orange1.1g011295m.v1.1, orange1.1g011295m.v1.1_Csinensis_154_v1.1 (mRNA) Citrus sinensis
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of orange1.1g011295m.v1.1 vs. DB:SwissProt
Match: Y1141_ARATH (G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 OS=Arabidopsis thaliana OX=3702 GN=At1g11410 PE=3 SV=3) HSP 1 Score: 460.685 bits (1184), Expect = 2.772e-153 Identity = 234/472 (49.58%), Postives = 321/472 (68.01%), Query Frame = 1 Query: 1 MRLGWDKRTGFNRYLTAWKSPDDPGSGNCSFKMDLAGFSQVSLYKSDVKWWRAGSWTGQRLSGVPEMTRNFIFNITYMDNQDEVFVYYSLNNPSILSRMVVNETGFEQRFTWSSQDRRWIGFWTAPKEQCDYYGHCGPNSNCSPYHADEFECTCLPGFEPKYPKEWSLRDGSGGCKRKLGTSTCQKGEGFIKLTLVKVPDTSVAAHVDMNLGLKACEEKCLGNCSCVAYASAYAET-NGGIGCLIYHGDLNDTRTYTNAGQDLFVRXXXXXXXXXXQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXCYFFLWRR--LDTRIGXXXXXXXXXXXFLNSSTRLSDREASTSAKRNKDTGNVDVTFFELSTVLAATDNFSTSNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFVAICHQSMHW 1407
M+ G+ +++G +R +T+W+SP DPGSGN +++++ GF Q+ +YK WWR GSWTGQR SGVPEMT FIFNI++++N DEV + Y + + S+ +RMV+NETG QRF W+ +D++WIGFW+AP+++CD Y HCG N C ++FEC+CLPG+EPK P++W LRD S GC R S C EGF KL VK+P+TS A +VDMN+ LK CE++CL NCSCVAYASAY E+ +G GCL +HG++ DTRTY ++GQD ++R A N S + R + + ++A+V+ +L+ CY R+ R+ + L S L + E + ++ ++ FELST+ AT+NF+ NKLG GGFGPVYKG L NG EIAVKRLS +SGQG+EEFKNEV LI+KLQHRNLV++LGCC+E +EKML+YE++PNKSLDYFIF + W
Sbjct: 158 MKFGFTRQSGVDRIMTSWRSPGDPGSGNITYRIERRGFPQMMMYKGLTLWWRTGSWTGQRWSGVPEMTNKFIFNISFVNNPDEVSITYGVLDASVTTRMVLNETGTLQRFRWNGRDKKWIGFWSAPEDKCDIYNHCGFNGYCDSTSTEKFECSCLPGYEPKTPRDWFLRDASDGCTRIKADSICNGKEGFAKLKRVKIPNTS-AVNVDMNITLKECEQRCLKNCSCVAYASAYHESQDGAKGCLTWHGNMLDTRTYLSSGQDFYLR-VDKSELARWNGNGASGKKRLVLILISLIAVVMLLLISFHCYLRKRRQRTQSNRLRKAPSSFAPSSFDLEDSFILEELEDKSRSR--------ELPLFELSTIATATNNFAFQNKLGAGGFGPVYKGVLQNGMEIAVKRLSKSSGQGMEEFKNEVKLISKLQHRNLVRILGCCVEFEEKMLVYEYLPNKSLDYFIFHEEQRAELDW 619
BLAST of orange1.1g011295m.v1.1 vs. DB:SwissProt
Match: SD18_ARATH (Receptor-like serine/threonine-protein kinase SD1-8 OS=Arabidopsis thaliana OX=3702 GN=SD18 PE=1 SV=1) HSP 1 Score: 362.844 bits (930), Expect = 1.700e-115 Identity = 204/478 (42.68%), Postives = 286/478 (59.83%), Query Frame = 1 Query: 1 MRLGWDKRTGFNRYLTAWKSPDDPGSGNCSFKMDLAGFSQVSLYKSDVKWWRAGSWTGQRLSGVPEMT--RNFIFNITYMDNQDEVFVYYSLNNPSILSRMVVNETGFEQRFTWSSQDRRWIGFWTAPKEQCDYYGHCGP----NSNCSPYHADEFECTCLPGFEPKYPKEWSLRDGSGGCKRKLGTSTCQKGEGFIKLTLVKVPDTSVAAHVDMNLGLKACEEKCLGNCSCVAYASAYAETNGGIGCLIYHGDLNDTRTYTNAGQDLFVRXXXXXXXXXXQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXCYFFLWRRLDTRIGXXXXXXXXXXXFLNSSTRLSDREASTSAK---RNKDTGNVDVTFFELSTVLAATDNFSTSNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFVAICHQSMHW 1407
M+LGWD +TGFNR++ +WKSPDDP SG+ SFK++ GF ++ L+ + + +R+G W G R SGVPEM +FN T +++EV + + + SR+ ++ +G QRFTW + W FW APK+QCD Y CG +SN SP C C+ GF+P+ P+ W LRDGS GC RK S C G+GF++L +K+PDT+ A+ VD +G+K CE+KCL +C+C A+A+ +G GC+ + G+L D R Y GQDL+VR A +L + + + V +LLL FFLW+R R + L S L + +S + R +T ++++ E V AT+NFS +NKLGQGGFG VYKGKL +GQE+AVKRLS TS QG +EFKNEV LIA+LQH NLV+LL CC++ EKMLIYE++ N SLD +F + ++W
Sbjct: 167 MKLGWDAKTGFNRFIRSWKSPDDPSSGDFSFKLETEGFPEIFLWNRESRMYRSGPWNGIRFSGVPEMQPFEYMVFNFT--TSKEEVTYSFRITKSDVYSRLSISSSGLLQRFTWIETAQNWNQFWYAPKDQCDEYKECGVYGYCDSNTSPV------CNCIKGFKPRNPQVWGLRDGSDGCVRKTLLS-CGGGDGFVRLKKMKLPDTTTAS-VDRGIGVKECEQKCLRDCNCTAFANTDIRGSGS-GCVTWTGELFDIRNYAKGGQDLYVRLAATDLEDKRNR---------SAKIIGSSIGVSVLLLLSFIIFFLWKRKQKR--SILIETPIVDHQLRSRDLLMNEVVISSRRHISRENNTDDLELPLMEFEEVAMATNNFSNANKLGQGGFGIVYKGKLLDGQEMAVKRLSKTSVQGTDEFKNEVKLIARLQHINLVRLLACCVDAGEKMLIYEYLENLSLDSHLFDKSRNSKLNW 622 HSP 2 Score: 58.9214 bits (141), Expect = 8.428e-8 Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 3 Query: 1380 GYMSPEYALGGLFSTKSDVFSFGVLLLEII 1469
GYMSPEYA+ G+FS KSDVFSFGVLLLEII
Sbjct: 693 GYMSPEYAMDGIFSMKSDVFSFGVLLLEII 722
BLAST of orange1.1g011295m.v1.1 vs. DB:SwissProt
Match: RKS1_ARATH (G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 OS=Arabidopsis thaliana OX=3702 GN=RKS1 PE=3 SV=3) HSP 1 Score: 325.865 bits (834), Expect = 2.122e-101 Identity = 146/266 (54.89%), Postives = 191/266 (71.80%), Query Frame = 1 Query: 1 MRLGWDKRTGFNRYLTAWKSPDDPGSGNCSFKMDLAGFSQVSLYKSDVKWWRAGSWTGQRLSGVPEMTRNFIFNITYMDNQDEVFVYYSLNNPSILSRMVVNETGFEQRFTWSSQDRRWIGFWTAPKEQCDYYGHCGPNSNCSPYHADEFECTCLPGFEPKYPKEWSLRDGSGGCKRKLGTSTCQKGEGFIKLTLVKVPDTSVAAHVDMNLGLKACEEKCLGNCSCVAYASAYAETN-GGIGCLIYHGDLNDTRTYTNAGQDLFVR 795
MRLG+ ++ G +R LT+WKS DPGSG+ +M+ GF Q+ LYK WWR GSWTG R SGVPEM +IFN ++++N+DEV Y + + S+++R +VNETG RFTW ++D+RW FW+ PKEQCD Y HCGPN C + FECTCLPGFEPK+P+ W LRD SGGC +K S C + +GF+KL +K+PDTS A+ VDMN+ LK C+++CL NCSCVAYASAY E+ G IGCL +HG + D RTY N+GQD ++R
Sbjct: 155 MRLGFTRKDGLDRSLTSWKSHGDPGSGDLILRMERRGFPQLILYKGVTPWWRMGSWTGHRWSGVPEMPIGYIFNNSFVNNEDEVSFTYGVTDASVITRTMVNETGTMHRFTWIARDKRWNDFWSVPKEQCDNYAHCGPNGYCDSPSSKTFECTCLPGFEPKFPRHWFLRDSSGGCTKKKRASICSEKDGFVKLKRMKIPDTSDAS-VDMNITLKECKQRCLKNCSCVAYASAYHESKRGAIGCLKWHGGMLDARTYLNSGQDFYIR 419 HSP 2 Score: 164.081 bits (414), Expect = 3.767e-42 Identity = 76/115 (66.09%), Postives = 94/115 (81.74%), Query Frame = 1 Query: 1063 NVDVTFFELSTVLAATDNFSTSNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFVAICHQSMHW 1407
N ++ F+L+T++AAT+NFS+ NKLG GGFGPVYKG L N EIAVKRLS SGQG+EEFKNEV LI+KLQHRNLV++LGCC+E +EKML+YE++PNKSLDYFIF + W
Sbjct: 497 NRELPLFDLNTIVAATNNFSSQNKLGAGGFGPVYKGVLQNRMEIAVKRLSRNSGQGMEEFKNEVKLISKLQHRNLVRILGCCVELEEKMLVYEYLPNKSLDYFIFHEEQRAELDW 611
BLAST of orange1.1g011295m.v1.1 vs. DB:SwissProt
Match: SRK6_BRAOV (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. viridis OX=3713 GN=SRK6 PE=1 SV=2) HSP 1 Score: 317.775 bits (813), Expect = 3.492e-98 Identity = 191/477 (40.04%), Postives = 278/477 (58.28%), Query Frame = 1 Query: 1 MRLGWDKRTGFNRYLTAWKSPDDPGSGNCSFKMDLAGFSQVSLYKSDVKWWRAGSWTGQRLSGVPEMTRNFIFNITYMDNQDEVFVYYSLNNPSILSRMVVNETGFEQRFTWSSQDRRWIGFWTAPKE-QCDYYGHCGPNSNCSPYHADEFECTCLPGFEPKYPKEWSLRDGSGGCKRKLGTSTCQKGEGFIKLTLVKVPDTSVAAHVDMNLGLKACEEKCLGNCSCVAYASAYAETNGGIGCLIYHGDLNDTRTY-TNA--GQDLFVRXXXXXXXXXXQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXCYFFLWRRLDTRIGXXXXXXXXXX----XFLNSSTRLSDREASTSAKRNKDTGNVDVTFFELSTVLAATDNFSTSNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFVAICHQSMHW 1407
M+LG++ +TG NR+LT+W+S DDP SGN S+K++ + L + + R+G W G R SG+PE + +++N +EV + + N S SR+ + G+ QR TW R W FW++P + QCD Y CGP + C + C C+ GF P+ ++W R +GGC R+ T G+GF ++ +K+P+T++A VD ++G+K C+++C+ +C+C A+A+A NGG GC+I+ L D R Y T+A GQDL+VR AA++A + II V +LL L F LW+R R L +N S RE S K + +++ E+ TV+ AT+NFS+ NKLGQGGFG VYKG+L +G+EIAVKRLS TS QG +EF NEV LIA+LQH NLV++LGCC+E DEKMLIYE++ N SLD ++F ++W
Sbjct: 169 MKLGYNLKTGLNRFLTSWRSSDDPSSGNFSYKLETQSLPEFYLSRENFPMHRSGPWNGIRFSGIPEDQKLSYMVYNFIENNEEVAYTFRMTNNSFYSRLTLISEGYFQRLTWYPSIRIWNRFWSSPVDPQCDTYIMCGPYAYCDVNTSP--VCNCIQGFNPRNIQQWDQRVWAGGCIRR--TQLSCSGDGFTRMKKMKLPETTMAT-VDRSIGVKECKKRCISDCNCTAFANADIR-NGGSGCVIWTERLEDIRNYATDAIDGQDLYVRLAAADIAKKRN-----------ASGKIISLTVGVSVLLLLIMFCLWKRKQKRAKASAISIANTQRNQNLPMNEMVLSSKREFSGEYKFEE----LELPLIEMETVVKATENFSSCNKLGQGGFGIVYKGRLLDGKEIAVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGKTRRSKLNW 624
BLAST of orange1.1g011295m.v1.1 vs. DB:SwissProt
Match: SD16_ARATH (Receptor-like serine/threonine-protein kinase SD1-6 OS=Arabidopsis thaliana OX=3702 GN=SD16 PE=1 SV=2) HSP 1 Score: 317.005 bits (811), Expect = 6.703e-98 Identity = 193/475 (40.63%), Postives = 268/475 (56.42%), Query Frame = 1 Query: 1 MRLGWDKRTG-FNRYLTAWKSPDDPGSGNCSFKMDLAGFSQVSLYKSDVKWWRAGSWTGQRLSGVPEMTRNFIFNITYMDNQDEVFVYYSLNNPSILSRMVVNETGFEQRFTWSSQDRRWIGFWTAPKEQCDYYGHCGP----NSNCSPYHADEFECTCLPGFEPKYPKEWSLRDGSGGCKRKLGTSTCQKGEGFIKLTLVKVPDTSVAAHVDMNLGLKACEEKCLGNCSCVAYASAYAETNGGIGCLIYHGDLNDTRTYTNAGQDLFVRXXXXXXXXXXQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXCYFFLWRRLDTRIGXXXXXXXXXXXFLNS-STRLSDREASTSAKRNKDTGNVDVTFFELSTVLAATDNFSTSNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFVAICHQSMHW 1407
M++GWD ++G FNR L +WK+ DDP SG+ S K+ +GF + +Y + +R+G W G R S VP M + ++ +N +V Y +N +I S + ++ TG QR TW + W W +PK+ CD Y CG ++N SP C C+ GFEP ++ +LRD S GC RK S C +GF++L +++PDT+ VD +GLK CEE+CL C+C A+A+ NGG GC+I+ G L D R Y GQDL+VR A +L + K + + V +LLL F W+R R Q + +S L S ++K NK T +++ E + AT+NFST NKLGQGGFG VYKG L +G+EIAVKRLS S QG +EF NEV LIAKLQH NLV+LLGCC++K EKMLIYE++ N SLD +F +++W
Sbjct: 165 MKMGWDNKSGGFNRILRSWKTTDDPSSGDFSTKLRTSGFPEFYIYNKESITYRSGPWLGNRFSSVPGMKPVDYIDNSFTENNQQVVYSYRVNKTNIYSILSLSSTGLLQRLTWMEAAQSWKQLWYSPKDLCDNYKECGNYGYCDANTSPI------CNCIKGFEP-MNEQAALRDDSVGCVRKTKLS-CDGRDGFVRLKKMRLPDTT-ETSVDKGIGLKECEERCLKGCNCTAFANTDIR-NGGSGCVIWSGGLFDIRNYAKGGQDLYVRVAAGDLEDKRIK---------SKKIIGSSIGVSILLLLSFIIFHFWKRKQKRSITIQTPIVDLVRSQDSLMNELVKASRSYTSKENK-TDYLELPLMEWKALAMATNNFSTDNKLGQGGFGIVYKGMLLDGKEIAVKRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEYLENLSLDSHLFDQTRSSNLNW 619 HSP 2 Score: 58.9214 bits (141), Expect = 8.131e-8 Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 3 Query: 1380 GYMSPEYALGGLFSTKSDVFSFGVLLLEII 1469
GYMSPEYA+ G+FS KSDVFSFGVLLLEII
Sbjct: 690 GYMSPEYAMDGIFSMKSDVFSFGVLLLEII 719
BLAST of orange1.1g011295m.v1.1 vs. DB:SwissProt
Match: SD17_ARATH (Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana OX=3702 GN=SD17 PE=1 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 7.242e-98 Identity = 193/476 (40.55%), Postives = 268/476 (56.30%), Query Frame = 1 Query: 1 MRLGWDKRTGFNRYLTAWKSPDDPGSGNCSFKMDLAGFSQVSLYKSDVKWWRAGSWTGQRLSGVPEMTRNFIFNITYMDNQDEVFVYYSLNNPSILSRMVVNETGFEQRFTWSSQDRRWIGFWTAPKEQCDYYGHCGP----NSNCSPYHADEFECTCLPGFEPKYPKEWSLRDGSGGCKRKLGTSTCQKGEGFIKLTLVKVPDTSVAAHVDMNLGLKACEEKCLGNCSCVAYASAYAETNGGIGCLIYHGDLNDTRTYTNAGQDLFVRXXXXXXXXXXQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXCYFFLWRRLDTR---IGXXXXXXXXXXXFLNSSTRLSDREASTSAKRNKDTGNVDVTFFELSTVLAATDNFSTSNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFVAICHQSMHW 1407
M+LGWD++TGFNR L +WK+ DDP SG S K++ + F + + + +R+G W G R S VP + + +++EV Y +N ++ SR+ +N G QR TW + W W +PK+ CD Y CG +SN P C C+ GF+P + W LRDGS GC RK S C +GF +L +K+PDT+ A VD +GLK C+E+CL +C+C A+A+A NGG GC+I+ ++ D R Y GQDL+VR AAEL + K + V +LLL F W+R R I + R L + +S R ++ K+++ + L+T AT+NFS NKLGQGGFG VYKG+L +G+EIAVKRLS S QG +EF NEV LIAKLQH NLV+LLGCC++K EKMLIYE++ N SLD +F +++W
Sbjct: 161 MKLGWDQKTGFNRILRSWKTTDDPSSGEFSTKLETSEFPEFYICSKESILYRSGPWNGMRFSSVPGTIQVDYMVYNFTASKEEVTYSYRINKTNLYSRLYLNSAGLLQRLTWFETTQSWKQLWYSPKDLCDNYKVCGNFGYCDSNSLP------NCYCIKGFKPVNEQAWDLRDGSAGCMRKTRLS-CDGRDGFTRLKRMKLPDTT-ATIVDREIGLKVCKERCLEDCNCTAFANADIR-NGGSGCVIWTREILDMRNYAKGGQDLYVRLAAAELEDKRIK---------NEKIIGSSIGVSILLLLSFVIFHFWKRKQKRSITIQTPNVDQVRSQDSLINDVVVSRRGYTSKEKKSEYLELPLLELEALAT---ATNNFSNDNKLGQGGFGIVYKGRLLDGKEIAVKRLSKMSSQGTDEFMNEVRLIAKLQHINLVRLLGCCVDKGEKMLIYEYLENLSLDSHLFDQTRSSNLNW 615 HSP 2 Score: 58.9214 bits (141), Expect = 8.118e-8 Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 3 Query: 1380 GYMSPEYALGGLFSTKSDVFSFGVLLLEII 1469
GYMSPEYA+ G+FS KSDVFSFGVLLLEII
Sbjct: 686 GYMSPEYAMDGIFSMKSDVFSFGVLLLEII 715
BLAST of orange1.1g011295m.v1.1 vs. DB:SwissProt
Match: Y1133_ARATH (G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 OS=Arabidopsis thaliana OX=3702 GN=At1g11330 PE=1 SV=3) HSP 1 Score: 280.796 bits (717), Expect = 2.727e-84 Identity = 174/481 (36.17%), Postives = 255/481 (53.01%), Query Frame = 1 Query: 1 MRLGWDKRTGFNRYLTAWKSPDDPGSGNCSFKMDLAGFSQVSLYKSDVKWWRAGSWTGQRLSGVPEMTRNFIFNITYMDNQDEVFVYYSLNNPSILSRMVVNETGFEQRFTWSSQDRRWIGFWTAPKEQCDYYGHCGPNSNCSPYHADE-FECTCLPGFEPKYPKEWSLRDGSGGCKRKL-----------GTSTCQKGEGFIKLTLVKVPDTSVAAHVDMNLGLKACEEKCLGNCSCVAYASAYAETNGGIGCLIYHGDLNDTRTYTNAGQDLFVRXXXXXXXXXXQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXCYFFLWRRLDTRIGXXXXXXXXXXXFLNSSTRLSDREASTSAKRNKDTGNVDVTFFELSTVLAATDNFSTSNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFVAICHQSMHW 1407
M LG D RTG N LT+W S DDP +GN + + F ++ ++K++V WR+G W GQ G+P M + +++ ++ + S N S + ++ G + WS+ R W P CD YG CG +C HA E C C+ GF PK EW+ + S GC RK K +GF+KL +KVP ++ + + C + CL NCSC AYA + GIGC+++ GDL D +++ +G DLF+R +EL + +I ++ +L+ +C R+ R + + + F SD E++++ + K+ + FE + +TD+FS NKLGQGGFGPVYKGKL GQEIAVKRLS SGQG+EE NEV++I+KLQHRNLVKLLGCC+E +E+ML+YE+MP KSLD ++F + + + W
Sbjct: 169 MTLGTDGRTGGNLKLTSWTSHDDPSTGNYTAGIAPFTFPELLIWKNNVPTWRSGPWNGQVFIGLPNMDSLLFLDGFNLNSDNQGTISMSYANDSFMYHFNLDPEGIIYQKDWSTSMRTWRIGVKFPYTDCDAYGRCGRFGSC---HAGENPPCKCVKGFVPKNNTEWNGGNWSNGCMRKAPLQCERQRNVSNGGGGGKADGFLKLQKMKVPISAERSEASE----QVCPKVCLDNCSCTAYA-----YDRGIGCMLWSGDLVDMQSFLGSGIDLFIRVAHSELKTHSN-----------LAVMIAAPVIGVMLIAAVCVLLACRKYKKRPAPAKDRSAELM-FKRMEALTSDNESASNQIKLKE-----LPLFEFQVLATSTDSFSLRNKLGQGGFGPVYKGKLPEGQEIAVKRLSRKSGQGLEELMNEVVVISKLQHRNLVKLLGCCIEGEERMLVYEYMPKKSLDAYLFDPMKQKILDW 620
BLAST of orange1.1g011295m.v1.1 vs. DB:SwissProt
Match: Y1661_ARATH (Putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 OS=Arabidopsis thaliana OX=3702 GN=At1g61610 PE=3 SV=1) HSP 1 Score: 270.396 bits (690), Expect = 2.133e-80 Identity = 168/485 (34.64%), Postives = 249/485 (51.34%), Query Frame = 1 Query: 1 MRLGWDKRTGFNRYLTAWKSPDDPGSGNCSFKMDLAGFSQVSLYKSDVKWWRAGSWTGQRLSGVPEMTR--NFIFNITYM---DNQDEVFVYYSLNNPSILSRMVVNETGFEQRFTWSSQDRRWIGFWTAPKEQCDYYGHCGPNSNCSPYHA-DEFECTCLPGFEPKYPKEWSLRDGSGGCKRKLGTSTCQ-----KGEGFIKLTLVKVPD-TSVAAHVDMNLGLKACEEKCLGNCSCVAYASAYAETNGGIGCLIYHGDLNDTRTYTNAGQDLFVRXXXXXXXXXXQKXXXXXXXXXXXXXXXXXXXXXXX-XXXXXCYFFLWRRLDTRIGXXXXXXXXXXXFLNSSTRLSDREASTSAKR---NKDTGNVDVTFFELSTVLAATDNFSTSNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFVAICHQSMHW 1407
MR+ + G NR WKS DP G S +D G ++ +++ + + WR+G W +G+P+M R N+I+ D V+ Y ++ S R + G E++F W+ R W P +C+ Y CG S C D +C+C+ GFEP + +W+ RD SGGC+R++ + Q + +GF L +KVPD SV H + + C++ C +CSC AYA GIGC+I+ DL D + G + +R ++L + ++ A ++ + + FLW++ D + S + +R+ S+S + D+ F +V +AT +F+ NKLGQGGFG VYKG + G+EIAVKRLS S QG+EEFKNE+LLIAKLQHRNLV+LLGCC+E +EKML+YE+MPNKSLD F+F S+ W
Sbjct: 162 MRVRVNPSLGENRAFIPWKSESDPSPGKYSMGIDPVGALEIVIWEGEKRKWRSGPWNSAIFTGIPDMLRFTNYIYGFKLSSPPDRDGSVYFTYVASDSSDFLRFWIRPDGVEEQFRWNKDIRNWNLLQWKPSTECEKYNRCGNYSVCDDSKEFDSGKCSCIDGFEPVHQDQWNNRDFSGGCQRRVPLNCNQSLVAGQEDGFTVLKGIKVPDFGSVVLHNNS----ETCKDVCARDCSCKAYALVV-----GIGCMIWTRDLIDMEHFERGGNSINIRLAGSKLGGGKENSTLWIIVFSVIGAFLLGLCIWILWKFKKSLKAFLWKKKDITV----------------SDIIENRDYSSSPIKVLVGDQVDTPDLPIFSFDSVASATGDFAEENKLGQGGFGTVYKGNFSEGREIAVKRLSGKSKQGLEEFKNEILLIAKLQHRNLVRLLGCCIEDNEKMLLYEYMPNKSLDRFLFDESKQGSLDW 621
BLAST of orange1.1g011295m.v1.1 vs. DB:SwissProt
Match: B120_ARATH (G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana OX=3702 GN=B120 PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 3.828e-78 Identity = 166/489 (33.95%), Postives = 252/489 (51.53%), Query Frame = 1 Query: 1 MRLGWDKRTGFNRYLTAWKSPDDPGSGNCSFKMDLAGFSQVSLYKSD-VKWWRAGSWTGQRLSGVPEMT--RNFIFNITYMDNQDE---VFVYYSLNNPSILSRMVVNETGFEQRFTWSSQDRRWIGFWTAPKEQCDYYGHCGPNSNCSPYHADEFECTCLPGFEPKYPKEWSLRDGSGGCKRKLGTSTCQKG-----EGFIKLTLVKVPDTSVAAH--VDMNLGLKACEEKCLGNCSCVAYASAYAETNGGIGCLIYHGDLNDTRTYTNAGQDLFVRXXXXXXXXXXQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXCYFFLWR--RLDTRIGXXXXXXXXXXXFLNSSTRLSDREASTSAKRN-----KDTGNVDVTFFELSTVLAATDNFSTSNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFVAICHQSMHW 1407
MR+ + +TG N +W+S DP GN S +D +G ++ L++ + + WR+G W +G+P M+ N+++ DE V+ Y ++PS+L R V G E+ W+ ++W F + P +CD Y CG C ++ C+C+ G+E WS GC+R+ C++ + F+ L VK+PD + H VD + C E+CL NCSC AY+ GGIGC+I++ DL D + + G L +R +E+ + A + LI + LWR R G + + + T+ + ++ S + K ++ F L+ + AT++F N+LG+GGFGPVYKG L +G+EIAVKRLS SGQG++EFKNE++LIAKLQHRNLV+LLGCC E +EKML+YE+MPNKSLD+F+F + W
Sbjct: 164 MRVRVNPQTGDNHAFVSWRSETDPSPGNYSLGVDPSGAPEIVLWEGNKTRKWRSGQWNSAIFTGIPNMSLLTNYLYGFKLSSPPDETGSVYFTYVPSDPSVLLRFKVLYNGTEEELRWNETLKKWTKFQSEPDSECDQYNRCGKFGICDMKGSNGI-CSCIHGYEQVSVGNWS-----RGCRRRTPLK-CERNISVGEDEFLTLKSVKLPDFEIPEHNLVDP----EDCRERCLRNCSCNAYSLV-----GGIGCMIWNQDLVDLQQFEAGGSSLHIRLADSEVGENRKTKIAVIVAVLVGVILIGIFA-----------LLLWRFKRKKDVSGAYCGKNTDTSVVVADLTKSKETTSAFSGSVDIMIEGKAVNTSELPVFSLNAIAIATNDFCKENELGRGGFGPVYKGVLEDGREIAVKRLSGKSGQGVDEFKNEIILIAKLQHRNLVRLLGCCFEGEEKMLVYEYMPNKSLDFFLFDETKQALIDW 625 HSP 2 Score: 57.3806 bits (137), Expect = 2.091e-7 Identity = 25/30 (83.33%), Postives = 28/30 (93.33%), Query Frame = 3 Query: 1380 GYMSPEYALGGLFSTKSDVFSFGVLLLEII 1469
GYMSPEYA+ GLFS KSDV+SFGVLLLEI+
Sbjct: 696 GYMSPEYAMEGLFSVKSDVYSFGVLLLEIV 725
BLAST of orange1.1g011295m.v1.1 vs. DB:SwissProt
Match: SD129_ARATH (G-type lectin S-receptor-like serine/threonine-protein kinase SD1-29 OS=Arabidopsis thaliana OX=3702 GN=SD129 PE=1 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.203e-76 Identity = 175/480 (36.46%), Postives = 247/480 (51.46%), Query Frame = 1 Query: 7 LGWDKRTGFNRYLTAWKSPDDPGSGNCSFKMDLAGFSQVSLYKSDVKWWRAGSWTGQRLSGVPEMTRNFIFNITYMDNQDE---VFVYYSLNNPSILSRMVVNETGFEQRFTWSSQDRRWIGFWTAPKEQCDYYGHCGPNSNCSPYHADEFECTCLPGFEPKYPKEWSLRDGSGGCKRKLGTSTCQ-----KGEG-----FIKLTLVKVPDTSVAAHVDMNLGLKACEEKCLGNCSCVAYASAYAETNGGIGCLIYHGDLNDTRTYTNAGQDLFVRXXXXXXXXXXQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXCYFFLWRRLDTRIGXXXXXXXXXXXFLNSSTRLSDREASTSAKRNKDTGNVDVTFFELSTVLAATDNFSTSNKLGQGGFGPVYKGKLANGQEIAVKRLSTTSGQGIEEFKNEVLLIAKLQHRNLVKLLGCCLEKDEKMLIYEFMPNKSLDYFIFVAICHQSMHW 1407
L +D G R LT WKS DP G S ++ +Q + + V +WR G W R SG+ + +++ + + + F Y +L N + LS + + G + + W + W + P+ CD YG CGP C +D +C CL GF PK +EW + + GC R+ S CQ K +G F ++T VK PD A L + C + CLGNCSC A+A GIGCL+++G+L DT + ++G+ LF+R ++ELA +++ + LI+V LWR R +A + +D V+ FFE+ T+ AT+NFS SNKLGQGGFGPVYKGKL +G+EI VKRL+++SGQG EEF NE+ LI+KLQHRNLV+LLG C++ +EK+LIYEFM NKSLD FIF + W
Sbjct: 154 LMYDTSNGKKRVLTTWKSNSDPSPGEFSLEITPQIPTQGLIRRGSVPYWRCGPWAKTRFSGISGIDASYVSPFSVVQDTAAGTGSFSYSTLRNYN-LSYVTLTPEG-KMKILWDDGNN-WKLHLSLPENPCDLYGRCGPYGLC--VRSDPPKCECLKGFVPKSDEEWGKGNWTSGCVRRTKLS-CQAKSSMKTQGKDTDIFYRMTDVKTPDLHQFASF---LNAEQCYQGCLGNCSCTAFAYI-----SGIGCLVWNGELADTVQFLSSGEFLFIRLASSELAGSSRRKIIVGTTVSLSIFLILVFAA----------IMLWRY-----------------------RAKQNDAWKNGFERQDVSGVN--FFEMHTIRTATNNFSPSNKLGQGGFGPVYKGKLVDGKEIGVKRLASSSGQGTEEFMNEITLISKLQHRNLVRLLGYCIDGEEKLLIYEFMVNKSLDIFIFDPCLKFELDW 584 The following BLAST results are available for this feature:
BLAST of orange1.1g011295m.v1.1 vs. DB:SwissProt
Analysis Date: 2018-06-08 (C. sinensis v1.1 CDS) Total hits: 10 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >orange1.1g011295m.v1.1_Csinensis_154_v1.1 ID=orange1.1g011295m.v1.1_Csinensis_154_v1.1; Name=orange1.1g011295m.v1.1; organism=Citrus sinensis; type=mRNA; length=3523bpback to top mRNA from alignment at scaffold00010:1357405..1360927- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=3523bp; location=Sequence derived from: scaffold00010:1357405..1360927- (Citrus sinensisback to top Coding sequence (CDS) from alignment at scaffold00010:1357405..1360927- >orange1.1g011295m.v1.1_Csinensis_154_v1.1 ID=orange1.1g011295m.v1.1_Csinensis_154_v1.1; Name=orange1.1g011295m.v1.1; organism=Citrus sinensis; type=CDS; length=1470bp; location=Sequence derived from: scaffold00010:1357405..1360927- (Citrus sinensisback to top |