSSLFCTKNITCSLKKHNPQLLNPSLQVPRSWFAHAQQGLAALALSLALSFSPLLYTNGNALASEFDVLTEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLEKWYPSVEEGNNKGIVVLVTSQKEGAVTGGPAFVKAVGEEVLDATISENLPVLATDEKYNEAVYSTAKRLVAAIDGLPDTGGPKFNENKRESNFKTKEETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK 299 METILSSPSISPFLNPKPSSSKTLFSPSLHAQQQRQSSLFCTKNITCSLKKHNPQLLNPSLQVPRSWFAHAQQGLAALALSLALSFSPLLYTNGNALASEFDVL EGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLT KADAFEYADQVLEKWYPSVEEGNNKGIVVLVTSQKEGAVTGGPAFVKAVGEEVLDAT++ENLPVLATDEKYNEAVYSTAKRLVAAIDGLPDTGGPKFNENKRESNFKTKEETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK Sbjct: 1 METILSSPSISPFLNPKPSSSKTLFSPSLHAQQQRQSSLFCTKNITCSLKKHNPQLLNPSLQVPRSWFAHAQQGLAALALSLALSFSPLLYTNGNALASEFDVLNEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTIKADAFEYADQVLEKWYPSVEEGNNKGIVVLVTSQKEGAVTGGPAFVKAVGEEVLDATVAENLPVLATDEKYNEAVYSTAKRLVAAIDGLPDTGGPKFNENKRESNFKTKEETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK 299
BLAST of EVM_prediction_chr2.1_tiancheng.1171 vs. ExPASy TrEMBL
Match: A0A5D2EQI4|A0A5D2EQI4_GOSDA (TPM domain-containing protein OS=Gossypium darwinii OX=34276 GN=ES288_A11G307200v1 PE=4 SV=1) HSP 1 Score: 483.797 bits (1244), Expect = 1.687e-170 Identity = 237/299 (79.26%), Postives = 269/299 (89.97%), Query Frame = 0 Query: 1 METILSSPSISPFLNPKPSSSKTLFSPSLHAQQQRQSSLFCTKNITCSLKKHNPQLLNPSLQVPRSWFAHAQQGLAALALSLALSFSPLLYTNGNALASEFDVLTEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLEKWYPSVEEGNNKGIVVLVTSQKEGAVTGGPAFVKAVGEEVLDATISENLPVLATDEKYNEAVYSTAKRLVAAIDGLPDTGGPKFNENKRESNFKTKEETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK 299 METILSS S+ P LNPK S SK L PS QQ R +SLF +K ITC+LKK Q + PSL PR+WF HAQQGL+ALA+SLAL+FSP+LYT GNA+ASEFDV+ EGPPK+SY+VDDA V+S+VTKSDLK+LLSDLESRKNFHINFITVRKLTSKADAFEYADQVLE+WYP++EEG+NKGIVVLVTSQKEGAVTGGPAFV+AVGE +LDAT++ENLPVLAT+EKYNEAVYS+AKRLVAAIDGLPD GGP+ +NKRESNFK++EETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVS+K Sbjct: 1 METILSSHSLHPILNPKASISKNLLLPS---QQPRPASLFLSKPITCTLKKPTSQSVKPSLAEPRNWFVHAQQGLSALAISLALNFSPVLYT-GNAIASEFDVINEGPPKESYVVDDANVLSRVTKSDLKRLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLERWYPTLEEGSNKGIVVLVTSQKEGAVTGGPAFVQAVGENILDATVTENLPVLATEEKYNEAVYSSAKRLVAAIDGLPDPGGPQVKDNKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295
BLAST of EVM_prediction_chr2.1_tiancheng.1171 vs. ExPASy TrEMBL
Match: A0A5J5TYQ5|A0A5J5TYQ5_GOSBA (TPM domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_A11G281200v1 PE=4 SV=1) HSP 1 Score: 483.797 bits (1244), Expect = 1.687e-170 Identity = 237/299 (79.26%), Postives = 269/299 (89.97%), Query Frame = 0 Query: 1 METILSSPSISPFLNPKPSSSKTLFSPSLHAQQQRQSSLFCTKNITCSLKKHNPQLLNPSLQVPRSWFAHAQQGLAALALSLALSFSPLLYTNGNALASEFDVLTEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLEKWYPSVEEGNNKGIVVLVTSQKEGAVTGGPAFVKAVGEEVLDATISENLPVLATDEKYNEAVYSTAKRLVAAIDGLPDTGGPKFNENKRESNFKTKEETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK 299 METILSS S+ P LNPK S SK L PS QQ R +SLF +K ITC+LKK Q + PSL PR+WF HAQQGL+ALA+SLAL+FSP+LYT GNA+ASEFDV+ EGPPK+SY+VDDA V+S+VTKSDLK+LLSDLESRKNFHINFITVRKLTSKADAFEYADQVLE+WYP++EEG+NKGIVVLVTSQKEGAVTGGPAFV+AVGE +LDAT++ENLPVLAT+EKYNEAVYS+AKRLVAAIDGLPD GGP+ +NKRESNFK++EETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVS+K Sbjct: 1 METILSSHSLHPILNPKASISKNLLLPS---QQPRPASLFLSKPITCTLKKPTSQSVKPSLAEPRNWFVHAQQGLSALAISLALNFSPVLYT-GNAIASEFDVINEGPPKESYVVDDANVLSRVTKSDLKRLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLERWYPTLEEGSNKGIVVLVTSQKEGAVTGGPAFVQAVGENILDATVTENLPVLATEEKYNEAVYSSAKRLVAAIDGLPDPGGPQVKDNKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295
BLAST of EVM_prediction_chr2.1_tiancheng.1171 vs. ExPASy TrEMBL
Match: A0A2N9J993|A0A2N9J993_FAGSY (TPM domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29479 PE=4 SV=1) HSP 1 Score: 478.789 bits (1231), Expect = 1.683e-168 Identity = 246/299 (82.27%), Postives = 271/299 (90.64%), Query Frame = 0 Query: 1 METILSSPSISPFLNPKPSSSKTLFSPSLHAQQQRQSSLFCTKNITCSLKKHNPQLLNPSLQVPRSWFAHAQQGLAALALSLALSFSPLLYTNGNALASEFDVLTEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLEKWYPSVEEGNNKGIVVLVTSQKEGAVTGGPAFVKAVGEEVLDATISENLPVLATDEKYNEAVYSTAKRLVAAIDGLPDTGGPKFNENKRESNFKTKEETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK 299 METILS S+SP NPKPSS KTL S SL Q R +SL TK IT SLKKH PQ L PSL +P +WF++AQQGL ALAL+LAL+FSPLL +GNALASEFDVL +GPPK+SY+VDDAGV+S+VT+SDLK LLSDLESRKNFHINF+TVRKLTSKADAFEYADQVLE+WYPSVE+GN+KGIVVLVTSQKEGAVTGGPAFV+AVGE +LDAT+SENLPVLAT+EKYNEAVYS+AKRLVAAIDGLPD GGPKFNENKRESNFKTKEETEEKRGQF+LVVGGLLVIAFVVPMAQYYAYVSRK Sbjct: 1 METILSPHSLSPLFNPKPSSPKTLLSSSL---QPRSNSLSLTKPITSSLKKHKPQSLKPSLPIPTNWFSYAQQGLTALALTLALNFSPLL-PSGNALASEFDVLNQGPPKESYVVDDAGVLSRVTRSDLKSLLSDLESRKNFHINFVTVRKLTSKADAFEYADQVLERWYPSVEDGNDKGIVVLVTSQKEGAVTGGPAFVQAVGESILDATVSENLPVLATEEKYNEAVYSSAKRLVAAIDGLPDPGGPKFNENKRESNFKTKEETEEKRGQFALVVGGLLVIAFVVPMAQYYAYVSRK 295
BLAST of EVM_prediction_chr2.1_tiancheng.1171 vs. ExPASy TrEMBL
Match: A0A6A2XR11|A0A6A2XR11_HIBSY (UPF0603 protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111440pilonHSYRG00077 PE=4 SV=1) HSP 1 Score: 477.248 bits (1227), Expect = 5.889e-168 Identity = 233/300 (77.67%), Postives = 269/300 (89.67%), Query Frame = 0 Query: 1 METILSSPSISPFLNPKPSSSKTLFSPSLHAQQQRQSSLFCTKNITCSLKKHNPQLLNPS-LQVPRSWFAHAQQGLAALALSLALSFSPLLYTNGNALASEFDVLTEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLEKWYPSVEEGNNKGIVVLVTSQKEGAVTGGPAFVKAVGEEVLDATISENLPVLATDEKYNEAVYSTAKRLVAAIDGLPDTGGPKFNENKRESNFKTKEETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK 299 METILSS +I P LNPK S SK L L + Q R + LF +K I C+LKKH Q + PS L P++WFAHAQQG+AALA+SLAL+FSP+L+T GNA+ASEFDV+ EGPPK+SY+VDDA V+S+VTKSDLK+LLSDLESRKNFHINF+TVRKLTSKADAFEYADQVLEKWYP++EEG+NKGIVVLVTSQKEGAVTGGPAFV+AVGE +LDAT++ENLPVLAT+EKYNEA+YS+AKRLVAAIDGLPD GGP+F +NKRESNFK++EETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVS+K Sbjct: 1 METILSSHTIHPTLNPKSSISKNLL---LSSHQPRSTHLFLSKPIACTLKKHASQSVKPSSLAEPKNWFAHAQQGVAALAISLALNFSPVLFT-GNAMASEFDVINEGPPKESYVVDDANVLSRVTKSDLKRLLSDLESRKNFHINFVTVRKLTSKADAFEYADQVLEKWYPTLEEGSNKGIVVLVTSQKEGAVTGGPAFVEAVGENILDATVTENLPVLATEEKYNEAIYSSAKRLVAAIDGLPDPGGPQFKDNKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 296
BLAST of EVM_prediction_chr2.1_tiancheng.1171 vs. ExPASy TrEMBL
Match: A0A6P5YSC8|A0A6P5YSC8_DURZI (UPF0603 protein At1g54780, chloroplastic-like OS=Durio zibethinus OX=66656 GN=LOC111294123 PE=4 SV=1) HSP 1 Score: 474.552 bits (1220), Expect = 6.758e-167 Identity = 242/299 (80.94%), Postives = 270/299 (90.30%), Query Frame = 0 Query: 1 METILSSPSISPFLNPKPSSSKTLFSPSLHAQQQRQSSLFCTKNITCSLKKHNPQLLNPSLQVPRSWFAHAQQGLAALALSLALSFSPLLYTNGNALASEFDVLTEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLEKWYPSVEEGNNKGIVVLVTSQKEGAVTGGPAFVKAVGEEVLDATISENLPVLATDEKYNEAVYSTAKRLVAAIDGLPDTGGPKFNENKRESNFKTKEETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK 299 METILSS S+SP LNPK S+SK L SPSL Q R +SLF +K TCS KKH Q L PSL P++WF HAQ+GLAALA+SLAL+FSP+LY GNALASEFDV+ EGPPKDSY+VDDA V+S++TKSDLKQLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLE+WYP++EEG+NKGIVVLVTSQKEGAVTGGPAFV+AVGE +LDAT+SENLPVLAT+EKYNEA+YS+AKRLVAAIDGLPD GGP F ENKRESNFK++EETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVS+K Sbjct: 1 METILSSHSLSPILNPKASTSKNLLSPSL---QPRPASLFLSKPFTCSRKKHTSQSLRPSLTEPKNWFVHAQKGLAALAISLALNFSPVLYI-GNALASEFDVINEGPPKDSYVVDDANVLSRLTKSDLKQLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLERWYPTLEEGSNKGIVVLVTSQKEGAVTGGPAFVEAVGENILDATVSENLPVLATEEKYNEAIYSSAKRLVAAIDGLPDPGGPMFKENKRESNFKSREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295
BLAST of EVM_prediction_chr2.1_tiancheng.1171 vs. ExPASy TrEMBL
Match: A0A6P5WU25|A0A6P5WU25_DURZI (UPF0603 protein At1g54780, chloroplastic-like OS=Durio zibethinus OX=66656 GN=LOC111277270 PE=4 SV=1) HSP 1 Score: 473.011 bits (1216), Expect = 2.331e-166 Identity = 243/299 (81.27%), Postives = 269/299 (89.97%), Query Frame = 0 Query: 1 METILSSPSISPFLNPKPSSSKTLFSPSLHAQQQRQSSLFCTKNITCSLKKHNPQLLNPSLQVPRSWFAHAQQGLAALALSLALSFSPLLYTNGNALASEFDVLTEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLEKWYPSVEEGNNKGIVVLVTSQKEGAVTGGPAFVKAVGEEVLDATISENLPVLATDEKYNEAVYSTAKRLVAAIDGLPDTGGPKFNENKRESNFKTKEETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK 299 M TILSS +SP LNPK S SK L SPSLH+ R +SLF +K TCSLKKH Q L PSL P++WF HAQQGLAALA+SLAL+FSP+LYT GNALASEFDV+ EGPPKDSY+VDDA V+S+VTKSDLKQLLSDLESRKNFHI FITVRKLTSKADAFEYADQVLE+WYP++EEG+NKGIVVLVTSQKEGAVTGGP FV+AVGE +LDAT+SENLPVLAT+EKYNEA+YS+AKRLVAAIDGLPDTGGPK +NKRESNFKT+EETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVS+K Sbjct: 1 MVTILSSHPLSPILNPKASISKNLLSPSLHS---RPTSLFLSKPFTCSLKKHASQSLKPSLAEPKNWFVHAQQGLAALAISLALNFSPVLYT-GNALASEFDVINEGPPKDSYVVDDANVLSRVTKSDLKQLLSDLESRKNFHIIFITVRKLTSKADAFEYADQVLERWYPTLEEGSNKGIVVLVTSQKEGAVTGGPPFVEAVGENILDATVSENLPVLATEEKYNEAIYSSAKRLVAAIDGLPDTGGPKVKDNKRESNFKTREETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSKK 295
BLAST of EVM_prediction_chr2.1_tiancheng.1171 vs. ExPASy TrEMBL
Match: A0A067JHX5|A0A067JHX5_JATCU (TPM domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_23384 PE=4 SV=1) HSP 1 Score: 473.011 bits (1216), Expect = 2.409e-166 Identity = 240/299 (80.27%), Postives = 265/299 (88.63%), Query Frame = 0 Query: 1 METILSSPSISPFLNPKPSSSKTLFSPSLHAQQQRQSSLFCTKNITCSLKKHNPQLLNPSLQVPRSWFAHAQQGLAALALSLALSFSPLLYTNGNALASEFDVLTEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLEKWYPSVEEGNNKGIVVLVTSQKEGAVTGGPAFVKAVGEEVLDATISENLPVLATDEKYNEAVYSTAKRLVAAIDGLPDTGGPKFNENKRESNFKTKEETEEKRGQFSLVVGGLLVIAFVVPMAQYYAYVSRK 299 MET+LSS S+SP NPK S +KT P L Q R +SL +K ITCSLKK NPQ P LQ+PR+W HAQQGL ALA+SLAL+FSPLLYT GN LASEFDV+ EGPPKDSY+VDDAGV+SKVTKSDLKQLLSDLE+RKNF INF+TVRKLTSKADAFEYADQ+LEKWYP+VEEGNNKGIVVLVTSQKEGAVTGGPAFV+AVGE VLD+T+SENLPVLAT+EKYNEAV ++AKRL AAIDGLPD GGPKF +NKRESNFKT+EETEEKRGQF+LVVGGLLVIAFVVPMAQYYAYVSRK Sbjct: 1 METLLSSHSLSPLFNPKSSFAKTHLPPQL---QSRPNSLSLSKTITCSLKKQNPQSCTPFLQIPRNWVTHAQQGLTALAISLALNFSPLLYT-GNGLASEFDVINEGPPKDSYVVDDAGVLSKVTKSDLKQLLSDLEARKNFKINFVTVRKLTSKADAFEYADQILEKWYPTVEEGNNKGIVVLVTSQKEGAVTGGPAFVQAVGESVLDSTVSENLPVLATEEKYNEAVVTSAKRLAAAIDGLPDPGGPKFMDNKRESNFKTREETEEKRGQFALVVGGLLVIAFVVPMAQYYAYVSRK 295 The following BLAST results are available for this feature:
BLAST of EVM_prediction_chr2.1_tiancheng.1171 vs. Araport11
Analysis Date: 2023-08-23 (Blastp of Citrus sinensis cv. Newhall v1.0 proteins vs Araport11) Total hits: 1 Position : 0 Zoom : x 1
BLAST of EVM_prediction_chr2.1_tiancheng.1171 vs. ExPASy Swiss-Prot
Analysis Date: 2023-08-23 (Blastp of Citrus sinensis cv. Newhall v1.0 proteins vs UniProt Swissprot) Total hits: 3 Position : 0 Zoom : x 1
BLAST of EVM_prediction_chr2.1_tiancheng.1171 vs. ExPASy TrEMBL
Analysis Date: 2023-08-23 (Blastp of Citrus sinensis cv. Newhall v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus sinensis cv. Newhall v1.0 proteins
Date Performed: 2023-08-08 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >evm.model.chr2.1_tiancheng.1171_cs-GNU_v1 ID=evm.model.chr2.1_tiancheng.1171_cs-GNU_v1; Name=EVM_prediction_chr2.1_tiancheng.1171; organism=Citrus sinensis; type=mRNA; length=900bpback to top protein sequence of evm.model.chr2.1_tiancheng.1171_cs-GNU_v1 >evm.model.chr2.1_tiancheng.1171_cs-GNU_v1 ID=evm.model.chr2.1_tiancheng.1171_cs-GNU_v1; Name=evm.model.chr2.1_tiancheng.1171_cs-GNU_v1; organism=Citrus sinensis; type=polypeptide; length=300bpback to top mRNA from alignment at chr2.1_tiancheng:26105737..26107616- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=1880bp; location=Sequence derived from: chr2.1_tiancheng:26105737..26107616- (Citrus sinensisback to top Coding sequence (CDS) from alignment at chr2.1_tiancheng:26105737..26107616- >evm.model.chr2.1_tiancheng.1171_cs-GNU_v1 ID=evm.model.chr2.1_tiancheng.1171_cs-GNU_v1; Name=EVM_prediction_chr2.1_tiancheng.1171; organism=Citrus sinensis; type=CDS; length=900bp; location=Sequence derived from: chr2.1_tiancheng:26105737..26107616- (Citrus sinensisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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