EVM_prediction_HIC_ASM_8.597 | Citrus Genome Database

Transcript Overview


Name	EVM_prediction_HIC_ASM_8.597
Unique Name	evm.model.HIC_ASM_8.597-csg_v1
Type	mRNA
Organism	Citrus sinensis (Sweet orange)
Sequence length	213

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Citrus sinensis cv. Gannanzao v1.0 genome	2023-12-14
InterProScan Analysis for Citrus sinensis cv. Gannanzao v1.0 proteins	2024-01-25
Blastp of Citrus sinensis cv. Gannanzao v1.0 proteins vs UniProt TrEMBL	2024-01-25
Blastp of Citrus sinensis cv. Newhall v1.0 proteins vs UniProt Swissprot	2023-08-23
Blastp of Citrus sinensis cv. Gannanzao v1.0 proteins vs Araport11	2024-01-25

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
ccrcsgL233	Citrus australasica CRC3672 genome v1	Citrus australasica
ccrcsgL538	Citrus australasica CRC3672 genome v1	Citrus australasica
csgdvaR052	Citrus sinensis cv. Valencia DVS_A genome v1.0	Citrus sinensis
csgdvbR056	Citrus sinensis cv. Valencia DVS_B genome v1.0	Citrus sinensis
csgfhsR088	Fortunella hindsii S3y-45 genome v2.0	Fortunella hindsii
csgswoR071	Citrus sinensis Di-Haploid Sweet Orange (DHSO) v3.0 (HZAU)	Citrus sinensis
csgzkR125	Poncirus trifoliata acc. ZK8 v1.0 (HZAU)	Poncirus trifoliata

Orthologs


Gene/Transcript	Assembly	Species
Cau_v1.primary_g18690.t1	Citrus australasica CRC3672 genome v1	Citrus australasica
Fh6g20860.1	Fortunella hindsii S3y-45 genome v2.0	Fortunella hindsii
Pt6g006360.1	Poncirus trifoliata acc. ZK8 v1.0 (HZAU)	Poncirus trifoliata

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
gene-KPL70_018647-mRNA1	Citrus sinensis cv. Valencia DVS_A genome v1.0	Citrus sinensis
Cs_ont_6g007000.1	Citrus sinensis Di-Haploid Sweet Orange (DHSO) v3.0 (HZAU)	Citrus sinensis
gene-KPL71_018825-mRNA1	Citrus sinensis cv. Valencia DVS_B genome v1.0	Citrus sinensis

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EVM_prediction_HIC_ASM_8.597	evm.TU.HIC_ASM_8.597-csg_v1	Citrus sinensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
evm.model.HIC_ASM_8.597.exon1-csg_v1	evm.model.HIC_ASM_8.597.exon1-csg_v1	Citrus sinensis	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
cds.evm.model.HIC_ASM_8.597-csg_v1	cds.evm.model.HIC_ASM_8.597-csg_v1	Citrus sinensis	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
evm.model.HIC_ASM_8.597-csg_v1	evm.model.HIC_ASM_8.597-csg_v1	Citrus sinensis	polypeptide
evm.model.HIC_ASM_8.597-csg_v1	evm.model.HIC_ASM_8.597-csg_v1-protein	Citrus sinensis	polypeptide

Homology

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BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy TrEMBL
Match: A0A067EQ47|A0A067EQ47_CITSI (AMP-dependent synthetase/ligase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g038104mg PE=4 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.760e-37
Identity = 66/70 (94.29%), Postives = 66/70 (94.29%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVSYF 70
            MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEG RFNWLQTYDRCRRLASSLRSLNMPKH VVS  
Sbjct:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVL 70

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy TrEMBL
Match: A0A2H5MZ88|A0A2H5MZ88_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_006830 PE=4 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.834e-37
Identity = 66/70 (94.29%), Postives = 66/70 (94.29%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVSYF 70
            MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEG RFNWLQTYDRCRRLASSLRSLNMPKH VVS  
Sbjct:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGARFNWLQTYDRCRRLASSLRSLNMPKHSVVSVL 70

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy TrEMBL
Match: V4S7Y8|V4S7Y8_CITCL (AMP-dependent synthetase/ligase domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10011382mg PE=4 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 2.073e-37
Identity = 66/70 (94.29%), Postives = 67/70 (95.71%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVSYF 70
            MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSL+MPKH VVS  
Sbjct:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLSMPKHSVVSVL 70

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy TrEMBL
Match: A0A5C7IKQ0|A0A5C7IKQ0_9ROSI (4-coumarate--CoA ligase OS=Acer yangbiense OX=1000413 GN=EZV62_004788 PE=4 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.301e-29
Identity = 56/70 (80.00%), Postives = 62/70 (88.57%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVSYF 70
            M+ LSKCEANYVPL+PLTFLKRAA++Y NRTSIIYEGTRF W QTYDRCRRLASSLRSLN+ K+ VVS  
Sbjct:    1 MENLSKCEANYVPLTPLTFLKRAASIYANRTSIIYEGTRFTWRQTYDRCRRLASSLRSLNVVKNTVVSVL 70

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy TrEMBL
Match: A0A1Q3B155|A0A1Q3B155_CEPFO (AMP-binding domain-containing protein/DUF4009 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_05262 PE=4 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.535e-28
Identity = 53/68 (77.94%), Postives = 59/68 (86.76%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVS 68
            MD L KC+ANYVPL+PLTFLKRAAA Y NR S+IYEGTRF WLQTY+RC RLASSLRSLN+ K+ VVS
Sbjct:    1 MDLLPKCDANYVPLTPLTFLKRAAACYANRDSVIYEGTRFTWLQTYERCCRLASSLRSLNIVKNNVVS 68

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy TrEMBL
Match: A0A6I9QGG3|A0A6I9QGG3_ELAGV (Butyrate--CoA ligase AAE11, peroxisomal OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105035081 PE=4 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.782e-28
Identity = 52/68 (76.47%), Postives = 59/68 (86.76%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVS 68
            MD+L KCEANY PLSP+TFL+RAA VY +RTS+IYE TRF W QTYDRCRRLASSLRSLN+ K+ VVS
Sbjct:    1 MDRLPKCEANYGPLSPVTFLERAAKVYADRTSVIYENTRFTWKQTYDRCRRLASSLRSLNISKNDVVS 68

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy TrEMBL
Match: A0A5B6VRB8|A0A5B6VRB8_9ROSI (Butyrate--CoA ligase AAE11, peroxisomal-like OS=Gossypium australe OX=47621 GN=EPI10_017064 PE=4 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.568e-28
Identity = 53/68 (77.94%), Postives = 59/68 (86.76%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVS 68
            MD+LSKCEANYVPL+PLTFLKRA +VY NRTSIIYE TRF W QTY+RC RLASSLRSLN+  + VVS
Sbjct:    1 MDRLSKCEANYVPLTPLTFLKRAGSVYANRTSIIYENTRFTWRQTYERCCRLASSLRSLNILNNHVVS 68

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy TrEMBL
Match: A0A834GBQ9|A0A834GBQ9_RHOSS (4-coumarate--CoA ligase OS=Rhododendron simsii OX=118357 GN=RHSIM_Rhsim10G0185800 PE=4 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.145e-28
Identity = 52/68 (76.47%), Postives = 59/68 (86.76%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVS 68
            MD+L KCEANYV L+PLTFLKRA+AVY NRTSIIY GTRF W QTY+RCRR+A SLRSLN+ K+ VVS
Sbjct:    1 MDRLPKCEANYVSLTPLTFLKRASAVYANRTSIIYAGTRFTWRQTYERCRRIACSLRSLNVVKNDVVS 68

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy TrEMBL
Match: A0A061EFH9|A0A061EFH9_THECC (AMP-dependent synthetase and ligase family protein OS=Theobroma cacao OX=3641 GN=TCM_017664 PE=4 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.733e-28
Identity = 54/70 (77.14%), Postives = 61/70 (87.14%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVSYF 70
            MDKLSKC ANYVPL+PLTFLKRA++VY NRTS+IYE TRF WLQTY+RC RLASSLRSLN+ K+ VVS  
Sbjct:   60 MDKLSKCNANYVPLTPLTFLKRASSVYANRTSVIYENTRFTWLQTYERCCRLASSLRSLNIVKNDVVSVL 129

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy TrEMBL
Match: A0A7J7I0H8|A0A7J7I0H8_CAMSI (4-coumarate--CoA ligase OS=Camellia sinensis OX=4442 GN=HYC85_005161 PE=4 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.125e-27
Identity = 53/68 (77.94%), Postives = 59/68 (86.76%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVS 68
            M+KL KCEANYVPL+PLTFLKRAA VY NRTS+IY  TRF WLQTY+RC RLASSLRSLN+ K+ VVS
Sbjct:    1 MEKLFKCEANYVPLTPLTFLKRAAKVYSNRTSVIYGRTRFTWLQTYERCLRLASSLRSLNIFKNNVVS 68

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy Swiss-Prot
Match: CNL_PETHY (Trans-cinnamate:CoA ligase, peroxisomal OS=Petunia hybrida OX=4102 GN=CNL PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.679e-26
Identity = 48/68 (70.59%), Postives = 53/68 (77.94%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVS 68
            MD+L KC ANYVPL+PLTFL RA   Y NRTSIIY G RF W QTY RC RLASSL+SLN+ K+ VVS
Sbjct:    1 MDELPKCGANYVPLTPLTFLTRAFKSYANRTSIIYAGARFTWEQTYKRCCRLASSLQSLNIVKNDVVS 68

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy Swiss-Prot
Match: AAE20_ARATH (Benzoate--CoA ligase, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=AAE20 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.720e-25
Identity = 47/68 (69.12%), Postives = 54/68 (79.41%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVS 68
            MD L+ CEAN VPL+P+TFLKRA+  Y NRTSIIY  TRF W QTYDRC RLA+SL SLN+ K+ VVS
Sbjct:    1 MDDLALCEANNVPLTPMTFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLISLNISKNDVVS 68

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy Swiss-Prot
Match: AAE12_ARATH (Probable acyl-activating enzyme 12, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=AAE12 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 5.885e-25
Identity = 47/68 (69.12%), Postives = 54/68 (79.41%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVS 68
            MD L+ CEAN VPL+P+TFLKRA+  Y NRTSIIY  TRF W QTYDRC RLA+SL SLN+ K+ VVS
Sbjct:    1 MDNLALCEANNVPLTPITFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLISLNIGKNDVVS 68

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy Swiss-Prot
Match: AEE22_ARATH (Probable acyl-activating enzyme 22 OS=Arabidopsis thaliana OX=3702 GN=AEE22 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 7.146e-25
Identity = 46/68 (67.65%), Postives = 53/68 (77.94%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVS 68
            MD +  CEAN VPL+P+TFLKRA+  Y NRTSIIY  TRF W QTYDRC RLA+SL SLN+ K+ VVS
Sbjct:    1 MDNMELCEANNVPLTPITFLKRASECYPNRTSIIYGQTRFTWPQTYDRCCRLAASLISLNIAKNDVVS 68

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy Swiss-Prot
Match: AAE11_ARATH (Butyrate--CoA ligase AAE11, peroxisomal OS=Arabidopsis thaliana OX=3702 GN=AAE11 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.513e-24
Identity = 46/68 (67.65%), Postives = 53/68 (77.94%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVS 68
            MD L  CEAN VPL+P+TFLKRA+  Y NRTSIIY  TRF W QTYDRC RLA+SL SLN+ ++ VVS
Sbjct:    1 MDNLVLCEANNVPLTPITFLKRASECYPNRTSIIYGQTRFTWPQTYDRCCRLAASLLSLNITRNDVVS 68

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy Swiss-Prot
Match: AEE21_ARATH (Probable acyl-activating enzyme 21 OS=Arabidopsis thaliana OX=3702 GN=AEE21 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.293e-20
Identity = 36/68 (52.94%), Postives = 51/68 (75.00%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVS 68
            M+   +C ANYVPLSP++FL+RAA V+G+RTS++Y   ++ W QT DRC RLAS+L  L + +H VV+
Sbjct:    1 MEGTMRCSANYVPLSPISFLERAAVVFGSRTSVVYGDIQYTWHQTRDRCVRLASALSDLGLSRHDVVA 68

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy Swiss-Prot
Match: AAE1_ARATH (Butanoate--CoA ligase AAE1 OS=Arabidopsis thaliana OX=3702 GN=AAE1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.156e-16
Identity = 33/68 (48.53%), Postives = 45/68 (66.18%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVS 68
            M+   K  ANYVPL+P++FL R+A VY +R SI+Y   ++ W QT DRC R+AS+L  L +    VVS
Sbjct:    3 MEGTIKSPANYVPLTPISFLDRSAVVYADRVSIVYGSVKYTWRQTRDRCVRIASALSQLGISTGDVVS 70

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy Swiss-Prot
Match: AAE2_ARATH (Isovalerate--CoA ligase AAE2 OS=Arabidopsis thaliana OX=3702 GN=AAE2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.264e-15
Identity = 31/68 (45.59%), Postives = 48/68 (70.59%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVS 68
            ++ L +  AN+ PLSP+TFL+R+A VY +RTS+++   +  W QTY RC RLAS+L +L + +  VV+
Sbjct:   48 IEGLLRSPANFSPLSPITFLERSAKVYRDRTSLVFGSVKHTWFQTYQRCLRLASALTNLGISRGDVVA 115

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy Swiss-Prot
Match: CCL2_HUMLU (Isovalerate--CoA ligase CCL2 OS=Humulus lupulus OX=3486 GN=CCL2 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.157e-15
Identity = 32/71 (45.07%), Postives = 49/71 (69.01%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRS-LNMPKHGVVSYF 70
            M+ L +C AN+VPLSP+TFL+R++  Y + TS++Y   R+ W QT+ RC +LAS+L + L +    VV+ F
Sbjct:   29 MEGLVQCSANHVPLSPITFLERSSKAYRDNTSLVYGSVRYTWAQTHHRCLKLASALTTHLGISPGDVVATF 99

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy Swiss-Prot
Match: CCL13_HUMLU (Probable CoA ligase CCL13 OS=Humulus lupulus OX=3486 GN=CCL13 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.722e-14
Identity = 28/58 (48.28%), Postives = 43/58 (74.14%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRS 58
            M+ L +C AN+VPLSP+TFL+R++  Y + TS++Y   R+ W QT+ RC +LAS+L +
Sbjct:   29 MEGLVQCSANHVPLSPITFLERSSKAYRDNTSLVYGSVRYTWAQTHHRCLKLASALTT 86

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. Araport11
Match: | (Symbols: BZO1 | benzoyloxyglucosinolate 1 | chr1:24508633-24510737 REVERSE LENGTH=580)

HSP 1 Score: 99.3673 bits (246), Expect = 3.777e-26
Identity = 47/68 (69.12%), Postives = 54/68 (79.41%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVS 68
            MD L+ CEAN VPL+P+TFLKRA+  Y NRTSIIY  TRF W QTYDRC RLA+SL SLN+ K+ VVS
Sbjct:    1 MDDLALCEANNVPLTPMTFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLISLNISKNDVVS 68

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. Araport11
Match: | (Symbols: AAE12 | acyl activating enzyme 12 | chr1:24512598-24514611 REVERSE LENGTH=578)

HSP 1 Score: 98.9821 bits (245), Expect = 5.974e-26
Identity = 47/68 (69.12%), Postives = 54/68 (79.41%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVS 68
            MD L+ CEAN VPL+P+TFLKRA+  Y NRTSIIY  TRF W QTYDRC RLA+SL SLN+ K+ VVS
Sbjct:    1 MDNLALCEANNVPLTPITFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLISLNIGKNDVVS 68

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:25588191-25590254 REVERSE LENGTH=535)

HSP 1 Score: 98.5969 bits (244), Expect = 7.263e-26
Identity = 46/68 (67.65%), Postives = 53/68 (77.94%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVS 68
            MD +  CEAN VPL+P+TFLKRA+  Y NRTSIIY  TRF W QTYDRC RLA+SL SLN+ K+ VVS
Sbjct:    1 MDNMELCEANNVPLTPITFLKRASECYPNRTSIIYGQTRFTWPQTYDRCCRLAASLISLNIAKNDVVS 68

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. Araport11
Match: | (Symbols: AtAAE11, AAE11 | acyl-activating enzyme 11 | chr1:24612640-24614690 FORWARD LENGTH=572)

HSP 1 Score: 97.8265 bits (242), Expect = 1.536e-25
Identity = 46/68 (67.65%), Postives = 53/68 (77.94%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVS 68
            MD L  CEAN VPL+P+TFLKRA+  Y NRTSIIY  TRF W QTYDRC RLA+SL SLN+ ++ VVS
Sbjct:    1 MDNLVLCEANNVPLTPITFLKRASECYPNRTSIIYGQTRFTWPQTYDRCCRLAASLLSLNITRNDVVS 68

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr1:28623443-28625408 REVERSE LENGTH=546)

HSP 1 Score: 84.7297 bits (208), Expect = 6.384e-21
Identity = 36/68 (52.94%), Postives = 51/68 (75.00%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVS 68
            M+   +C ANYVPLSP++FL+RAA V+G+RTS++Y   ++ W QT DRC RLAS+L  L + +H VV+
Sbjct:    1 MEGTMRCSANYVPLSPISFLERAAVVFGSRTSVVYGDIQYTWHQTRDRCVRLASALSDLGLSRHDVVA 68

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. Araport11
Match: | (Symbols: AAE1 | acyl activating enzyme 1 | chr1:7119927-7121730 REVERSE LENGTH=556)

HSP 1 Score: 74.7146 bits (182), Expect = 2.186e-17
Identity = 33/68 (48.53%), Postives = 45/68 (66.18%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVS 68
            M+   K  ANYVPL+P++FL R+A VY +R SI+Y   ++ W QT DRC R+AS+L  L +    VVS
Sbjct:    3 MEGTIKSPANYVPLTPISFLDRSAVVYADRVSIVYGSVKYTWRQTRDRCVRIASALSQLGISTGDVVS 70

[Close]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr2:7671041-7672936 FORWARD LENGTH=603)

HSP 1 Score: 72.4034 bits (176), Expect = 1.282e-16
Identity = 31/68 (45.59%), Postives = 48/68 (70.59%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVS 68
            ++ L +  AN+ PLSP+TFL+R+A VY +RTS+++   +  W QTY RC RLAS+L +L + +  VV+
Sbjct:   48 IEGLLRSPANFSPLSPITFLERSAKVYRDRTSLVFGSVKHTWFQTYQRCLRLASALTNLGISRGDVVA 115

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BLAST of EVM_prediction_HIC_ASM_8.597 vs. Araport11
Match: | (Symbols: AAE7, BZU1, ACN1 | acyl-activating enzyme 7, ACETATE NON-UTILIZING 1 | chr3:5773231-5775411 REVERSE LENGTH=569)

HSP 1 Score: 68.9366 bits (167), Expect = 2.480e-15
Identity = 31/56 (55.36%), Postives = 38/56 (67.86%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCRRLASSL 56
            +D L K  ANY  L+PL FL RAA V+  R S+I+    + W QTYDRCRRLAS+L
Sbjct:    9 IDDLPKIPANYTALTPLWFLDRAAVVHPTRKSVIHGSREYTWRQTYDRCRRLASAL 64

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BLAST of EVM_prediction_HIC_ASM_8.597 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:5349255-5350907 REVERSE LENGTH=550)

HSP 1 Score: 68.1662 bits (165), Expect = 3.995e-15
Identity = 33/69 (47.83%), Postives = 47/69 (68.12%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIY-EGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVS 68
            M+++  C AN  PL+P+ FL+RAA VYG+ TSI+Y   T + W +T  RC R+ASSL S+ + +  VVS
Sbjct:    1 MEEMKPCAANSPPLTPIGFLERAATVYGDCTSIVYGSNTVYTWRETNLRCLRVASSLSSIGIGRSDVVS 69

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BLAST of EVM_prediction_HIC_ASM_8.597 vs. Araport11
Match: | (Symbols: AAE5 | acyl activating enzyme 5 | chr5:5356823-5358481 REVERSE LENGTH=552)

HSP 1 Score: 66.6254 bits (161), Expect = 1.492e-14
Identity = 33/71 (46.48%), Postives = 47/71 (66.20%), Query Frame = 0

Query:    1 MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIY-EGTRFNWLQTYDRCRRLASSLRSLNMPKHGVVSYF 70
            M+++  C AN  PL+P+ FL+RAA VYG+ TSI+Y   T + W +T  RC R+ASSL S+ + +  VVS  
Sbjct:    1 MEQMKPCAANSPPLTPIGFLERAATVYGDCTSIVYGSNTVYTWRETNLRCLRVASSLSSIGIGRSDVVSVL 71

The following BLAST results are available for this feature:

BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy TrEMBL
BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy Swiss-Prot
BLAST of EVM_prediction_HIC_ASM_8.597 vs. Araport11

BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy TrEMBL
Analysis Date: 2024-01-25 (Blastp of Citrus sinensis cv. Gannanzao v1.0 proteins vs UniProt TrEMBL)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
A0A067EQ47\|A0A067EQ47_CITSI	1.760e-37	94.29	AMP-dependent synthetase/ligase domain-containing ...	[more]
A0A2H5MZ88\|A0A2H5MZ88_CITUN	1.834e-37	94.29	Uncharacterized protein OS=Citrus unshiu OX=55188 ...	[more]
V4S7Y8\|V4S7Y8_CITCL	2.073e-37	94.29	AMP-dependent synthetase/ligase domain-containing ...	[more]
A0A5C7IKQ0\|A0A5C7IKQ0_9ROSI	1.301e-29	80.00	4-coumarate--CoA ligase OS=Acer yangbiense OX=1000...	[more]
A0A1Q3B155\|A0A1Q3B155_CEPFO	1.535e-28	77.94	AMP-binding domain-containing protein/DUF4009 doma...	[more]
A0A6I9QGG3\|A0A6I9QGG3_ELAGV	2.782e-28	76.47	Butyrate--CoA ligase AAE11, peroxisomal OS=Elaeis ...	[more]
A0A5B6VRB8\|A0A5B6VRB8_9ROSI	3.568e-28	77.94	Butyrate--CoA ligase AAE11, peroxisomal-like OS=Go...	[more]
A0A834GBQ9\|A0A834GBQ9_RHOSS	4.145e-28	76.47	4-coumarate--CoA ligase OS=Rhododendron simsii OX=...	[more]
A0A061EFH9\|A0A061EFH9_THECC	6.733e-28	77.14	AMP-dependent synthetase and ligase family protein...	[more]
A0A7J7I0H8\|A0A7J7I0H8_CAMSI	1.125e-27	77.94	4-coumarate--CoA ligase OS=Camellia sinensis OX=44...	[more]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. ExPASy Swiss-Prot
Analysis Date: 2023-08-23 (Blastp of Citrus sinensis cv. Newhall v1.0 proteins vs UniProt Swissprot)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
CNL_PETHY	3.679e-26	70.59	Trans-cinnamate:CoA ligase, peroxisomal OS=Petunia...	[more]
AAE20_ARATH	3.720e-25	69.12	Benzoate--CoA ligase, peroxisomal OS=Arabidopsis t...	[more]
AAE12_ARATH	5.885e-25	69.12	Probable acyl-activating enzyme 12, peroxisomal OS...	[more]
AEE22_ARATH	7.146e-25	67.65	Probable acyl-activating enzyme 22 OS=Arabidopsis ...	[more]
AAE11_ARATH	1.513e-24	67.65	Butyrate--CoA ligase AAE11, peroxisomal OS=Arabido...	[more]
AEE21_ARATH	6.293e-20	52.94	Probable acyl-activating enzyme 21 OS=Arabidopsis ...	[more]
AAE1_ARATH	2.156e-16	48.53	Butanoate--CoA ligase AAE1 OS=Arabidopsis thaliana...	[more]
AAE2_ARATH	1.264e-15	45.59	Isovalerate--CoA ligase AAE2 OS=Arabidopsis thalia...	[more]
CCL2_HUMLU	7.157e-15	45.07	Isovalerate--CoA ligase CCL2 OS=Humulus lupulus OX...	[more]
CCL13_HUMLU	1.722e-14	48.28	Probable CoA ligase CCL13 OS=Humulus lupulus OX=34...	[more]

BLAST of EVM_prediction_HIC_ASM_8.597 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Citrus sinensis cv. Gannanzao v1.0 proteins vs Araport11)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
\|	3.777e-26	69.12	Symbols: BZO1 \| benzoyloxyglucosinolate 1 \| chr1:2...	[more]
\|	5.974e-26	69.12	Symbols: AAE12 \| acyl activating enzyme 12 \| chr1:...	[more]
\|	7.263e-26	67.65	Symbols: no symbol available \| no full name availa...	[more]
\|	1.536e-25	67.65	Symbols: AtAAE11, AAE11 \| acyl-activating enzyme 1...	[more]
\|	6.384e-21	52.94	Symbols: no symbol available \| no full name availa...	[more]
\|	2.186e-17	48.53	Symbols: AAE1 \| acyl activating enzyme 1 \| chr1:71...	[more]
\|	1.282e-16	45.59	Symbols: no symbol available \| no full name availa...	[more]
\|	2.480e-15	55.36	Symbols: AAE7, BZU1, ACN1 \| acyl-activating enzyme...	[more]
\|	3.995e-15	47.83	Symbols: no symbol available \| no full name availa...	[more]
\|	1.492e-14	46.48	Symbols: AAE5 \| acyl activating enzyme 5 \| chr5:53...	[more]

InterPro

Analysis Name: InterProScan Analysis for Citrus sinensis cv. Gannanzao v1.0 proteins
Date Performed: 2024-01-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.980		coord: 10..70 e-value: 9.9E-7 score: 30.5
None	No IPR available	PANTHER	PTHR43859	ACYL-ACTIVATING ENZYME	coord: 1..68
None	No IPR available	SUPERFAMILY	56801	Acetyl-CoA synthetase-like	coord: 8..68

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at HIC_ASM_8:4050098..4050310+
coding sequence from alignment at HIC_ASM_8:4050098..4050310+

mRNA sequence

>evm.model.HIC_ASM_8.597-csg_v1 ID=evm.model.HIC_ASM_8.597-csg_v1; Name=EVM_prediction_HIC_ASM_8.597; organism=Citrus sinensis; type=mRNA; length=213bp
ATGGATAAGCTTTCAAAGTGTGAAGCAAACTACGTCCCTTTATCTCCTTT
AACATTCTTGAAGAGAGCCGCCGCGGTTTATGGCAATCGTACCTCTATTA
TTTACGAAGGCACCCGTTTCAATTGGCTTCAAACTTACGACCGTTGTCGC
CGCCTTGCCTCTTCCCTCCGCTCTTTGAACATGCCCAAACACGGCGTTGT
AAGTTATTTCTAA

protein sequence of evm.model.HIC_ASM_8.597-csg_v1

>evm.model.HIC_ASM_8.597-csg_v1 ID=evm.model.HIC_ASM_8.597-csg_v1; Name=evm.model.HIC_ASM_8.597-csg_v1; organism=Citrus sinensis; type=polypeptide; length=71bp
MDKLSKCEANYVPLSPLTFLKRAAAVYGNRTSIIYEGTRFNWLQTYDRCR
RLASSLRSLNMPKHGVVSYF*

mRNA from alignment at HIC_ASM_8:4050098..4050310+

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

> ID=; Name=; organism= ; type=; length=213bp; location=Sequence derived from: HIC_ASM_8:4050098..4050310+ (Citrus sinensis
ATGGATAAGCTTTCAAAGTGTGAAGCAAACTACGTCCCTTTATCTCCTTT
AACATTCTTGAAGAGAGCCGCCGCGGTTTATGGCAATCGTACCTCTATTA
TTTACGAAGGCACCCGTTTCAATTGGCTTCAAACTTACGACCGTTGTCGC
CGCCTTGCCTCTTCCCTCCGCTCTTTGAACATGCCCAAACACGGCGTTGT
AAGTTATTTCTAA

Coding sequence (CDS) from alignment at HIC_ASM_8:4050098..4050310+

>evm.model.HIC_ASM_8.597-csg_v1 ID=evm.model.HIC_ASM_8.597-csg_v1; Name=EVM_prediction_HIC_ASM_8.597; organism=Citrus sinensis; type=CDS; length=213bp; location=Sequence derived from: HIC_ASM_8:4050098..4050310+ (Citrus sinensis
ATGGATAAGCTTTCAAAGTGTGAAGCAAACTACGTCCCTTTATCTCCTTT
AACATTCTTGAAGAGAGCCGCCGCGGTTTATGGCAATCGTACCTCTATTA
TTTACGAAGGCACCCGTTTCAATTGGCTTCAAACTTACGACCGTTGTCGC
CGCCTTGCCTCTTCCCTCCGCTCTTTGAACATGCCCAAACACGGCGTTGT
AAGTTATTTCTAA