EVM_prediction_HIC_ASM_8.750
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of EVM_prediction_HIC_ASM_8.750 vs. ExPASy TrEMBL
Match: A0A2H5MYJ2|A0A2H5MYJ2_CITUN (Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_005410 PE=4 SV=1) HSP 1 Score: 395.586 bits (1015), Expect = 5.442e-139 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0 Query: 1 MASAVRLLHPARAGSQVQVSSSLAVPRTVVFNFNKRQNSKRYIRHSSEFSGQHKLTPVAQSSQQNDGVVPSDNEDGVSLGTLKLPGNTDLQRFESLLFQWANSLCQGANLPLPVPLKVDKIPGGARLGFITVGDGETKVLVYIDCLVFPATGGSGPIFRAIRNGPMKEKSPPGEPRIMRSLLQALQKSVEIARI 194 MASAVRLLHPARAGSQVQVSSSLAVPRTVVFNFNKRQNSKRYIRHSSEFSGQHKLTPVAQSSQQNDGVVPSDNEDGVSLGTLKLPGNTDLQRFESLLFQWANSLCQGANLPLPVPLKVDKIPGGARLGFITVGDGETKVLVYIDCLVFPATGGSGPIFRAIRNGPMKEKSPPGEPRIMRSLLQALQKSVEIARI Sbjct: 10 MASAVRLLHPARAGSQVQVSSSLAVPRTVVFNFNKRQNSKRYIRHSSEFSGQHKLTPVAQSSQQNDGVVPSDNEDGVSLGTLKLPGNTDLQRFESLLFQWANSLCQGANLPLPVPLKVDKIPGGARLGFITVGDGETKVLVYIDCLVFPATGGSGPIFRAIRNGPMKEKSPPGEPRIMRSLLQALQKSVEIARI 203
BLAST of EVM_prediction_HIC_ASM_8.750 vs. ExPASy TrEMBL
Match: A0A067G4U8|A0A067G4U8_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g040993mg PE=4 SV=1) HSP 1 Score: 393.275 bits (1009), Expect = 4.039e-138 Identity = 192/194 (98.97%), Postives = 194/194 (100.00%), Query Frame = 0 Query: 1 MASAVRLLHPARAGSQVQVSSSLAVPRTVVFNFNKRQNSKRYIRHSSEFSGQHKLTPVAQSSQQNDGVVPSDNEDGVSLGTLKLPGNTDLQRFESLLFQWANSLCQGANLPLPVPLKVDKIPGGARLGFITVGDGETKVLVYIDCLVFPATGGSGPIFRAIRNGPMKEKSPPGEPRIMRSLLQALQKSVEIARI 194 MASAVRLLHPARAGSQVQVSSSLAVPRTVVFNFNKRQNSKRYIRHSSEFSGQHKLTPVAQSSQQNDGVVPSDNEDGVSLGTLKLPGNTDLQRFESLLFQWANSLCQGANLPLPVPLKVDKIPGGARLGFITVGDGETKVLVYIDCLVFPATGGSGPIFRAIRNGP+KEKSPPGEPRIMRSLLQALQKSVEIAR+ Sbjct: 1 MASAVRLLHPARAGSQVQVSSSLAVPRTVVFNFNKRQNSKRYIRHSSEFSGQHKLTPVAQSSQQNDGVVPSDNEDGVSLGTLKLPGNTDLQRFESLLFQWANSLCQGANLPLPVPLKVDKIPGGARLGFITVGDGETKVLVYIDCLVFPATGGSGPIFRAIRNGPLKEKSPPGEPRIMRSLLQALQKSVEIARV 194
BLAST of EVM_prediction_HIC_ASM_8.750 vs. ExPASy TrEMBL
Match: A0A2C9VD38|A0A2C9VD38_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_08G027600 PE=4 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 1.769e-91 Identity = 141/197 (71.57%), Postives = 159/197 (80.71%), Query Frame = 0 Query: 1 MASAV-RLLHPARAGSQVQVSSSLAVPRTVVFNFNKRQNSKRYIRHSSEFSGQHKLTPVAQSSQQNDGVVPSD--NEDGVSLGTLKLPGNTDLQRFESLLFQWANSLCQGANLPLPVPLKVDKIPGGARLGFITVGDGETKVLVYIDCLVFPATGGSGPIFRAIRNGPMKEKSPPGEPRIMRSLLQALQKSVEIARI 194 MA A+ +LL+P RA SQ + SS +P + F +K I EF LT VA+SSQ+NDG+V +D NEDGVSLGTLKLPGNTDL RFESLLFQWANSLCQGANLPLPVPLKVDKIPGG RLGFIT+GDG+T+VLVYIDCL FPAT GSGPIFRAIRNGP+K++SPPGEPRIMRSLLQALQKSVEIAR+ Sbjct: 1 MACAMSQLLYPTRASSQAHLQSSPCLPVSRSFLITS-GGAKTRISGLVEFYCDQSLTVVAKSSQENDGIVAADDDNEDGVSLGTLKLPGNTDLNRFESLLFQWANSLCQGANLPLPVPLKVDKIPGGVRLGFITIGDGKTEVLVYIDCLAFPATSGSGPIFRAIRNGPLKDQSPPGEPRIMRSLLQALQKSVEIARV 196
BLAST of EVM_prediction_HIC_ASM_8.750 vs. ExPASy TrEMBL
Match: A0A067KZR1|A0A067KZR1_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06788 PE=4 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 4.667e-90 Identity = 138/197 (70.05%), Postives = 160/197 (81.22%), Query Frame = 0 Query: 1 MASAV-RLLHPARAGSQVQVSSSLAVPRTVVFNFNKRQNSKRYIRHSSEFSGQHKLTPVAQSSQQNDGVVPSDNED--GVSLGTLKLPGNTDLQRFESLLFQWANSLCQGANLPLPVPLKVDKIPGGARLGFITVGDGETKVLVYIDCLVFPATGGSGPIFRAIRNGPMKEKSPPGEPRIMRSLLQALQKSVEIARI 194 MA A+ +LL+P R GS +Q+S SL V R + R++ R+ R SE G LT VA+SS +NDG+V +D++ GVSLGTLKLP NTDL RFE+LLFQWANSLCQGANLPLPVPLKVDKIPGG RL FI +GDG+T+VLVYIDCLVFPAT GSGPIFRAIRNGP+K+KSPPGEPRIMRSLLQALQKSVEIAR+ Sbjct: 1 MACAMSQLLYPTRVGSHMQISPSLPVSRPCIMT--TREDKNRFFR-PSELLGYQNLTAVAKSSPENDGIVAADDDGDGGVSLGTLKLPSNTDLPRFETLLFQWANSLCQGANLPLPVPLKVDKIPGGVRLAFIEIGDGKTEVLVYIDCLVFPATAGSGPIFRAIRNGPLKDKSPPGEPRIMRSLLQALQKSVEIARV 194
BLAST of EVM_prediction_HIC_ASM_8.750 vs. ExPASy TrEMBL
Match: A0A2I4GZD1|A0A2I4GZD1_JUGRE (Uncharacterized protein LOC109012192 isoform X1 OS=Juglans regia OX=51240 GN=LOC109012192 PE=4 SV=2) HSP 1 Score: 258.07 bits (658), Expect = 1.492e-84 Identity = 133/200 (66.50%), Postives = 161/200 (80.50%), Query Frame = 0 Query: 1 MASAVRLL-HPARAGSQVQVSSS--LAVPRTVVFNFNK-RQNSKRYIRHSSEFSGQHKLTPVAQSSQQNDGVVPSDN-EDGVSLGTLKLPGNTDLQRFESLLFQWANSLCQGANLPLPVPLKVDKIPGGARLGFITVGDGETKVLVYIDCLVFPATGG-SGPIFRAIRNGPMKEKSPPGEPRIMRSLLQALQKSVEIARI 194 M A RLL HP R VQ+SS +AV R+ + + + +S R+ + S + LT V +SS ++DG+VP+D+ EDGVSLGTLKLP NTDLQRFE+LLFQWANSLCQGANLPLP+PLKVDK+PGG RLGFI++GDG+T+VLVYIDCLV+PAT SGPIFRAIRNGP+K++SPPGEPRIMRSLLQALQKSVEIAR+ Sbjct: 1 MPYAARLLPHPLRVNWHVQLSSPSPIAVSRSPLLAASWIKDHSHRFPYKLCQLSCRRSLTSVPKSSPESDGIVPADDAEDGVSLGTLKLPSNTDLQRFETLLFQWANSLCQGANLPLPIPLKVDKVPGGTRLGFISIGDGKTEVLVYIDCLVYPATANDSGPIFRAIRNGPLKDQSPPGEPRIMRSLLQALQKSVEIARV 200
BLAST of EVM_prediction_HIC_ASM_8.750 vs. ExPASy TrEMBL
Match: A0A8J4VRY2|A0A8J4VRY2_9ROSI (Uncharacterized protein OS=Castanea mollissima OX=60419 GN=CMV_005767 PE=4 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 2.061e-84 Identity = 136/199 (68.34%), Postives = 161/199 (80.90%), Query Frame = 0 Query: 1 MAS-AVRLL-HPARAGSQVQVSS---SLAVPRTVVFNFNKRQNSKRYIRHSSEFSGQHKLTPVAQSSQQNDGVVPSDNEDGVSLGTLKLPGNTDLQRFESLLFQWANSLCQGANLPLPVPLKVDKIPGGARLGFITVGDGETKVLVYIDCLVFPATGGSGPIFRAIRNGPMKEKSPPGEPRIMRSLLQALQKSVEIARI 194 MAS A RLL PAR S V +S S P + ++ +K +KR++ S Q LT VA+SS ++DG+VP+D EDGVSLGT+KLP NT+LQRFESLLFQW NSLCQGANLPLPVPLKVDKIPGGARLGFIT+GDG+T+VLVYIDCLVFPAT SGP+FRAIRNGP+K++SPPGEPRIMRSLL+AL+KSVEIAR+ Sbjct: 1 MASCAARLLFQPARVNSHVPLSPLTVSSRSPLLITWDKDKDIINKRFLFKLS----QRNLTSVAKSSPESDGIVPAD-EDGVSLGTMKLPSNTNLQRFESLLFQWGNSLCQGANLPLPVPLKVDKIPGGARLGFITIGDGKTEVLVYIDCLVFPATADSGPVFRAIRNGPLKDQSPPGEPRIMRSLLEALKKSVEIARV 194
BLAST of EVM_prediction_HIC_ASM_8.750 vs. ExPASy TrEMBL
Match: F6HKN1|F6HKN1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g02970 PE=4 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 2.700e-84 Identity = 131/196 (66.84%), Postives = 159/196 (81.12%), Query Frame = 0 Query: 1 MASAVRLL-HPARAGSQVQVSSSLAVPRTVVF-NFNKRQNSKRYIRHSSEFSGQHKLTPVAQSSQQNDGVVPSDNEDGVSLGTLKLPGNTDLQRFESLLFQWANSLCQGANLPLPVPLKVDKIPGGARLGFITVGDGETKVLVYIDCLVFPATGGSGPIFRAIRNGPMKEKSPPGEPRIMRSLLQALQKSVEIARI 194 MA+AVRL+ HP RA S V +S ++ T+VF N NK ++SK +E + L PV ++S ++ +VP + E+GVSLGT+KLP +TD+ RFESLLFQWANSLCQGANLPLPVPLKVD+I GGARLGFIT+GDG+T+VLVYIDCLVFPAT GSGP FRAIRNGP+K+ SPPGEPRIMRSLLQAL+KSVEIAR+ Sbjct: 1 MATAVRLIFHPTRAASHVHLSLPHSLSHTLVFINGNKTRSSKL-----TEIASHRHLMPVPKASPESGSIVPGE-EEGVSLGTMKLPSDTDIPRFESLLFQWANSLCQGANLPLPVPLKVDRIQGGARLGFITIGDGKTEVLVYIDCLVFPATDGSGPTFRAIRNGPLKDLSPPGEPRIMRSLLQALKKSVEIARV 190
BLAST of EVM_prediction_HIC_ASM_8.750 vs. ExPASy TrEMBL
Match: A0A438EK78|A0A438EK78_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_009656 PE=4 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 2.700e-84 Identity = 131/196 (66.84%), Postives = 159/196 (81.12%), Query Frame = 0 Query: 1 MASAVRLL-HPARAGSQVQVSSSLAVPRTVVF-NFNKRQNSKRYIRHSSEFSGQHKLTPVAQSSQQNDGVVPSDNEDGVSLGTLKLPGNTDLQRFESLLFQWANSLCQGANLPLPVPLKVDKIPGGARLGFITVGDGETKVLVYIDCLVFPATGGSGPIFRAIRNGPMKEKSPPGEPRIMRSLLQALQKSVEIARI 194 MA+AVRL+ HP RA S V +S ++ T+VF N NK ++SK +E + L PV ++S ++ +VP + E+GVSLGT+KLP +TD+ RFESLLFQWANSLCQGANLPLPVPLKVD+I GGARLGFIT+GDG+T+VLVYIDCLVFPAT GSGP FRAIRNGP+K+ SPPGEPRIMRSLLQAL+KSVEIAR+ Sbjct: 1 MATAVRLIFHPTRAASHVHLSLPHSLSHTLVFINGNKTRSSKL-----TEIASHRHLMPVPKASPESGSIVPGE-EEGVSLGTMKLPSDTDIPRFESLLFQWANSLCQGANLPLPVPLKVDRIQGGARLGFITIGDGKTEVLVYIDCLVFPATDGSGPTFRAIRNGPLKDLSPPGEPRIMRSLLQALKKSVEIARV 190
BLAST of EVM_prediction_HIC_ASM_8.750 vs. ExPASy TrEMBL
Match: A0A7N2M5R5|A0A7N2M5R5_QUELO (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 5.460e-84 Identity = 136/199 (68.34%), Postives = 160/199 (80.40%), Query Frame = 0 Query: 1 MAS-AVRLL-HPARAGSQVQVSS---SLAVPRTVVFNFNKRQNSKRYIRHSSEFSGQHKLTPVAQSSQQNDGVVPSDNEDGVSLGTLKLPGNTDLQRFESLLFQWANSLCQGANLPLPVPLKVDKIPGGARLGFITVGDGETKVLVYIDCLVFPATGGSGPIFRAIRNGPMKEKSPPGEPRIMRSLLQALQKSVEIARI 194 MAS A RLL PAR S V +S S P + ++ +K + R++ S Q LT VA+SS ++DG+VP+D EDGVSLGTLKLP NT+LQRFESLLFQW NSLCQGANLPLPVPLKVDKIPGGARLGFIT+GDG+T+VLVYIDCLVFPAT SGP+FRAIRNGP+K++SPPGEPRIMRSLL+AL+KSVEIAR+ Sbjct: 1 MASCAARLLFQPARVNSHVPLSPLTVSSRSPLLITWDKDKDIINNRFLFKLS----QRSLTSVAKSSPESDGIVPAD-EDGVSLGTLKLPSNTNLQRFESLLFQWGNSLCQGANLPLPVPLKVDKIPGGARLGFITIGDGKTEVLVYIDCLVFPATADSGPVFRAIRNGPLKDQSPPGEPRIMRSLLEALKKSVEIARV 194
BLAST of EVM_prediction_HIC_ASM_8.750 vs. ExPASy TrEMBL
Match: A0A8T1PHI1|A0A8T1PHI1_CARIL (Uncharacterized protein OS=Carya illinoinensis OX=32201 GN=CIPAW_09G016500 PE=4 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.665e-82 Identity = 132/199 (66.33%), Postives = 159/199 (79.90%), Query Frame = 0 Query: 1 MASAVRLL-HPARAGSQVQVSSS--LAVPRTVVFNFNKRQNSKRYIRHSSEFSGQHKLTPVAQSSQQNDGVVPSDN-EDGVSLGTLKLPGNTDLQRFESLLFQWANSLCQGANLPLPVPLKVDKIPGGARLGFITVGDGETKVLVYIDCLVFPATGG-SGPIFRAIRNGPMKEKSPPGEPRIMRSLLQALQKSVEIARI 194 M A RLL HP R VQ+SS +AV R+ + ++ R+ + S + LT + +SS ++DG+VP+D+ EDGVSLGTLKLP NTDLQRFESLLFQWANSLCQGANLPLPVPLKVDK+PGG RLGFI++GDG+T+VLVYIDCLV+PAT +GPIFRAIRNGP+K++SPPGEPRIMRSLLQALQKSVEIAR+ Sbjct: 1 MPYAARLLPHPLRVNWHVQLSSPSPIAVSRSPLLAAGWIKD--RFPGKLCQLSCRRSLTSMPKSSPESDGIVPADDAEDGVSLGTLKLPSNTDLQRFESLLFQWANSLCQGANLPLPVPLKVDKVPGGTRLGFISIGDGKTEVLVYIDCLVYPATANDTGPIFRAIRNGPLKDQSPPGEPRIMRSLLQALQKSVEIARV 197
BLAST of EVM_prediction_HIC_ASM_8.750 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:15168571-15169373 FORWARD LENGTH=186) HSP 1 Score: 184.111 bits (466), Expect = 2.861e-59 Identity = 98/144 (68.06%), Postives = 115/144 (79.86%), Query Frame = 0 Query: 52 QHKLTPVAQSSQQNDGVVPSDNEDGVSLGTLKLPGNTDLQRFESLLFQWANSLCQGANLPLPVPLKVDKIPGGARLGFITVGD-GETKVLVYIDCLVFPATGGSGPIFRAIRNGPMKEKSPPGEPRIMRSLLQALQKSVEIARI 194 Q K VA +S N GV ++ EDGVSLGT+KLP +TDL RFE+LLFQWANSLCQGANLPLPVPLKVD+I GGARLGFI + D G+T V VYIDCLVF T +G +F+A RNG K+K+PPGE RIMRSLL AL+K+VEIAR+ Sbjct: 44 QVKRAIVANASPGNGGV-KAEEEDGVSLGTMKLPVDTDLARFETLLFQWANSLCQGANLPLPVPLKVDRISGGARLGFIVMEDEGKTDVPVYIDCLVFQTT-ENGVVFQATRNGRKKDKAPPGEERIMRSLLGALKKAVEIARV 185 The following BLAST results are available for this feature:
BLAST of EVM_prediction_HIC_ASM_8.750 vs. ExPASy TrEMBL
Analysis Date: 2024-01-25 (Blastp of Citrus sinensis cv. Gannanzao v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of EVM_prediction_HIC_ASM_8.750 vs. ExPASy TrEMBL
Analysis Date: 2023-08-23 (Blastp of Citrus sinensis cv. Newhall v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of EVM_prediction_HIC_ASM_8.750 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Citrus sinensis cv. Gannanzao v1.0 proteins vs Araport11) Total hits: 1 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus sinensis cv. Gannanzao v1.0 proteins
Date Performed: 2024-01-25 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >evm.model.HIC_ASM_8.750-csg_v1 ID=evm.model.HIC_ASM_8.750-csg_v1; Name=EVM_prediction_HIC_ASM_8.750; organism=Citrus sinensis; type=mRNA; length=585bpback to top protein sequence of evm.model.HIC_ASM_8.750-csg_v1 >evm.model.HIC_ASM_8.750-csg_v1 ID=evm.model.HIC_ASM_8.750-csg_v1; Name=evm.model.HIC_ASM_8.750-csg_v1; organism=Citrus sinensis; type=polypeptide; length=195bpback to top mRNA from alignment at HIC_ASM_8:5291871..5294658- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=2788bp; location=Sequence derived from: HIC_ASM_8:5291871..5294658- (Citrus sinensisback to top Coding sequence (CDS) from alignment at HIC_ASM_8:5291871..5294658- >evm.model.HIC_ASM_8.750-csg_v1 ID=evm.model.HIC_ASM_8.750-csg_v1; Name=EVM_prediction_HIC_ASM_8.750; organism=Citrus sinensis; type=CDS; length=585bp; location=Sequence derived from: HIC_ASM_8:5291871..5294658- (Citrus sinensisback to top |