EVM_prediction_chr2.1_tiancheng.970
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of EVM_prediction_chr2.1_tiancheng.970 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:21473887-21476939 REVERSE LENGTH=948) HSP 1 Score: 154.451 bits (389), Expect = 2.184e-42 Identity = 83/195 (42.56%), Postives = 119/195 (61.03%), Query Frame = 0 Query: 1 MRKLVHDCAWDPVICCDSVN--DGKILDGYACIKLSLVVLFSPIVESMKFLSEFLDVDVSDECLTNVGSFKSKFSALFESVNDAYCSKNIHFSWVNIK-----CNLGLELESSSDASVNDFGEKLGFFERGIRDMGWGFCSSDSLVLGSSLVHFGLIYPIIGVSSCLFGSNNNYCKATLSLEILDVSGKPLECKC 188 +R++V+D AW+PV+ + G G ++ +LVV+FSPI + ++SEFLDV DEC +++ FKSK +F VN+ + ++I SW+++K C LGL K GFF+ GIR++GWG CS+DS+V GSS+V FGLIYP IG+S L S +A SLEI D++GKP+ECKC Sbjct: 126 LRQIVYDYAWEPVVRDPEIGMIPGFTDGGLDVVRSNLVVMFSPISRDLDWVSEFLDVKSGDECFSDLDLFKSKLREIFYCVNELFDDRDIQLSWIDVKSGDERCELGL---------------KSGFFDSGIRELGWGHCSTDSIVFGSSVVPFGLIYPAIGISPKLSTSQKFTLQA--SLEIADINGKPMECKC 303
BLAST of EVM_prediction_chr2.1_tiancheng.970 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:21474774-21476939 REVERSE LENGTH=721) HSP 1 Score: 153.68 bits (387), Expect = 2.636e-42 Identity = 83/195 (42.56%), Postives = 119/195 (61.03%), Query Frame = 0 Query: 1 MRKLVHDCAWDPVICCDSVN--DGKILDGYACIKLSLVVLFSPIVESMKFLSEFLDVDVSDECLTNVGSFKSKFSALFESVNDAYCSKNIHFSWVNIK-----CNLGLELESSSDASVNDFGEKLGFFERGIRDMGWGFCSSDSLVLGSSLVHFGLIYPIIGVSSCLFGSNNNYCKATLSLEILDVSGKPLECKC 188 +R++V+D AW+PV+ + G G ++ +LVV+FSPI + ++SEFLDV DEC +++ FKSK +F VN+ + ++I SW+++K C LGL K GFF+ GIR++GWG CS+DS+V GSS+V FGLIYP IG+S L S +A SLEI D++GKP+ECKC Sbjct: 126 LRQIVYDYAWEPVVRDPEIGMIPGFTDGGLDVVRSNLVVMFSPISRDLDWVSEFLDVKSGDECFSDLDLFKSKLREIFYCVNELFDDRDIQLSWIDVKSGDERCELGL---------------KSGFFDSGIRELGWGHCSTDSIVFGSSVVPFGLIYPAIGISPKLSTSQKFTLQA--SLEIADINGKPMECKC 303
BLAST of EVM_prediction_chr2.1_tiancheng.970 vs. ExPASy TrEMBL
Match: A0A067EY67|A0A067EY67_CITSI (Treslin N-terminal domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g043867mg PE=4 SV=1) HSP 1 Score: 439.113 bits (1128), Expect = 7.263e-145 Identity = 215/238 (90.34%), Postives = 225/238 (94.54%), Query Frame = 0 Query: 1 MRKLVHDCAWDPVICCDSVNDGKILDGYACIKLSLVVLFSPIVESMKFLSEFLDVDVSDECLTNVGSFKSKFSALFESVNDAYCSKNIHFSWVNIKCNLGLELESSSDASVNDFGEKLGFFERGIRDMGWGFCSSDSLVLGSSLVHFGLIYPIIGVSSCLFGSNNNYCKATLSLEILDVSGKPLECKCCELKLFNMGKNRFWGLFGDGIIKLRVTAVYRCKEAVKFEGMLMHPILVPE 238 MR+LVHD AWDPVICCDSVNDGKILDG ACIK SLVVLFSPIVES+KFLSEFLDVDVSDECLTNVG FKSKFSALFESVNDAYCSK+IHFSWVN+KC+LGLELESSSDAS NDFGEK+GFFE GIRDMGWG CSSDSLVLGSSLVHFGLIYPIIGVSSCL SNN+YC+ATLSLEILDVSGKPLECKCCELKLFN+GKNRFWGLFGDGIIKL VTAVYR +EAVKFEGMLM PILV E Sbjct: 118 MRQLVHDYAWDPVICCDSVNDGKILDGPACIKSSLVVLFSPIVESIKFLSEFLDVDVSDECLTNVGLFKSKFSALFESVNDAYCSKDIHFSWVNVKCDLGLELESSSDASANDFGEKIGFFECGIRDMGWGLCSSDSLVLGSSLVHFGLIYPIIGVSSCLLDSNNDYCEATLSLEILDVSGKPLECKCCELKLFNIGKNRFWGLFGDGIIKLCVTAVYRYEEAVKFEGMLMDPILVRE 355
BLAST of EVM_prediction_chr2.1_tiancheng.970 vs. ExPASy TrEMBL
Match: A0A5C7IP96|A0A5C7IP96_9ROSI (Treslin N-terminal domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_006026 PE=4 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 2.961e-75 Identity = 142/248 (57.26%), Postives = 174/248 (70.16%), Query Frame = 0 Query: 1 MRKLVHDCAWDPVIC-CDSVNDGKILDG---YACIKLSLVVLFSPIVESMKFLSEFLDVDVSDECLTNVGSFKSKFSALFESVNDAYCSKNIHFSWVNIKCNLGLELESSSDASVNDFGEKLGFFERGIRDMGWGFCSSDSLVLGSSLVHFGLIYPIIGVSSCLFGSNNNYCK---ATLSLEILDVSGKPLECKCCELKLFNMG---KNRFWGLFGDGIIKLRVTAVYRCKEAVKFEGMLMHPILVPE 238 MR+LVHD WDPVIC C++ G D A ++ +LVVLFSPIV+S F+ FLDVDV DECL + G F ++F LFESVNDA+ +IHFSWV++KC E ESS N K GFFE GIR +GWGFCSSDS+VLGS LV+FGLIYP IG+SS LF N+ K A L+LEILDVSGKPLECKCC+L+L N+ ++RF G F DG IKL+V +VY+ +E +KFEG L +PILV E Sbjct: 127 MRQLVHDYTWDPVICDCEAGATGGDYDPGNVSAFLRSNLVVLFSPIVKSFDFMCGFLDVDVDDECLRDEGLFNNRFRGLFESVNDAFIRNDIHFSWVDVKC----EFESSDG---NQIEVKSGFFESGIRGLGWGFCSSDSIVLGSVLVNFGLIYPRIGISSRLFDCNSENSKTNHAQLNLEILDVSGKPLECKCCDLELINLDIFKRDRFLGHFVDGTIKLQVKSVYKREEGLKFEGQLSNPILVRE 367
BLAST of EVM_prediction_chr2.1_tiancheng.970 vs. ExPASy TrEMBL
Match: A0A6A6MSV8|A0A6A6MSV8_HEVBR (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_039979 PE=4 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 2.124e-63 Identity = 128/262 (48.85%), Postives = 162/262 (61.83%), Query Frame = 0 Query: 1 MRKLVHDCAWDPVICCDSVNDGKILDGYACIKLSLVVLFSPIVESMKFLSEFLDVDVSDECLTNVGSFKSKFSALFESVNDAYCSKNIHFSWVNIKCNLGLELESSSDASVNDFGEK---LGFFERGIRDMGWGFCSSDSLVLGSSLVHFGLIYPIIGVSSCLFGSNNNY--CKATLSLEILDVSGKPLECKCCELKLFNMG-------------------KNRFWGLFGDGIIKLRVTAVYRCKEAVKFEGMLMHPILVPE 238 MR+LVHD AWD VIC DS+ G + + + +K +LVVLFSPI+ S+K LSEF V++SDECL NV KF FESVN+A+ S++IHFSWV++K E++ A DF E GFFE GIRD+GWGFCSS+S+VLGS+LV FGLIYP IG+S L +++Y A LSLEILDVS KPLECKCC+++L N+ K W G+ KL V AV + + V EG L PI V E Sbjct: 1 MRQLVHDYAWDSVIC-DSLA-GTLSNCDSFVKSNLVVLFSPIISSLKCLSEFFSVEMSDECLRNVDGLIKKFRESFESVNEAFISRDIHFSWVDVK------YETACAAYKGDFEEPELVYGFFESGIRDLGWGFCSSESIVLGSALVPFGLIYPRIGISPRLINLDDSYQAINAQLSLEILDVSEKPLECKCCDIELVNLNWFSGISPKFTDPQTYSFEQKKMVWRNLSHGMTKLHVKAVKKHVKCVNLEGFLSDPIFVRE 254
BLAST of EVM_prediction_chr2.1_tiancheng.970 vs. ExPASy TrEMBL
Match: A0A7N2MHD9|A0A7N2MHD9_QUELO (LIM domain protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 3.108e-63 Identity = 131/262 (50.00%), Postives = 168/262 (64.12%), Query Frame = 0 Query: 1 MRKLVHDCAWDPVICCDSVNDGKILDGYACIKLS-LVVLFSPIVESMKFLSEFLDVDVSDECLTNVGSFKSKFSALFESVNDAYCSKNIHFSWVNIKCNL-GLELESSSDASVNDFGEKLGFFERGIRDMGWGFCSSDSLVLGSSLVHFGLIYPIIGVSSCLFGSNNNYCK---ATLSLEILDVSGKPLECKCCELKLFNMG---------------------KNRFWGLFGDGIIKLRVTAVYRCKEAVKFEGMLMHPILV 236 MR+LVHD AWDPV D G +L+ + + S LVVLFSP+ +K LSEFL+V V DECL NV +F KF LFE+VNDAY S++I FSWV+++ L G+E + +++ K GFF GIR +GWGFCS+DS+VLGS+LV FGLIYP I +SS +F +++ CK A LSLEILDVSGKPLECKCC+L+L N+ KN FW LFGDG+IKL + AV R E KF G L +++ Sbjct: 141 MRQLVHDYAWDPV--ADDSTTGTLLNNDSLVVGSNLVVLFSPVCRCVKSLSEFLNVGVEDECLENVDAFCEKFCGLFENVNDAYVSRDIRFSWVDVRYELDGVE----NKIEIDESKLKFGFFASGIRSLGWGFCSTDSIVLGSALVPFGLIYPKIAISSKVFDYSDS-CKTLNAQLSLEILDVSGKPLECKCCDLQLVNLKMSPRNRSKDLMFTPDVVGCERKNSFWELFGDGLIKLHIKAVQRYVECGKFVGHLAENLVL 395
BLAST of EVM_prediction_chr2.1_tiancheng.970 vs. ExPASy TrEMBL
Match: A0A7J7CAP3|A0A7J7CAP3_TRIWF (LIM domain-containing protein A OS=Tripterygium wilfordii OX=458696 GN=HS088_TW19G00824 PE=4 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 4.406e-60 Identity = 119/269 (44.24%), Postives = 162/269 (60.22%), Query Frame = 0 Query: 1 MRKLVHDCAWDPVICCDSVNDGKILDG---YACIKLSLVVLFSPIVESMKFLSEFLDVDVSDECLTNVGSFKSKFSALFESVNDAYCSKNIHFSWVNIKCNLGLELESSSDASVNDFGEKLGFFERGIRDMGWGFCSSDSLVLGSSLVHFGLIYPIIGVSSCLFGSN--NNYCKATLSLEILDVSGKPLECKCCELKLFNM--------------------------GKNRFWGLFGDGIIKLRVTAVYRCKEAVKFEGMLMHPILVPE 238 MR+L+HD AWDP+I D ++ G + D +A ++ +LVVLFSP+ + K++ EFL++D ++E + + +F +F FE VNDA+ S++IH SWV++KC L E + G F+ GIRD+GWGFCSS VLGS+LV FGLIYP++GVSSC G N N + LSLEILDV+GKPL+CKCC+++LF++ K FW +F GI KL V AV R E VKFEG + PILV E Sbjct: 124 MRQLLHDYAWDPMIR-DDLDTGTLSDSDSDFAVVRSNLVVLFSPVCKDRKWVCEFLELDDAEEYVDSGNTFNKRFCGFFECVNDAFVSRDIHVSWVDVKCELDCSEEEC----------QTGIFQSGIRDLGWGFCSSTLFVLGSALVPFGLIYPLLGVSSCFSGFNECNKRIQGQLSLEILDVNGKPLKCKCCDIELFDLKALSRNSSPDPSHVLEFVSSQTGNDKQKKTFWEVFDGGIAKLHVKAVKRYAEPVKFEGHFLDPILVRE 381
BLAST of EVM_prediction_chr2.1_tiancheng.970 vs. ExPASy TrEMBL
Match: A0A2N9GBX5|A0A2N9GBX5_FAGSY (Treslin N-terminal domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24945 PE=4 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 4.981e-60 Identity = 122/256 (47.66%), Postives = 159/256 (62.11%), Query Frame = 0 Query: 1 MRKLVHDCAWDPVICCDSVNDGKILDGYACIKLSLVVLFSPIVESMKFLSEFLDVDVSDECLTNVGSFKSKFSALFESVNDAYCSKNIHFSWVNIKCNLGLELESSSDASVNDFGEKLGFFERGIRDMGWGFCSSDSLVLGSSLVHFGLIYPIIGVSSCL--FGSNNNYCKATLSLEILDVSGKPLECKCCELKLFN---MGKNR-----------------------FWGLFGDGIIKLRVTAVYRCKEAVKFEG 228 MR+LVHD AWDPV+ DS+ + + + +LVVLFSP+ S+K LS+FL+V + D CL NV +F KF FE+VN AY S++I FSWV++ LG + +++ K GFF GIR +GWGFCS++S+VLGS+LV FGLIYP I +SS + FG + A LSLEILDV+GKPLECKCC+LK+ N + +NR FWGLFGDG+IKL + AV R E VKF G Sbjct: 145 MRQLVHDYAWDPVVD-DSITGTLLNNDSVVVGSNLVVLFSPVCRSIKCLSDFLNVGIDDGCLENVDAFCEKFRGFFENVNGAYVSRDIRFSWVDVSYELG---GVENKVEIDESKLKFGFFGSGIRSLGWGFCSTNSIVLGSALVPFGLIYPKIAISSKVFHFGDSCKTVNAQLSLEILDVTGKPLECKCCDLKMVNLKMLPRNRSKDFLFTPDVMNLQALGCEEKKSFWGLFGDGLIKLHIKAVQRYVECVKFVG 396
BLAST of EVM_prediction_chr2.1_tiancheng.970 vs. ExPASy TrEMBL
Match: A0A2P5C9M5|A0A2P5C9M5_PARAD (Treslin OS=Parasponia andersonii OX=3476 GN=PanWU01x14_171280 PE=4 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 2.750e-59 Identity = 125/268 (46.64%), Postives = 165/268 (61.57%), Query Frame = 0 Query: 1 MRKLVHDCAWDPVICCDSVNDGKILD-GYACIKLSLVVLFSPIVESMKFLSEFLDVDVSDECLTNVGSFKSKFSALFESVNDAYCSKNIHFSWVNIKCNLGLELESSSDASVNDFGEKLGFFERGIRDMGWGFCSSDSLVLGSSLVHFGLIYPIIGVSSCLFGSNN--NYCKATLSLEILDVSGKPLECKCCELKLFNMG---KNR------------------------FWGLFGDGIIKLRVTAVYRCKEAVKFEGMLMHPILVPE 238 MR+LVHD AWDP+I D V G +L+ +K +LVVLFSP S+K LSEFL+V++ D CL NV SF +F F +VNDA+ S++I FSWVN++ +G + + + D S F FFE GIR++GWGFCS +S+VLGS+LV FGLIYP +G+S F N+ + + LSLEILDV+ KPLECKCC+L+L N+ +NR WG FGDG+ KL+V + R KF+G L HPILV E Sbjct: 130 MRQLVHDYAWDPIIQ-DPVT-GTLLNCDSVVVKSNLVVLFSPFCGSVKSLSEFLNVEIDDVCLENVNSFCERFCGFFSNVNDAFVSRDIQFSWVNVQYQMGDDRKVAIDGSELRF----KFFENGIRNLGWGFCSINSIVLGSALVPFGLIYPRVGISPDNFDCNDCVSKFRVQLSLEILDVAQKPLECKCCDLELVNLKLWPRNRSDNDVLHIPEIMNKWKGGNELNEKLWGSFGDGVNKLQVKTLQRYNVLKKFKGHLSHPILVRE 391
BLAST of EVM_prediction_chr2.1_tiancheng.970 vs. ExPASy TrEMBL
Match: A0A8J4R639|A0A8J4R639_9ROSI (Uncharacterized protein OS=Castanea mollissima OX=60419 GN=CMV_014883 PE=4 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 3.859e-59 Identity = 123/260 (47.31%), Postives = 161/260 (61.92%), Query Frame = 0 Query: 1 MRKLVHDCAWDPVICCDSVNDGKILDGYACIKLSLVVLFSPIVESMKFLSEFLDVDVSDECLTNVGSFKSKFSALFESVNDAYCSKNIHFSWVNIKCNL-GLELESSSDASVNDFGEKLGFFERGIRDMGWGFCSSDSLVLGSSLVHFGLIYPIIGVSSCLF--GSNNNYCKATLSLEILDVSGKPLECKCCELKLFNMG---------------------KNRFWGLFGDGIIKLRVTAVYRCKEAVKFEGMLMHPILV 236 MR+LVHD AWDPV+ DS+ + + + +LVVLFSP+ +K LSEFL+V V DECL NV F KF FE+VNDAY S++I FSWV+++ L G+E + +++ K GFF G+R +GWGFCS+DS+VLGS+LV FGLIYP I +SS +F + A LSLEILDVSGK LECKCC+L+L N+ KN F LFGDG+IKL + AV R E KF G L+ +++ Sbjct: 137 MRQLVHDYAWDPVVD-DSITGTLLNNDSLVVGSNLVVLFSPVCRCIKSLSEFLNVGVEDECLENVDVFCEKFRGFFENVNDAYVSRDIRFSWVDVRYELDGVE----NKVEIDESKLKCGFFASGVRSLGWGFCSTDSIVLGSALVPFGLIYPKIAISSKVFDYSDSRKTLNAQLSLEILDVSGKSLECKCCDLQLVNLKMSPRNRSKDLLFTPDVVGCEWKNSFGELFGDGLIKLHIKAVQRYVECGKFVGHLVENLVL 391
BLAST of EVM_prediction_chr2.1_tiancheng.970 vs. ExPASy TrEMBL
Match: W9RGA1|W9RGA1_9ROSA (Treslin N-terminal domain-containing protein OS=Morus notabilis OX=981085 GN=L484_000762 PE=4 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.852e-58 Identity = 120/268 (44.78%), Postives = 162/268 (60.45%), Query Frame = 0 Query: 1 MRKLVHDCAWDPVICCDSVNDGKILD-GYACIKLSLVVLFSPIVESMKFLSEFLDVDVSDECLTNVGSFKSKFSALFESVNDAYCSKNIHFSWVNIKCNLGLELESSSDASVNDFGEKLGFFERGIRDMGWGFCSSDSLVLGSSLVHFGLIYPIIGVSSCLFGSNN--NYCKATLSLEILDVSGKPLECKCCELKLFNM-----------------------GKN----RFWGLFGDGIIKLRVTAVYRCKEAVKFEGMLMHPILVPE 238 MR+LVHD AWDPVI G +L+ G ++ +LVVLFSPI S+K+LSE LDV + D+CL +V SF +F F SVNDA+ S++I FSWVN++ + + +++ + FFE GIR++GWGFCSSDS+VLGS+LV FGLIYP IG+S N+ LSLEILDV+ KPLECKCC+L+L ++ G+N + WG FG G+ KL+V A++R + K +G L PILV E Sbjct: 125 MRQLVHDYAWDPVIQGPVT--GTLLNSGSVLVRSNLVVLFSPIPASLKYLSELLDVGIDDDCLGDVSSFCERFCGFFASVNDAFVSRDIQFSWVNVRVD-----DDYDKFEIDESELRSEFFESGIRNLGWGFCSSDSIVLGSALVPFGLIYPKIGISPNGLSCNDCSKKLHVQLSLEILDVAQKPLECKCCDLELVDLKLSPVNRSDNGVFCIPEIMNTHKGRNELKEKLWGSFGGGVSKLQVKALHRNNDFKKLKGHLSDPILVRE 385
BLAST of EVM_prediction_chr2.1_tiancheng.970 vs. ExPASy TrEMBL
Match: A0A2P6SNM4|A0A2P6SNM4_ROSCH (Putative treslin OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0379731 PE=4 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 7.554e-58 Identity = 117/267 (43.82%), Postives = 160/267 (59.93%), Query Frame = 0 Query: 1 MRKLVHDCAWDPVICCDSVNDGKILDGYACIKLSLVVLFSPIVE---SMKFLSEFLDVDVSDECLTNVGSFKSKFSALFESVNDAYCSKNIHFSWVNIKCNLGLELESSSDASVNDFGEKLGFFERGIRDMGWGFCSSDSLVLGSSLVHFGLIYPIIGVSSCLFGSNNNYCKATLSLEILDVSGKPLECKCCELKLFNMG--------------------------KNRFWGLFGDGIIKLRVTAVYRCKEAVKFEGMLMHPILVPE 238 MR+LVHD AWD IC + ++ +LVVLFSP+ S+KF+SEFL+V V DECL ++ +F +F +FE+V++A+ S++I SWV+++ L + N+ G K GFFERGIR +GWGFCSSDS+VLGS+LV FGLIYP IGVSS +FG ++ + LSL I DV G PLECK C+L+L + K FWG G+G+ K++V A+ + E+VKF+G L PILV E Sbjct: 1 MRQLVHDYAWDAPICDPATG---TFSNCGALRSNLVVLFSPVSPVCGSLKFVSEFLNVGVGDECLEDLNAFCERFRRVFENVDEAFGSRDIQLSWVDVRYEL--------ECGENEVGLKCGFFERGIRSLGWGFCSSDSIVLGSALVPFGLIYPEIGVSSKIFGDHSKKVRGQLSLGISDVMGMPLECKFCDLELAELKMLPRSRADDGLFSVESMKSQTRGHEVKRLFWGSVGNGVSKIQVKALQKDSESVKFKGRLSDPILVYE 256 The following BLAST results are available for this feature:
BLAST of EVM_prediction_chr2.1_tiancheng.970 vs. Araport11
Analysis Date: 2023-08-23 (Blastp of Citrus sinensis cv. Newhall v1.0 proteins vs Araport11) Total hits: 2 Position : 0 Zoom : x 1
BLAST of EVM_prediction_chr2.1_tiancheng.970 vs. Araport11
Analysis Date: 2023-08-23 (Blastp of Citrus sinensis cv. Newhall v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of EVM_prediction_chr2.1_tiancheng.970 vs. ExPASy TrEMBL
Analysis Date: 2023-08-23 (Blastp of Citrus sinensis cv. Newhall v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus sinensis cv. Newhall v1.0 proteins
Date Performed: 2023-08-08 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >evm.model.chr2.1_tiancheng.970_cs-GNU_v1 ID=evm.model.chr2.1_tiancheng.970_cs-GNU_v1; Name=EVM_prediction_chr2.1_tiancheng.970; organism=Citrus sinensis; type=mRNA; length=771bpback to top protein sequence of evm.model.chr2.1_tiancheng.970_cs-GNU_v1 >evm.model.chr2.1_tiancheng.970_cs-GNU_v1 ID=evm.model.chr2.1_tiancheng.970_cs-GNU_v1; Name=evm.model.chr2.1_tiancheng.970_cs-GNU_v1; organism=Citrus sinensis; type=polypeptide; length=257bpback to top mRNA from alignment at chr2.1_tiancheng:22667812..22668582- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=771bp; location=Sequence derived from: chr2.1_tiancheng:22667812..22668582- (Citrus sinensisback to top Coding sequence (CDS) from alignment at chr2.1_tiancheng:22667812..22668582- >evm.model.chr2.1_tiancheng.970_cs-GNU_v1 ID=evm.model.chr2.1_tiancheng.970_cs-GNU_v1; Name=EVM_prediction_chr2.1_tiancheng.970; organism=Citrus sinensis; type=CDS; length=771bp; location=Sequence derived from: chr2.1_tiancheng:22667812..22668582- (Citrus sinensisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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