EVM_prediction_HIC_ASM_8.696
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of EVM_prediction_HIC_ASM_8.696 vs. ExPASy TrEMBL
Match: V4W0G5|V4W0G5_CITCL (AP2/ERF domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10014809mg PE=4 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.175e-79 Identity = 125/127 (98.43%), Postives = 126/127 (99.21%), Query Frame = 0 Query: 9 SNTLPIGGGAAKRLKEAQALETSRRREEMIALGSSFQYGSSSSSRLQAYPLMQTTPFEQPQPPLLTLQNQEISQYTQDPSFHQSYIQTQLQLHQQQQSAGSNYLQQSSQNNHFYNTYLQNNPGLLHG 135 SNTLPIGGGAAKRLKEAQALETSRRREEMIALGSSFQYGSSSSSRLQAYPLMQTTPFEQPQPPLLTLQNQEISQYTQDPSFHQSYIQTQLQLH QQQSAGSNYLQQSSQN+HFYNTYLQNNPGLLHG Sbjct: 339 SNTLPIGGGAAKRLKEAQALETSRRREEMIALGSSFQYGSSSSSRLQAYPLMQTTPFEQPQPPLLTLQNQEISQYTQDPSFHQSYIQTQLQLHHQQQSAGSNYLQQSSQNSHFYNTYLQNNPGLLHG 465
BLAST of EVM_prediction_HIC_ASM_8.696 vs. ExPASy TrEMBL
Match: A0A2H5P4B9|A0A2H5P4B9_CITUN (AP2/ERF domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_102830 PE=4 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 5.090e-79 Identity = 124/129 (96.12%), Postives = 126/129 (97.67%), Query Frame = 0 Query: 7 IVSNTLPIGGGAAKRLKEAQALETSRRREEMIALGSSFQYGSSSSSRLQAYPLMQTTPFEQPQPPLLTLQNQEISQYTQDPSFHQSYIQTQLQLHQQQQSAGSNYLQQSSQNNHFYNTYLQNNPGLLHG 135 + SNTLPIGGGAAKRLKEAQALETSRRREEMIALGSSFQYGSSSSSRLQAYPLMQTTPFEQPQPPLL LQNQEISQYTQDPSFHQSYIQTQLQLH QQQSAGSNYLQQSSQN+HFYNTYLQNNPGLLHG Sbjct: 324 LESNTLPIGGGAAKRLKEAQALETSRRREEMIALGSSFQYGSSSSSRLQAYPLMQTTPFEQPQPPLLNLQNQEISQYTQDPSFHQSYIQTQLQLHHQQQSAGSNYLQQSSQNSHFYNTYLQNNPGLLHG 452
BLAST of EVM_prediction_HIC_ASM_8.696 vs. ExPASy TrEMBL
Match: A0A2H5P4C5|A0A2H5P4C5_CITUN (AP2/ERF domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_102830 PE=4 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 6.015e-79 Identity = 124/129 (96.12%), Postives = 126/129 (97.67%), Query Frame = 0 Query: 7 IVSNTLPIGGGAAKRLKEAQALETSRRREEMIALGSSFQYGSSSSSRLQAYPLMQTTPFEQPQPPLLTLQNQEISQYTQDPSFHQSYIQTQLQLHQQQQSAGSNYLQQSSQNNHFYNTYLQNNPGLLHG 135 + SNTLPIGGGAAKRLKEAQALETSRRREEMIALGSSFQYGSSSSSRLQAYPLMQTTPFEQPQPPLL LQNQEISQYTQDPSFHQSYIQTQLQLH QQQSAGSNYLQQSSQN+HFYNTYLQNNPGLLHG Sbjct: 341 LESNTLPIGGGAAKRLKEAQALETSRRREEMIALGSSFQYGSSSSSRLQAYPLMQTTPFEQPQPPLLNLQNQEISQYTQDPSFHQSYIQTQLQLHHQQQSAGSNYLQQSSQNSHFYNTYLQNNPGLLHG 469
BLAST of EVM_prediction_HIC_ASM_8.696 vs. ExPASy TrEMBL
Match: A0A6A6MFG8|A0A6A6MFG8_HEVBR (AP2/ERF domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_027760 PE=4 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 2.686e-58 Identity = 103/127 (81.10%), Postives = 113/127 (88.98%), Query Frame = 0 Query: 9 SNTLPIGGGAAKRLKEAQALETSRRREEMIALGSSFQYGSSSSSRLQAYPLMQTTPFEQPQPPLLTLQNQEISQYTQDPSFHQSYIQTQLQLHQQQQSAGSNYLQQSSQNNHFYNTYLQNNPGLLHG 135 SNTLPIGGGAAKRLKEAQA+E+SR+REEMIALGS FQYGSSSSSRLQAY L Q PFEQPQ PLLTLQNQ+ISQY QD SFHQ+++QTQL LH QQSAG+NYLQQSSQN FYN+Y+QNNP LLHG Sbjct: 311 SNTLPIGGGAAKRLKEAQAIESSRKREEMIALGSGFQYGSSSSSRLQAYSLTQ-APFEQPQ-PLLTLQNQDISQYAQDASFHQNFLQTQLHLH--QQSAGTNYLQQSSQNPQFYNSYIQNNPALLHG 433
BLAST of EVM_prediction_HIC_ASM_8.696 vs. ExPASy TrEMBL
Match: A0A5J5C4G6|A0A5J5C4G6_9ASTE (AP2/ERF domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_001258 PE=4 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 4.572e-58 Identity = 104/127 (81.89%), Postives = 111/127 (87.40%), Query Frame = 0 Query: 9 SNTLPIGGGAAKRLKEAQALETSRRREEMIALGSSFQYGSSSSSRLQAYPLMQTTPFEQPQPPLLTLQNQEISQYTQDPSFHQSYIQTQLQLHQQQQSAGSNYLQQSSQNNHFYNTYLQNNPGLLHG 135 SNTLPIGGGAAKRLKEAQA+E+SR+REEMIALGSSFQYGS+SS+ LQAYPLMQ PFEQPQ PLLTLQNQEISQYTQDP FHQSYIQTQLQLHQQ S YL S+QN FYN+YLQNNP LLHG Sbjct: 266 SNTLPIGGGAAKRLKEAQAVESSRKREEMIALGSSFQYGSASSASLQAYPLMQ-QPFEQPQ-PLLTLQNQEISQYTQDPQFHQSYIQTQLQLHQQSGS----YLHHSNQNPQFYNSYLQNNPVLLHG 386
BLAST of EVM_prediction_HIC_ASM_8.696 vs. ExPASy TrEMBL
Match: A0A7G8AU87|A0A7G8AU87_CAMAC (AP2/ERF transcription factor OS=Camptotheca acuminata OX=16922 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 2.272e-56 Identity = 101/127 (79.53%), Postives = 110/127 (86.61%), Query Frame = 0 Query: 9 SNTLPIGGGAAKRLKEAQALETSRRREEMIALGSSFQYGSSSSSRLQAYPLMQTTPFEQPQPPLLTLQNQEISQYTQDPSFHQSYIQTQLQLHQQQQSAGSNYLQQSSQNNHFYNTYLQNNPGLLHG 135 SNTLPIGGGAAKRLKEAQA+E+SR+REEM+ALGSSFQYG+SSSS LQAYPLMQ + FEQPQ PLLTLQNQE+S YTQDP FHQSYIQTQLQLHQQ S YL S+QN FYN+YLQNNP LLHG Sbjct: 265 SNTLPIGGGAAKRLKEAQAIESSRKREEMLALGSSFQYGNSSSSSLQAYPLMQQS-FEQPQ-PLLTLQNQELSHYTQDPQFHQSYIQTQLQLHQQSGS----YLHHSNQNPQFYNSYLQNNPVLLHG 385
BLAST of EVM_prediction_HIC_ASM_8.696 vs. ExPASy TrEMBL
Match: A0A061GZ62|A0A061GZ62_THECC (AP2 domain-containing transcription factor OS=Theobroma cacao OX=3641 GN=TCM_040576 PE=4 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 3.030e-56 Identity = 103/128 (80.47%), Postives = 113/128 (88.28%), Query Frame = 0 Query: 9 SNTLPIGGGAAKRLKEAQALETSRRREEMIALGSSFQYGSSSSSRLQAYPLMQTTPFEQPQPPLLTLQNQEISQYTQD-PSFHQSYIQTQLQLHQQQQSAGSNYLQQSSQNNHFYNTYLQNNPGLLHG 135 SNTLPIGGGAAKRLKEAQALE+SR+REEMIALGSSFQYGSS+SSRLQAYPLMQ TPFEQPQ PLLTLQNQ++SQY QD SFHQ+YIQTQLQLHQQ S YL Q SQN+ FYN+++QNNP LLHG Sbjct: 337 SNTLPIGGGAAKRLKEAQALESSRKREEMIALGSSFQYGSSTSSRLQAYPLMQ-TPFEQPQ-PLLTLQNQDMSQYAQDTSSFHQNYIQTQLQLHQQSGS----YLHQPSQNSQFYNSHIQNNPALLHG 458
BLAST of EVM_prediction_HIC_ASM_8.696 vs. ExPASy TrEMBL
Match: A0A8T2Z4X0|A0A8T2Z4X0_POPDE (AP2/ERF domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_005945 PE=4 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 5.327e-56 Identity = 104/129 (80.62%), Postives = 115/129 (89.15%), Query Frame = 0 Query: 9 SNTLPIGGGAAKRLKEAQALETSRRREEMIALGSSFQYGS-SSSSRLQAYPLMQTTPFEQPQPPLLTLQNQEISQYTQDPSFHQSYIQTQLQLHQQQQSAGSNYLQ-QSSQNNHFYNTYLQNNPGLLHG 135 SNTLPIGGGAAKRLKEAQA+E+SR+REEMIALGSSF YGS SSSSRLQAYPLMQ TPFEQPQ PLLTLQNQ+ISQYTQD SFHQ+++QTQL LH QQS GSN+L QSSQN +YN+Y+QNNP LLHG Sbjct: 336 SNTLPIGGGAAKRLKEAQAIESSRKREEMIALGSSFPYGSTSSSSRLQAYPLMQ-TPFEQPQ-PLLTLQNQDISQYTQDSSFHQNFLQTQLHLH--QQSTGSNFLHNQSSQNPQYYNSYIQNNPALLHG 460
BLAST of EVM_prediction_HIC_ASM_8.696 vs. ExPASy TrEMBL
Match: A0A4U5QEL4|A0A4U5QEL4_POPAL (AP2-like ethylene-responsive transcription factor PLT1 OS=Populus alba OX=43335 GN=D5086_0000102430 PE=4 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 8.922e-55 Identity = 105/132 (79.55%), Postives = 116/132 (87.88%), Query Frame = 0 Query: 7 IVSNTLPIGGGAAKRLKEAQALETSRRREEMIALGSSFQYGS-SSSSRLQAYPLMQTTPFEQPQPPLLTLQNQEISQYTQDPSFHQSYIQTQLQLHQQQQSAGSNYLQ-QSSQNNHFYN-TYLQNNPGLLHG 135 + SNTLPIGGGAAKRLKEAQA+E+SR+REEMIALGSSF YGS SSSSRLQAYPLMQ TPFEQPQ PLLTLQNQ+ISQYTQD SFHQ+++QTQL LH QQS GSN+L QSSQN +YN TY+QNNP LLHG Sbjct: 334 LESNTLPIGGGAAKRLKEAQAIESSRKREEMIALGSSFPYGSTSSSSRLQAYPLMQ-TPFEQPQ-PLLTLQNQDISQYTQDSSFHQNFLQTQLHLH--QQSTGSNFLHNQSSQNPQYYNSTYIQNNPALLHG 461
BLAST of EVM_prediction_HIC_ASM_8.696 vs. ExPASy TrEMBL
Match: A0A8X8A4S7|A0A8X8A4S7_POPTO (AP2/ERF domain-containing protein OS=Populus tomentosa OX=118781 GN=POTOM_014623 PE=4 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 3.486e-54 Identity = 104/132 (78.79%), Postives = 116/132 (87.88%), Query Frame = 0 Query: 7 IVSNTLPIGGGAAKRLKEAQALETSRRREEMIALGSSFQYGS-SSSSRLQAYPLMQTTPFEQPQPPLLTLQNQEISQYTQDPSFHQSYIQTQLQLHQQQQSAGSNYLQ-QSSQNNHFYN-TYLQNNPGLLHG 135 + SNTLPIGGGAAKRLKEAQA+E+SR+REEMIALGSSF YGS SSSSRLQAYPLMQ TPFEQPQ PLLTLQNQ+ISQYTQD SFHQ+++QTQL LH QQS GSN+L QS+QN +YN TY+QNNP LLHG Sbjct: 337 LESNTLPIGGGAAKRLKEAQAIESSRKREEMIALGSSFPYGSTSSSSRLQAYPLMQ-TPFEQPQ-PLLTLQNQDISQYTQDSSFHQNFLQTQLHLH--QQSTGSNFLHNQSNQNPQYYNSTYIQNNPALLHG 464
BLAST of EVM_prediction_HIC_ASM_8.696 vs. ExPASy Swiss-Prot
Match: PLET1_ARATH (AP2-like ethylene-responsive transcription factor PLT1 OS=Arabidopsis thaliana OX=3702 GN=PLT1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.737e-31 Identity = 82/145 (56.55%), Postives = 94/145 (64.83%), Query Frame = 0 Query: 9 SNTLPIGGGAAKRLKEAQALETSRRRE-EMIALGSSFQYGSSSSS---------RLQAYPLMQTTPFEQPQPPLLTLQNQEISQYTQD-----PSF-HQSYIQTQLQLHQQQQSAGSNYL--QQSSQNNHFYNTYLQNNPGLLHG 135 S+TLPIGGGAAKRLKEAQALE+SR+RE EMIALGSSFQYG SS+ +LQ YPL +QP P L+LQN +IS Y + SF H SYIQTQL LHQQ +NYL Q S + YN YL +NP LLHG Sbjct: 353 SSTLPIGGGAAKRLKEAQALESSRKREAEMIALGSSFQYGGGSSTGSGSTSSRLQLQPYPL----SIQQPLEPFLSLQNNDISHYNNNNAHDSSSFNHHSYIQTQLHLHQQT----NNYLQQQSSQNSQQLYNAYLHSNPALLHG 489
BLAST of EVM_prediction_HIC_ASM_8.696 vs. ExPASy Swiss-Prot
Match: PLET2_ARATH (AP2-like ethylene-responsive transcription factor PLT2 OS=Arabidopsis thaliana OX=3702 GN=PLT2 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 8.293e-30 Identity = 94/178 (52.81%), Postives = 111/178 (62.36%), Query Frame = 0 Query: 9 SNTLPIGGGAAKRLKEAQALETSRRREEMIALGSSF-QYGSSSSS---------RLQAYPLMQTTPFE--QPQPPLLTLQ-NQEISQYTQDPSFHQSYIQTQLQLHQQQQSAGSNYLQQSSQNNHFYNTYLQNNPGLLHG--SGRDTAAGQVTDPGKQRRSSSGWAETREKDVATEKV 171 SNTLPIGGGAAKRLKEAQALE+SR+REEMIALGS+F QYG++S S +LQ YPL PFE PLLTLQ N +ISQY SF SYIQTQL Q +NYLQ SS + YN YLQ+NPGLLHG S + +G + + G SSS + E++ KV Sbjct: 362 SNTLPIGGGAAKRLKEAQALESSRKREEMIALGSNFHQYGAASGSSSVASSSRLQLQPYPLSIQQPFEHLHHHQPLLTLQNNNDISQYHD--SF--SYIQTQL---HLHQQQTNNYLQSSSHTSQLYNAYLQSNPGLLHGFVSDNNNTSGFLGNNGIGIGSSSTVGSSAEEEFPAVKV 532
BLAST of EVM_prediction_HIC_ASM_8.696 vs. Araport11
Match: | (Symbols: AtPLT1, PLT1 | PLETHORA 1 | chr3:7300764-7303370 FORWARD LENGTH=574) HSP 1 Score: 120.939 bits (302), Expect = 5.846e-32 Identity = 82/145 (56.55%), Postives = 94/145 (64.83%), Query Frame = 0 Query: 9 SNTLPIGGGAAKRLKEAQALETSRRRE-EMIALGSSFQYGSSSSS---------RLQAYPLMQTTPFEQPQPPLLTLQNQEISQYTQD-----PSF-HQSYIQTQLQLHQQQQSAGSNYL--QQSSQNNHFYNTYLQNNPGLLHG 135 S+TLPIGGGAAKRLKEAQALE+SR+RE EMIALGSSFQYG SS+ +LQ YPL +QP P L+LQN +IS Y + SF H SYIQTQL LHQQ +NYL Q S + YN YL +NP LLHG Sbjct: 353 SSTLPIGGGAAKRLKEAQALESSRKREAEMIALGSSFQYGGGSSTGSGSTSSRLQLQPYPL----SIQQPLEPFLSLQNNDISHYNNNNAHDSSSFNHHSYIQTQLHLHQQT----NNYLQQQSSQNSQQLYNAYLHSNPALLHG 489
BLAST of EVM_prediction_HIC_ASM_8.696 vs. Araport11
Match: | (Symbols: PLT2 | PLETHORA 2 | chr1:18977517-18980305 FORWARD LENGTH=568) HSP 1 Score: 117.857 bits (294), Expect = 8.448e-31 Identity = 94/178 (52.81%), Postives = 111/178 (62.36%), Query Frame = 0 Query: 9 SNTLPIGGGAAKRLKEAQALETSRRREEMIALGSSF-QYGSSSSS---------RLQAYPLMQTTPFE--QPQPPLLTLQ-NQEISQYTQDPSFHQSYIQTQLQLHQQQQSAGSNYLQQSSQNNHFYNTYLQNNPGLLHG--SGRDTAAGQVTDPGKQRRSSSGWAETREKDVATEKV 171 SNTLPIGGGAAKRLKEAQALE+SR+REEMIALGS+F QYG++S S +LQ YPL PFE PLLTLQ N +ISQY SF SYIQTQL Q +NYLQ SS + YN YLQ+NPGLLHG S + +G + + G SSS + E++ KV Sbjct: 362 SNTLPIGGGAAKRLKEAQALESSRKREEMIALGSNFHQYGAASGSSSVASSSRLQLQPYPLSIQQPFEHLHHHQPLLTLQNNNDISQYHD--SF--SYIQTQL---HLHQQQTNNYLQSSSHTSQLYNAYLQSNPGLLHGFVSDNNNTSGFLGNNGIGIGSSSTVGSSAEEEFPAVKV 532 The following BLAST results are available for this feature:
BLAST of EVM_prediction_HIC_ASM_8.696 vs. ExPASy TrEMBL
Analysis Date: 2024-01-25 (Blastp of Citrus sinensis cv. Gannanzao v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of EVM_prediction_HIC_ASM_8.696 vs. ExPASy Swiss-Prot
Analysis Date: 2023-08-23 (Blastp of Citrus sinensis cv. Newhall v1.0 proteins vs UniProt Swissprot) Total hits: 2 Position : 0 Zoom : x 1
BLAST of EVM_prediction_HIC_ASM_8.696 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Citrus sinensis cv. Gannanzao v1.0 proteins vs Araport11) Total hits: 2 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >evm.model.HIC_ASM_8.696-csg_v1 ID=evm.model.HIC_ASM_8.696-csg_v1; Name=EVM_prediction_HIC_ASM_8.696; organism=Citrus sinensis; type=mRNA; length=561bpback to top protein sequence of evm.model.HIC_ASM_8.696-csg_v1 >evm.model.HIC_ASM_8.696-csg_v1 ID=evm.model.HIC_ASM_8.696-csg_v1; Name=evm.model.HIC_ASM_8.696-csg_v1; organism=Citrus sinensis; type=polypeptide; length=187bpback to top mRNA from alignment at HIC_ASM_8:4945166..4945861- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=696bp; location=Sequence derived from: HIC_ASM_8:4945166..4945861- (Citrus sinensisback to top Coding sequence (CDS) from alignment at HIC_ASM_8:4945166..4945861- >evm.model.HIC_ASM_8.696-csg_v1 ID=evm.model.HIC_ASM_8.696-csg_v1; Name=EVM_prediction_HIC_ASM_8.696; organism=Citrus sinensis; type=CDS; length=561bp; location=Sequence derived from: HIC_ASM_8:4945166..4945861- (Citrus sinensisback to top |