EVM_prediction_chr2.1_tiancheng.1012 | Citrus Genome Database

Transcript Overview


Name	EVM_prediction_chr2.1_tiancheng.1012
Unique Name	evm.model.chr2.1_tiancheng.1012_cs-GNU_v1
Type	mRNA
Organism	Citrus sinensis (Sweet orange)
Sequence length	1236

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Citrus sinensis cv. Newhall v1.0 genome	2023-08-01
InterProScan Analysis for Citrus sinensis cv. Newhall v1.0 proteins	2023-08-08
Blastp of Citrus sinensis cv. Newhall v1.0 proteins vs Araport11	2023-08-23
Blastp of Citrus sinensis cv. Newhall v1.0 proteins vs UniProt Swissprot	2023-08-23
Blastp of Citrus sinensis cv. Newhall v1.0 proteins vs UniProt TrEMBL	2023-08-23

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
caucsnL156	Citrus australis genome v1.0 (UQ)	Citrus australis
cccsnL163	Citrus clementina genome v1.0 (JGI)	Citrus clementina
cmjcsnL264	Citrus maxima Cupi Majiayou v1.0 genome	Citrus maxima
clecsnL0928	Citrus limon cv. Eureka genome v1.0	Citrus limon
clecsnL0977	Citrus limon cv. Eureka genome v1.0	Citrus limon
cscsnL0503	Citrus sinensis genome v1.1 (JGI)	Citrus sinensis
csncsnR513	Citrus sinensis cv. Newhall v1.0 genome	Citrus sinensis
csndvbR268	Citrus sinensis cv. Valencia DVS_B genome v1.0	Citrus sinensis
csndvaR266	Citrus sinensis cv. Valencia DVS_A genome v1.0	Citrus sinensis
csnfhsR475	Fortunella hindsii S3y-45 genome v2.0	Fortunella hindsii
csnzkR601	Poncirus trifoliata acc. ZK8 v1.0 (HZAU)	Poncirus trifoliata

Orthologs


Gene/Transcript	Assembly	Species
Fh3g18600.1	Fortunella hindsii S3y-45 genome v2.0	Fortunella hindsii
Pt5g016570.1	Poncirus trifoliata acc. ZK8 v1.0 (HZAU)	Poncirus trifoliata
g5008.t1	Citrus australis genome v1.0 (UQ)	Citrus australis
NM_gene15820.t1	Citrus limon cv. Eureka genome v1.0	Citrus limon
NM_gene19546.t1	Citrus limon cv. Eureka genome v1.0	Citrus limon
CMJ_chr3_011160.1	Citrus maxima Cupi Majiayou v1.0 genome	Citrus maxima
Ciclev10003730m	Citrus clementina genome v1.0 (JGI)	Citrus clementina

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
gene-KPL71_015262-mRNA1	Citrus sinensis cv. Valencia DVS_B genome v1.0	Citrus sinensis
orange1.1g040064m.v1.1	Citrus sinensis genome v1.1 (JGI)	Citrus sinensis
gene-KPL70_014919-mRNA1	Citrus sinensis cv. Valencia DVS_A genome v1.0	Citrus sinensis
EVM_prediction_chr2.2_youzi.1092	Citrus sinensis cv. Newhall v1.0 genome	Citrus sinensis

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EVM_prediction_chr2.1_tiancheng.1012	evm.TU.chr2.1_tiancheng.1012_cs-GNU_v1	Citrus sinensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
evm.model.chr2.1_tiancheng.1012.exon2_cs-GNU_v1	evm.model.chr2.1_tiancheng.1012.exon2_cs-GNU_v1	Citrus sinensis	exon
evm.model.chr2.1_tiancheng.1012.exon1_cs-GNU_v1	evm.model.chr2.1_tiancheng.1012.exon1_cs-GNU_v1	Citrus sinensis	exon

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
evm.model.chr2.1_tiancheng.1012.utr3p1_cs-GNU_v1	evm.model.chr2.1_tiancheng.1012.utr3p1_cs-GNU_v1	Citrus sinensis	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
cds.evm.model.chr2.1_tiancheng.1012_cs-GNU_v1	cds.evm.model.chr2.1_tiancheng.1012_cs-GNU_v1_2	Citrus sinensis	CDS
cds.evm.model.chr2.1_tiancheng.1012_cs-GNU_v1	cds.evm.model.chr2.1_tiancheng.1012_cs-GNU_v1	Citrus sinensis	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
evm.model.chr2.1_tiancheng.1012.utr5p1_cs-GNU_v1	evm.model.chr2.1_tiancheng.1012.utr5p1_cs-GNU_v1	Citrus sinensis	five_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
evm.model.chr2.1_tiancheng.1012_cs-GNU_v1	evm.model.chr2.1_tiancheng.1012_cs-GNU_v1	Citrus sinensis	polypeptide
evm.model.chr2.1_tiancheng.1012_cs-GNU_v1	evm.model.chr2.1_tiancheng.1012_cs-GNU_v1-protein	Citrus sinensis	polypeptide

Homology

[Close]

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. Araport11
Match: | (Symbols: mTERF7 | | chr5:2520188-2521405 FORWARD LENGTH=405)

HSP 1 Score: 285.419 bits (729), Expect = 1.100e-92
Identity = 147/346 (42.49%), Postives = 216/346 (62.43%), Query Frame = 0

Query:   39 LENRSVETKENGQKRSSMVSYFMNSCGLSAKSALAASKKVSVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPSKFCEIVNKVKAMGFNPLRGMFLKAIEVI-GQMTTLNWESKIEVYRRWGWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKKDLCPCSLLVLGETKFKGSYVTKFQVKVPQLLNLY 383
            L +++ +  E  QK S  ++Y ++SCGLS  SA  AS+K+ + + E  ++VL LL +HGFT  QIS +V   P ++  N E  LLPK+ FF SIGV    L + ++S P +L  SL N+L P+YNFLK+++  DE +V  ++R  W FL D   NL PNI ++ E GVP   I   +   P        +F  I  + + MGFNP +  F+ AI  + G+     W+   EVY+RWGWS+D+ + AF++HP+CM +SE KI +TM++FVN+M    + IA+ P +L +SLEKRI+PRCSV +VL+S GL+K+D    SLLV  E  F    V K++ ++P+L+NLY
Sbjct:   54 LTSKNPKDDEQQQKLSFTLNYLIDSCGLSPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDEKIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELPELMNLY 399

[Close]

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. Araport11
Match: | (Symbols: mTERF27 | | chr1:7406406-7407578 REVERSE LENGTH=390)

HSP 1 Score: 228.024 bits (580), Expect = 1.242e-70
Identity = 134/366 (36.61%), Postives = 224/366 (61.20%), Query Frame = 0

Query:   19 HLGFVQNLVFIVRLISSSLPLENRSVETKENGQKRSSMVSYFMNSCGLSAKSALAASKKVSVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPSKFCEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVYRRWGWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKK-DLCPCSLLVLGETKFKGSYVTKFQVKVPQLLNLY 383
            +LGF   LV  +R + S   +++ ++E K+     S  VSY ++SCGLS +SA + S+ V + +++  DSVL L  +HGFTN QI+ V+   P++++L+ E  + PK+ FF SIG  + D  K+ISS+P +L+ SL  RL P Y+ LK+I+V +E VV+ +KR    F       ++  ++  RE+GVP  +I   V ++P        +F E++N+V + GF+P +  F+ A+      +    E K ++++ +GWSK++ + A  R P C+ +S+EKI  T+++ VN +G  ++DI  RP +L  S+EKRI PR  V+ +LLSKGL+KK D+   ++L L  ++F   +V K+Q ++PQL+  +
Sbjct:   25 NLGF---LVGRIRTLCSVSQVKSENLE-KQKPCLESFTVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPF 386

[Close]

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. Araport11
Match: | (Symbols: mTERF27 | | chr1:7406406-7407770 REVERSE LENGTH=354)

HSP 1 Score: 226.868 bits (577), Expect = 1.449e-70
Identity = 124/328 (37.80%), Postives = 205/328 (62.50%), Query Frame = 0

Query:   57 VSYFMNSCGLSAKSALAASKKVSVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPSKFCEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVYRRWGWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKK-DLCPCSLLVLGETKFKGSYVTKFQVKVPQLLNLY 383
            VSY ++SCGLS +SA + S+ V + +++  DSVL L  +HGFTN QI+ V+   P++++L+ E  + PK+ FF SIG  + D  K+ISS+P +L+ SL  RL P Y+ LK+I+V +E VV+ +KR    F       ++  ++  RE+GVP  +I   V ++P        +F E++N+V + GF+P +  F+ A+      +    E K ++++ +GWSK++ + A  R P C+ +S+EKI  T+++ VN +G  ++DI  RP +L  S+EKRI PR  V+ +LLSKGL+KK D+   ++L L  ++F   +V K+Q ++PQL+  +
Sbjct:   23 VSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQPF 350

[Close]

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. Araport11
Match: | (Symbols: mTERF27 | | chr1:7406406-7407770 REVERSE LENGTH=454)

HSP 1 Score: 227.254 bits (578), Expect = 1.241e-69
Identity = 134/364 (36.81%), Postives = 223/364 (61.26%), Query Frame = 0

Query:   19 HLGFVQNLVFIVRLISSSLPLENRSVETKENGQKRSSMVSYFMNSCGLSAKSALAASKKVSVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPSKFCEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVYRRWGWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKK-DLCPCSLLVLGETKFKGSYVTKFQVKVPQLLN 381
            +LGF   LV  +R + S   +++ ++E K+     S  VSY ++SCGLS +SA + S+ V + +++  DSVL L  +HGFTN QI+ V+   P++++L+ E  + PK+ FF SIG  + D  K+ISS+P +L+ SL  RL P Y+ LK+I+V +E VV+ +KR    F       ++  ++  RE+GVP  +I   V ++P        +F E++N+V + GF+P +  F+ A+      +    E K ++++ +GWSK++ + A  R P C+ +S+EKI  T+++ VN +G  ++DI  RP +L  S+EKRI PR  V+ +LLSKGL+KK D+   ++L L  ++F   +V K+Q ++PQL+ 
Sbjct:   89 NLGF---LVGRIRTLCSVSQVKSENLE-KQKPCLESFTVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDEMPQLVQ 448

[Close]

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. Araport11
Match: | (Symbols: mTERF32 | | chr1:22960326-22961639 REVERSE LENGTH=437)

HSP 1 Score: 176.407 bits (446), Expect = 1.803e-50
Identity = 123/397 (30.98%), Postives = 205/397 (51.64%), Query Frame = 0

Query:   44 VETKENGQKRSSMVSYFMNSCGLSAKSALAASKKVSVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNP---CGASIIPSKFCEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKI--------------EVYRRW---------------------GWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKKDLCPCSLLVLGETK-FKGSYVTKFQVK--VPQLLNLYE-EEMNLPDLRPGFER 398
            V +++  +  +  VSY ++S GL+ K A + S KVS  N    DSVL LL +HGFT+ QIS ++   P+++ L+ E++L PK++F  SIG  S +L + +S+ P +L       LS  Y+F+K I+  D+   ++ K            N   N+  LRE+GVP   + + +IS+    CG      KF E + K   +GF+P    F+KA+ V+  ++    E+K                ++++W                     G+S+DE L   +R P C+  S E +    +F V +M W  + +A  P++L YSLEKR VPRC+V++VL+SKGL++ +L P S ++   ++ F   YV K   K  V +L+ ++  + ++L D +   E+
Sbjct:   46 VSSRDGRKGHNFTVSYLVDSLGLATKVAESISMKVSFDNKGNPDSVLSLLRSHGFTDSQISNIIRTFPRLLILDAEKSLAPKLQFLQSIGASSSELTETVSAVPKILGKRKGKSLSRYYDFVKVIIEADK-SSKLEKLCHSLPEGSKQENKIRNLLVLREMGVPQRLLFSLLISDAGDVCGK----EKFKESLKKAVEIGFDPTTATFVKALNVLYGLSDKGIENKFNACKRLGLAVDDVWAMFKKWPNILTKSEKKIENSVETFLGLGFSRDEFLMMVKRFPQCIGYSTELMKTKTEFLVTEMNWPLKAVASIPQVLGYSLEKRTVPRCNVIKVLISKGLLESELPPISSVLTSTSEVFLYMYVRKHDDKQLVAELMAIFTGDRVSLTDQKTRLEQ 437

[Close]

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. Araport11
Match: | (Symbols: mTERF29 | | chr1:22904713-22905969 FORWARD LENGTH=418)

HSP 1 Score: 169.474 bits (428), Expect = 4.684e-48
Identity = 118/370 (31.89%), Postives = 189/370 (51.08%), Query Frame = 0

Query:   57 VSYFMNSCGLSAKSALAASKKVSVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAF-LRDFN-SNLAPNIAFLREIGVPASNISNFVISNP---CGASIIPSKFCEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVY--------------RRW---------------------GWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKKDLCPCS-LLVLGETKFKGSYVTKFQVK--VPQLLNLY 383
            VSY ++S GL+ K A + S+KVS ++    DSVL LL +HGFT  QIS ++   PQ++  + E++L PK++F  S G  S ++ +++SS P +L       +S  Y+F+K     D ++ +  K  K    L   N  N   N++ LRE+G+P   + + +IS+    CG      KF E + KV  MGF+P    F++A++VI +M     E K+ +Y              ++W                     G+S+DE     +  P C+ +S E + K  +F V KM W  + +   P +  YSLEKRIVPR +V++ L+SKGL++ +L   S +L+  +  F   YV     K  V +L+ +Y
Sbjct:   55 VSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIK-----DTLLEKSSKNEKLCHSLPQGNLENKIRNVSVLRELGMPHKLLFSLLISDSQPVCGK----EKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIY 415

[Close]

Query:   57 VSYFMNSCGLSAKSALAASKKVSVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAF-LRDFN-SNLAPNIAFLREIGVPASNISNFVISNP---CGASIIPSKFCEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVY--------------RRW---------------------GWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKKDLCPCS-LLVLGETKFKGSYVTKFQVK--VPQLLNLY 383
            VSY ++S GL+ K A + S+KVS ++    DSVL LL +HGFT  QIS ++   PQ++  + E++L PK++F  S G  S ++ +++SS P +L       +S  Y+F+K     D ++ +  K  K    L   N  N   N++ LRE+G+P   + + +IS+    CG      KF E + KV  MGF+P    F++A++VI +M     E K+ +Y              ++W                     G+S+DE     +  P C+ +S E + K  +F V KM W  + +   P +  YSLEKRIVPR +V++ L+SKGL++ +L   S +L+  +  F   YV     K  V +L+ +Y
Sbjct:   55 VSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIK-----DTLLEKSSKNEKLCHSLPQGNLENKIRNVSVLRELGMPHKLLFSLLISDSQPVCGK----EKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIY 415

[Close]

Query:   57 VSYFMNSCGLSAKSALAASKKVSVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAF-LRDFN-SNLAPNIAFLREIGVPASNISNFVISNP---CGASIIPSKFCEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVY--------------RRW---------------------GWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKKDLCPCS-LLVLGETKFKGSYVTKFQVK--VPQLLNLY 383
            VSY ++S GL+ K A + S+KVS ++    DSVL LL +HGFT  QIS ++   PQ++  + E++L PK++F  S G  S ++ +++SS P +L       +S  Y+F+K     D ++ +  K  K    L   N  N   N++ LRE+G+P   + + +IS+    CG      KF E + KV  MGF+P    F++A++VI +M     E K+ +Y              ++W                     G+S+DE     +  P C+ +S E + K  +F V KM W  + +   P +  YSLEKRIVPR +V++ L+SKGL++ +L   S +L+  +  F   YV     K  V +L+ +Y
Sbjct:   55 VSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIK-----DTLLEKSSKNEKLCHSLPQGNLENKIRNVSVLRELGMPHKLLFSLLISDSQPVCGK----EKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIY 415

[Close]

Query:   57 VSYFMNSCGLSAKSALAASKKVSVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAF-LRDFN-SNLAPNIAFLREIGVPASNISNFVISNP---CGASIIPSKFCEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVY--------------RRW---------------------GWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKKDLCPCS-LLVLGETKFKGSYVTKFQVK--VPQLLNLY 383
            VSY ++S GL+ K A + S+KVS ++    DSVL LL +HGFT  QIS ++   PQ++  + E++L PK++F  S G  S ++ +++SS P +L       +S  Y+F+K     D ++ +  K  K    L   N  N   N++ LRE+G+P   + + +IS+    CG      KF E + KV  MGF+P    F++A++VI +M     E K+ +Y              ++W                     G+S+DE     +  P C+ +S E + K  +F V KM W  + +   P +  YSLEKRIVPR +V++ L+SKGL++ +L   S +L+  +  F   YV     K  V +L+ +Y
Sbjct:   55 VSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIK-----DTLLEKSSKNEKLCHSLPQGNLENKIRNVSVLRELGMPHKLLFSLLISDSQPVCGK----EKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIY 415

[Close]

Query:   57 VSYFMNSCGLSAKSALAASKKVSVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAF-LRDFN-SNLAPNIAFLREIGVPASNISNFVISNP---CGASIIPSKFCEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVY--------------RRW---------------------GWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKKDLCPCS-LLVLGETKFKGSYVTKFQVK--VPQLLNLY 383
            VSY ++S GL+ K A + S+KVS ++    DSVL LL +HGFT  QIS ++   PQ++  + E++L PK++F  S G  S ++ +++SS P +L       +S  Y+F+K     D ++ +  K  K    L   N  N   N++ LRE+G+P   + + +IS+    CG      KF E + KV  MGF+P    F++A++VI +M     E K+ +Y              ++W                     G+S+DE     +  P C+ +S E + K  +F V KM W  + +   P +  YSLEKRIVPR +V++ L+SKGL++ +L   S +L+  +  F   YV     K  V +L+ +Y
Sbjct:   55 VSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIK-----DTLLEKSSKNEKLCHSLPQGNLENKIRNVSVLRELGMPHKLLFSLLISDSQPVCGK----EKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQLVTELMAIY 415

[Close]

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. ExPASy Swiss-Prot
Match: MTEFE_ARATH (Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF15 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.804e-12
Identity = 73/306 (23.86%), Postives = 132/306 (43.14%), Query Frame = 0

Query:   67 SAKSALAASKKVSVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPSKFCEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVYRRWGWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKKDLCPCSLLVLGETKFKGSYVTKF 372
            + KS L  S ++ +   +  +  +R+L + GF +  +S+++   P ++ +N E  +  KIEF   IG+  D++ +     P +L +  + RL P         +LDE        MK  F +D   ++   IA  RE  V    +       P    +I +  C  V +V  +      G F    EV         + +++   ++G  + +      + P  +    E I K ++F  N+MG+    +A  PE L  +L+K+IVPR +V+  L  KG +  D+    L+     +F   YV  +
Sbjct:  129 AIKSVLEHSSRIGI-GPDKFNECVRVLKSLGFCDSTVSRILSSFPGVLLVN-EIEIRRKIEFLVGIGIARDNIERFFHVFPEVLGIGTETRLKP---------LLDEF-------MKMGFSKD---DVKKEIA--REPRVLGLELGEL----PRCLELINTLKCREVIRVSIIS----EGAFRAGFEV---------KLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHINCLADVPEYLGVNLQKQIVPRYNVIDYLKLKGGLGCDIGLKGLIKPSMKRFYNLYVMPY 394

[Close]

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. ExPASy Swiss-Prot
Match: MTEF2_ARATH (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 2.863e-8
Identity = 52/261 (19.92%), Postives = 106/261 (40.61%), Query Frame = 0

Query:   97 GFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPSKFCEIVNKV----------------KAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVYRRWG---WSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVV 338
            G        +V   P+II     + +  KI +    G+ ++++ +L++  PHL+  S++ R  P   +   + +  E + R++      +  D    +AP + FL+E+G+P   I N ++  P   S++ +   + +  V                K +  +P          ++G       E  +  Y   G   +   E +  F   P  +R + + +     +    M    QD+ + P    YSLE+RI+PR +++
Sbjct:  327 GMNQNDFGTMVYDYPKIIGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFP---SLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIAMDP---------ALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADF---PMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIM 572

[Close]

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. ExPASy Swiss-Prot
Match: MTEF5_ARATH (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 2.482e-7
Identity = 47/218 (21.56%), Postives = 90/218 (41.28%), Query Frame = 0

Query:  124 PKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASI-IPSKFCEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVYRRWGWSKDETLNAFRRHPYCMRIS-EEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQ 339
            P +EF   +G+   D+P ++   P +  +SL + L P   FL+ + +      +++ R   A L      L   + FL + G+    I   +   P   S  +  K    +   +++  + +  +  +  +  G     N +   E +   G+  DE      R+      S +E +    D+F   M +   ++ K P+   YSL++RI PR  +VQ
Sbjct:  234 PVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFP-AILTYSRQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVD-VAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYF-QTMDYPKSELVKFPQFFGYSLQERIKPRYELVQ 448

[Close]

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. ExPASy Swiss-Prot
Match: MTEF8_ARATH (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 8.985e-7
Identity = 51/259 (19.69%), Postives = 112/259 (43.24%), Query Frame = 0

Query:   79 SVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPK--LISSTPHLLAVSLKNRLSPNYNFLKNIVVL-DEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPSKFCEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVYRRWGWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPR 334
            SV++ E   S L   G  G        ++   P I+  + +  L+P+++F  ++    DD     ++   P +L+ S+++ ++    FLK+   L  E V +++              L P I FL+E G  +  +  F+   P   ++  +     +  +  +G+         A+  + + ++ N +  I +Y  +G S ++ L    +HP  ++ +   + + +++ +  MG   +++   P  L Y L+ RI  R
Sbjct:  215 SVEDIERLISFLEPFGGIG--------IIARRPVILNSDLDSQLIPRVDFIRNLSG-EDDFATGTVLRRLPAILSYSVEH-MNGQVEFLKSFAGLTSEQVFKIVHVFPNVISTSKERKLRPRIEFLKECGFDSPGMFKFLSKAPLILALSENNLSHKLGFLVKIGYKHRTKELAFAMGAVTRTSSDNMQRVIGLYLSYGLSFEDILAMSTKHPQVLQYNYTSLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRIKHR 463

[Close]

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. ExPASy TrEMBL
Match: V4SZA8|V4SZA8_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10001326mg PE=3 SV=1)

HSP 1 Score: 840.491 bits (2170), Expect = 0.000e+0
Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 0

Query:    1 MQRTIVSHKDFGLTNSKTHLGFVQNLVFIVRLISSSLPLENRSVETKENGQKRSSMVSYFMNSCGLSAKSALAASKKVSVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPSKFCEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVYRRWGWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKKDLCPCSLLVLGETKFKGSYVTKFQVKVPQLLNLYEEEMNLPDLRPGFERRIGCEVNGVAEDC 411
            MQRTIVSHKDFGLTNSKTHLGFVQNLVFIVRLISSSLPLENRSVETKENGQKRSSMVSYFMNSCGLSAKSALAASKKVSVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPSKFCEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVYRRWGWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKKDLCPCSLLVLGETKFKGSYVTKFQVKVPQLLNLYEEEMNLPDLRPGFERRIGCEVNGVAEDC
Sbjct:    1 MQRTIVSHKDFGLTNSKTHLGFVQNLVFIVRLISSSLPLENRSVETKENGQKRSSMVSYFMNSCGLSAKSALAASKKVSVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPSKFCEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVYRRWGWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKKDLCPCSLLVLGETKFKGSYVTKFQVKVPQLLNLYEEEMNLPDLRPGFERRIGCEVNGVAEDC 411

[Close]

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. ExPASy TrEMBL
Match: V4V2V5|V4V2V5_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10003730mg PE=3 SV=1)

HSP 1 Score: 791.571 bits (2043), Expect = 0.000e+0
Identity = 391/400 (97.75%), Postives = 394/400 (98.50%), Query Frame = 0

Query:    1 MQRTIVSHKDFGLTNSKTHLGFVQNLVFIVRLISSSLPLENRSVETKENGQKRSSMVSYFMNSCGLSAKSALAASKKVSVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPSKFCEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVYRRWGWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKKDLCPCSLLVLGETKFKGSYVTKFQVKVPQLLNLYEEEMNLPDLRPGFERRI 400
            MQRTIVSHKDFGLTNSKTHLGFVQNLVFIVRLISSSLPLENRSV TKENGQK SSMVSYFMNSCGLSAKSALAASKKVS+KNTEGADSVLRLL NHGFTNLQISKVV VCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPSKF EIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVYRRWGWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKKDLCPCSLLVLGET+FKGSYVTKFQVKVPQLLNLYEEEMNLPDLRPGFER +
Sbjct:    1 MQRTIVSHKDFGLTNSKTHLGFVQNLVFIVRLISSSLPLENRSV-TKENGQKLSSMVSYFMNSCGLSAKSALAASKKVSIKNTEGADSVLRLLRNHGFTNLQISKVVRVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPSKFYEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVYRRWGWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKKDLCPCSLLVLGETQFKGSYVTKFQVKVPQLLNLYEEEMNLPDLRPGFERYV 399

[Close]

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. ExPASy TrEMBL
Match: A0A2H5NWU2|A0A2H5NWU2_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_083190 PE=3 SV=1)

HSP 1 Score: 779.245 bits (2011), Expect = 0.000e+0
Identity = 382/400 (95.50%), Postives = 388/400 (97.00%), Query Frame = 0

Query:    1 MQRTIVSHKDFGLTNSKTHLGFVQNLVFIVRLISSSLPLENRSVETKENGQKRSSMVSYFMNSCGLSAKSALAASKKVSVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPSKFCEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVYRRWGWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKKDLCPCSLLVLGETKFKGSYVTKFQVKVPQLLNLYEEEMNLPDLRPGFERRI 400
            MQRTIVSHKDFGLTNSKTHLGFVQNLVFIVRLISSSLP ENRSVETKENGQK SSMVSYFMNSCGLSAKSALAASKKVS+KNTEGADSVLRLLGNHGFTNLQISKVV VCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIV LDEVVVRVMKRMKWAFLRD +SNLAPNIAFLREIGVPASNISNFVISNPCGASIIPSKFCEIVNKVK MGFNPLR MFLKAIEVI QMT LNWESKIEVY RWGWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLS+GLIKKDLCPCSLLVLGET+FK SYVTKFQVKVPQLLNLYEEEMNL D+RPGFERR+
Sbjct:    1 MQRTIVSHKDFGLTNSKTHLGFVQNLVFIVRLISSSLPSENRSVETKENGQKLSSMVSYFMNSCGLSAKSALAASKKVSIKNTEGADSVLRLLGNHGFTNLQISKVVRVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVFLDEVVVRVMKRMKWAFLRDLSSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPSKFCEIVNKVKTMGFNPLRRMFLKAIEVISQMTKLNWESKIEVYWRWGWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSRGLIKKDLCPCSLLVLGETQFKKSYVTKFQVKVPQLLNLYEEEMNLLDVRPGFERRV 400

[Close]

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. ExPASy TrEMBL
Match: A0A2N9EC15|A0A2N9EC15_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS157 PE=3 SV=1)

HSP 1 Score: 383.645 bits (984), Expect = 1.132e-127
Identity = 191/393 (48.60%), Postives = 269/393 (68.45%), Query Frame = 0

Query:    3 RTIVSHKDFGLTNSKTHLGFVQNLVFIVRLISSSLPLENRSVETKENGQKRSSMVSYFMNSCGLSAKSALAASKKVSVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPSKFCEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVYRRWGWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKKDLCPCSLLVLGETKFKGSYVTKFQVKVPQLLNLYEEEMNLPDLRPG 395
            + +VS++   + +S +HLGF QN +F+V   SSS      S    ++ +K +  VSY +NSCGL  + A  AS ++  + +E  D VL LL NHGFTN QISKVV   P+++  + E+ + PK+EF GSIG+   +  K+IS+ P LL+ SLKN + P Y+FLK++++++E VV+  K  +W   +D   NLAPN+  LREIGVP S+IS F+   P  A I  +KF E+V +VK +GF+P++ +F+ AI V+     +NWE KIEVY+RWGWSKDETL AF++HP CM I+EE ITKTMDF VN+MGW S+ +++ P +LL+SLEKRI+PRCSV Q+LLSK LIKKDL  C++L   +  F  +YVTKFQ  +PQLL +Y+ + +L DL  G
Sbjct:   10 QILVSNRSIAVPSSISHLGFPQNPLFVVNYFSSS------SFVGPQDAKKHNFTVSYLVNSCGLPLERAKHASHRLHFETSERPDLVLNLLKNHGFTNAQISKVVNADPELLLSDPEKTIFPKLEFLGSIGLSHSECAKIISNCPSLLSRSLKNHIMPLYDFLKSVLLMNEKVVKTFKIARWGLSQDVQKNLAPNLTLLREIGVPQSSISLFLSYYPSTAFIKHTKFDELVEEVKNLGFDPIKSVFVHAIHVLASHRKVNWEHKIEVYQRWGWSKDETLFAFKKHPGCMTIAEENITKTMDFLVNRMGWPSEYVSRNPIVLLFSLEKRIIPRCSVFQILLSKALIKKDLALCTILQPKDKYFLENYVTKFQQNIPQLLEVYQGKSDLSDLGIG 396

[Close]

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. ExPASy TrEMBL
Match: A0A2N9ECB7|A0A2N9ECB7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS152 PE=3 SV=1)

HSP 1 Score: 379.793 bits (974), Expect = 3.236e-126
Identity = 191/393 (48.60%), Postives = 267/393 (67.94%), Query Frame = 0

Query:    3 RTIVSHKDFGLTNSKTHLGFVQNLVFIVRLISSSLPLENRSVETKENGQKRSSMVSYFMNSCGLSAKSALAASKKVSVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPSKFCEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVYRRWGWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKKDLCPCSLLVLGETKFKGSYVTKFQVKVPQLLNLYEEEMNLPDLRPG 395
            + +V ++   + +S +HLGF QN +F+V   SSS      S    ++ +K +  VSY +NSCGL  + A  AS ++  + +E  D VL LL NHGFTN QISKVV   P+++  + E+ +  K+EF GSIG+   +  K+IS+ P LL  SLKN + P Y+FLK++++L+E VV+  K ++W   +D   NLAPN+  LREIGVP S+IS F+   P  A I  +KF E+V +VK +GF+P++ +F+ AI V+     +NWE KIEVY+RWGWSKDETL AF++HP CM I+EE ITKTMDF VN+MGW S+ +++ P +LL+SLEKRI+PRCSV Q+LLSKGLIKKDL  C++L   +  F  +YVTKFQ  +PQLL +Y  + +L DL  G
Sbjct:   10 QILVPNRSIAVPSSISHLGFPQNPLFVVNYFSSS------SFVGPQDAKKHNFTVSYLVNSCGLPLERAKHASHRLHFETSESPDLVLNLLKNHGFTNAQISKVVNADPELLLSDPEKTIFLKLEFLGSIGLSHSECAKIISNCPSLLRRSLKNHIMPWYDFLKSVLLLNEKVVKTFKMVRWGLSQDVQKNLAPNLTLLREIGVPQSSISLFLSYYPSTAFIKHTKFDELVKEVKNLGFDPIKSVFVHAIHVLASHRKVNWEHKIEVYQRWGWSKDETLFAFKKHPGCMTIAEENITKTMDFLVNRMGWPSEYVSRNPIVLLFSLEKRIIPRCSVFQILLSKGLIKKDLALCTILQQKDKYFLENYVTKFQQNIPQLLEVYRGKSDLSDLGIG 396

[Close]

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. ExPASy TrEMBL
Match: A0A8J4RPR1|A0A8J4RPR1_9ROSI (Uncharacterized protein OS=Castanea mollissima OX=60419 GN=CMV_002822 PE=3 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 2.589e-120
Identity = 196/393 (49.87%), Postives = 267/393 (67.94%), Query Frame = 0

Query:   13 LTNSKTHLGFVQ-NLVFIVRLISSSLPLENRSVETKENGQKRSSMVSYFMNSCGLSAKSALAASKKVSVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGS-IGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPSKFCEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVYRRWGWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKKDLCPCSLLVLGETKFKGSYVTKFQVKVPQLLNLYEEEMNLPDLRPGFERRIGCE 403
            L +  T LGF+Q N  FIV+  +S+   E++  + ++  +K S  VSY +NSCGLS+KSAL AS+KV + N +  DSVL LL  HGF N QI+K+V  CP ++  +  + LLPKIEFF S +GV S DL ++++S+P LL  SL+N L P YNFLK+++V+DE V+  +KR + +FL D  +N+ PNIA LRE GVP S IS  V + P  A I  ++F + V+ VK MGF+P + +F+ A++VI +M    WESK+EVY+RWGWSKD  L AFRR+P C+ +SEEKITKTMDF V+KMG  S DIAK P +L  SLEKRI+PR SVVQ+LL+K LIK   C  + L+  E  F   +V KFQ   PQLL++Y+ +M+L D+    E+  G E
Sbjct:   13 LKHRMTQLGFLQQNAFFIVKSYASTGLSESK--DQQQQQEKHSFTVSYLINSCGLSSKSALLASQKVQLGNPDRPDSVLSLLKEHGFINTQIAKLVRTCPTLLLSDPGKTLLPKIEFFLSKVGVSSSDLTRILTSSPLLLVRSLENHLIPCYNFLKSVLVVDEKVITTLKRSQLSFLYDVTNNMVPNIALLREFGVPESAISFLVTNYPGIAFIKHARFVKAVHDVKEMGFDPSKSVFVLAVQVILKMKKPMWESKLEVYKRWGWSKDVALLAFRRYPNCVLLSEEKITKTMDFLVHKMGCPSADIAKNPSVLGLSLEKRIIPRFSVVQLLLAKDLIKNKFCSATFLLPSEKCFLEKFVIKFQANFPQLLDVYQGKMDLLDVGIQLEKVRGME 403

[Close]

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. ExPASy TrEMBL
Match: A0A7N2MLJ9|A0A7N2MLJ9_QUELO (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 357.836 bits (917), Expect = 1.077e-116
Identity = 193/377 (51.19%), Postives = 261/377 (69.23%), Query Frame = 0

Query:   18 THLGFVQ-NLVFIVRLISSSLPLENRSVETKENGQKRSSMVSYFMNSCGLSAKSALAASKKVSVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGS-IGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPSKFCEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVYRRWGWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKKDLCPCSLLVLGETKFKGSYVTKFQVKVPQLLNLYEEEMNLPDL 392
            T LGF+Q N  FIV+  +S+   E++  + ++  +K S  VSY +NSCGLS+KSA+ AS+KV + N +  DSVL LL  HGFTN QI+K+V   P ++  +  + LLPKIEFF S +GV S DL ++++S+P LL  SL+N L P YNFLK+++V+DE V+  +KR + +FL D  +N+ PNIA LRE GVP S IS  V + P  A I  ++F + V++VK MGF+P + +F+ AI+VI +M    WESK+EVY+RWGWSKD  L AFRR+P  + +SEEKITKTMDF V KMGW S DIAK P +L   LEKRI+PRCSVVQVLL+K LIK      + L+  E  F   +V KFQ  VPQLL++Y+ +M+L D+
Sbjct:    2 TQLGFLQQNAFFIVKSYASTGFSESKHQQRQQ--EKHSFTVSYLINSCGLSSKSAILASQKVQLGNPDRPDSVLSLLKEHGFTNTQIAKLVRTHPMLLLSDPGKTLLPKIEFFLSKVGVSSSDLTRILTSSPLLLVRSLENHLIPCYNFLKSVLVVDEKVITTLKRSQLSFLFDVTNNMIPNIALLREFGVPESAISFLVTNFPGSAFIKHARFVKAVHEVKEMGFDPSKSVFVLAIQVILKMKKPMWESKLEVYKRWGWSKDVALLAFRRNPNFVLLSEEKITKTMDFLVYKMGWPSADIAKNPSVLGLCLEKRIIPRCSVVQVLLAKDLIKSKFSSATFLLPSEKCFLEKFVIKFQASVPQLLDVYQGKMDLLDV 376

[Close]

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. ExPASy TrEMBL
Match: A0A7N2REL7|A0A7N2REL7_QUELO (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 354.755 bits (909), Expect = 5.450e-116
Identity = 193/378 (51.06%), Postives = 254/378 (67.20%), Query Frame = 0

Query:   13 LTNSKTHLGFV-QNLVFIVRLISSSLPLENRSVETKENGQKRSSMVSYFMNSCGLSAKSALAASKKVSVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPSKFCEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVYRRWGWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKKDLCPCSLLVLGETKFKGSYVTKFQVKVPQLLNLYEEEMNL 389
            L   KT LGF+ QN  FIV+  +S    ++   + +   ++ S  VSY +NSCGLS+KSAL ASK V  +N E  DSVL LL  +GFTN QISK+V + P+++    E+ LLPKIEFF S G+ S DL  +ISS P LL  SL N L P Y+FLK+++++DE V+   K  + A   D  +N+ PNI  LR+ GVP S IS F+ S P  A    SKF E V +VK MGF+PL+ +F+ A++V+ +M+    ESK+E+Y+RWGWSKD  L AF+R+P CM +SEEKITK MDF VNKMGW S  IAK P IL  SLEKRI+PRCSV+Q+LL+KGL+KKDL P   ++  E  F   +V KFQ  VPQLLN+Y+ + +L
Sbjct:   13 LKRRKTQLGFLHQNAFFIVKSFASITLSDSSHRQQQGQEEEHSFTVSYLINSCGLSSKSALLASKWVHFENPERPDSVLNLLKENGFTNTQISKLVRMRPKVLLSYPEKTLLPKIEFFRSKGISSSDLTTIISSNPSLLVSSLNNHLIPCYDFLKSVLLVDEKVLTTFKGSRGA---DVANNMIPNIELLRQHGVPQSVISLFLTSFPRIAFSNHSKFVEAVLEVKEMGFDPLKTVFVLAVQVVLKMSKEKLESKLELYKRWGWSKDVALLAFKRNPSCMALSEEKITKAMDFLVNKMGWPSAHIAKNPTILFLSLEKRIIPRCSVIQILLAKGLVKKDLGPARFIIPSERSFLERFVIKFQDDVPQLLNVYQGKKDL 387

[Close]

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. ExPASy TrEMBL
Match: A0A8J4VM94|A0A8J4VM94_9ROSI (Uncharacterized protein OS=Castanea mollissima OX=60419 GN=CMV_013140 PE=3 SV=1)

HSP 1 Score: 351.288 bits (900), Expect = 3.734e-115
Identity = 184/386 (47.67%), Postives = 251/386 (65.03%), Query Frame = 0

Query:   13 LTNSKTHLGFVQNLVFIVRLISSSLPLENRSVETKENGQKRSSMVSYFMNSCGLSAKSALAASKKVSVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPSKFCEIVNKVKAMGFNPLRGMFLKAIEVIGQMTTLNWESKIEVYRRWGWSKDETLNAFRRHPYCMRISEEKITKTMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKKDLCPCSLLVLGETKFKGSYVTKFQVKVPQLLNLYEEEMNLPDLRPGFER 398
            + +S +HLGF Q  +F+V   SS L           + +K +  VS+ +NSCGLS + A  AS +V+ + +E  + VL LL NHGFTN QISKVV   P ++  + E+ LLPK EF GSIG+   +   +IS+ P +L  S+KN L P Y+FLK+IVV DE V +  K  +     D   NLAPN+A LREIGVP S+I   +   P  A +  +KF EIV +VK +GFNP +   + AI V+  +  +NWE + EVY+RWGWSKD+TL AF++HP CM ++EE+ITK MDF VN+MGW S+ I++ P +LL+SLEKR +PRCSV Q+LLSKGL+KKDL   ++L   E  F  +YVTKFQ  +PQLL +Y+ + +L  L  G ER
Sbjct:    1 MPSSISHLGFPQIPLFVVNYFSSGLI----------DDKKHNFTVSFLVNSCGLSLERAKHASHRVNFETSERPNLVLNLLKNHGFTNAQISKVVKAEPHLLLSDPEKTLLPKFEFLGSIGLSDSECANIISACPSVLVRSIKNHLMPLYDFLKSIVVRDEKVAKTFKYARRGLSDDVQKNLAPNLAILREIGVPQSSICLLLSCFPSAAFLRHAKFDEIVKEVKNLGFNPEKSAIIHAIHVLASLRKVNWEHRFEVYQRWGWSKDQTLLAFKKHPGCMCLTEERITKAMDFLVNRMGWPSEHISRNPIVLLFSLEKRTIPRCSVFQILLSKGLVKKDLALYTILRPKEKDFLENYVTKFQQNIPQLLEVYQGKSDLLGLGIGSER 376

[Close]

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. ExPASy TrEMBL
Match: A0A067EDA5|A0A067EDA5_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g040064mg PE=3 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 1.477e-114
Identity = 170/172 (98.84%), Postives = 171/172 (99.42%), Query Frame = 0

Query:   56 MVSYFMNSCGLSAKSALAASKKVSVKNTEGADSVLRLLGNHGFTNLQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPS 227
            MVSYFMNSCGLSAKSALAASKKVS+KNTEGADSVLRLLGNHGFTNLQISKVV VCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPS
Sbjct:    1 MVSYFMNSCGLSAKSALAASKKVSIKNTEGADSVLRLLGNHGFTNLQISKVVRVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLLAVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAFLREIGVPASNISNFVISNPCGASIIPS 172

The following BLAST results are available for this feature:

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. Araport11
BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. ExPASy Swiss-Prot
BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. ExPASy TrEMBL

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. Araport11
Analysis Date: 2023-08-23 (Blastp of Citrus sinensis cv. Newhall v1.0 proteins vs Araport11)
Total hits: 10

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
\|	1.100e-92	42.49	Symbols: mTERF7 \| \| chr5:2520188-2521405 FORWARD ...	[more]
\|	1.242e-70	36.61	Symbols: mTERF27 \| \| chr1:7406406-7407578 REVERSE...	[more]
\|	1.449e-70	37.80	Symbols: mTERF27 \| \| chr1:7406406-7407770 REVERSE...	[more]
\|	1.241e-69	36.81	Symbols: mTERF27 \| \| chr1:7406406-7407770 REVERSE...	[more]
\|	1.803e-50	30.98	Symbols: mTERF32 \| \| chr1:22960326-22961639 REVER...	[more]
\|	4.684e-48	31.89	Symbols: mTERF29 \| \| chr1:22904713-22905969 FORWA...	[more]
\|	4.684e-48	31.89	Symbols: mTERF29 \| \| chr1:22904713-22905969 FORWA...	[more]
\|	4.684e-48	31.89	Symbols: mTERF29 \| \| chr1:22904713-22905969 FORWA...	[more]
\|	4.684e-48	31.89	Symbols: mTERF29 \| \| chr1:22904713-22905969 FORWA...	[more]
\|	4.684e-48	31.89	Symbols: mTERF29 \| \| chr1:22904713-22905969 FORWA...	[more]

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. ExPASy Swiss-Prot
Analysis Date: 2023-08-23 (Blastp of Citrus sinensis cv. Newhall v1.0 proteins vs UniProt Swissprot)
Total hits: 4

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
MTEFE_ARATH	8.804e-12	23.86	Transcription termination factor MTERF15, mitochon...	[more]
MTEF2_ARATH	2.863e-8	19.92	Transcription termination factor MTERF2, chloropla...	[more]
MTEF5_ARATH	2.482e-7	21.56	Transcription termination factor MTERF5, chloropla...	[more]
MTEF8_ARATH	8.985e-7	19.69	Transcription termination factor MTERF8, chloropla...	[more]

BLAST of EVM_prediction_chr2.1_tiancheng.1012 vs. ExPASy TrEMBL
Analysis Date: 2023-08-23 (Blastp of Citrus sinensis cv. Newhall v1.0 proteins vs UniProt TrEMBL)
Total hits: 10

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
V4SZA8\|V4SZA8_CITCL	0.000e+0	100.00	Uncharacterized protein OS=Citrus clementina OX=85...	[more]
V4V2V5\|V4V2V5_CITCL	0.000e+0	97.75	Uncharacterized protein OS=Citrus clementina OX=85...	[more]
A0A2H5NWU2\|A0A2H5NWU2_CITUN	0.000e+0	95.50	Uncharacterized protein OS=Citrus unshiu OX=55188 ...	[more]
A0A2N9EC15\|A0A2N9EC15_FAGSY	1.132e-127	48.60	Uncharacterized protein OS=Fagus sylvatica OX=2893...	[more]
A0A2N9ECB7\|A0A2N9ECB7_FAGSY	3.236e-126	48.60	Uncharacterized protein OS=Fagus sylvatica OX=2893...	[more]
A0A8J4RPR1\|A0A8J4RPR1_9ROSI	2.589e-120	49.87	Uncharacterized protein OS=Castanea mollissima OX=...	[more]
A0A7N2MLJ9\|A0A7N2MLJ9_QUELO	1.077e-116	51.19	Uncharacterized protein OS=Quercus lobata OX=97700...	[more]
A0A7N2REL7\|A0A7N2REL7_QUELO	5.450e-116	51.06	Uncharacterized protein OS=Quercus lobata OX=97700...	[more]
A0A8J4VM94\|A0A8J4VM94_9ROSI	3.734e-115	47.67	Uncharacterized protein OS=Castanea mollissima OX=...	[more]
A0A067EDA5\|A0A067EDA5_CITSI	1.477e-114	98.84	Uncharacterized protein (Fragment) OS=Citrus sinen...	[more]

InterPro

Analysis Name: InterProScan Analysis for Citrus sinensis cv. Newhall v1.0 proteins
Date Performed: 2023-08-08

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	FUNFAM	G3DSA:1.25.70.10:FF:000001		coord: 154..376 e-value: 5.4E-80 score: 269.8
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 152..375 e-value: 1.5E-45 score: 157.4
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 90..300 e-value: 2.1E-26 score: 92.7 coord: 263..364 e-value: 9.9E-18 score: 64.1
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 53..368

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr2.1_tiancheng:23595933..23598522-
coding sequence from alignment at chr2.1_tiancheng:23595933..23598522-

mRNA sequence

>evm.model.chr2.1_tiancheng.1012_cs-GNU_v1 ID=evm.model.chr2.1_tiancheng.1012_cs-GNU_v1; Name=EVM_prediction_chr2.1_tiancheng.1012; organism=Citrus sinensis; type=mRNA; length=1236bp
ATGCAAAGAACAATAGTTTCTCATAAAGATTTTGGTCTCACAAACTCAAA
GACCCATCTGGGTTTTGTTCAAAACTTAGTTTTTATTGTTAGGTTGATTT
CTTCATCTTTGCCTTTAGAGAATAGATCAGTAGAAACTAAAGAAAATGGA
CAAAAACGGTCCTCTATGGTCTCCTATTTCATGAACTCATGTGGGTTGTC
AGCAAAATCTGCTTTAGCTGCTTCTAAGAAAGTCAGTGTCAAGAACACAG
AAGGAGCAGACTCAGTGCTTAGGCTTCTCGGGAACCATGGTTTCACTAAT
TTGCAAATCTCTAAAGTTGTGGGAGTATGCCCCCAAATCATTGCACTTAA
TTGTGAAAGGAATCTTTTGCCCAAGATTGAGTTTTTCGGTTCTATTGGAG
TTTTGAGTGACGACCTTCCAAAGCTGATATCATCCACCCCACATCTGTTA
GCTGTGAGTTTGAAGAATCGTCTTAGTCCGAATTACAATTTCCTCAAGAA
TATAGTTGTTCTCGATGAAGTTGTTGTTAGAGTGATGAAGCGCATGAAAT
GGGCATTCCTACGCGATTTTAATAGTAATTTAGCACCAAATATTGCATTT
TTGAGAGAGATTGGTGTACCTGCATCTAACATTTCCAATTTTGTAATTAG
TAATCCATGTGGAGCATCCATTATACCTTCTAAGTTCTGCGAGATTGTCA
ATAAGGTTAAGGCAATGGGATTTAACCCCTTGCGGGGAATGTTTCTTAAA
GCTATCGAAGTGATTGGTCAAATGACAACATTGAACTGGGAATCCAAGAT
TGAGGTTTATCGGAGGTGGGGTTGGTCCAAAGATGAGACTCTTAATGCAT
TTAGAAGGCATCCTTACTGTATGCGAATATCTGAGGAGAAGATTACAAAA
ACTATGGACTTCTTTGTTAACAAAATGGGTTGGTTATCACAAGATATTGC
AAAAAGACCAGAAATTCTCCTATATAGCCTAGAGAAAAGGATTGTTCCTA
GGTGTTCTGTTGTTCAAGTTCTGCTATCCAAGGGATTGATCAAGAAGGAT
TTATGTCCATGCTCTCTCTTAGTACTTGGGGAGACAAAATTTAAGGGGAG
CTATGTAACTAAATTTCAGGTGAAAGTTCCTCAGTTATTGAATTTGTATG
AAGAAGAAATGAATCTTCCGGATTTAAGACCTGGGTTTGAGAGAAGGATT
GGATGTGAAGTCAACGGTGTCGCCGAAGACTGTTAG

protein sequence of evm.model.chr2.1_tiancheng.1012_cs-GNU_v1

>evm.model.chr2.1_tiancheng.1012_cs-GNU_v1 ID=evm.model.chr2.1_tiancheng.1012_cs-GNU_v1; Name=evm.model.chr2.1_tiancheng.1012_cs-GNU_v1; organism=Citrus sinensis; type=polypeptide; length=412bp
MQRTIVSHKDFGLTNSKTHLGFVQNLVFIVRLISSSLPLENRSVETKENG
QKRSSMVSYFMNSCGLSAKSALAASKKVSVKNTEGADSVLRLLGNHGFTN
LQISKVVGVCPQIIALNCERNLLPKIEFFGSIGVLSDDLPKLISSTPHLL
AVSLKNRLSPNYNFLKNIVVLDEVVVRVMKRMKWAFLRDFNSNLAPNIAF
LREIGVPASNISNFVISNPCGASIIPSKFCEIVNKVKAMGFNPLRGMFLK
AIEVIGQMTTLNWESKIEVYRRWGWSKDETLNAFRRHPYCMRISEEKITK
TMDFFVNKMGWLSQDIAKRPEILLYSLEKRIVPRCSVVQVLLSKGLIKKD
LCPCSLLVLGETKFKGSYVTKFQVKVPQLLNLYEEEMNLPDLRPGFERRI
GCEVNGVAEDC*

mRNA from alignment at chr2.1_tiancheng:23595933..23598522-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

> ID=; Name=; organism= ; type=; length=2590bp; location=Sequence derived from: chr2.1_tiancheng:23595933..23598522- (Citrus sinensis
ATCGCAGTGAAGGAGAACTGGGGGTGGCTGGCAAAAAGATAGAACATCAC
GAATATGGTGGCTCACTATTTTGAGGGATGATGGCTCTATTCACAGCTTC
ATCGTGTTATTATTGCACAAGGTTTGCTTCTTTTGTTTCTGCAATGAGCT
TTAATCATTCATAATTGTTTCTTTTTCCTAGGAGAATGCAAAGAACAATA
GTTTCTCATAAAGATTTTGGTCTCACAAACTCAAAGACCCATCTGGGTTT
TGTTCAAAACTTAGTTTTTATTGTTAGGTTGATTTCTTCATCTTTGCCTT
TAGAGAATAGATCAGTAGAAACTAAAGAAAATGGACAAAAACGGTCCTCT
ATGGTCTCCTATTTCATGAACTCATGTGGGTTGTCAGCAAAATCTGCTTT
AGCTGCTTCTAAGAAAGTCAGTGTCAAGAACACAGAAGGAGCAGACTCAG
TGCTTAGGCTTCTCGGGAACCATGGTTTCACTAATTTGCAAATCTCTAAA
GTTGTGGGAGTATGCCCCCAAATCATTGCACTTAATTGTGAAAGGAATCT
TTTGCCCAAGATTGAGTTTTTCGGTTCTATTGGAGTTTTGAGTGACGACC
TTCCAAAGCTGATATCATCCACCCCACATCTGTTAGCTGTGAGTTTGAAG
AATCGTCTTAGTCCGAATTACAATTTCCTCAAGAATATAGTTGTTCTCGA
TGAAGTTGTTGTTAGAGTGATGAAGCGCATGAAATGGGCATTCCTACGCG
ATTTTAATAGTAATTTAGCACCAAATATTGCATTTTTGAGAGAGATTGGT
GTACCTGCATCTAACATTTCCAATTTTGTAATTAGTAATCCATGTGGAGC
ATCCATTATACCTTCTAAGTTCTGCGAGATTGTCAATAAGGTTAAGGCAA
TGGGATTTAACCCCTTGCGGGGAATGTTTCTTAAAGCTATCGAAGTGATT
GGTCAAATGACAACATTGAACTGGGAATCCAAGATTGAGGTTTATCGGAG
GTGGGGTTGGTCCAAAGATGAGACTCTTAATGCATTTAGAAGGCATCCTT
ACTGTATGCGAATATCTGAGGAGAAGATTACAAAAACTATGGACTTCTTT
GTTAACAAAATGGGTTGGTTATCACAAGATATTGCAAAAAGACCAGAAAT
TCTCCTATATAGCCTAGAGAAAAGGATTGTTCCTAGGTGTTCTGTTGTTC
AAGTTCTGCTATCCAAGGGATTGATCAAGAAGGATTTATGTCCATGCTCT
CTCTTAGTACTTGGGGAGACAAAATTTAAGGGGAGCTATGTAACTAAATT
TCAGGTGAAAGTTCCTCAGTTATTGAATTTGTATGAAGAAGAAATGAATC
TTCCGGATTTAAGACCTGGGTTTGAGAGGTATGTGGAATAAAGCAACATA
ATTGCTTATCTTTAGTTCAACGTGTAATGTTCTCTTTCTTTGGGAGTTCG
TAGTTTCGGCATTTTTTATTTATTGGGTGTTACATTTGCATTGTTTTGTG
TGGAAGAACAAATGATTTGGTATCATGACTTTGTCAAACCTTATTCTGTA
ACATGGATACGAGTCCAAATGATTAATCTAGTAGAATTTAACACGGAAAA
TGGGAATTTACTTGGAATGTCTTTATGCATGGACTTAATGGTTCTGTTTT
TGCCTTGCTGTGGATAAATCTCTATTTATATAAGTTTGATTGAAGGGCTT
AAATATCATTAGTGTCTCTATTGGTTATTGTTAAAGCAATTGATACTGTA
TATCCTGAAAATCTGTAATTTTGTTGATTTACATGAAATATGATTTATGA
TCTTAGATCAATGGAGTTTTCGCATGAGTTTGTTAATTTCTAATACATCA
GAAGAGAGGTGTTGTATCTGCTGCGAGATAACCTTGTAACCAAATACTCA
AATAATCAACTTGGTTTCCTTTGAAGCACATTTTTCCATGTTTAGTTGCT
TTTCATGAATGTGAATAAGAATCAATAAAAACTGAAGATCGGGAAAAAAA
AGGAAAAAATCATTTGTATTCCATCCTATTCACAACATCTAAGTAACAGA
GTTAGGAATATGGTAGTGGTAATCAGACTTGAGTTTTGGTTCTTATAATA
GATTTGTGTTCTTGGATGATTCTTTTTGTTTAGCTGATTTGGTAAATAAT
ACTTTTCTTGTTTAATCGTACTGCAGAAGGATTGGATGTGAAGTCAACGG
TGTCGCCGAAGACTGTTAGTTCATTATAGTTTAAGTTAGTGCTGCAGCTG
TCAACTTCATGGATAGTGATATACTCTTGTTTAATAGGTATTCCTTGTTT
AAGGAAGTTGCAGAAATTTTTTAAACATCATTTTGTTAGTTTACATTCTT
GCTCTTGACCTTAAGCATTCTCAACTCCAGCTTCAGAGAAAAGAAGCTAA
GAAAAGAAGCAAGAAATTCTAGTCTGTTTATAATCATTATTGTCGTTAAA
AGCAATTTACAAATTCATTTTACAATCACATTGTCTTAGTGCTGAACCTG
TGTGTGCATCTTCAGAAGTCTATTTGCCTGTTTGGATTCCTTCTTTCAGG
GGGAACTAATTTTCTTATTGGTTTCACTTTTAGAATCCAA

Coding sequence (CDS) from alignment at chr2.1_tiancheng:23595933..23598522-

>evm.model.chr2.1_tiancheng.1012_cs-GNU_v1 ID=evm.model.chr2.1_tiancheng.1012_cs-GNU_v1; Name=EVM_prediction_chr2.1_tiancheng.1012; organism=Citrus sinensis; type=CDS; length=1236bp; location=Sequence derived from: chr2.1_tiancheng:23595933..23598522- (Citrus sinensis
ATGCAAAGAACAATAGTTTCTCATAAAGATTTTGGTCTCACAAACTCAAA
GACCCATCTGGGTTTTGTTCAAAACTTAGTTTTTATTGTTAGGTTGATTT
CTTCATCTTTGCCTTTAGAGAATAGATCAGTAGAAACTAAAGAAAATGGA
CAAAAACGGTCCTCTATGGTCTCCTATTTCATGAACTCATGTGGGTTGTC
AGCAAAATCTGCTTTAGCTGCTTCTAAGAAAGTCAGTGTCAAGAACACAG
AAGGAGCAGACTCAGTGCTTAGGCTTCTCGGGAACCATGGTTTCACTAAT
TTGCAAATCTCTAAAGTTGTGGGAGTATGCCCCCAAATCATTGCACTTAA
TTGTGAAAGGAATCTTTTGCCCAAGATTGAGTTTTTCGGTTCTATTGGAG
TTTTGAGTGACGACCTTCCAAAGCTGATATCATCCACCCCACATCTGTTA
GCTGTGAGTTTGAAGAATCGTCTTAGTCCGAATTACAATTTCCTCAAGAA
TATAGTTGTTCTCGATGAAGTTGTTGTTAGAGTGATGAAGCGCATGAAAT
GGGCATTCCTACGCGATTTTAATAGTAATTTAGCACCAAATATTGCATTT
TTGAGAGAGATTGGTGTACCTGCATCTAACATTTCCAATTTTGTAATTAG
TAATCCATGTGGAGCATCCATTATACCTTCTAAGTTCTGCGAGATTGTCA
ATAAGGTTAAGGCAATGGGATTTAACCCCTTGCGGGGAATGTTTCTTAAA
GCTATCGAAGTGATTGGTCAAATGACAACATTGAACTGGGAATCCAAGAT
TGAGGTTTATCGGAGGTGGGGTTGGTCCAAAGATGAGACTCTTAATGCAT
TTAGAAGGCATCCTTACTGTATGCGAATATCTGAGGAGAAGATTACAAAA
ACTATGGACTTCTTTGTTAACAAAATGGGTTGGTTATCACAAGATATTGC
AAAAAGACCAGAAATTCTCCTATATAGCCTAGAGAAAAGGATTGTTCCTA
GGTGTTCTGTTGTTCAAGTTCTGCTATCCAAGGGATTGATCAAGAAGGAT
TTATGTCCATGCTCTCTCTTAGTACTTGGGGAGACAAAATTTAAGGGGAG
CTATGTAACTAAATTTCAGGTGAAAGTTCCTCAGTTATTGAATTTGTATG
AAGAAGAAATGAATCTTCCGGATTTAAGACCTGGGTTTGAGAGAAGGATT
GGATGTGAAGTCAACGGTGTCGCCGAAGACTGTTAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR038538	MTERF_sf
IPR003690	MTERF

Vocabulary: **Molecular Function**
Term	Definition
GO:0003690	double-stranded DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of DNA-templated transcription