EVM_prediction_HIC_ASM_8.795
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of EVM_prediction_HIC_ASM_8.795 vs. ExPASy TrEMBL
Match: A0A2H5MY81|A0A2H5MY81_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_004910 PE=4 SV=1) HSP 1 Score: 427.943 bits (1099), Expect = 2.041e-151 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0 Query: 1 MIGLTKLGTILTVVFVVSVLALVAELLYVLWRRQSFWRRSDQLYPKPSKEQLLYFFCWKNQSRIEPAGNTHAPASEDAEARVSAVDDDDVSKWQWAVYGPSRVLFTIKEEEREGTETTSEAENETVKSKSKTVSFDQAESVSDQVAVLVSVEEAVDEATPFSTPCASPPYYTPSPSPTHDKYSPGNGETELILRGENDLSFVNLEVKNV 209 MIGLTKLGTILTVVFVVSVLALVAELLYVLWRRQSFWRRSDQLYPKPSKEQLLYFFCWKNQSRIEPAGNTHAPASEDAEARVSAVDDDDVSKWQWAVYGPSRVLFTIKEEEREGTETTSEAENETVKSKSKTVSFDQAESVSDQVAVLVSVEEAVDEATPFSTPCASPPYYTPSPSPTHDKYSPGNGETELILRGENDLSFVNLEVKNV Sbjct: 1 MIGLTKLGTILTVVFVVSVLALVAELLYVLWRRQSFWRRSDQLYPKPSKEQLLYFFCWKNQSRIEPAGNTHAPASEDAEARVSAVDDDDVSKWQWAVYGPSRVLFTIKEEEREGTETTSEAENETVKSKSKTVSFDQAESVSDQVAVLVSVEEAVDEATPFSTPCASPPYYTPSPSPTHDKYSPGNGETELILRGENDLSFVNLEVKNV 209
BLAST of EVM_prediction_HIC_ASM_8.795 vs. ExPASy TrEMBL
Match: A0A067FT90|A0A067FT90_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g028440mg PE=4 SV=1) HSP 1 Score: 427.943 bits (1099), Expect = 2.041e-151 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0 Query: 1 MIGLTKLGTILTVVFVVSVLALVAELLYVLWRRQSFWRRSDQLYPKPSKEQLLYFFCWKNQSRIEPAGNTHAPASEDAEARVSAVDDDDVSKWQWAVYGPSRVLFTIKEEEREGTETTSEAENETVKSKSKTVSFDQAESVSDQVAVLVSVEEAVDEATPFSTPCASPPYYTPSPSPTHDKYSPGNGETELILRGENDLSFVNLEVKNV 209 MIGLTKLGTILTVVFVVSVLALVAELLYVLWRRQSFWRRSDQLYPKPSKEQLLYFFCWKNQSRIEPAGNTHAPASEDAEARVSAVDDDDVSKWQWAVYGPSRVLFTIKEEEREGTETTSEAENETVKSKSKTVSFDQAESVSDQVAVLVSVEEAVDEATPFSTPCASPPYYTPSPSPTHDKYSPGNGETELILRGENDLSFVNLEVKNV Sbjct: 1 MIGLTKLGTILTVVFVVSVLALVAELLYVLWRRQSFWRRSDQLYPKPSKEQLLYFFCWKNQSRIEPAGNTHAPASEDAEARVSAVDDDDVSKWQWAVYGPSRVLFTIKEEEREGTETTSEAENETVKSKSKTVSFDQAESVSDQVAVLVSVEEAVDEATPFSTPCASPPYYTPSPSPTHDKYSPGNGETELILRGENDLSFVNLEVKNV 209
BLAST of EVM_prediction_HIC_ASM_8.795 vs. ExPASy TrEMBL
Match: V4SRI6|V4SRI6_CITCL (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10012763mg PE=4 SV=1) HSP 1 Score: 421.009 bits (1081), Expect = 1.160e-148 Identity = 206/209 (98.56%), Postives = 206/209 (98.56%), Query Frame = 0 Query: 1 MIGLTKLGTILTVVFVVSVLALVAELLYVLWRRQSFWRRSDQLYPKPSKEQLLYFFCWKNQSRIEPAGNTHAPASEDAEARVSAVDDDDVSKWQWAVYGPSRVLFTIKEEEREGTETTSEAENETVKSKSKTVSFDQAESVSDQVAVLVSVEEAVDEATPFSTPCASPPYYTPSPSPTHDKYSPGNGETELILRGENDLSFVNLEVKNV 209 MIGLTKLGTILTVVFVVSVLALVAELLYVLWRRQSFWRRSDQLYP PSKEQLLYFFCWKNQSRIEPAGNTHAPASEDAEAR SAVDDDDVSKWQWAVYGPSRVLFTIKEEEREGTETTSEAENETVKSKSKTVSFDQAESVSDQVAVLVSVEEAVDEATPFSTPCASPPYYTPSPSPTHDKYSPGNGETELILRGENDLSFVN EVKNV Sbjct: 1 MIGLTKLGTILTVVFVVSVLALVAELLYVLWRRQSFWRRSDQLYPTPSKEQLLYFFCWKNQSRIEPAGNTHAPASEDAEARASAVDDDDVSKWQWAVYGPSRVLFTIKEEEREGTETTSEAENETVKSKSKTVSFDQAESVSDQVAVLVSVEEAVDEATPFSTPCASPPYYTPSPSPTHDKYSPGNGETELILRGENDLSFVNPEVKNV 209
BLAST of EVM_prediction_HIC_ASM_8.795 vs. ExPASy TrEMBL
Match: A0A1Q3ANJ8|A0A1Q3ANJ8_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_00865 PE=4 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 4.270e-46 Identity = 104/222 (46.85%), Postives = 132/222 (59.46%), Query Frame = 0 Query: 1 MIGLTKLGTILTVVFVVSVLALVAELLYVLWRRQSFWRRS----DQLYP-----KPSKEQLLYFFCWKNQSRIEPAGNTHAPASEDAEARVSAVDDDDVSKWQWAVYGPSRVLFTIKEE--EREGTET----TSEAENETVKSKSKTVSFDQAESVSDQVAVLVSVEEAVDEATPFSTPCASPPYYTPSPSPTH-DKYSPGNGETELILRGENDLSFVNLEV 206 M GL+K+ T LTVVF VS++ LV +L+YVLWRR+ FW R D +P PSKE LLYFFCWKNQ RIE A + V +DD+++KWQ YGPSRVLFTI+EE EREG E+ TS EN T + + + + V Q + V V+ VD+ATPFSTPC SP YYTPSPSP+ D N R EN+ SFV++++ Sbjct: 1 MSGLSKVATALTVVFAVSLVILVCDLIYVLWRRRGFWERGMAGEDSEFPGNSFHAPSKE-LLYFFCWKNQCRIE---PAAAAVAPHPPIPVEEEEDDELAKWQ--AYGPSRVLFTIREEADEREGLESESCCTSFDENGTRAKRVRLNDCFEDKVVLPQSSSQVVVDIEVDQATPFSTPCGSPQYYTPSPSPSRFDDTDSENSVENDEGRCENERSFVSIQI 216
BLAST of EVM_prediction_HIC_ASM_8.795 vs. ExPASy TrEMBL
Match: A0A5C7HN57|A0A5C7HN57_9ROSI (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_015984 PE=4 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 8.150e-46 Identity = 122/225 (54.22%), Postives = 147/225 (65.33%), Query Frame = 0 Query: 1 MIGLTKLGTILTVVFVVSVLALVAELLYVLWRRQSFWRRSDQ------LYPKPSKEQLLYFFCWKNQSRIEPAGNTHAPASEDAEARVSAVDDDDVSKWQWAVYGPSRVLFTIKEEEREGTETTSEAENETVKSKSKTVSFDQAESVSDQVAVLVSVEEAV-------------DEATPFSTPCASPPYYTPSPSPTHDKYSPGNGETELILRGENDLSFVNLEV 206 M GLTKLGT+LTVVF VS+LALV EL+YVLWR + F RRSD Y PSKEQLLYFFCWKN SR+EP+G P + VDDD+++KWQ +YGPSR LFTIKEEEREGTET +E E +K+ D+AE+ S+ + EAV +E TPFSTPCASPPYYTPSPSPT DKYSPGN E ++ ++SFV+L+V Sbjct: 1 MNGLTKLGTVLTVVFSVSILALVFELIYVLWRNRVFRRRSDPESPSDPFYITPSKEQLLYFFCWKNPSRVEPSG---TPGVSEPPGGAEVVDDDELAKWQQGMYGPSRFLFTIKEEEREGTETETENEATRIKTVRVD---DEAEADSESC-----LSEAVGVNTVIVRVVVDQEETTPFSTPCASPPYYTPSPSPTRDKYSPGNCENDV------NVSFVSLQV 208
BLAST of EVM_prediction_HIC_ASM_8.795 vs. ExPASy TrEMBL
Match: A0A438E9M1|A0A438E9M1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_113972 PE=4 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 6.850e-44 Identity = 98/199 (49.25%), Postives = 128/199 (64.32%), Query Frame = 0 Query: 1 MIGLTKLGTILTVVFVVSVLALVAELLYVLWRRQSFWRR-SDQLYPK--------PSKEQLLYFFCWKNQSRIEPAGNTHA-PASEDAEARVSAVDDDDVSKWQWAVYGPSRVLFTIKEEEREGTETTSEAENETVKSKSKTVSFDQAESVSDQVAVLVSVEEAVDEATPFSTPCASPPYYTPSPSPTHDKYSPGNGET 189 MIGL+KL +L VVF V +L + +L +V W R+ F R+ S +P+ PSKE LLYFFCWK QSRIEP + HA PA+ ++D DV KWQ +YG SRVLFTIKEEER E +A ++++ +++K+VS + V+D++ L +V VDE TPFSTPCASPPY+TPSPSPT D GNG T Sbjct: 1 MIGLSKLCIVLIVVFAVFLLVIGTQLFHVYWYRKRFRRQNSTAGHPEFPGDPFSIPSKE-LLYFFCWKRQSRIEPHADPHAHPATRPGRVPSEEINDVDVLKWQ-GLYGSSRVLFTIKEEER--EEMEPQATDKSLSAETKSVSLGECLRVADELPEL-TVAVGVDEVTPFSTPCASPPYFTPSPSPTRDV---GNGTT 191
BLAST of EVM_prediction_HIC_ASM_8.795 vs. ExPASy TrEMBL
Match: D7TH64|D7TH64_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0007g02370 PE=4 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 6.850e-44 Identity = 98/199 (49.25%), Postives = 128/199 (64.32%), Query Frame = 0 Query: 1 MIGLTKLGTILTVVFVVSVLALVAELLYVLWRRQSFWRR-SDQLYPK--------PSKEQLLYFFCWKNQSRIEPAGNTHA-PASEDAEARVSAVDDDDVSKWQWAVYGPSRVLFTIKEEEREGTETTSEAENETVKSKSKTVSFDQAESVSDQVAVLVSVEEAVDEATPFSTPCASPPYYTPSPSPTHDKYSPGNGET 189 MIGL+KL +L VVF V +L + +L +V W R+ F R+ S +P+ PSKE LLYFFCWK QSRIEP + HA PA+ ++D DV KWQ +YG SRVLFTIKEEER E +A ++++ +++K+VS + V+D++ L +V VDE TPFSTPCASPPY+TPSPSPT D GNG T Sbjct: 1 MIGLSKLCIVLIVVFAVFLLVIGTQLFHVYWYRKRFRRQNSTAGHPEFPGDPFSIPSKE-LLYFFCWKRQSRIEPHADPHAHPATRPGRVPSEEINDVDVLKWQ-GLYGSSRVLFTIKEEER--EEMEPQATDKSLSAETKSVSLGECLRVADELPEL-TVAVGVDEVTPFSTPCASPPYFTPSPSPTRDV---GNGTT 191
BLAST of EVM_prediction_HIC_ASM_8.795 vs. ExPASy TrEMBL
Match: A0A061EVJ3|A0A061EVJ3_THECC (Membrane lipoprotein OS=Theobroma cacao OX=3641 GN=TCM_022876 PE=4 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.109e-43 Identity = 96/202 (47.52%), Postives = 121/202 (59.90%), Query Frame = 0 Query: 1 MIGLTKLGTILTVVFVVSVLALVAELLYVLWRRQSFWRRS---------------DQLYPKPSKEQLLYFFCWKNQ-SRIEPAGN------THAPASEDAEARVSAVDDDDVSKWQWAVYGPSRVLFTIKEEEREGTETTSEAENETVKSKSKTVSFDQAESVSDQVAVLVSVEEAVDEATPFSTPCASPPYYTPSPSPTHD 180 M TKL L VVF +LAL+ EL+YVLWR++ F +RS Y PSKE LLYFFCWKNQ +R+EP+ T AP + D+EA DDD+++KWQ A YGP R+L+TIKEEEREG ++ + ++T K V S +VA V+V V+EATPFSTPCASPPY+TPSPSP D Sbjct: 1 MNASTKLEIALIVVFATCLLALIIELVYVLWRKRRFRQRSIVSGGNGSVDSAFSNSPFYAAPSKE-LLYFFCWKNQPARVEPSSGVVSPSPTEAPTASDSEAATVEADDDELAKWQ-ASYGPVRILYTIKEEEREGADSVENSADQTEVKSEKRVCLRDRFSGPVEVADDVAVVVDVEEATPFSTPCASPPYFTPSPSPGRD 200
BLAST of EVM_prediction_HIC_ASM_8.795 vs. ExPASy TrEMBL
Match: A0A6J1ARY2|A0A6J1ARY2_9ROSI (Uncharacterized protein LOC110420602 OS=Herrania umbratica OX=108875 GN=LOC110420602 PE=4 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.467e-41 Identity = 104/240 (43.33%), Postives = 141/240 (58.75%), Query Frame = 0 Query: 1 MIGLTKLGTILTVVFVVSVLALVAELLYVLWRRQSFWRRS---------------DQLYPKPSKEQLLYFFCWKNQ-SRIEPAGN------THAPASEDAEARVSAVDDDDVSKWQWAVYGPSRVLFTIKEEEREGTETTSEAENET-VKSKSKTVSFDQAESVSDQVAVLVSVEEAVDEATPFSTPCASPPYYTPSPSPTHDK----YSPGNGET-----ELILRGENDLSFVNLEVKN 208 M TKL T L V+F +LA + EL+YVLWR++ F +RS Y SKE LLYFFCWKNQ +R+EP+ T AP + D+EA DDD+++KWQ A YGP R+L+TIKEEEREG ++ + ++T VKS ++ D+ S +VA V+V V+EATPFSTPCASPPY+TPSPSP D SP N + +++ GE + FV+L ++ Sbjct: 1 MNASTKLETALVVIFATCLLAFIIELVYVLWRKRRFRQRSIVSGGNGSVDSEFSNSPFYAASSKE-LLYFFCWKNQPARVEPSSGVVSPAPTEAPTASDSEAATVEADDDELAKWQ-AAYGPVRILYTIKEEEREGADSVENSADQTEVKSDNRVCLRDRF-SGPVEVADDVAVVVDVEEATPFSTPCASPPYFTPSPSPGRDVEISILSPENDDVISPDGDVLTDGE--VGFVSLRIEG 235
BLAST of EVM_prediction_HIC_ASM_8.795 vs. ExPASy TrEMBL
Match: A0A8J4W3F5|A0A8J4W3F5_9ROSI (Uncharacterized protein OS=Castanea mollissima OX=60419 GN=CMV_002777 PE=4 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.066e-41 Identity = 96/202 (47.52%), Postives = 118/202 (58.42%), Query Frame = 0 Query: 1 MIGLTKLGTILTVVFVVSVLALVAELLYVLWRRQSFWRR--SDQLYPKPSKEQLLYFFCWKNQSRIEPAGNTHAPASEDAEARVSAVDD----DDVSKWQWAVYGPSRVLFTIKEEEREG--TETTSEAENETVKSKSKTVSFDQAESVSDQVAVLVSVEEAVDE--ATPFSTPCASPPYYTPSPSPTHDKYSPGNGETELI 192 M L KLG LTVVF V ++AL+AEL VL RR+ F R+ + + PS ++LLYFFCWKNQSRIEP G P + D+ DDV KWQ +YG SRVLFTIKEE+REG +E S +E K K D + S Q AV++ E VDE TPFSTPCASPPYYTP SP GE++++ Sbjct: 1 MGALNKLGLALTVVFAVILVALLAELFCVLHRRKRFRRQNFAGNSFYSPSTKELLYFFCWKNQSRIEPQGTPPPPPPLPNFSPPPQSDETTEADDVLKWQ-GLYGSSRVLFTIKEEDREGVDSENCSSSEKAVSTKKEKRAGVD---TTSFQAAVMI---EVVDEEATTPFSTPCASPPYYTPLA-------SPARGESDMV 188
BLAST of EVM_prediction_HIC_ASM_8.795 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:19452478-19453107 REVERSE LENGTH=209) HSP 1 Score: 91.6633 bits (226), Expect = 9.854e-23 Identity = 78/212 (36.79%), Postives = 105/212 (49.53%), Query Frame = 0 Query: 2 IGLTKLGTILTVVFVVSVLALVAELLYVLWRRQSFWRRS------DQL---------YPKPSKEQLLYF-FCWKN-QSRIEPAGNTHAPASEDAEARVSAVDDDDVSKW----QWAVYGPSRVLFTIKEEEREGTETTSEAENETVKSKSKTVSFDQAESVSDQV-----AVLVSVEEA----VDEATPFSTPCASPPYYTPSPSPTHDKYS 183 +GLT T+L VF ++A+ A+ YVLW ++ F RRS D P PSKE L +F FC +N Q RI G+ AP A V +D SKW + + GPS LFTI E+ TSE+++ T + + F + D+V A +S +E ++ TPFSTPCASPP+YTPSPSP D S Sbjct: 1 MGLTPTATLLVAVFAFCLVAVTAQFAYVLWWKRRFRRRSIAGSERDAFSSRGGDLTATPPPSKELLYFFLFCLENKQFRI---GSATAPPLPAAAPPV----NDVASKWSINGENLLCGPSETLFTIAED------YTSESDHRTGEIDPRGSIFTEDHVKDDEVEEEVVATDISDDEVDFSHYNQTTPFSTPCASPPFYTPSPSPIRDDLS 199
BLAST of EVM_prediction_HIC_ASM_8.795 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:3674501-3675061 FORWARD LENGTH=186) HSP 1 Score: 53.5286 bits (127), Expect = 1.056e-8 Identity = 50/150 (33.33%), Postives = 75/150 (50.00%), Query Frame = 0 Query: 36 FWRRSDQLYPKPSKEQLLYFF---CWKNQ--SRIEPAGNTHAPASEDAEARVSAVDDDDVSKWQWAVYGPSRVLFTIKEEEREGTETTSEAENETVKSKSKTVSFDQAESVSDQVAVLVSVEEAVDEATPFSTPCASPPYYTPSPSPTHD 180 F R+ L P P+ +++L+ F C KN SRIEP + E+ + +++ + +W V SR+LFTI+EE+ E + + + V + +V V + VE + D TPF TPC SPPY+TPSPSP D Sbjct: 30 FCCRTGSL-PSPASKEVLFQFLMCCKKNHHHSRIEPCTGIVSVQMEEDVVAAAVPEEEFAAADKWRV---SRLLFTIEEEDLELEDDDDDVISAEVDNGF-------------EVQVDIPVEYSGD-PTPFLTPCNSPPYFTPSPSPGRD 161 The following BLAST results are available for this feature:
BLAST of EVM_prediction_HIC_ASM_8.795 vs. ExPASy TrEMBL
Analysis Date: 2024-01-25 (Blastp of Citrus sinensis cv. Gannanzao v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of EVM_prediction_HIC_ASM_8.795 vs. ExPASy TrEMBL
Analysis Date: 2023-08-23 (Blastp of Citrus sinensis cv. Newhall v1.0 proteins vs UniProt Swissprot) Total hits: 0 Position : 0 Zoom : x 1
BLAST of EVM_prediction_HIC_ASM_8.795 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Citrus sinensis cv. Gannanzao v1.0 proteins vs Araport11) Total hits: 2 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus sinensis cv. Gannanzao v1.0 proteins
Date Performed: 2024-01-25 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >evm.model.HIC_ASM_8.795-csg_v1 ID=evm.model.HIC_ASM_8.795-csg_v1; Name=EVM_prediction_HIC_ASM_8.795; organism=Citrus sinensis; type=mRNA; length=630bpback to top protein sequence of evm.model.HIC_ASM_8.795-csg_v1 >evm.model.HIC_ASM_8.795-csg_v1 ID=evm.model.HIC_ASM_8.795-csg_v1; Name=evm.model.HIC_ASM_8.795-csg_v1; organism=Citrus sinensis; type=polypeptide; length=210bpback to top mRNA from alignment at HIC_ASM_8:5628496..5629337+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=842bp; location=Sequence derived from: HIC_ASM_8:5628496..5629337+ (Citrus sinensisback to top Coding sequence (CDS) from alignment at HIC_ASM_8:5628496..5629337+ >evm.model.HIC_ASM_8.795-csg_v1 ID=evm.model.HIC_ASM_8.795-csg_v1; Name=EVM_prediction_HIC_ASM_8.795; organism=Citrus sinensis; type=CDS; length=630bp; location=Sequence derived from: HIC_ASM_8:5628496..5629337+ (Citrus sinensisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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