EVM_prediction_chr2.1_tiancheng.1714
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs
Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:29447317-29450181 FORWARD LENGTH=287) HSP 1 Score: 119.013 bits (297), Expect = 3.608e-31 Identity = 51/57 (89.47%), Postives = 56/57 (98.25%), Query Frame = 0 Query: 5 HYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF 61 +YRS FGDTT+TKVFVGGLAWETPT+EMRRYFEQFG+ILEAVII+DKNTGKSKGYGF Sbjct: 6 YYRSPFGDTTYTKVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYGF 62
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:29447317-29449246 FORWARD LENGTH=271) HSP 1 Score: 117.087 bits (292), Expect = 1.304e-30 Identity = 51/57 (89.47%), Postives = 56/57 (98.25%), Query Frame = 0 Query: 5 HYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF 61 +YRS FGDTT+TKVFVGGLAWETPT+EMRRYFEQFG+ILEAVII+DKNTGKSKGYGF Sbjct: 6 YYRSPFGDTTYTKVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYGF 62
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:7886693-7889241 FORWARD LENGTH=291) HSP 1 Score: 112.464 bits (280), Expect = 1.065e-28 Identity = 49/57 (85.96%), Postives = 54/57 (94.74%), Query Frame = 0 Query: 5 HYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF 61 +YRS FGDTT TKVFVGGLAWETPT+EMRRYF+QFG+ILEAVII+DK TGKSKGYGF Sbjct: 6 YYRSPFGDTTHTKVFVGGLAWETPTDEMRRYFDQFGEILEAVIITDKATGKSKGYGF 62
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:7262879-7264834 REVERSE LENGTH=274) HSP 1 Score: 101.293 bits (251), Expect = 1.208e-24 Identity = 49/90 (54.44%), Postives = 60/90 (66.67%), Query Frame = 0 Query: 8 SQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGFEEIK---------VAIFLIINNREVRHHTVELQHHR 88 S FGDTTFTKVFVGGLAWET +E +RR+F+Q+GDILEAV+I+DKNTG+SKGYGF + V II+ R + L R Sbjct: 16 SPFGDTTFTKVFVGGLAWETQSETLRRHFDQYGDILEAVVITDKNTGRSKGYGFVTFRDPEAARRACVDPTPIIDGRRANCNLASLGRSR 105
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:7262879-7264834 REVERSE LENGTH=274) HSP 1 Score: 101.293 bits (251), Expect = 1.208e-24 Identity = 49/90 (54.44%), Postives = 60/90 (66.67%), Query Frame = 0 Query: 8 SQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGFEEIK---------VAIFLIINNREVRHHTVELQHHR 88 S FGDTTFTKVFVGGLAWET +E +RR+F+Q+GDILEAV+I+DKNTG+SKGYGF + V II+ R + L R Sbjct: 16 SPFGDTTFTKVFVGGLAWETQSETLRRHFDQYGDILEAVVITDKNTGRSKGYGFVTFRDPEAARRACVDPTPIIDGRRANCNLASLGRSR 105
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:7262879-7264834 REVERSE LENGTH=274) HSP 1 Score: 101.293 bits (251), Expect = 1.208e-24 Identity = 49/90 (54.44%), Postives = 60/90 (66.67%), Query Frame = 0 Query: 8 SQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGFEEIK---------VAIFLIINNREVRHHTVELQHHR 88 S FGDTTFTKVFVGGLAWET +E +RR+F+Q+GDILEAV+I+DKNTG+SKGYGF + V II+ R + L R Sbjct: 16 SPFGDTTFTKVFVGGLAWETQSETLRRHFDQYGDILEAVVITDKNTGRSKGYGFVTFRDPEAARRACVDPTPIIDGRRANCNLASLGRSR 105
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:28686932-28688506 REVERSE LENGTH=285) HSP 1 Score: 98.9821 bits (245), Expect = 1.137e-23 Identity = 58/171 (33.92%), Postives = 87/171 (50.88%), Query Frame = 0 Query: 8 SQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF------EEIKVAIF---LIINNREVRHHTVELQHHRH----------RHHLRHHQSFI-NLLGTQHTLLIMVTTKLCITHKFNSHNTITRCTEQHQRQWAHHITMGTHCNHQGEHIL 158 S FGDTTFTKVFVGGLAWET +E +R++FEQ+G+ILEAV+I+DKNTG+SKGYGF E + A II+ R + L R LR +I N+ G + +L+ + + + + + ++ + + G + + G+ L Sbjct: 16 SPFGDTTFTKVFVGGLAWETQSETLRQHFEQYGEILEAVVIADKNTGRSKGYGFVTFRDPEAARRACADPTPIIDGRRANCNLASLGRPRPPLPYAVIPNMPGRLRPASPYIGNVQGPRGSLIGNYPYQQPLPYNYQQGVVYPYGVTAYGPEYMYSQSQGLYSPYMGQQYL 186
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:19229516-19231043 FORWARD LENGTH=336) HSP 1 Score: 91.6633 bits (226), Expect = 8.764e-21 Identity = 40/56 (71.43%), Postives = 47/56 (83.93%), Query Frame = 0 Query: 12 DTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGFEEIKVA 67 DT TK+FVGGLAWET + MRRYFEQFG+I+EAV+I+DKNTG+SKGYGF K A Sbjct: 18 DTKLTKIFVGGLAWETQRDTMRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFKEA 73
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:19229516-19231043 FORWARD LENGTH=336) HSP 1 Score: 91.6633 bits (226), Expect = 8.764e-21 Identity = 40/56 (71.43%), Postives = 47/56 (83.93%), Query Frame = 0 Query: 12 DTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGFEEIKVA 67 DT TK+FVGGLAWET + MRRYFEQFG+I+EAV+I+DKNTG+SKGYGF K A Sbjct: 18 DTKLTKIFVGGLAWETQRDTMRRYFEQFGEIVEAVVITDKNTGRSKGYGFVTFKEA 73
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:8105808-8107618 FORWARD LENGTH=242) HSP 1 Score: 89.3521 bits (220), Expect = 1.730e-20 Identity = 47/115 (40.87%), Postives = 67/115 (58.26%), Query Frame = 0 Query: 10 FGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGFEEIK---------VAIFLIINNREVRHHTVELQHHRHRHHLRHHQSFINLLGTQHTLLIMVTT 115 GDTT+TKVFVGGLAWET E M+++FEQFG+ILEAV+I+DK +G+SKGYGF + V +I+ R + L R + +H G + + +M++T Sbjct: 7 LGDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAARSACVDATPVIDGRRANCNLASLGLQRSKPSTPNHGG----GGRINNMRVMMST 117
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. ExPASy Swiss-Prot
Match: RBM38_HUMAN (RNA-binding protein 38 OS=Homo sapiens OX=9606 GN=RBM38 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 3.020e-16 Identity = 33/50 (66.00%), Postives = 41/50 (82.00%), Query Frame = 0 Query: 12 DTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF 61 DTTFTK+FVGGL + T +R+YFE FGDI EAV+I+D+ TGKS+GYGF Sbjct: 30 DTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGF 79
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. ExPASy Swiss-Prot
Match: RBM38_MOUSE (RNA-binding protein 38 OS=Mus musculus OX=10090 GN=Rbm38 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 3.970e-16 Identity = 33/50 (66.00%), Postives = 41/50 (82.00%), Query Frame = 0 Query: 12 DTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF 61 DTTFTK+FVGGL + T +R+YFE FGDI EAV+I+D+ TGKS+GYGF Sbjct: 28 DTTFTKIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGF 77
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. ExPASy Swiss-Prot
Match: RBM38_XENTR (RNA-binding protein 38 OS=Xenopus tropicalis OX=8364 GN=rbm38 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 5.687e-16 Identity = 33/50 (66.00%), Postives = 41/50 (82.00%), Query Frame = 0 Query: 12 DTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF 61 DTTFTK+FVGGL + T +R+YFE FGDI EAV+I+D+ TGKS+GYGF Sbjct: 7 DTTFTKIFVGGLPYHTTDASLRKYFEVFGDIDEAVVITDRQTGKSRGYGF 56
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. ExPASy Swiss-Prot
Match: RBM38_CHICK (RNA-binding protein 38 OS=Gallus gallus OX=9031 GN=RBM38 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 6.776e-16 Identity = 33/50 (66.00%), Postives = 41/50 (82.00%), Query Frame = 0 Query: 12 DTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF 61 DTTFTK+FVGGL + T +R+YFE FGDI EAV+I+D+ TGKS+GYGF Sbjct: 7 DTTFTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGF 56
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. ExPASy Swiss-Prot
Match: ARP1_ARATH (Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.961e-15 Identity = 44/84 (52.38%), Postives = 50/84 (59.52%), Query Frame = 0 Query: 10 FGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGFEEIKVAIFL---------IINNREVRHHTVEL 84 FGDT TKVFVGGLAW+T E M +F ++GDILEAVIISDK T +SKGYGF K A IIN R + L Sbjct: 11 FGDTKLTKVFVGGLAWDTHKEAMYDHFIKYGDILEAVIISDKLTRRSKGYGFVTFKDAKAATRACEDSTPIINGRRANCNLASL 94
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. ExPASy Swiss-Prot
Match: RB24B_XENLA (RNA-binding protein 24-B OS=Xenopus laevis OX=8355 GN=rbm24-b PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.026e-15 Identity = 32/50 (64.00%), Postives = 41/50 (82.00%), Query Frame = 0 Query: 12 DTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF 61 DTT+TK+FVGGL + T +R+YFE FGDI EAV+I+D+ TGKS+GYGF Sbjct: 7 DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGF 56
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. ExPASy Swiss-Prot
Match: RB24A_XENLA (RNA-binding protein 24-A OS=Xenopus laevis OX=8355 GN=rbm24-a PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.720e-15 Identity = 32/50 (64.00%), Postives = 41/50 (82.00%), Query Frame = 0 Query: 12 DTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF 61 DTT+TK+FVGGL + T +R+YFE FGDI EAV+I+D+ TGKS+GYGF Sbjct: 7 DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGF 56
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. ExPASy Swiss-Prot
Match: RBM24_XENTR (RNA-binding protein 24 OS=Xenopus tropicalis OX=8364 GN=rbm24 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.307e-15 Identity = 32/50 (64.00%), Postives = 41/50 (82.00%), Query Frame = 0 Query: 12 DTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF 61 DTT+TK+FVGGL + T +R+YFE FGDI EAV+I+D+ TGKS+GYGF Sbjct: 7 DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGF 56
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. ExPASy Swiss-Prot
Match: RBM38_XENLA (RNA-binding protein 38 OS=Xenopus laevis OX=8355 GN=rbm38 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 3.328e-15 Identity = 32/50 (64.00%), Postives = 40/50 (80.00%), Query Frame = 0 Query: 12 DTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF 61 DTTFTK+FVGGL + T +R+YFE FGDI EAV+I+D+ T KS+GYGF Sbjct: 7 DTTFTKIFVGGLPYHTTDASLRKYFEVFGDIDEAVVITDRQTAKSRGYGF 56
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. ExPASy Swiss-Prot
Match: RBM24_CHICK (RNA-binding protein 24 OS=Gallus gallus OX=9031 GN=RBM24 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 4.287e-15 Identity = 32/50 (64.00%), Postives = 41/50 (82.00%), Query Frame = 0 Query: 12 DTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF 61 DTT+TK+FVGGL + T +R+YFE FGDI EAV+I+D+ TGKS+GYGF Sbjct: 7 DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGF 56
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. ExPASy TrEMBL
Match: A0A2P5XHY7|A0A2P5XHY7_GOSBA (RRM domain-containing protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA17750 PE=4 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 5.177e-44 Identity = 98/216 (45.37%), Postives = 115/216 (53.24%), Query Frame = 0 Query: 1 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGFEEI------------KVAIFL-------------------IINNREVRHHTVELQHHRHRHHLRHHQS-----FINLLGTQHTLLIMVTTKLCITHKFNSHNTITRCTEQHQRQWAHHITMGTHCNHQGEHILLRKHNACHHHQQDLHIFTIPHK 180 MAYPHYRS FGDTTFTKVFVGGLAWETPTEEMRRYF+QFG+ILEAVII++KNTGKSKGYGF + ++ F+ +I R + L R +Q + G+Q T+L TKL I HK + HNTI C HQ QW HI + T C GEH L + NA D IFTI HK Sbjct: 1 MAYPHYRSPFGDTTFTKVFVGGLAWETPTEEMRRYFQQFGEILEAVIITEKNTGKSKGYGFVSVPDSARRACVDPKRMITFVKVTFRDPESARRACVDPNPVIGGRRANCNIASLGRPRPSPPRGRNQGSSPFQGVAQQGSQLTVLNTGITKLSIIHKSSRHNTIINCMVHHQLQWGLHIILATLCKLPGEHFLHPRLNA----SPDRPIFTILHK 212
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. ExPASy TrEMBL
Match: A0A067GMP3|A0A067GMP3_CITSI (RRM domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g039503mg PE=4 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.359e-36 Identity = 90/233 (38.63%), Postives = 110/233 (47.21%), Query Frame = 0 Query: 1 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF------EEIKVAIF---LIINNREVRHHTVELQHHR--------HRHHLRHHQ---SFINLLGTQHTLLIMVTTKLCITHKFNSHNTITRCTEQHQRQWAHHITMGTHCNHQGEHIL----LRKHNACHHHQQDLHIFTIPH---------KRKESFPLPQLFNFQGNPFPF 200 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF E + A +I+ R + L R ++ +HQ + G +L + ++ + T T HQ Q+ H + GT G L+ + Q + P + + FP P PFPF Sbjct: 1 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGFVTFRDPESARRACDNPNPVIDGRRANCNIASLGRPRPSPPRGRNQGGNIPYHQQQGGAPSYGGVAASLPPPPPPPPSVIYQPFGYPTYTPDYGYHQPQYYHQM-YGTTSTPMGSPYYYGYSLQSPRGAYSAPQAQRMPPSPAGPSYLYYPTQAEGIFPPPPTLQLPRQPFPF 232
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. ExPASy TrEMBL
Match: A0A8B8JPG7|A0A8B8JPG7_ABRPR (RNA-binding protein 38-like OS=Abrus precatorius OX=3816 GN=LOC113848197 PE=4 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.594e-35 Identity = 69/114 (60.53%), Postives = 78/114 (68.42%), Query Frame = 0 Query: 1 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF------EEIKVAIF---LIINNREVRHHTVELQHHRHRHHLRHHQSFINLLGT 105 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMR+YFEQFGDILEAVII+DKNTGKSKGYGF E + A +I+ R + L R R +F + +GT Sbjct: 1 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRKYFEQFGDILEAVIITDKNTGKSKGYGFVTFRDPESARRACADPNPVIDGRRANCNIASLGRPRP-SPPRGRGTFQSGVGT 113
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. ExPASy TrEMBL
Match: V4TC42|V4TC42_CITCL (RRM domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10002164mg PE=4 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.798e-35 Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 Query: 1 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF 61 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF Sbjct: 1 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF 61
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. ExPASy TrEMBL
Match: A0A4V3WJR9|A0A4V3WJR9_CAMSI (RRM domain-containing protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_008891 PE=4 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.044e-34 Identity = 94/228 (41.23%), Postives = 112/228 (49.12%), Query Frame = 0 Query: 1 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQF-GDILEAVIISDKNTGKSKGYGF------EEIKVAIF---LIINNREVRHHTVELQHHRHRHHLRHHQSFINLL-------GTQHTLLIMVTT-----------------KLCITHKFNSHNTITRCTEQHQRQWAHHITMGTHCNHQGEHILLRKHNACHHHQQDLHIFTIPHK-RKESFPL--PQLF 191 MAY HYRS FGDTTFTKVFVGGLAWETPT+ MR YFEQF G+ILEAVII+DKNTGKSKGYGF E + A +I+ R + L R +Q N GT + +CITH F+ HN E H + WA H +M C QG+H L +HN +D FTI + R S P+ P LF Sbjct: 1 MAYQHYRSPFGDTTFTKVFVGGLAWETPTDVMRSYFEQFGGEILEAVIIADKNTGKSKGYGFVTFGDAESARRACADPNPVIDGRRANCNIASLGRPRPSTPRGRNQGGSNPYHGGAVAQGTSPSSSYRAPPPAPLPPPPPPPVMYPPYGVCITHNFSKHNITINFMEGHHQLWALHTSMDIPCKLQGDHFLRPRHNV----SKDHLTFTILRRWRGPSLPIHPPLLF 224
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. ExPASy TrEMBL
Match: A0A151TZR8|A0A151TZR8_CAJCA (RNA-binding protein 24-B OS=Cajanus cajan OX=3821 GN=KK1_005167 PE=4 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.829e-34 Identity = 69/114 (60.53%), Postives = 76/114 (66.67%), Query Frame = 0 Query: 1 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF------EEIKVAIF---LIINNREVRHHTVELQHHRHRHHLRHHQSFINLLGT 105 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMR+YFEQFGDILEAVII+DKNTGKSKGYGF E + A +I+ R + L R R +F GT Sbjct: 7 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRKYFEQFGDILEAVIITDKNTGKSKGYGFVTFRDPESARRACADPNPMIDGRRANCNIASLGRPRP-SPPRGRGTFQGGAGT 119
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. ExPASy TrEMBL
Match: A0A0R0GKE7|A0A0R0GKE7_SOYBN (RRM domain-containing protein OS=Glycine max OX=3847 GN=100787086 PE=4 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.168e-34 Identity = 65/97 (67.01%), Postives = 71/97 (73.20%), Query Frame = 0 Query: 1 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF------EEIKVAIF---LIINNREVRHHTVELQHHR 88 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMR+YFEQFGDILEAVII+DKNTGKSKGYGF E + A +I+ R + L R Sbjct: 1 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRKYFEQFGDILEAVIITDKNTGKSKGYGFVTFRDPESARRACTDPNPVIDGRRANCNIASLGRPR 97
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. ExPASy TrEMBL
Match: A0A2C9WE29|A0A2C9WE29_MANES (RRM domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_02G151600 PE=4 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 2.407e-34 Identity = 67/114 (58.77%), Postives = 74/114 (64.91%), Query Frame = 0 Query: 1 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF------EEIKVAIF---LIINNREVRHHTVELQHHRHRHHLRHHQSFINLLGT 105 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFG+ILEAVII+DKNTGKSKGYGF E + A +I+ R + L R Q G+ Sbjct: 1 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGEILEAVIITDKNTGKSKGYGFVTFRDPESARRACTDPNPVIDGRRANCNIASLGRPRPSPPRGRPQGGTPYQGS 114
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. ExPASy TrEMBL
Match: A0A2C9WFL1|A0A2C9WFL1_MANES (RRM domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_02G151600 PE=4 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 2.573e-34 Identity = 67/114 (58.77%), Postives = 74/114 (64.91%), Query Frame = 0 Query: 1 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF------EEIKVAIF---LIINNREVRHHTVELQHHRHRHHLRHHQSFINLLGT 105 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFG+ILEAVII+DKNTGKSKGYGF E + A +I+ R + L R Q G+ Sbjct: 1 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGEILEAVIITDKNTGKSKGYGFVTFRDPESARRACTDPNPVIDGRRANCNIASLGRPRPSPPRGRPQGGTPYQGS 114
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. ExPASy TrEMBL
Match: A0A445HDF6|A0A445HDF6_GLYSO (Putative RNA-binding protein ARP1 OS=Glycine soja OX=3848 GN=D0Y65_036153 PE=4 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 3.002e-34 Identity = 65/97 (67.01%), Postives = 71/97 (73.20%), Query Frame = 0 Query: 1 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRRYFEQFGDILEAVIISDKNTGKSKGYGF------EEIKVAIF---LIINNREVRHHTVELQHHR 88 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMR+YFEQFGDILEAVII+DKNTGKSKGYGF E + A +I+ R + L R Sbjct: 1 MAYPHYRSQFGDTTFTKVFVGGLAWETPTEEMRKYFEQFGDILEAVIITDKNTGKSKGYGFVTFRDPESARRACTDPNPVIDGRRANCNIASLGRPR 97 The following BLAST results are available for this feature:
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. Araport11
Analysis Date: 2023-08-23 (Blastp of Citrus sinensis cv. Newhall v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. ExPASy Swiss-Prot
Analysis Date: 2023-08-23 (Blastp of Citrus sinensis cv. Newhall v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of EVM_prediction_chr2.1_tiancheng.1714 vs. ExPASy TrEMBL
Analysis Date: 2023-08-23 (Blastp of Citrus sinensis cv. Newhall v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus sinensis cv. Newhall v1.0 proteins
Date Performed: 2023-08-08 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >evm.model.chr2.1_tiancheng.1714_cs-GNU_v1 ID=evm.model.chr2.1_tiancheng.1714_cs-GNU_v1; Name=EVM_prediction_chr2.1_tiancheng.1714; organism=Citrus sinensis; type=mRNA; length=981bpback to top protein sequence of evm.model.chr2.1_tiancheng.1714_cs-GNU_v1 >evm.model.chr2.1_tiancheng.1714_cs-GNU_v1 ID=evm.model.chr2.1_tiancheng.1714_cs-GNU_v1; Name=evm.model.chr2.1_tiancheng.1714_cs-GNU_v1; organism=Citrus sinensis; type=polypeptide; length=327bpback to top mRNA from alignment at chr2.1_tiancheng:30712434..30715649- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=3216bp; location=Sequence derived from: chr2.1_tiancheng:30712434..30715649- (Citrus sinensisback to top Coding sequence (CDS) from alignment at chr2.1_tiancheng:30712434..30715649- >evm.model.chr2.1_tiancheng.1714_cs-GNU_v1 ID=evm.model.chr2.1_tiancheng.1714_cs-GNU_v1; Name=EVM_prediction_chr2.1_tiancheng.1714; organism=Citrus sinensis; type=CDS; length=981bp; location=Sequence derived from: chr2.1_tiancheng:30712434..30715649- (Citrus sinensisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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