Cs6g19230.1, Cs6g19230.1_Hzau_Valencia_v2.0 (mRNA) Citrus sinensis
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Cs6g19230.1 vs. DB:SwissProt
Match: PP404_ARATH (Pentatricopeptide repeat-containing protein At5g38730 OS=Arabidopsis thaliana OX=3702 GN=At5g38730 PE=2 SV=1) HSP 1 Score: 736.102 bits (1899), Expect = 0.000e+0 Identity = 361/589 (61.29%), Postives = 455/589 (77.25%), Query Frame = 1 Query: 10 SLVALNSDTKFIKTISAIVLKGHWAKLLYPNIASSLTSTAIHKVL---LNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK-IHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG-ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEM 1761
+L++ N + ++I A VLKG+W +L + S L +AI + L+L++ PSLS +FF W +S +P+ KHSLQS W MI ILTK+KHFK+A +L+K+A R+ LS+P VL +LV + +DP+ SHV SWL+I+YA M D + VF+Q+R L PHL ACTVLLNSL K RLTD VWK++KKMV+LGVVANIH+YNVL+HAC KS D +K EKLL EME K V D+FTYNTLI++YCKK MH+EAL+VQDRMER G++P+IVTYNS IHGF REGRMREA RLFR+IK T NHVTYTTLIDGYCR ND++EALRLREVM ++G PGVVTYNSILRKLC++GRIR+ANRLL EM+ KKI PDN+TCNTLINAYCKI D SA+KVK +M+E+GL LD ++YKALIHGFCK E++ AKE LF M++ GFSP Y +YSWLVDG+ N+N ++ + KLL+EF RGLC DV++YR LIRR CK E+VDYA+ LF M+ G++GDSVI+T++AYAYWR G+ S + D MY RRLM+ LK+Y+S SASYA DN++L FWSHV DR L+SK I +EM
Sbjct: 3 NLLSANREALIAQSICATVLKGNWKNILKHKVDSGLLKSAITTQVISELSLFSGYGGPSLSWSFFIWTDS-LPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYAGDNDVLRFFWSHVGDRCLISKSILREM 590
BLAST of Cs6g19230.1 vs. DB:SwissProt
Match: PPR26_ARATH (Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis thaliana OX=3702 GN=At1g09680 PE=3 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 8.237e-73 Identity = 147/500 (29.40%), Postives = 265/500 (53.00%), Query Frame = 1 Query: 97 PNIASSLTSTAIHKV--LLNLYNCCHIPSLSC-AFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFL-STPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWR 1578
P+I L S ++H V L+N +N +P S AFFK+ S P ++ ++++++ + L ++ F AQ+++E + R S SV +LV++ P ++ L+I Y +L D +Q F R H + C LL+ + K T +W Y +++ G N++++N+L++ CK ++ +K+ E+ + ++ + ++NTLI YCK G E ++ +ME+ PD+ TY++LI+ C+E +M A LF ++ +G PN V +TTLI G+ R +++ + M +KG+ P +V YN+++ CK G + A +++ M + + PD +T TLI+ +C+ GD +A++++ M + G+ LD+ + AL+ G CK + A+ L ML AG P +Y+ ++D +C K + + KLL E S G V Y L+ CK ++ A L + M G++ D + Y +L + R
Sbjct: 71 PSIRKVLPSLSVHHVVDLIN-HNPLSLPQRSIFAFFKFISSQ-PGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTP-MCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHR 567 HSP 2 Score: 160.229 bits (404), Expect = 9.426e-41 Identity = 86/277 (31.05%), Postives = 153/277 (55.23%), Query Frame = 1 Query: 796 GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDM 1620
G ++ +N L++ FC+EG + +A+++F +I + P V++ TLI+GYC+ +L+E RL+ M P V TY++++ LCKE ++ A+ L +EM ++ + P++V TLI+ + + G+ + +ML GL D Y L++GFCK ++ A+ I+ GM+ G P +Y+ L+DG+C + E L++ E G+ +D + AL+ CK+ +V A+R M GI D V YT + A+ + G+ + +L +M
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511 HSP 3 Score: 120.939 bits (302), Expect = 1.602e-27 Identity = 66/240 (27.50%), Postives = 124/240 (51.67%), Query Frame = 1 Query: 982 EVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 1701
E++ A G V +N ++ K CKEG I DA ++ +E+ ++ + P V+ NTLIN YCK+G+ ++K++M ++ D FTY ALI+ CK +MD A + M G P+ ++ L+ G+ + + + + +S+GL D+ +Y L+ FCK + A+ + + M G+ D + YT+L + R G+ + +I +M + + + + + K+ ++D
Sbjct: 230 EILDA-GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVID 468 HSP 4 Score: 116.701 bits (291), Expect = 3.792e-26 Identity = 69/244 (28.28%), Postives = 119/244 (48.77%), Query Frame = 1 Query: 895 GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 1626
G N + L++ +C+ ++ +A ++ + + + + P VV++N+++ CK G + + RL ++M + + PD T + LINA CK A + + M + GL+ + + LIHG + E+D+ KE ML G P Y+ LV+G+C + A ++D + RGL D Y LI FC+ V+ A + M NGI D V +++L + G L +M R
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478
BLAST of Cs6g19230.1 vs. DB:SwissProt
Match: PP360_ARATH (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX=3702 GN=At5g01110 PE=2 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 8.339e-73 Identity = 161/604 (26.66%), Postives = 276/604 (45.70%), Query Frame = 1 Query: 151 LYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRME-----------------------------------REGISPDIVTYNSLIHGFCREGRMREARRLFRDIK-------------------------------------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR--LMITLKIYRSFSASYAKDNEI--LDLFWSHVVDRGL 1734
LY C + +L F PN+KH+ S MIHIL ++ AQ+ L ++ R +S ++N+L + N V L+ Y + ++ + F +R + AC L+ SL + ++ W VY+++ + GV N++ N++++A CK ++KV L +++ K V D+ TYNTLI+ Y KG+ EA + + M R G+SPD TY SL+ C++G + E ++F D++ G P++V YT LI GYCR + A+ LR M +G VVTYN+IL LCK + +A++L NEM E+ + PD+ T LI+ +CK+G+ +AM++ +M E + LD TY L+ GF K ++D AKEI M+ P+ SYS LV+ C+K + ++ DE +S+ + V + ++I+ +C+ + M G + D + Y +L Y + R ++ M + L+ + Y S + + N++ ++ +++RG+
Sbjct: 85 LYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGV 688 HSP 2 Score: 169.088 bits (427), Expect = 1.949e-43 Identity = 92/332 (27.71%), Postives = 176/332 (53.01%), Query Frame = 1 Query: 451 LQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLE--AGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVD 1434
L F+ ++ L+P T+L+ + + + + +M+Q G ++ YN ++H CK + + +KL EM + + D +T LI +CK G A+ + +M+ + I D+VTYN+L+ GF + G + A+ ++ D+ K P ++Y+ L++ C L EA R+ + M +K + P V+ NS+++ C+ G D L +M + PD ++ NTLI + + + + A + +M E GL+ D FTY +++HGFC+ +M A+ +L M++ G +P +Y+ +++G+ +++N ++ DE + RG D
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726 HSP 3 Score: 167.162 bits (422), Expect = 9.070e-43 Identity = 110/455 (24.18%), Postives = 206/455 (45.27%), Query Frame = 1 Query: 409 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIAL-----------------------------------YCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSIL-----------------------------------RKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGML------DAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGD 1539
L+ Y++ + ++ ++ + M P ++ ++N L K + +V+ +M++ G+ + Y L+ CK DV + EK+ +M +DV DL ++++++L YC+KGM A+ +++ M ++G + D+VTYN+++HG C+ + EA +LF ++ + P+ T T LIDG+C+ +L+ A+ L + M K + VVTYN++L LC +G + +A R+ +EM K I P + CN++I YC+ G+ + +M+ G + D +Y LI+GF + M A FG++ G P +Y+ ++ G+C +N + +L + + RG+ D S Y +I F ++ + A R+ + M G D
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKA----FGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726 HSP 4 Score: 117.472 bits (293), Expect = 3.651e-26 Identity = 80/343 (23.32%), Postives = 158/343 (46.06%), Query Frame = 1 Query: 106 ASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK----GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDN 1122
A + I+ +L+ Y C +S A E + ++ T++H L K K A + ++ R PD S+ L+ L+ + L Q+ +++F +M+ + + LL+ K D +++ MV ++ Y++L++A C + + ++ EM K+++ + N++I YC+ G + + ++M EG PD ++YN+LI+GF RE M +A L + ++ G P+ TY +++ G+CR N ++EA + M +GV P TY ++ + + +A R+ +EM ++ +PD+
Sbjct: 404 AGLIPDNVIYTILIQGY--CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF---------------PD--SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
BLAST of Cs6g19230.1 vs. DB:SwissProt
Match: PPR12_ARATH (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 1.281e-67 Identity = 151/509 (29.67%), Postives = 252/509 (49.51%), Query Frame = 1 Query: 190 FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFL----STPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKD-RLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEI 1695
FF WA S +L+S +IH+ +K K AQ+++ R L S + LV + D + V + + ++ +VF++M + L+ + +C V L L+KD T V+++ ++GV N+ YN++IH C+ + + LL ME K D+ +Y+T++ YC+ G + + + M+R+G+ P+ Y S+I CR ++ EA F ++ +G P+ V YTTLIDG+C+ D+ A + M ++ + P V+TY +I+ C+ G + +A +L +EM K + PD+VT LIN YCK G A +V N M++AG + TY LI G CK ++D A E+L M G P+ +Y+ +V+G C N E +KL+ EF + GL D Y L+ +CK ++D AQ + M G G+ V + L + G + +L+ M + + + S Y N +
Sbjct: 107 FFDWARS---RRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612 HSP 2 Score: 222.246 bits (565), Expect = 2.684e-62 Identity = 124/413 (30.02%), Postives = 218/413 (52.78%), Query Frame = 1 Query: 469 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 1701
M + P + + + ++N + D VWK+ + M + G+ N ++Y +I C+ + + E+ EM + + D Y TLI +CK+G A M I+PD++TY ++I GFC+ G M EA +LF ++ KG P+ VT+T LI+GYC+A +++A R+ M G P VVTY +++ LCKEG + AN LL+EM + + P+ T N+++N CK G+ A+K+ AGL D TY L+ +CK+ EMD A+EIL ML G P+ +++ L++G+C E KLL+ +++G+ + + + +L++++C + + A ++ M G+ D Y +L + +A K + +M + +++ Y + K + L+
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684 HSP 3 Score: 215.312 bits (547), Expect = 1.080e-59 Identity = 140/486 (28.81%), Postives = 237/486 (48.77%), Query Frame = 1 Query: 232 SLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAK 1683
++ S+ +IH + + K A ++L + L+ + TP V++ S +V Y ++ + M+ L P+ + ++ L + + + +M++ G++ + +Y LI CK D+ K EM +D+ D+ TY +I+ +C+ G EA + M +G+ PD VT+ LI+G+C+ G M++A R+ + G +PN VTYTTLIDG C+ DL+ A L M G+ P + TYNSI+ LCK G I +A +L+ E + D VT TL++AYCK G+ A ++ ML GL T+ L++GFC ++ +++L ML G +P+ +++ LV YC +NN +A + + SRG+ D Y L++ CK + A LF M+G G Y+ L + + + ++ D M R L +I+ FS + K
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY--TPDVIS---------------YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYK 713 HSP 4 Score: 78.5666 bits (192), Expect = 7.181e-14 Identity = 56/227 (24.67%), Postives = 111/227 (48.90%), Query Frame = 1 Query: 1024 YNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCK-IGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILD 1701
++ + L G +R+A R+ +M + +CN + K TA+A+ V E G+ + +Y +IH C+ + A +L M G++P SYS +V+GYC + + KL++ +GL + +Y ++I C+ K+ A+ F+ M GIL D+V+YT+L + + G+ +A S +M+ R + + Y + + + + ++++
Sbjct: 178 FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVE 404 HSP 5 Score: 73.1738 bits (178), Expect = 3.209e-12 Identity = 58/254 (22.83%), Postives = 105/254 (41.34%), Query Frame = 1 Query: 958 LEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG-RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH 1716
L EA R+ E M G+ V + N L +L K+ + A + E E + + + N +I+ C++G A + M G D +Y +++G+C+ E+D +++ M G P+ Y ++ C + E + +G+ D VY LI FCK+ + A + F M I D + YT++ + + G+ + +M+ + L + Y K + D F H
Sbjct: 191 LREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
BLAST of Cs6g19230.1 vs. DB:SwissProt
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 2.348e-67 Identity = 155/535 (28.97%), Postives = 267/535 (49.91%), Query Frame = 1 Query: 67 LKGHWAKLLYPNIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR--DFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLN-SLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 1656
LK H +L + ++++ T A +LL N +L F WA P+ +L+ +HILTK K +K+AQ + E +A + D V +L + +D S V +V Y+ L + L + + H MP + + +L+ ++ R V+K+M++ V N+ YN+LI C + ++D L +ME K ++ TYNTLI YCK + + M +G+ P++++YN +I+G CREGRM+E + ++ +G + + VTY TLI GYC+ + +AL + M G+ P V+TY S++ +CK G + A L++M + + P+ T TL++ + + G A +V M + G TY ALI+G C +M+ A +L M + G SP SYS ++ G+C + + L++ E V +G+ D Y +LI+ FC++ + A L+ M G+ D YT+L AY G+ + + ++M + ++ + Y
Sbjct: 32 LKRHPYQLHH--LSANFTPEAASNLLLKSQN---DQALILKFLNWAN---PHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTY 558 HSP 2 Score: 230.72 bits (587), Expect = 2.416e-65 Identity = 123/355 (34.65%), Postives = 195/355 (54.93%), Query Frame = 1 Query: 448 GLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRD--IKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLF 1506
L +FD+M +P++ L++ K R D +K+ + M G+ N+ YNV+I+ C+ + +V +L EM + D TYNTLI YCK+G ++AL + M R G++P ++TY SLIH C+ G M A ++G PN TYTTL+DG+ + + EA R+ M G P VVTYN+++ C G++ DA +L +M EK ++PD V+ +T+++ +C+ D A++VK M+E G+ D TY +LI GFC+ R A ++ ML G P +Y+ L++ YC + + E L+L +E V +G+ DV Y LI K+ + A+RL
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578 HSP 3 Score: 199.134 bits (505), Expect = 8.413e-54 Identity = 124/448 (27.68%), Postives = 217/448 (48.44%), Query Frame = 1 Query: 409 LVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDR--------LTDMVWKVYK---------------------------KMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMI 1641
L+ Y L+ DG ++ M + L P+L + V++N L ++ LT+M + Y +M++ G+ ++ Y LIH+ CK+ ++++ + L +M + + + TY TL+ + +KG EA V M G SP +VTYN+LI+G C G+M +A + D+K G +P+ V+Y+T++ G+CR+ D++EALR++ M KG+ P +TY+S+++ C++ R ++A L EM + PD T LINAYC GD A+++ N M+E G++ D TY LI+G K AK +L + PS +Y L++ C+ ++ +LI+ FC K + A ++F M G D Y + + + RAG+ + + +M + ++
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSN-------------------IEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLL 673 HSP 4 Score: 192.586 bits (488), Expect = 1.462e-51 Identity = 125/442 (28.28%), Postives = 215/442 (48.64%), Query Frame = 1 Query: 535 DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLI--ALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF--RDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKE-----------------------------------ILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSH--VVDRGLM 1737
D +V+K ++ L + ++++++ + + S +DK ++ + + +YN ++ + K+ + + ++ +E + +SP++ TYN LI GFC G + A LF + KG PN VTY TLIDGYC+ +++ +L MA KG+ P +++YN ++ LC+EGR+++ + +L EMN + + D VT NTLI YCK G+ A+ + ML GL TY +LIH CKA M+ A E +L M D GFSPS +Y+ L++G+C E + +L++ +GL DV Y ++ FC+ VD A R+ M GI D++ Y+SL + K D+ ++M R L Y + +Y + ++ H +V++G++
Sbjct: 113 DEYASLVFKSLQETYDL-CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQ-VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552 HSP 5 Score: 122.865 bits (307), Expect = 6.338e-28 Identity = 102/386 (26.42%), Postives = 174/386 (45.08%), Query Frame = 1 Query: 238 QSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVL--NALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLID---------------GYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCS 1338
+++ T++ ++ + A +L ++ F +PSV+ NAL+ N H ++ KM +D + V + M+ L P + + + +L+ + D +V ++MV+ G+ + Y+ LI C+ + L EM + D FTY LI YC +G +AL + + M +G+ PD+VTY+ LI+G ++ R REA+RL + + + P+ VTY TLI+ G+C + EA ++ E M K P YN ++ C+ G IR A L EM + VT L+ A K G V +L + + + K L+ + MD+ ++L M GF P+ S
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGF--SPSVVTYNALI--------NGHCVTG--------KM-EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
BLAST of Cs6g19230.1 vs. DB:SwissProt
Match: PP152_ARATH (Pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g15630 PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.977e-65 Identity = 152/556 (27.34%), Postives = 259/556 (46.58%), Query Frame = 1 Query: 100 NIASSLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVL-SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLFWSHVVDRGLMSKHIFKEMQ 1764
++A LT + + LL+L P+L+ F + + Y+ Q+ I +++K K +L+++ S ++ + LV HD + S +L LV L+M + ++ F M+ P C +L L++ + W Y M ++ + +N++ +N++I+ CK + K + L ME ++ + TYNTL+ + +G A + M+ +G PD+ TYN ++ C EGR E R ++I G P+ V+Y LI G DLE A R+ M +G+ P TYN+++ L E +I A L+ E+ EK I D+VT N LIN YC+ GD A + + M+ G+ QFTY +LI+ C+ + A E+ ++ G P + L+DG+C N + LL E + D Y L+R C + K + A+ L M+ GI D + Y +L Y + G+ K + D+M TL Y + +K+ E G +++ + +EM+
Sbjct: 64 HVADKLTPSLVSTTLLSL---VKTPNLAFNFV----NHIDLYRLDFQTQCLAIAVISKLSSPKPVTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI-GLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQE------------GELAEELLREMK 599 HSP 2 Score: 193.356 bits (490), Expect = 1.545e-52 Identity = 123/404 (30.45%), Postives = 196/404 (48.51%), Query Frame = 1 Query: 226 KHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHD--------------------DPDGNSH--VLSWLVIFYANLKMTQDGL--QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDG 1359
K ++ + MI++L K K A+ L + + T N LV+ PD ++ +LSW M +G +V +M+ L+P + +L+ + + +M + +MV+ G+V + YN LIH + ++ E L+ E+ K + D TYN LI YC+ G +A A+ D M +GI P TY SLI+ CR+ + REA LF + KG P+ V TL+DG+C +++ A L + M + P VTYN ++R LC EG+ +A L+ EM + I PD+++ NTLI+ Y K GDT A V++ ML G TY AL+ G K +E ++A+E+L M G P+ S+ +++
Sbjct: 222 KSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSW---------MCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616 HSP 3 Score: 80.4925 bits (197), Expect = 1.614e-14 Identity = 62/281 (22.06%), Postives = 121/281 (43.06%), Query Frame = 1 Query: 157 NCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVK-------------IHDD--PDG---NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDG 939
C + L AF E + ++ T+IH L ++A+ ++ +I + + N L+ +HD+ DG + L+ T++ ++F+++ + P L L++ D + + K+M + + + YN L+ C ++ +L+ EM+ + ++ D +YNTLI+ Y KKG A V+D M G +P ++TYN+L+ G + A L R++K G PN ++ ++I+
Sbjct: 336 GCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
BLAST of Cs6g19230.1 vs. DB:SwissProt
Match: PP440_ARATH (Pentatricopeptide repeat-containing protein At5g61400 OS=Arabidopsis thaliana OX=3702 GN=At5g61400 PE=2 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 6.252e-64 Identity = 148/489 (30.27%), Postives = 246/489 (50.31%), Query Frame = 1 Query: 190 FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALR-DFLSTPS-----VLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKGAT--PNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRR 1632
F+ + + + + LQS +IH+LT + A+ +++ + R S PS + NAL I P + V S L++ + + + ++ L V +M+ P AC +LN L + R D VW Y+ M+ G+V ++H+Y VL C K K EKLL EM ++ +++ Y I C+ EA + + M++ G+ P++ TY+++I G+C+ G +R+A L+++I A PN V + TL+DG+C+A +L A L M GV P + YN ++ CK G + +A LL+EM ++PD T LIN C A A ++ +M + TY +LIHG+CK M+ A ++ M +G P+ ++S L+DGYCN + +A + L E +G+ DV Y ALI K+ + A RL++ M GI + + L +W+ G D + ++R
Sbjct: 60 LFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQS-PKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCS---PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQR 544 HSP 2 Score: 169.088 bits (427), Expect = 1.098e-43 Identity = 106/362 (29.28%), Postives = 180/362 (49.72%), Query Frame = 1 Query: 388 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRF 1467
N + S ++ Y + ++ ++ V L+P++ L++ K R ++ MV+ GV N+++YN LIH CKS ++ + LL EME ++ D+FTY LI C + EA + +M+ E I P TYNSLIHG+C+E M +A L ++ G PN +T++TLIDGYC D++ A+ L M KG+ P VVTY +++ KE +++A RL ++M E I P++ T L++ + K G + A+ + + + LI G C+ + A M G +P CSY ++ G+ + + L + + G+ ++ V + L R +
Sbjct: 268 NLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFY 629 HSP 3 Score: 107.842 bits (268), Expect = 3.179e-23 Identity = 86/328 (26.22%), Postives = 142/328 (43.29%), Query Frame = 1 Query: 322 RDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPN-----------------------------------HVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKN 1194
R+ ++ S+ +VK DP N +V + L+ + + + + +M NL P + T+L+N L + ++++KM + + YN LIH CK ++++ L EM V ++ T++TLI YC A+ + M +GI PD+VTY +LI +E M+EA RL+ D+ G PN HV +T LI+G C+ + A R M + G+ P + +Y S+L+ +E RI D L +M + I P+ + L Y G SA + N
Sbjct: 318 RELVTARSLFVHMVKFGVDP--NLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTN 643
BLAST of Cs6g19230.1 vs. DB:SwissProt
Match: PP143_ARATH (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana OX=3702 GN=At2g02150 PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.369e-62 Identity = 151/518 (29.15%), Postives = 253/518 (48.84%), Query Frame = 1 Query: 112 SLTSTAIHKVLLNLYNCCHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG--ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLD-AGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIY 1656
+L + +VL+ L P L+ FFKW+ + +KHS++S+ + HIL + + A ++L+++ L + V + L + V L +L M ++ +Q F +M+ + P +C N L+H K D V++ +M R +FTYN +I CK+G A + + M+ G+ PD VTYNS+I GF + GR+ + F ++K P+ +TY LI+ +C+ L L M G+ P VV+Y++++ CKEG ++ A + +M + P+ T +LI+A CKIG+ + A ++ N ML+ G+ + TY ALI G C A M A+E LFG +D AG P+ SY+ L+ G+ N + L+LL+E RG+ D+ +Y I C EK++ A+ + N M+ GI +S+IYT+L AY+++G P +LD+M + +T+ +
Sbjct: 105 TLAPIWVPRVLVELK---EDPKLAFKFFKWSMTR-NGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSK--ADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSC-----------------------------------NGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE-LFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTF 580 HSP 2 Score: 155.992 bits (393), Expect = 7.747e-39 Identity = 94/320 (29.38%), Postives = 154/320 (48.12%), Query Frame = 1 Query: 712 TYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSF 1665
++ L ++ GM EA+ +M+R + P + N L+H F + G+ + +R F+D+ GA P TY +ID C+ D+E A L E M +G+ P VTYNS++ K GR+ D EM + PD +T N LIN +CK G ++ M GL + +Y L+ FCK M A + M G P+ +Y+ L+D C N +L +E + G+ +V Y ALI C E++ A+ LF M G++ + Y +L + + +A ++L+++ R + L +Y +F
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTF 513 HSP 3 Score: 124.79 bits (312), Expect = 1.551e-28 Identity = 86/347 (24.78%), Postives = 159/347 (45.82%), Query Frame = 1 Query: 403 SWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAK-DRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTY------------------------------------NSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSP 1326
S LV + M Q ++ + MR L+P+ + T L+++ K L+D +++ +M+Q+GV N+ Y LI C + + + E+L +M+ V +L +YN LI + K AL + + ++ GI PD++ Y + I G C ++ A+ + ++K G N + YTTL+D Y ++ + E L L + M + VVT+ +++ LCK+ ++ A L +M +K + PD +L++ K G+ A+ ++++M E G+ LD Y +L+ G ++ A+ L M+ G P
Sbjct: 371 STLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD-AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716 HSP 4 Score: 101.293 bits (251), Expect = 5.856e-21 Identity = 82/355 (23.10%), Postives = 163/355 (45.92%), Query Frame = 1 Query: 163 CHIPSLSCAFFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMERE-GISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLM 1218
C I +LS AF E + ++ ++ +I L + K A+ + K+ + + NAL IH + K L++ ++++ + P L + L + V +M + G+ AN +Y L+ A KS + + LL EM+ D+ + T+ LI CK + +A+ +R+ + G+ + + ++I G C++ ++ A LF + KG P+ YT+L+DG + ++ EAL LR+ MA G+ ++ Y S++ L +++ A L EM + I PD V C +++ + ++G A+++++ +++ L+
Sbjct: 413 CKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNAL--IHG---------------FVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLL 750 HSP 5 Score: 86.6557 bits (213), Expect = 2.171e-16 Identity = 58/233 (24.89%), Postives = 103/233 (44.21%), Query Frame = 1 Query: 1009 PGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 1707
PG ++++ L G + +A + ++M ++ P +CN L++ + K+G T + M+ AG FTY +I CK +++ A+ + M G P +Y+ ++DG+ + + +E DV Y ALI FCK K+ + M+GNG+ + V Y++L A+ + G + DM R L+ Y S + K + D F
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAF 422
BLAST of Cs6g19230.1 vs. DB:SwissProt
Match: PP432_ARATH (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2) HSP 1 Score: 223.787 bits (569), Expect = 1.723e-61 Identity = 144/521 (27.64%), Postives = 236/521 (45.30%), Query Frame = 1 Query: 178 LSCAFFKWA-ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK-------------------------------------GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYR 1626
L+ F KW + H +Q HIL + + + A+++L++++L S+ V AL+ + + N V L+ Y M QD L++F M ++ P ++ C +L S+ K VW K+M++ + ++ +N+LI+ C +K L+ +ME + TYNT++ YCKKG A+ + D M+ +G+ D+ TYN LIH CR R+ + L RD++ G +PNHVT+ LIDG+ + +EAL++ +M AKG+ P V+Y +L LCK A M + +T +I+ CK G A+ + N M + G+ D TY ALI+GFCK AKEI+ + G SP+ YS L+ C + +++ + + G D + L+ CK KV A+ M +GIL ++V + L Y +GE + D+M +
Sbjct: 52 LALKFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSS-FVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTK 571 HSP 2 Score: 162.54 bits (410), Expect = 9.365e-41 Identity = 113/421 (26.84%), Postives = 193/421 (45.84%), Query Frame = 1 Query: 586 GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLF--RDIKGATPNHV-----------------------------------TYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRLMITLKIYRSFSASYAKDNE--ILDLFWSHVVDRG 1731
GV A++ YN+LIH C+S+ + K LL +M + + + TYNTLI + +G A + + M G+SP+ VT+N+LI G EG +EA ++F + KG TP+ V TYT +IDG C+ L+EA+ L M+ G+ P +VTY++++ CK GR + A ++ + ++P+ + +TLI C++G A+++ M+ G D FT+ L+ CKA ++ A+E + M G P+ S+ L++GY N + DE G Y +L++ CK + A++ + D+V+Y +L A ++G + +M +R ++ Y S + + + I LF RG
Sbjct: 258 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 678 HSP 3 Score: 161.77 bits (408), Expect = 1.609e-40 Identity = 140/560 (25.00%), Postives = 235/560 (41.96%), Query Frame = 1 Query: 220 NYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTPSVLNALVKIHDDPDGNSHVLSWLVI--------------------FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQL----GVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREAR----RLFRDIKGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNG-ILGDSVIYTSLAYAYWRAGEPKA-----------------------------------CSDILDDMYRRRLMITLKIYRSFSASYAKDNEILDLF 1707
Y ++ ++ T++H K FK+A +L+ + + + N L IHD N +L++ ++N Q+ ++M L P+ V N+L +++ +K KM + G+ + Y VL+ CK+++ D M+ V TY +I CK G EA+ + + M ++GI PDIVTY++LI+GFC+ GR + A+ R++R G +PN + Y+TLI CR L+EA+R+ E M +G T+N ++ LCK G++ +A + M I P+ V+ + LIN Y G+ A V + M + G FTY +L+ G CK + A++ L + + Y+ L+ C N + L E V R + D Y +LI C+K K A + G +L + V+YT ++AG+ KA +D+L +M + L Y Y+K ++ F
Sbjct: 223 GYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNML--IHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPN----HVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR--VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSF 774 HSP 4 Score: 138.658 bits (348), Expect = 6.802e-33 Identity = 94/392 (23.98%), Postives = 172/392 (43.88%), Query Frame = 1 Query: 469 MRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIKG---ATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSDILDDMYRRRL 1635
M ++P+ + L+N + V+ +M ++G Y L+ CK + + EK L + D YNTL+ CK G +A+++ M + I PD TY SLI G CR+G+ A ++ + PN V YT +DG +A + + RE M G P +VT N+++ + G+I N LL EM + P+ T N L++ Y K D +++ + ++ G++ D+ T +L+ G C++ ++I +IL + G +++ L+ C L+ S G+ +D A++ + + ++ + + M GI +S Y L R G+ K + ++M ++
Sbjct: 534 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI 925 HSP 5 Score: 120.939 bits (302), Expect = 3.584e-27 Identity = 84/315 (26.67%), Postives = 154/315 (48.89%), Query Frame = 1 Query: 421 YANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDG 1359
Y+ + + + +M N P+L +LL+ +K + + +Y+ ++ G++ + + L+ C+S+ ++ K+L + V D +T+N LI+ C G A + M GIS D T ++++ R R +E+R + ++ +G +P Y LI+G CR D++ A ++E M A + P V ++++R L K G+ +A LL M + K+ P + TL++ CK G+ A++++ M GL LD +Y LI G C +M +A E+ M GF + +Y L+ G
Sbjct: 729 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRG 1043 HSP 6 Score: 120.168 bits (300), Expect = 5.953e-27 Identity = 118/531 (22.22%), Postives = 200/531 (37.66%), Query Frame = 1 Query: 388 NSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAV------------------------------------QDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGY-----------------------------------CRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEG-----------------------------------RIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYAYWRAGEPKACSD-ILDDMYRRRLMITLKI 1653
N+ L+ Y N VFD+M P LL L K K K + + + +YN L+ A CKS ++ K L EM + + D +TY +LI+ C+KG A+ +++M+ G +PDIVT N++I G+ R G++ + L ++ + PN TY L+ GY C +N LE L++ + +GV T+N ++ K C G R +++ +L+EM+++ I+P++ LIN C++GD +A VK M+ + A++ K + D A +L ML P+ S++ L+ C N L+L + GL +D+ Y LI C K + A L+ M+G+G L ++ Y +L + +D IL D+ R + ++ +
Sbjct: 542 NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMSL 1072
BLAST of Cs6g19230.1 vs. DB:SwissProt
Match: PP180_ARATH (Pentatricopeptide repeat-containing protein At2g32630 OS=Arabidopsis thaliana OX=3702 GN=At2g32630 PE=3 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 6.080e-60 Identity = 157/530 (29.62%), Postives = 262/530 (49.43%), Query Frame = 1 Query: 10 SLVALNSDTKFIKTISA-IVLKGHWAKLLY-PNIASSLTSTAIHKVLLNLYNCCHIPSLSCA-FFKWAESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRDFLSTP--SVLNALVK--IHDDPDGNSHVLSWLVI-FYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALIRRFCKKEKVDYAQRLFNLMQGNGILGDSVIYTSLAYA 1569
S V L+SD + + I+A +V K KL P++ +L S VL +P+ SC FFK N K L + T+ H L N+ F +++L + F P + +A+V I ++ LV Y + M ++GL+VFD M L +C V L + K R D+ +++++MV GV ++ +++ C+ +V+K +KL+ E K ++ + +TYNT+I Y K+ V M+++G+ + VTY L+ + G+M +A +LF +++ G + YT+LI CR +++ A L + + KG+ P TY +++ +CK G + A L+NEM K + V NTLI+ YC+ G A + + M + G D FT + F + + D AK+ LF M++ G S SY+ L+D YC + N E +L E S+G+ + Y +I +CK+ K+ A++L M+ NG+ DS YTSL +
Sbjct: 23 SPVLLSSDQEAARRITACLVEKSTIGKLQSNPSLLFNLNSNVTRLVLSE----PTLPTQSCIDFFKLLREFESNLKPDLTAVVTLSHRLYSNRRFNEMRSLLNSVVNDGFYKRPVEELGSAMVDCDISEEKFEFFEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHG 548 HSP 2 Score: 173.326 bits (438), Expect = 2.162e-45 Identity = 111/372 (29.84%), Postives = 170/372 (45.70%), Query Frame = 1 Query: 454 QVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNTLIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDI--KGATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGV-----------------------------------VTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINAYCKIGDTASAMKVKNRMLEAGLMLDQFTYKALIHGFCKAREMDIAKEILFGMLDAGFSPSYCSYSWLVDGYCXXXXXXXXXXXXDEFVSRGLCVDVSVYRALI 1458
++ + V + P + ++N+ K R V V K M + GVV N Y +L+ K+ + EKL EM + + +D+ Y +LI+ C+KG A + D + +G+SP TY +LI G C+ G M A L ++ KG V + TLIDGYCR ++EA + +VM KG V V+Y +++ CKEG + +A RL EM+ K + P+ +T N +I AYCK G A K++ M G+ D +TY +LIHG C A +D A + M G + +Y+ ++ G + L DE +G +D VY ALI
Sbjct: 245 KLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616 HSP 3 Score: 116.316 bits (290), Expect = 6.222e-26 Identity = 96/371 (25.88%), Postives = 164/371 (44.20%), Query Frame = 1 Query: 205 ESAVPNYKHSLQSHWTMIHILTKNKHFKSAQNMLEKIALRD----------FLSTPSVLNALV----KIHDDP-----DGNSHVLSWLVIFYANLKMTQDGLQVFDQMRVHNLMPHLHACTVLLNSLAKDRLTDMVWKVYKKMVQLGVVANIHLYNVLIHACCKSSDVDKVEKLLCEMEFKDVRADLFTYNT-----------------------------------LIALYCKKGMHYEALAVQDRMEREGISPDIVTYNSLIHGFCREGRMREARRLFRDIK--GATPNHVTYTTLIDGYCRANDLEEALRLREVMAAKGVYPGVVTYNSILRKLCKEGRIRDANRLLNEMNEKKIAPDNVTCNTLINA 1149
E +V K ++ T+I+ K + F + +L K+ +D L SV N + K+ D+ + + HV + L+ + + +FD++ L P + L++ + K + +M GV ++N LI C+ VD+ + ME K +AD+FT NT LI +YCK+G EA + M +G+ P+ +TYN +I+ +C++G+++EAR+L +++ G P+ TYT+LI G C A++++EA+RL M KG+ VTY ++ L K G+ +A L +EM K DN LI +
Sbjct: 249 EFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVL-KVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618 The following BLAST results are available for this feature:
BLAST of Cs6g19230.1 vs. DB:SwissProt
Analysis Date: 2018-06-07 (C. sinensis v2.0, HZAU CDS) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: C. sinensis v2.0 peptides
Date Performed: 2018-06-21 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Cs6g19230.1_Hzau_Valencia_v1.0 ID=Cs6g19230.1_Hzau_Valencia_v1.0; Name=Cs6g19230.1; organism=Citrus sinensis; type=mRNA; length=2341bpback to top protein sequence of Cs6g19230.1 >Cs6g19230.1_Hzau_Valencia_v2.0-protein ID=Cs6g19230.1_Hzau_Valencia_v2.0-protein; Name=Cs6g19230.1; organism=Citrus sinensis; type=polypeptide; length=593bpback to top protein sequence of Cs6g19230.1_Hzau_Valencia_v1.0 >Cs6g19230.1_Hzau_Valencia_v1.0 ID=Cs6g19230.1_Hzau_Valencia_v1.0; Name=Cs6g19230.1_Hzau_Valencia_v1.0; organism=Citrus sinensis; type=polypeptide; length=593bpback to top mRNA from alignment at chr6:19120174..19122514+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=2341bp; location=Sequence derived from: chr6:19120174..19122514+ (Citrus sinensisback to top Coding sequence (CDS) from alignment at chr6:19120174..19122514+ >Cs6g19230.1_Hzau_Valencia_v1.0 ID=Cs6g19230.1_Hzau_Valencia_v1.0; Name=Cs6g19230.1; organism=Citrus sinensis; type=CDS; length=1779bp; location=Sequence derived from: chr6:19120174..19122514+ (Citrus sinensisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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