EVM_prediction_HIC_ASM_8.517
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of EVM_prediction_HIC_ASM_8.517 vs. ExPASy TrEMBL
Match: V4T2L9|V4T2L9_CITCL (HTH myb-type domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10012203mg PE=4 SV=1) HSP 1 Score: 657.522 bits (1695), Expect = 0.000e+0 Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0 Query: 1 MREDDSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDIRNPVNGNGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLPYVPVAALHQQQMAVAAAVGNPHLQGHQYHRQMSHFGSPANGQFEHHLFARQAQPQQVHRMGAPVHSTVPSSYVEDLESANGGRKVLTLFPTGDD 322 MREDDSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDIRNPVNGNGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLPYVPVAALHQQQMAVAAAVGNPHLQGHQYHRQMSHFGSPANGQFEHHLFARQAQPQQVHRMGAPVHSTVPSSYVEDLESANGGRKVLTLFPTGDD Sbjct: 1 MREDDSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDIRNPVNGNGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLPYVPVAALHQQQMAVAAAVGNPHLQGHQYHRQMSHFGSPANGQFEHHLFARQAQPQQVHRMGAPVHSTVPSSYVEDLESANGGRKVLTLFPTGDD 322
BLAST of EVM_prediction_HIC_ASM_8.517 vs. ExPASy TrEMBL
Match: A0A067ER43|A0A067ER43_CITSI (HTH myb-type domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g020690mg PE=4 SV=1) HSP 1 Score: 657.522 bits (1695), Expect = 0.000e+0 Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0 Query: 1 MREDDSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDIRNPVNGNGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLPYVPVAALHQQQMAVAAAVGNPHLQGHQYHRQMSHFGSPANGQFEHHLFARQAQPQQVHRMGAPVHSTVPSSYVEDLESANGGRKVLTLFPTGDD 322 MREDDSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDIRNPVNGNGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLPYVPVAALHQQQMAVAAAVGNPHLQGHQYHRQMSHFGSPANGQFEHHLFARQAQPQQVHRMGAPVHSTVPSSYVEDLESANGGRKVLTLFPTGDD Sbjct: 1 MREDDSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDIRNPVNGNGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLPYVPVAALHQQQMAVAAAVGNPHLQGHQYHRQMSHFGSPANGQFEHHLFARQAQPQQVHRMGAPVHSTVPSSYVEDLESANGGRKVLTLFPTGDD 322
BLAST of EVM_prediction_HIC_ASM_8.517 vs. ExPASy TrEMBL
Match: A0A2H5NUK0|A0A2H5NUK0_CITUN (HTH myb-type domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_076220 PE=4 SV=1) HSP 1 Score: 653.284 bits (1684), Expect = 0.000e+0 Identity = 320/322 (99.38%), Postives = 321/322 (99.69%), Query Frame = 0 Query: 1 MREDDSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDIRNPVNGNGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLPYVPVAALHQQQMAVAAAVGNPHLQGHQYHRQMSHFGSPANGQFEHHLFARQAQPQQVHRMGAPVHSTVPSSYVEDLESANGGRKVLTLFPTGDD 322 MREDDSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDIRNPVNGNGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGG+GAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLPYVPVAALHQQQMAVA AVGNPHLQGHQYHRQMSHFGSPANGQFEHHLFARQAQPQQVHRMGAPVHSTVPSSYVEDLESANGGRKVLTLFPTGDD Sbjct: 1 MREDDSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDIRNPVNGNGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGAGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLPYVPVAALHQQQMAVAPAVGNPHLQGHQYHRQMSHFGSPANGQFEHHLFARQAQPQQVHRMGAPVHSTVPSSYVEDLESANGGRKVLTLFPTGDD 322
BLAST of EVM_prediction_HIC_ASM_8.517 vs. ExPASy TrEMBL
Match: A0A9E9KUX6|A0A9E9KUX6_LITCN (MYB transcription factor 6 OS=Litchi chinensis OX=151069 GN=MYB6 PE=2 SV=1) HSP 1 Score: 384.8 bits (987), Expect = 6.251e-131 Identity = 223/328 (67.99%), Postives = 243/328 (74.09%), Query Frame = 0 Query: 1 MREDDSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDIRNPVNGNGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQ--GLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLPYVPVAALHQQQMAVAAAVGNPHLQGHQYHRQMSHFGSPANGQFEHHLFARQAQPQQVHRMGAPVHSTVPSSYVEDLESAN----GGRKVLTLFPTGDD 322 MRE++SNWFARWEE+LPS EEL+PLSQTLI+ DLA+AFDIRN N N + P ++F ENSAE+GSG AG DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQ G GGVNG G GA DPATDHLFASSPVPAHFLHPG R NS+HFLP+VP+AA+HQQQMAVAA +PHLQ QY RQM HFGSP NGQFEH ARQ Q QQVHR+GAP+H++VP YVEDLESAN GGR+VLTLFPTGDD Sbjct: 1 MREEESNWFARWEEELPSQEELMPLSQTLITRDLALAFDIRN---SNPNHHQQ----------------QQVPPPPPPPPAMPPSSAEFGGENSAELGSG-AGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGAAAAAGGGGVNGSGGGAVSGGGDPATDHLFASSPVPAHFLHPG-RSNSEHFLPFVPMAAIHQQQMAVAAVGNHPHLQS-QYQRQMGHFGSPPNGQFEHTFLARQQQ-QQVHRIGAPLHNSVP--YVEDLESANGGGGGGRRVLTLFPTGDD 303
BLAST of EVM_prediction_HIC_ASM_8.517 vs. ExPASy TrEMBL
Match: A0A5C7IM14|A0A5C7IM14_9ROSI (HTH myb-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_005135 PE=4 SV=1) HSP 1 Score: 383.645 bits (984), Expect = 1.794e-130 Identity = 236/323 (73.07%), Postives = 253/323 (78.33%), Query Frame = 0 Query: 1 MREDDSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDIRNPVNGNGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLPYVPVAALHQQQM-AVAAAVGNPHLQGHQYHRQMSHFGSPANGQFEHHLFARQAQPQQVHRMGAPVHSTVPSSYVEDLESANGGRKVLTLFPTGDD 322 MRE++SNWFARWEE+LPS EEL+PLSQTLI+PDLA+AFDIRN Q PL P++ ++FAAENSAE+GSG AG DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGG G G S A+ ADPATDHLFASSPVP HFLHPG R NSDHFLP+VPVAALHQQQM AAAVGNPHLQ QYHRQ+ HFGSP NGQFEH RQAQ QQV RMGAPVH+++P YVEDLESANG RKVLTLFPTGDD Sbjct: 1 MREEESNWFARWEEELPSPEELMPLSQTLITPDLAIAFDIRNSNPNLQQQQQQQQHQPPPPPPPPPLAPSS---------------AEFAAENSAELGSG-AGSDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGGAGGVNGSSAAS---ADPATDHLFASSPVPPHFLHPG-RSNSDHFLPFVPVAALHQQQMAVAAAAVGNPHLQN-QYHRQIGHFGSPPNGQFEHPFLPRQAQ-QQVQRMGAPVHNSIP-GYVEDLESANGNRKVLTLFPTGDD 300
BLAST of EVM_prediction_HIC_ASM_8.517 vs. ExPASy TrEMBL
Match: A0A1Q3AMU9|A0A1Q3AMU9_CEPFO (Myb_DNA-binding domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_00596 PE=4 SV=1) HSP 1 Score: 370.933 bits (951), Expect = 1.856e-125 Identity = 225/329 (68.39%), Postives = 247/329 (75.08%), Query Frame = 0 Query: 1 MREDDSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDIRNPVNGNGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLPYVPVAAL-----HQQQMAVAAAVGNPHLQGHQYHRQMSHFGSPANGQFEHHLFARQAQPQQVHRMGAPVHSTVPSSYVEDLES--ANGGRKVLTLFPTGDD 322 MRED+SNWF+RWEEDLPS EEL+PLSQTLI+PDLA+AFDIR+P N N QHQ + P + NS S+FAA+ SAE+GSG AG DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQ G G GG G +G A ++DPATDHLFASSPVPAHFLHPG R NSDHFLP+VPV L QQ A AAAV +P LQ QYHRQ+ HFGSP NG FEH +RQ Q Q +HRMGAP+H+ VP +YVEDLES ANGGRKVLTLFPTGDD Sbjct: 1 MREDESNWFSRWEEDLPSPEELMPLSQTLITPDLALAFDIRSPNNTTNN-------QHQTPPRPPSAAPPPSQPNS----------SEFAAD-SAELGSGAAG-DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQ-----GLSGGGGGGGNSAGGAAASSDPATDHLFASSPVPAHFLHPG-RPNSDHFLPFVPVTTLQQHHHQQQMAAAAAAVAHPQLQT-QYHRQLGHFGSPTNGGFEHPFLSRQTQQQPLHRMGAPLHNVVP-NYVEDLESVNANGGRKVLTLFPTGDD 302
BLAST of EVM_prediction_HIC_ASM_8.517 vs. ExPASy TrEMBL
Match: A0A7J7DVI6|A0A7J7DVI6_TRIWF (Transcription factor PCL1-like OS=Tripterygium wilfordii OX=458696 GN=HS088_TW03G00643 PE=4 SV=1) HSP 1 Score: 367.851 bits (943), Expect = 4.479e-124 Identity = 233/326 (71.47%), Postives = 249/326 (76.38%), Query Frame = 0 Query: 1 MREDDSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDIRNPVNGNGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLPYVPV--AALHQQQMAVAAAVGNPHLQGHQYHRQMSHFGSPANGQFEHHLFARQAQPQQVHRMGAPVHSTVPSSYVEDLES--ANGGRKVLTLFPTGDD 322 MREDD+NWF+RWEE+LPS EEL+PLSQTLI+PDLA+AFDIRNP N N S HQQ Q P P + S + N +FAA+ SAE+GSG GDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS GGG G GGG A +ADPATDHLFASSPVP HFLHPG R NSDHFLP+VPV H Q +AAAV +P LQ QYHRQM HFGSP NGQFEH ARQ Q Q VHRMGAPVHS VP YVEDLES ANGGRKVLTLFPTG+D Sbjct: 1 MREDDANWFSRWEEELPSPEELMPLSQTLITPDLALAFDIRNPSNTN--------SHHQQQSQPLPPPPQSGGLQSTPSQPN---SGEFAAD-SAELGSGTGAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS-TGGGAGGNNLGGGGAAGLASADPATDHLFASSPVPPHFLHPG-RPNSDHFLPFVPVAALQHHHHQQHMAAAVAHPQLQA-QYHRQMGHFGSPPNGQFEHPFLARQTQQQSVHRMGAPVHSQVP-GYVEDLESANANGGRKVLTLFPTGED 310
BLAST of EVM_prediction_HIC_ASM_8.517 vs. ExPASy TrEMBL
Match: A0A7J9DIG0|A0A7J9DIG0_9ROSI (HTH myb-type domain-containing protein OS=Gossypium trilobum OX=34281 GN=Gotri_023223 PE=4 SV=1) HSP 1 Score: 367.851 bits (943), Expect = 5.094e-124 Identity = 218/334 (65.27%), Postives = 245/334 (73.35%), Query Frame = 0 Query: 1 MREDDSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDIRNPVNGNGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLPYVPVAALHQQQMA--------VAAAVGNPHLQGHQYHR-QMSHFGSPANGQFEHHLFARQAQPQQVHRM-GAPVHSTVPSSYVEDLESA--NGGRKVLTLFPTGDD 322 MRE+DSNWF+RWEE+LPS +EL+PLSQ+LI+PDLA+AFDIRNP + H QQQ + P ++ ++ ++FAA +S ++GSG AG DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQ GG G G G G G +ADPATDHLFASSPVP HFLHPG RGNS+HFLP+VPV AL Q VAAAVG+PHLQ QYHR QM HFGS N QFEH RQ Q Q +HR+ G P+H+ PSSYVEDLESA NGGRKVLTLFPTGDD Sbjct: 1 MREEDSNWFSRWEEELPSPDELMPLSQSLITPDLAMAFDIRNP------------NHHHAQQQQSSVQPAPPLPSAAVQPSSQPTLAEFAA-DSGDLGSGAAG-DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQ--GLSGGSGGGANGGSGGAGLGASADPATDHLFASSPVPPHFLHPG-RGNSEHFLPFVPVPALQHHQHHHHHQQQQIVAAAVGHPHLQS-QYHRPQMGHFGSSPNSQFEHPFLGRQTQ-QPMHRIGGTPMHNQAPSSYVEDLESANGNGGRKVLTLFPTGDD 315
BLAST of EVM_prediction_HIC_ASM_8.517 vs. ExPASy TrEMBL
Match: A0A6P5Z2R6|A0A6P5Z2R6_DURZI (Transcription factor MYBC1-like OS=Durio zibethinus OX=66656 GN=LOC111296730 PE=4 SV=1) HSP 1 Score: 367.466 bits (942), Expect = 7.170e-124 Identity = 227/330 (68.79%), Postives = 250/330 (75.76%), Query Frame = 0 Query: 1 MREDDSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDIRNPVNGNGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLPYVPVAALHQQQMA-----VAAAVGNPHLQGHQYHRQMSHFGSPANGQFEHHLFARQAQPQQVHRM-GAPVHSTVPSSYVEDLESA--NGGRKVLTLFPTGDD 322 MRE+DSNWF++WEE LPS EEL+PLSQTLI+PDLA+AFDIRNP N + QQ QQQQ L P ++S + ++FAA+ S ++GSG AG DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQG GGGGG G G G G ADPATDHLFASSPVP HFLHP ARGNS+HFLP+VPV A+ VAAAVG+PHLQ QYHRQM HFGS NGQFEH RQ Q Q +HRM GAPVH+ V S+Y+EDLESA NGGRKVLTLFPTGDD Sbjct: 1 MREEDSNWFSKWEEQLPSPEELMPLSQTLITPDLALAFDIRNP-------NHHHHHHQQQQQQQQQLPPPPPLHSSAVQPPSQPISAEFAAD-SGDLGSGAAG-DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQG-LSGGGGGGGANGGAGVAGLGGTADPATDHLFASSPVPPHFLHP-ARGNSEHFLPFVPVPAVQHHHHHQQQQMVAAAVGHPHLQT-QYHRQMGHFGSSPNGQFEHPFLGRQTQ-QPMHRMGGAPVHNQVTSNYLEDLESANGNGGRKVLTLFPTGDD 317
BLAST of EVM_prediction_HIC_ASM_8.517 vs. ExPASy TrEMBL
Match: A0A5J5X0P9|A0A5J5X0P9_GOSBA (HTH myb-type domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_A01G209700v1 PE=4 SV=1) HSP 1 Score: 364.77 bits (935), Expect = 5.921e-123 Identity = 215/331 (64.95%), Postives = 243/331 (73.41%), Query Frame = 0 Query: 1 MREDDSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDIRNPVNGNGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLPYVPVAALHQQQMA-----VAAAVGNPHLQGHQYHR-QMSHFGSPANGQFEHHLFARQAQPQQVHRM-GAPVHSTVPSSYVEDLESA--NGGRKVLTLFPTGDD 322 MRE+DSNWF+RWEE+LPS +EL+PLSQ+LI+PDLA+AFDIRNP + H QQQ + P ++ ++ ++FAA +S ++GSG AG DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQ GG G G G G G + DPATDHLFASSPVP HFLHPG RGNS+HFLP+VPV AL VAAAVG+PHLQ QYHR QM H+GS N QFEH RQ Q Q +HR+ G P+H+ PSSYVEDLESA NGGRKVLTLFPTGDD Sbjct: 1 MREEDSNWFSRWEEELPSPDELMPLSQSLITPDLAMAFDIRNP------------NHHHAQQQQSSVQPAPPPPSAAVQPSSQPTLAEFAA-DSGDLGSGAAG-DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQ--GLSGGSGGGANGGSGGAGLGASTDPATDHLFASSPVPPHFLHPG-RGNSEHFLPFVPVPALQHHHHHQQQQIVAAAVGHPHLQS-QYHRPQMGHYGSSPNSQFEHPFLGRQTQ-QPMHRIGGTPMHNQAPSSYVEDLESANGNGGRKVLTLFPTGDD 312
BLAST of EVM_prediction_HIC_ASM_8.517 vs. ExPASy Swiss-Prot
Match: MYBC1_ARATH (Transcription factor MYBC1 OS=Arabidopsis thaliana OX=3702 GN=MYBC1 PE=1 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 6.932e-68 Identity = 132/228 (57.89%), Postives = 155/228 (67.98%), Query Frame = 0 Query: 1 MREDDSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDIRNPVNGNGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLP 228 MRED+ NWF RWEE+LPS EELIP+SQTLI+P LA+AF I +P + G+ A+ HQ+LQ + + SDF +S ++GSG GG EPARTLKRPRLVWTPQLHKRFVDAV HLGIKNAVPKTIMQLMSV+GLTRENVASHLQKYRLYL+RMQG + G +G + +D ATD LFASSPVPAHFL P D+ +P Sbjct: 1 MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAI-YHQKLQS------STTPTTPTPTPPPMMMNSDFGGGDSTDLGSGSIGG-EPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQGGN----------GNGITGGHVIVSDSATDRLFASSPVPAHFLSP------DYLMP 204
BLAST of EVM_prediction_HIC_ASM_8.517 vs. ExPASy Swiss-Prot
Match: PCL1_ARATH (Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 5.253e-48 Identity = 121/311 (38.91%), Postives = 156/311 (50.16%), Query Frame = 0 Query: 5 DSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDI----------------------RNPVNG-NGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLPYVPVAALH--QQQMAVAAAVGNPHLQG-----------HQYHRQMSHFGSPANGQFEHHLFARQ 279 D + + WE LPS E+L LS +LI P+LA+AF I R +G N + + N + + ++ P + + SN + ++ G +A + E SG D +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKYRLYLKRMQGL+ G A+D LF+S+PVP G VP+ + QQ M + + +QG HQ HR H G+ NG FE + + Q Sbjct: 15 DGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRGGSSGPNTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDSGTE--DLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLTNEGPS-------------------ASDKLFSSTPVPPQSFQDIGGGGGSSGNVGVPIPGAYGTQQMMQMPVYAHHMGMQGYHHQNHNHDPYHQNHRH--HHGAGGNGAFESNPYMMQ 302
BLAST of EVM_prediction_HIC_ASM_8.517 vs. ExPASy Swiss-Prot
Match: PCLL_ARATH (Transcription factor BOA OS=Arabidopsis thaliana OX=3702 GN=BOA PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 6.465e-43 Identity = 96/226 (42.48%), Postives = 122/226 (53.98%), Query Frame = 0 Query: 11 RWEEDLPSYEELIPLSQTLISPDLAVAFDI-----RNPVNGNGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPL-------GQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADP--ATDHLFASSPVPAHFLHPGARGN 222 WE LP+ ++L PLSQ L+ LA+AF + R + N S + + S+ ++P G++ +++AE G G D +T KRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKYRLYLKR+QGL+ DP ++D LF+S+PVP G N Sbjct: 28 EWEIGLPNGDDLTPLSQYLVPSILALAFSMIPERSRTIHDVNRASQITLSSLRSSTNASSVMEEVVDRVESSVPGSDPKKQKKSDGGEAAAVEDSTAEEGDSGP-EDASGKTSKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLT-------------------TEEDPYSSSDQLFSSTPVPPQSFQDGGGSN 233
BLAST of EVM_prediction_HIC_ASM_8.517 vs. ExPASy Swiss-Prot
Match: PCL1_ORYSJ (Transcription factor PCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCL1 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.610e-38 Identity = 92/219 (42.01%), Postives = 111/219 (50.68%), Query Frame = 0 Query: 12 WEEDLPSYEELIPLSQTLISPDLAVAFDIRNPVNGNGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEP--------------ARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLH 216 WE LP +EL PLSQ L+ LA AF I P G + L + + + + S ++ + G G DE + KR RLVWTPQLHKRFV+ VAHLG+KNAVPKTIMQLM+V+GLTRENVASHLQKYRLY+KRMQGLS G +DH+FAS+PVP LH Sbjct: 22 WETGLPGADELTPLSQPLVPAGLAAAFRI-PPEPG------------------RTLLDVHRASAATVSRLRRASSSSSSSFPAFASKGAGTGADEAESGGGADGGNGNTNNSSSKRARLVWTPQLHKRFVEVVAHLGMKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYVKRMQGLSNEGPS-------------------PSDHIFASTPVPHASLH 202
BLAST of EVM_prediction_HIC_ASM_8.517 vs. ExPASy Swiss-Prot
Match: ARR1_ARATH (Two-component response regulator ARR1 OS=Arabidopsis thaliana OX=3702 GN=ARR1 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 2.078e-23 Identity = 52/103 (50.49%), Postives = 71/103 (68.93%), Query Frame = 0 Query: 73 NNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS 175 ++NS+S N +S E G DE A LK+PR+VW+ +LH++FV AV LG++ AVPK I++LM+V GLTRENVASHLQKYR+YL+R+ G+S Sbjct: 197 DDNSSSVNEGNNWRSSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVS 299
BLAST of EVM_prediction_HIC_ASM_8.517 vs. ExPASy Swiss-Prot
Match: ORR22_ORYSI (Two-component response regulator ORR22 OS=Oryza sativa subsp. indica OX=39946 GN=RR22 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 6.389e-23 Identity = 60/131 (45.80%), Postives = 75/131 (57.25%), Query Frame = 0 Query: 105 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLPYVPVAAL 235 DEP+ K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V+ LTRENVASHLQKYRLYLKR+ GA AA DP+ FLH GA + P+ P AAL Sbjct: 210 DEPSAA-KKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRENVASHLQKYRLYLKRL---------GAVASQQASIVAAFGGRDPS-------------FLHIGAFEGLQSYQPFAPSAAL 317
BLAST of EVM_prediction_HIC_ASM_8.517 vs. ExPASy Swiss-Prot
Match: ORR22_ORYSJ (Two-component response regulator ORR22 OS=Oryza sativa subsp. japonica OX=39947 GN=RR22 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 6.634e-23 Identity = 60/131 (45.80%), Postives = 75/131 (57.25%), Query Frame = 0 Query: 105 DEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLPYVPVAAL 235 DEP+ K+PR+VW+ +LH++FV AV LGI AVPK I++LM+V+ LTRENVASHLQKYRLYLKR+ GA AA DP+ FLH GA + P+ P AAL Sbjct: 210 DEPSAA-KKPRVVWSVELHRKFVAAVNQLGIDKAVPKRILELMNVEKLTRENVASHLQKYRLYLKRL---------GAVASQQASIVAAFGGRDPS-------------FLHIGAFEGLQSYQPFAPSAAL 317
BLAST of EVM_prediction_HIC_ASM_8.517 vs. ExPASy Swiss-Prot
Match: ORR21_ORYSI (Two-component response regulator ORR21 OS=Oryza sativa subsp. indica OX=39946 GN=RR21 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.171e-22 Identity = 54/110 (49.09%), Postives = 75/110 (68.18%), Query Frame = 0 Query: 69 PTNNNNNSNSNNNN-------PLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRM 171 PTNN+N S+ N+ + ++ E+ SG +P+ T K+PR+VW+ +LH++FV+AV HLGI AVPK I++LM+V GLTRENVASHLQK+RLYLKR+ Sbjct: 156 PTNNDNEYASSANDGAEGSWKSQKKKRDKDDDDGELESG-----DPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASHLQKFRLYLKRI 260
BLAST of EVM_prediction_HIC_ASM_8.517 vs. ExPASy Swiss-Prot
Match: ORR21_ORYSJ (Two-component response regulator ORR21 OS=Oryza sativa subsp. japonica OX=39947 GN=RR21 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.239e-22 Identity = 54/110 (49.09%), Postives = 75/110 (68.18%), Query Frame = 0 Query: 69 PTNNNNNSNSNNNN-------PLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRM 171 PTNN+N S+ N+ + ++ E+ SG +P+ T K+PR+VW+ +LH++FV+AV HLGI AVPK I++LM+V GLTRENVASHLQK+RLYLKR+ Sbjct: 156 PTNNDNEYASSANDGAEGSWKSQKKKRDKDDDDGELESG-----DPSSTSKKPRVVWSVELHQQFVNAVNHLGIDKAVPKKILELMNVPGLTRENVASHLQKFRLYLKRI 260
BLAST of EVM_prediction_HIC_ASM_8.517 vs. ExPASy Swiss-Prot
Match: ARR2_ARATH (Two-component response regulator ARR2 OS=Arabidopsis thaliana OX=3702 GN=ARR2 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 1.372e-21 Identity = 49/104 (47.12%), Postives = 70/104 (67.31%), Query Frame = 0 Query: 72 NNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS 175 +NN+S+ N N E + G E + +LK+PR+VW+ +LH++FV AV LG+ AVPK I+++M+V GLTRENVASHLQKYR+YL+R+ G+S Sbjct: 179 DNNSSSVNEGNGRSSRKRKEEEVDDQGDD----KEDSSSLKKPRVVWSVELHQQFVAAVNQLGVDKAVPKKILEMMNVPGLTRENVASHLQKYRIYLRRLGGVS 278
BLAST of EVM_prediction_HIC_ASM_8.517 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr3:3369814-3370821 FORWARD LENGTH=335) HSP 1 Score: 322.398 bits (825), Expect = 1.507e-109 Identity = 211/363 (58.13%), Postives = 237/363 (65.29%), Query Frame = 0 Query: 1 MREDDSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDIRNPVNGNGNGNGNALSQHQQLQQ---QQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLP-YVPVAAL----HQQQMAVAAAVGNPHLQGHQYHRQM--SHFGSPANGQFE---------------------------HHLFARQAQPQQVHRMGAP-VHSTVPSSYVEDLES--ANGGRKVLTLFPTGDD* 323 MREDDS+WFARWEE+LPS EEL+P+SQ+LISPDLA+AFDIR P +GNGN N H Q Q P++ N+S ++FAA+ SA++GSGGA GDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQ G S G +DPATD LFASSPVPAHFLHP +SDHF+P +VP+A L A AAA NPHLQ Q+HRQ+ +HFGSP NG F L RQ Q Q + RM P +HS V S+YVEDLES ANGGR VLTLFPT DD* Sbjct: 1 MREDDSDWFARWEEELPSPEELMPISQSLISPDLALAFDIRTPNHGNGNSNQPHHHHHHQTTPPTPSQLQLPSSQANSS----------AEFAAD-SADLGSGGAAGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQ---------------GLSSGGGAGSDPATDRLFASSPVPAHFLHPNRVPSSDHFMPSFVPIATLQQQQQMAAAAAAAAAANPHLQPPQFHRQIAAAHFGSPTNGGFSSPTSNGQFGSPTSNGFGSPTTNGKFDPSFLAVRQTQQQPIQRMSTPSLHSPV-SNYVEDLESANANGGRTVLTLFPTRDD* 336
BLAST of EVM_prediction_HIC_ASM_8.517 vs. Araport11
Match: | (Symbols: no symbol available | no full name available | chr5:1503393-1504193 FORWARD LENGTH=266) HSP 1 Score: 249.98 bits (637), Expect = 4.423e-82 Identity = 170/334 (50.90%), Postives = 201/334 (60.18%), Query Frame = 0 Query: 1 MREDDSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDIRNPVNGNGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLP-YVPVAALHQQQMAVAAAVGNPHLQGHQYHRQMS--HFGSPANGQFEHHLFARQA--------QPQQVHRMGAPVHSTVPSSYVEDLESANGGRKVLTLFPTGDD* 323 MRE+DSNWFA+WEE+LPS EELIPLSQ+LI+PDLA+AFD+ + NNNSNS Q+ NS+ +G + GDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRM+ GGGG G HLFASSPVP HFLHP +R +SD F+P +VP++ QQ +AA HRQ+S +F SP + ARQ +P +H +HS V ++Y +DL+S G + VLTLFPT DD* Sbjct: 1 MREEDSNWFAKWEEELPSPEELIPLSQSLITPDLAIAFDL------------------------------HRNNNSNSGQPL--PQTTPPQPNSSAEIAGDSTGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMKSGGGGGGSGDSD------------------HLFASSPVPPHFLHPTSRQSSDLFIPSFVPIST---QQQHIAAP------PSQFLHRQISAVNFTSPTKATDQAMFLARQQSELQQPVFKPSSLH-----LHSQV-ANYTQDLKS--GAKTVLTLFPTRDD* 267
BLAST of EVM_prediction_HIC_ASM_8.517 vs. Araport11
Match: | (Symbols: MYBC1 | | chr2:17097772-17098518 REVERSE LENGTH=248) HSP 1 Score: 215.698 bits (548), Expect = 7.253e-69 Identity = 132/228 (57.89%), Postives = 155/228 (67.98%), Query Frame = 0 Query: 1 MREDDSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDIRNPVNGNGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLP 228 MRED+ NWF RWEE+LPS EELIP+SQTLI+P LA+AF I +P + G+ A+ HQ+LQ + + SDF +S ++GSG GG EPARTLKRPRLVWTPQLHKRFVDAV HLGIKNAVPKTIMQLMSV+GLTRENVASHLQKYRLYL+RMQG + G +G + +D ATD LFASSPVPAHFL P D+ +P Sbjct: 1 MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAI-YHQKLQS------STTPTTPTPTPPPMMMNSDFGGGDSTDLGSGSIGG-EPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQGGN----------GNGITGGHVIVSDSATDRLFASSPVPAHFLSP------DYLMP 204
BLAST of EVM_prediction_HIC_ASM_8.517 vs. Araport11
Match: | (Symbols: LUX, PCL1 | PHYTOCLOCK 1, LUX ARRHYTHMO | chr3:17183248-17184219 FORWARD LENGTH=323) HSP 1 Score: 166.777 bits (421), Expect = 5.464e-49 Identity = 121/311 (38.91%), Postives = 156/311 (50.16%), Query Frame = 0 Query: 5 DSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDI----------------------RNPVNG-NGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLPYVPVAALH--QQQMAVAAAVGNPHLQG-----------HQYHRQMSHFGSPANGQFEHHLFARQ 279 D + + WE LPS E+L LS +LI P+LA+AF I R +G N + + N + + ++ P + + SN + ++ G +A + E SG D +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKYRLYLKRMQGL+ G A+D LF+S+PVP G VP+ + QQ M + + +QG HQ HR H G+ NG FE + + Q Sbjct: 15 DGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRGGSSGPNTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDSGTE--DLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLTNEGPS-------------------ASDKLFSSTPVPPQSFQDIGGGGGSSGNVGVPIPGAYGTQQMMQMPVYAHHMGMQGYHHQNHNHDPYHQNHRH--HHGAGGNGAFESNPYMMQ 302
BLAST of EVM_prediction_HIC_ASM_8.517 vs. Araport11
Match: | (Symbols: LUX, PCL1 | PHYTOCLOCK 1, LUX ARRHYTHMO | chr3:17183248-17184219 FORWARD LENGTH=323) HSP 1 Score: 166.777 bits (421), Expect = 5.464e-49 Identity = 121/311 (38.91%), Postives = 156/311 (50.16%), Query Frame = 0 Query: 5 DSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDI----------------------RNPVNG-NGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLPYVPVAALH--QQQMAVAAAVGNPHLQG-----------HQYHRQMSHFGSPANGQFEHHLFARQ 279 D + + WE LPS E+L LS +LI P+LA+AF I R +G N + + N + + ++ P + + SN + ++ G +A + E SG D +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKYRLYLKRMQGL+ G A+D LF+S+PVP G VP+ + QQ M + + +QG HQ HR H G+ NG FE + + Q Sbjct: 15 DGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRGGSSGPNTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDSGTE--DLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLTNEGPS-------------------ASDKLFSSTPVPPQSFQDIGGGGGSSGNVGVPIPGAYGTQQMMQMPVYAHHMGMQGYHHQNHNHDPYHQNHRH--HHGAGGNGAFESNPYMMQ 302
BLAST of EVM_prediction_HIC_ASM_8.517 vs. Araport11
Match: | (Symbols: LUX, PCL1 | PHYTOCLOCK 1, LUX ARRHYTHMO | chr3:17183248-17184989 FORWARD LENGTH=324) HSP 1 Score: 164.851 bits (416), Expect = 3.684e-48 Identity = 115/293 (39.25%), Postives = 148/293 (50.51%), Query Frame = 0 Query: 5 DSNWFARWEEDLPSYEELIPLSQTLISPDLAVAFDI----------------------RNPVNG-NGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADPATDHLFASSPVPAHFLHPGARGNSDHFLPYVPVAALHQQQMAVAAAVGNPHLQGHQYHRQMSHFGSPANGQFEHH 274 D + + WE LPS E+L LS +LI P+LA+AF I R +G N + + N + + ++ P + + SN + ++ G +A + E SG D +TLKRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKYRLYLKRMQGL+ G A+D LF+S+PVP G VP+ + Q + V H+ YH Q +H P + HH Sbjct: 15 DGDRVSEWEMGLPSDEDLASLSYSLIPPNLAMAFSITPERSRTIQDVNRASETTLSSLRGGSSGPNTSSSNNNVEEEDRVGSSSPGSDSKKQKTSNGDGDDGGGVDPDSAMAAEEGDSGTE--DLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLTNEGPS-------------------ASDKLFSSTPVPPQSFQDIGGGGGSSGNVGVPIPGAYGTQQMMQMPVYAHHMGMQGYHHQ-NHNHDPYHQNHRHH 285
BLAST of EVM_prediction_HIC_ASM_8.517 vs. Araport11
Match: | (Symbols: BOA | BROTHER OF LUX ARRHYTHMO | chr5:24004047-24004943 FORWARD LENGTH=298) HSP 1 Score: 152.91 bits (385), Expect = 6.723e-44 Identity = 96/226 (42.48%), Postives = 122/226 (53.98%), Query Frame = 0 Query: 11 RWEEDLPSYEELIPLSQTLISPDLAVAFDI-----RNPVNGNGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPL-------GQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADP--ATDHLFASSPVPAHFLHPGARGN 222 WE LP+ ++L PLSQ L+ LA+AF + R + N S + + S+ ++P G++ +++AE G G D +T KRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKYRLYLKR+QGL+ DP ++D LF+S+PVP G N Sbjct: 28 EWEIGLPNGDDLTPLSQYLVPSILALAFSMIPERSRTIHDVNRASQITLSSLRSSTNASSVMEEVVDRVESSVPGSDPKKQKKSDGGEAAAVEDSTAEEGDSGP-EDASGKTSKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLT-------------------TEEDPYSSSDQLFSSTPVPPQSFQDGGGSN 233
BLAST of EVM_prediction_HIC_ASM_8.517 vs. Araport11
Match: | (Symbols: BOA | BROTHER OF LUX ARRHYTHMO | chr5:24004047-24004943 FORWARD LENGTH=298) HSP 1 Score: 152.91 bits (385), Expect = 6.723e-44 Identity = 96/226 (42.48%), Postives = 122/226 (53.98%), Query Frame = 0 Query: 11 RWEEDLPSYEELIPLSQTLISPDLAVAFDI-----RNPVNGNGNGNGNALSQHQQLQQQQPLTPTNNNNNSNSNNNNPL-------GQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSGGGGGGAGGVNGGGSGAAGVNADP--ATDHLFASSPVPAHFLHPGARGN 222 WE LP+ ++L PLSQ L+ LA+AF + R + N S + + S+ ++P G++ +++AE G G D +T KRPRLVWTPQLHKRFVD VAHLGIKNAVPKTIMQLM+V+GLTRENVASHLQKYRLYLKR+QGL+ DP ++D LF+S+PVP G N Sbjct: 28 EWEIGLPNGDDLTPLSQYLVPSILALAFSMIPERSRTIHDVNRASQITLSSLRSSTNASSVMEEVVDRVESSVPGSDPKKQKKSDGGEAAAVEDSTAEEGDSGP-EDASGKTSKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRIQGLT-------------------TEEDPYSSSDQLFSSTPVPPQSFQDGGGSN 233
BLAST of EVM_prediction_HIC_ASM_8.517 vs. Araport11
Match: | (Symbols: RR1, ARR1 | response regulator 1 | chr3:5756820-5759139 FORWARD LENGTH=620) HSP 1 Score: 104.375 bits (259), Expect = 1.797e-24 Identity = 52/103 (50.49%), Postives = 71/103 (68.93%), Query Frame = 0 Query: 73 NNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS 175 ++NS+S N +S E G DE A LK+PR+VW+ +LH++FV AV LG++ AVPK I++LM+V GLTRENVASHLQKYR+YL+R+ G+S Sbjct: 127 DDNSSSVNEGNNWRSSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVS 229
BLAST of EVM_prediction_HIC_ASM_8.517 vs. Araport11
Match: | (Symbols: RR1, ARR1 | response regulator 1 | chr3:5756113-5759139 FORWARD LENGTH=690) HSP 1 Score: 104.375 bits (259), Expect = 2.109e-24 Identity = 52/103 (50.49%), Postives = 71/103 (68.93%), Query Frame = 0 Query: 73 NNNSNSNNNNPLGQSDFAAENSAEMGSGGAGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLS 175 ++NS+S N +S E G DE A LK+PR+VW+ +LH++FV AV LG++ AVPK I++LM+V GLTRENVASHLQKYR+YL+R+ G+S Sbjct: 197 DDNSSSVNEGNNWRSSSRKRKDEEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQKYRIYLRRLGGVS 299 The following BLAST results are available for this feature:
BLAST of EVM_prediction_HIC_ASM_8.517 vs. ExPASy TrEMBL
Analysis Date: 2024-01-25 (Blastp of Citrus sinensis cv. Gannanzao v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of EVM_prediction_HIC_ASM_8.517 vs. ExPASy Swiss-Prot
Analysis Date: 2023-08-23 (Blastp of Citrus sinensis cv. Newhall v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of EVM_prediction_HIC_ASM_8.517 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Citrus sinensis cv. Gannanzao v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus sinensis cv. Gannanzao v1.0 proteins
Date Performed: 2024-01-25 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >evm.model.HIC_ASM_8.517-csg_v1 ID=evm.model.HIC_ASM_8.517-csg_v1; Name=EVM_prediction_HIC_ASM_8.517; organism=Citrus sinensis; type=mRNA; length=969bpback to top protein sequence of evm.model.HIC_ASM_8.517-csg_v1 >evm.model.HIC_ASM_8.517-csg_v1 ID=evm.model.HIC_ASM_8.517-csg_v1; Name=evm.model.HIC_ASM_8.517-csg_v1; organism=Citrus sinensis; type=polypeptide; length=323bpback to top mRNA from alignment at HIC_ASM_8:3460794..3461762+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=969bp; location=Sequence derived from: HIC_ASM_8:3460794..3461762+ (Citrus sinensisback to top Coding sequence (CDS) from alignment at HIC_ASM_8:3460794..3461762+ >evm.model.HIC_ASM_8.517-csg_v1 ID=evm.model.HIC_ASM_8.517-csg_v1; Name=EVM_prediction_HIC_ASM_8.517; organism=Citrus sinensis; type=CDS; length=969bp; location=Sequence derived from: HIC_ASM_8:3460794..3461762+ (Citrus sinensisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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