Cs6g14090.1, Cs6g14090.1_Hzau_Valencia_v2.0 (mRNA) Citrus sinensis

Transcript Overview


Name	Cs6g14090.1
Unique Name	Cs6g14090.1_Hzau_Valencia_v1.0
Type	mRNA
Organism	Citrus sinensis (Sweet orange)
Sequence length	1733

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Citrus sinensis Valencia genome v1.0 (HZAU)	2013-01-22
C. sinensis v2.0, HZAU CDS	2018-06-07
C. sinensis v2.0 peptides	2018-06-21

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
cscsiL155	Citrus sinensis genome v1.1 (JGI)	Citrus sinensis
cscsiL625	Citrus sinensis genome v1.1 (JGI)	Citrus sinensis
csicsiL135	Citrus sinensis Valencia genome v1.0 (HZAU)	Citrus sinensis
cccsiL182	Citrus clementina genome v1.0 (JGI)	Citrus clementina
cccsiL292	Citrus clementina genome v1.0 (JGI)	Citrus clementina
cmcsiL380	Citrus maxima (C. grandis) genome v1.0	Citrus maxima
csifhR525	Fortunella hindsii genome v1.0	Fortunella hindsii
csifhR587	Fortunella hindsii genome v1.0	Fortunella hindsii
cmcsiL485	Citrus maxima (C. grandis) genome v1.0	Citrus maxima
csifhR622	Fortunella hindsii genome v1.0	Fortunella hindsii
csiptR387	Poncirus trifoliata genome v1.3.1 (JGI)	Poncirus trifoliata
clpcsiL397	Citrus limon L. Burm f. genome v1.0 - Primary	Citrus limon
clacsiL383	Citrus limon L. Burm f. genome v1.0 - Alternative	Citrus limon
clpcsiL489	Citrus limon L. Burm f. genome v1.0 - Primary	Citrus limon
clacsiL487	Citrus limon L. Burm f. genome v1.0 - Alternative	Citrus limon
csidvaR333	Citrus sinensis cv. Valencia DVS_A genome v1.0	Citrus sinensis
csidvbR352	Citrus sinensis cv. Valencia DVS_B genome v1.0	Citrus sinensis
csiswoR359	Citrus sinensis Di-Haploid Sweet Orange (DHSO) v3.0 (HZAU)	Citrus sinensis
csiswoR379	Citrus sinensis Di-Haploid Sweet Orange (DHSO) v3.0 (HZAU)	Citrus sinensis
csiswR406	Citrus sinensis Valencia genome v2.0 (HZAU)	Citrus sinensis
csiswR441	Citrus sinensis Valencia genome v2.0 (HZAU)	Citrus sinensis

Orthologs


Gene/Transcript	Assembly	Species
Cg6g014960.1	Citrus maxima (C. grandis) genome v1.0	Citrus maxima
sjg074250.1	Fortunella hindsii genome v1.0	Fortunella hindsii
Ptrif.0006s1430.1.v1.3.1	Poncirus trifoliata genome v1.3.1 (JGI)	Poncirus trifoliata
sjg005080.1	Fortunella hindsii genome v1.0	Fortunella hindsii
CL6G060096012.t1_alt	Citrus limon L. Burm f. genome v1.0 - Alternative	Citrus limon
CL6G024210011.t1_pri	Citrus limon L. Burm f. genome v1.0 - Primary	Citrus limon

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Cs_ont_6g008950.1	Citrus sinensis Di-Haploid Sweet Orange (DHSO) v3.0 (HZAU)	Citrus sinensis
gene-KPL71_018652-mRNA1	Citrus sinensis cv. Valencia DVS_B genome v1.0	Citrus sinensis
gene-KPL70_018463-mRNA1	Citrus sinensis cv. Valencia DVS_A genome v1.0	Citrus sinensis
Cs6g_pb012620.1	Citrus sinensis Valencia genome v2.0 (HZAU)	Citrus sinensis

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Cs6g14090	Cs6g14090_Hzau_Valencia_v1.0	Citrus sinensis	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Cs6g14090.1	Cs6g14090.1_Hzau_Valencia_v2.0-protein	Citrus sinensis	polypeptide
Cs6g14090.1_Hzau_Valencia_v1.0	Cs6g14090.1_Hzau_Valencia_v1.0	Citrus sinensis	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Cs6g14090.1.utr5.1	Cs6g14090.1.utr5.1_Hzau_Valencia_v1.0	Citrus sinensis	five_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Cs6g14090.1.exon.1	Cs6g14090.1.exon.1_Hzau_Valencia_v1.0	Citrus sinensis	exon
Cs6g14090.1.exon.2	Cs6g14090.1.exon.2_Hzau_Valencia_v1.0	Citrus sinensis	exon
Cs6g14090.1.exon.3	Cs6g14090.1.exon.3_Hzau_Valencia_v1.0	Citrus sinensis	exon
Cs6g14090.1.exon.4	Cs6g14090.1.exon.4_Hzau_Valencia_v1.0	Citrus sinensis	exon
Cs6g14090.1.exon.5	Cs6g14090.1.exon.5_Hzau_Valencia_v1.0	Citrus sinensis	exon
Cs6g14090.1.exon.6	Cs6g14090.1.exon.6_Hzau_Valencia_v1.0	Citrus sinensis	exon
Cs6g14090.1.exon.7	Cs6g14090.1.exon.7_Hzau_Valencia_v1.0	Citrus sinensis	exon
Cs6g14090.1.exon.8	Cs6g14090.1.exon.8_Hzau_Valencia_v1.0	Citrus sinensis	exon
Cs6g14090.1.exon.9	Cs6g14090.1.exon.9_Hzau_Valencia_v1.0	Citrus sinensis	exon
Cs6g14090.1.exon.10	Cs6g14090.1.exon.10_Hzau_Valencia_v1.0	Citrus sinensis	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Cs6g14090.1.cds.1	Cs6g14090.1.cds.1_Hzau_Valencia_v1.0	Citrus sinensis	CDS
Cs6g14090.1.cds.2	Cs6g14090.1.cds.2_Hzau_Valencia_v1.0	Citrus sinensis	CDS
Cs6g14090.1.cds.3	Cs6g14090.1.cds.3_Hzau_Valencia_v1.0	Citrus sinensis	CDS
Cs6g14090.1.cds.4	Cs6g14090.1.cds.4_Hzau_Valencia_v1.0	Citrus sinensis	CDS
Cs6g14090.1.cds.5	Cs6g14090.1.cds.5_Hzau_Valencia_v1.0	Citrus sinensis	CDS
Cs6g14090.1.cds.6	Cs6g14090.1.cds.6_Hzau_Valencia_v1.0	Citrus sinensis	CDS
Cs6g14090.1.cds.7	Cs6g14090.1.cds.7_Hzau_Valencia_v1.0	Citrus sinensis	CDS
Cs6g14090.1.cds.8	Cs6g14090.1.cds.8_Hzau_Valencia_v1.0	Citrus sinensis	CDS
Cs6g14090.1.cds.9	Cs6g14090.1.cds.9_Hzau_Valencia_v1.0	Citrus sinensis	CDS
Cs6g14090.1.cds.10	Cs6g14090.1.cds.10_Hzau_Valencia_v1.0	Citrus sinensis	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Cs6g14090.1.utr3.1	Cs6g14090.1.utr3.1_Hzau_Valencia_v1.0	Citrus sinensis	three_prime_UTR

Homology

[Close]

BLAST of Cs6g14090.1 vs. DB:SwissProt
Match: PCP_BOVIN (Lysosomal Pro-X carboxypeptidase OS=Bos taurus OX=9913 GN=PRCP PE=2 SV=1)

HSP 1 Score: 388.652 bits (997), Expect = 1.909e-129
Identity = 205/458 (44.76%), Postives = 284/458 (62.01%), Query Frame = 1

Query:  157 YKTKYHTQILDHFNYNPQSYQTFQQRYLINDTHWGGSKNNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSMPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLT-ATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPILNFDNIVSPYSFSNIITQDFRSVSENCYKVIKGSWKQIEETAKKPGGLEKLQKAFRIC----KSEKNLAIESWLSTAFVYTAMTDYPTPSNFLNPLPAFPVKEMCKAIDDPKTGNDVFAK-LYGAASVYYNYSGTAKCFDLNGDSDPH-GLSEWGWQACTEMIMLTGGDNKDSIFEESEEDYDARARYCKEAYGVDPRPNWITTEFGGHKIGLVLKRFASNIIFFNGLRDPWSGGGVLKNISKTVLALVEKEGAHHVDLRFSTKEDPQWLKDVRRREVEIIGKWISQYFQDL 1509
            Y  +Y  Q +DHF +N    +TF+QRYLI D +W   ++   I  YTGNEGDI WF  NTGFM+D+A + KA+LVF EHRYYG+S+P+G +   ++ ++    +L++ QALAD+A LI  LK+ +  A +  V+  GGSYGGMLAAWFR+KYPH+ +GALASSAPI  F+++V    F  I+T DF     NC + I+ SW  I   AKK  GL  L +A  +C    KS+    ++ W+S  +V  AM DYP  SNFL PLPA+PVK +C+        + V  + ++ A +VYYNYSG AKC +++  +    G+  W +QACTEM+M T  D  D +FE    +    +  C + +GV PRP+WI T +GG  I        +NIIF NG  DPWSGGGV K+I+ T+LA+V   GAHH+DLR S   DP  ++  R  EV+ + +WIS ++  L
Sbjct:   50 YSIRYIQQKVDHFGFNID--RTFKQRYLIADNYW--KEDGGSILFYTGNEGDIIWFCNNTGFMWDIAEEMKAMLVFAEHRYYGESLPFGAD---SFSDSRHLNFLTTEQALADFAKLIRYLKRTIPGARNQHVIALGGSYGGMLAAWFRMKYPHLVVGALASSAPIWQFNDLVPCDIFMKIVTTDFSQSGPNCSESIRRSWDAINRLAKKGTGLRWLSEALHLCTPLTKSQDVQRLKDWISETWVNVAMVDYPYESNFLQPLPAWPVKVVCQYFKYSNVPDTVMVQNIFQALNVYYNYSGQAKCLNVSETATSSLGVLGWSYQACTEMVMPTCSDGVDDMFEPHSWNMKEYSDDCFKQWGVRPRPSWIPTMYGGKNIS-----SHTNIIFSNGELDPWSGGGVTKDITDTLLAIVIPNGAHHLDLRASNALDPVSVQLTRSLEVKYMKQWISDFYVRL 495

[Close]

BLAST of Cs6g14090.1 vs. DB:SwissProt
Match: PCP_PONAB (Lysosomal Pro-X carboxypeptidase OS=Pongo abelii OX=9601 GN=PRCP PE=2 SV=1)

HSP 1 Score: 384.415 bits (986), Expect = 7.852e-128
Identity = 197/454 (43.39%), Postives = 277/454 (61.01%), Query Frame = 1

Query:  157 YKTKYHTQILDHFNYNPQSYQTFQQRYLINDTHWGGSKNNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSMPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLT-ATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPILNFDNIVSPYSFSNIITQDFRSVSENCYKVIKGSWKQIEETAKKPGGLEKLQKAFRICK---SEKNLAIESWLSTAFVYTAMTDYPTPSNFLNPLPAFPVKEMCKAIDDPKTGNDVFAK-LYGAASVYYNYSGTAKCFDLNGDSDPH-GLSEWGWQACTEMIMLTGGDNKDSIFEESEEDYDARARYCKEAYGVDPRPNWITTEFGGHKIGLVLKRFASNIIFFNGLRDPWSGGGVLKNISKTVLALVEKEGAHHVDLRFSTKEDPQWLKDVRRREVEIIGKWISQYF 1500
            Y   Y  Q +DHF +N  + +TF QRYL+ D +W   KN   I  YTGNEGDI WF  NTGFM+DVA + KA+LVF EHRYYG+S+P+G N    +K++    +L+S QALAD+A LI  LK+ +  A + PV+  GGSYGGMLAAWFR+KYPH+ +GALA+SAPI  F+++V    F  I+T DFR    +C + I+ SW  I   +    GL+ L  A  +C    S+    ++ W+S  +V  AM DYP  SNFL PLPA+P+K +C+ + +P   + +  + ++ A +VYYNYSG  KC +++  +    G   W +QACTE++M    +  D +FE    +    +  C + +GV PRP+WITT +GG  I        +NI+F NG  DPWSGGGV K+I+ T++A+   EGAHH+DLR     DP  +   R  EV  +  WI  ++
Sbjct:   48 YSVLYFQQKVDHFGFN--TVKTFNQRYLVADKYW--KKNGGSILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDN---TFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQFEDLVPCGVFMKIVTTDFRKSGPHCSESIRRSWDAINRLSNTGSGLQWLTGALHLCSPLTSQDIQHLKDWISETWVNLAMVDYPYASNFLQPLPAWPIKVVCQYLKNPNVSDSLLLQNIFQALNVYYNYSGQVKCLNISETATSSLGTLGWSYQACTEVVMPFCTNGVDDMFEPHSWNLKELSDDCFQQWGVRPRPSWITTMYGGKNIS-----SHTNIVFSNGELDPWSGGGVTKDITDTLVAVTISEGAHHLDLRTKNALDPTSVLLARSLEVRHMKNWIRDFY 489

[Close]

BLAST of Cs6g14090.1 vs. DB:SwissProt
Match: PCP_MOUSE (Lysosomal Pro-X carboxypeptidase OS=Mus musculus OX=10090 GN=Prcp PE=1 SV=2)

HSP 1 Score: 384.415 bits (986), Expect = 7.885e-128
Identity = 198/457 (43.33%), Postives = 279/457 (61.05%), Query Frame = 1

Query:  157 YKTKYHTQILDHFNYNPQSYQTFQQRYLINDTHWGGSKNNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSMPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLT-ATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPILNFDNIVSPYSFSNIITQDFRSVSENCYKVIKGSWKQIEETAKKPGGLEKLQKAFRICK---SEKNLAIESWLSTAFVYTAMTDYPTPSNFLNPLPAFPVKEMCKAIDDPKTGNDVFAK-LYGAASVYYNYSGTAKCFDLNGDSDPH-GLSEWGWQACTEMIMLTGGDNKDSIFEESEEDYDARARYCKEAYGVDPRPNWITTEFGGHKIGLVLKRFASNIIFFNGLRDPWSGGGVLKNISKTVLALVEKEGAHHVDLRFSTKEDPQWLKDVRRREVEIIGKWISQYFQDL 1509
            Y   Y  Q +DHF +     +TF+QRYL+ D HW   +N   I  YTGNEGDI WF  NTGFM+DVA + KA+LVF EHRYYG+S+P+G +   ++K++    +L+S QALAD+A LI  L+K +  A   PV+  GGSYGGMLAAWFR+KYPH+ +GALA+SAPI   D +V    F  I+T DFR     C + I+ SW  I++ +    GL+ L     +C    SEK   ++ W++  +V  AM +YP   NFL PLPA+P+KE+C+ + +P   + V  + ++ A SVYYNYSG A C +++  +    G   W +QACTEM+M    +  D +FE    D +  +  C   +GV PRP+W+TT +GG  I        SNIIF NG  DPWSGGGV ++I+ T++A+   +GAHH+DLR     DP  +   R  EV+ + KWI  ++ ++
Sbjct:   46 YSVLYFEQKVDHFGF--ADMRTFKQRYLVADKHW--QRNGGSILFYTGNEGDIVWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGQD---SFKDSQHLNFLTSEQALADFAELIRHLEKTIPGAQGQPVIAIGGSYGGMLAAWFRMKYPHIVVGALAASAPIWQLDGMVPCGEFMKIVTNDFRKSGPYCSESIRKSWNVIDKLSGSGSGLQSLTNILHLCSPLTSEKIPTLKGWIAETWVNLAMVNYPYACNFLQPLPAWPIKEVCQYLKNPNVSDTVLLQNIFQALSVYYNYSGQAACLNISQTTTSSLGSMGWSFQACTEMVMPFCTNGIDDMFEPFLWDLEKYSNDCFNQWGVKPRPHWMTTMYGGKNIS-----SHSNIIFSNGELDPWSGGGVTRDITDTLVAINIHDGAHHLDLRAHNAFDPSSVLLSRLLEVKHMKKWILDFYSNI 490

[Close]

BLAST of Cs6g14090.1 vs. DB:SwissProt
Match: PCP_HUMAN (Lysosomal Pro-X carboxypeptidase OS=Homo sapiens OX=9606 GN=PRCP PE=1 SV=1)

HSP 1 Score: 384.03 bits (985), Expect = 1.211e-127
Identity = 197/454 (43.39%), Postives = 277/454 (61.01%), Query Frame = 1

Query:  157 YKTKYHTQILDHFNYNPQSYQTFQQRYLINDTHWGGSKNNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSMPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLT-ATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPILNFDNIVSPYSFSNIITQDFRSVSENCYKVIKGSWKQIEETAKKPGGLEKLQKAFRICK---SEKNLAIESWLSTAFVYTAMTDYPTPSNFLNPLPAFPVKEMCKAIDDPKTGNDVFAK-LYGAASVYYNYSGTAKCFDLNGDSDPH-GLSEWGWQACTEMIMLTGGDNKDSIFEESEEDYDARARYCKEAYGVDPRPNWITTEFGGHKIGLVLKRFASNIIFFNGLRDPWSGGGVLKNISKTVLALVEKEGAHHVDLRFSTKEDPQWLKDVRRREVEIIGKWISQYF 1500
            Y   Y  Q +DHF +N  + +TF QRYL+ D +W   KN   I  YTGNEGDI WF  NTGFM+DVA + KA+LVF EHRYYG+S+P+G N   ++K++    +L+S QALAD+A LI  LK+ +  A + PV+  GGSYGGMLAAWFR+KYPH+ +GALA+SAPI  F+++V    F  I+T DFR    +C + I  SW  I   +    GL+ L  A  +C    S+    ++ W+S  +V  AM DYP  SNFL PLPA+P+K +C+ + +P   + +  + ++ A +VYYNYSG  KC +++  +    G   W +QACTE++M    +  D +FE    +    +  C + +GV PRP+WITT +GG  I        +NI+F NG  DPWSGGGV K+I+ T++A+   EGAHH+DLR     DP  +   R  EV  +  WI  ++
Sbjct:   48 YSVLYFQQKVDHFGFN--TVKTFNQRYLVADKYW--KKNGGSILFYTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPFGDN---SFKDSRHLNFLTSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQFEDLVPCGVFMKIVTTDFRKSGPHCSESIHRSWDAINRLSNTGSGLQWLTGALHLCSPLTSQDIQHLKDWISETWVNLAMVDYPYASNFLQPLPAWPIKVVCQYLKNPNVSDSLLLQNIFQALNVYYNYSGQVKCLNISETATSSLGTLGWSYQACTEVVMPFCTNGVDDMFEPHSWNLKELSDDCFQQWGVRPRPSWITTMYGGKNIS-----SHTNIVFSNGELDPWSGGGVTKDITDTLVAVTISEGAHHLDLRTKNALDPMSVLLARSLEVRHMKNWIRDFY 489

[Close]

BLAST of Cs6g14090.1 vs. DB:SwissProt
Match: DPP2_RAT (Dipeptidyl peptidase 2 OS=Rattus norvegicus OX=10116 GN=Dpp7 PE=1 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 9.356e-109
Identity = 182/459 (39.65%), Postives = 268/459 (58.39%), Query Frame = 1

Query:  157 YKTKYHTQILDHFNYNPQSYQTFQQRYLINDTHWGGSKNNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSMPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPILNFDNIVSPYSFSNIITQDFRSVSENCYKVIKGSWKQIEETAKKPGGLEKLQKAFRICK---SEKNLA-IESWLSTAFVYTAMTDYPTPSNFLNPLPAFPVKEMCKAIDDPKTGNDVFAKLYGAASVYYNYSGTAKCFDL----NGDSDPHGLS------EWGWQACTEMIMLTGGDNKDSIFEESEEDYDARARYCKEAYGVDPRPNWITTEFGGHKIGLVLKRFASNIIFFNGLRDPWSGGGVLKNISKTVLALVEKEGAHHVDLRFSTKEDPQWLKDVRRREVEIIGKWIS 1491
            ++  Y  Q +DHFN+   S +TF QR+L++D  W       PIF YTGNEGDI   A N+GF+ ++A + +ALLVF EHRYYGKS+P+G    +       T  L+  QALAD+A L+  L+ NL   D+P + FGGSYGGML+A+ R+KYPH+  GALA+SAP++    + +P  F   +T DF   S  C + ++ +++QI++   + G  + + + F  C+   S K+L  +  +   AF   AM DYP P+NFL PLPA PVK  C+ +     G  +   L   A + YN SG   CFD+       +DP G         W +QACTE+ +    +N   +F E     + R +YC + +GV PRP+W+ T F G  +     + ASNIIF NG  DPW+GGG+ +N+S +++A+  + GAHH+DLR S  EDP  + +VR+ E  +I +W++
Sbjct:   41 FRENYFEQYMDHFNFESFSNKTFGQRFLVSDKFW--KMGEGPIFFYTGNEGDIWSLANNSGFIVELAAQQEALLVFAEHRYYGKSLPFG----VQSTQRGYTQLLTVEQALADFAVLLQALRHNLGVQDAPTIAFGGSYGGMLSAYMRMKYPHLVAGALAASAPVIAVAGLGNPDQFFRDVTADFYGQSPKCAQAVRDAFQQIKDLFLQ-GAYDTISQNFGTCQSLSSPKDLTQLFGFARNAFTVLAMMDYPYPTNFLGPLPANPVKVGCERL--LSEGQRIMG-LRALAGLVYNSSGMEPCFDIYQMYQSCADPTGCGTGSNARAWDYQACTEINLTFDSNNVTDMFPEIPFSDELRQQYCLDTWGVWPRPDWLQTSFWGGDL-----KAASNIIFSNGDLDPWAGGGIQRNLSTSIIAVTIQGGAHHLDLRASNSEDPPSVVEVRKLEATLIREWVA 484

[Close]

BLAST of Cs6g14090.1 vs. DB:SwissProt
Match: DPP2_HUMAN (Dipeptidyl peptidase 2 OS=Homo sapiens OX=9606 GN=DPP7 PE=1 SV=3)

HSP 1 Score: 333.183 bits (853), Expect = 7.387e-108
Identity = 181/458 (39.52%), Postives = 266/458 (58.08%), Query Frame = 1

Query:  157 YKTKYHTQILDHFNYNPQSYQTFQQRYLINDTHWGGSKNNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSMPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPILNFDNIVSPYSFSNIITQDFRSVSENCYKVIKGSWKQIEETAKKPGGLEKLQKAFRICK---SEKNLA-IESWLSTAFVYTAMTDYPTPSNFLNPLPAFPVKEMCKAIDDPKTGNDVFAKLYGAASVYYNYSGTAKCFDL----NGDSDPHGLS------EWGWQACTEMIMLTGGDNKDSIFEESEEDYDARARYCKEAYGVDPRPNWITTEFGGHKIGLVLKRFASNIIFFNGLRDPWSGGGVLKNISKTVLALVEKEGAHHVDLRFSTKEDPQWLKDVRRREVEIIGKWI 1488
            ++ ++  Q LDHFN+     +TF QR+L++D  W   +   PIF YTGNEGD+  FA N+ F+ ++A +  ALLVF EHRYYGKS+P+G            T  L+  QALAD+A L+  L+++L A D+P + FGGSYGGML+A+ R+KYPH+  GALA+SAP+L    +     F   +T DF   S  C + ++ +++QI++   + G  + ++  F  C+    EK+L  +  +   AF   AM DYP P++FL PLPA PVK  C   D   +       L   A + YN SG+  C+D+    +  +DP G         W +QACTE+ +    +N   +F +     + R RYC + +GV PRP+W+ T F G  +     R ASNIIF NG  DPW+GGG+ +N+S +V+A+  + GAHH+DLR S  EDP  + + R+ E  IIG+W+
Sbjct:   31 FQERFFQQRLDHFNFERFGNKTFPQRFLVSDRFW--VRGEGPIFFYTGNEGDVWAFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQS----TQRGHTELLTVEQALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAVAGLGDSNQFFRDVTADFEGQSPKCTQGVREAFRQIKDLFLQ-GAYDTVRWEFGTCQPLSDEKDLTQLFMFARNAFTVLAMMDYPYPTDFLGPLPANPVKVGC---DRLLSEAQRITGLRALAGLVYNASGSEHCYDIYRLYHSCADPTGCGTGPDARAWDYQACTEINLTFASNNVTDMFPDLPFTDELRQRYCLDTWGVWPRPDWLLTSFWGGDL-----RAASNIIFSNGNLDPWAGGGIRRNLSASVIAVTIQGGAHHLDLRASHPEDPASVVEARKLEATIIGEWV 473

[Close]

BLAST of Cs6g14090.1 vs. DB:SwissProt
Match: DPP2_MOUSE (Dipeptidyl peptidase 2 OS=Mus musculus OX=10090 GN=Dpp7 PE=1 SV=2)

HSP 1 Score: 313.923 bits (803), Expect = 3.467e-100
Identity = 181/459 (39.43%), Postives = 267/459 (58.17%), Query Frame = 1

Query:  157 YKTKYHTQILDHFNYNPQSYQTFQQRYLINDTHWGGSKNNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSMPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPILNFDNIVSPYSFSNIITQDFRSVSENCYKVIKGSWKQIEETAKKPGGLEKLQKAFRICK---SEKNLA-IESWLSTAFVYTAMTDYPTPSNFLNPLPAFPVKEMCKAIDDPKTGNDVFAKLYGAASVYYNYSGTAKCFDL----NGDSDPHGLS------EWGWQACTEMIMLTGGDNKDSIFEESEEDYDARARYCKEAYGVDPRPNWITTEFGGHKIGLVLKRFASNIIFFNGLRDPWSGGGVLKNISKTVLALVEKEGAHHVDLRFSTKEDPQWLKDVRRREVEIIGKWIS 1491
            +   Y  Q +DHFN+     +TF QR+L++D  W       PIF YTGNEGDI  FA N+GFM ++A + +ALLVF EHRYYGKS+P+G    +       T  L+  QALAD+A L+  L+++L   D+P + FGGSYGGML+A+ R+KYPH+  GALA+SAP++    +   Y F   +T DF   S  C + ++ +++QI++   + G  + + + F  C+   S K+L  +  +   AF   AM DYP P++FL PLPA PVK  C+ + +   G  +   L   A + YN SGT  C+D+       +DP G         W +QACTE+ +    +N   +F E     + R +YC + +GV PR +W+ T F G  +     + ASNIIF NG  DPW+GGG+  N+S +V+A+  + GAHH+DLR S  EDP  + +VR+ E  +I +W++
Sbjct:   41 FHENYFEQYMDHFNFESFGNKTFGQRFLVSDKFW--KMGEGPIFFYTGNEGDIWSFANNSGFMVELAAQQEALLVFAEHRYYGKSLPFG----VQSTQRGYTQLLTVEQALADFAVLLQALRQDLGVHDAPTIAFGGSYGGMLSAYMRMKYPHLVAGALAASAPVVAVAGLGDSYQFFRDVTADFYGQSPKCAQAVRDAFQQIKDLFLQ-GAYDTISQNFGTCQSLSSPKDLTQLFGFARNAFTVLAMMDYPYPTDFLGPLPANPVKVGCQRLLN--EGQRIMG-LRALAGLVYNSSGTEPCYDIYRLYQSCADPTGCGTGSDARAWDYQACTEINLTFDSNNVTDMFPEIPFSEELRQQYCLDTWGVWPRQDWLQTSFWGGDL-----KAASNIIFSNGDLDPWAGGGIQSNLSTSVIAVTIQGGAHHLDLRASNSEDPPSVVEVRKLESTLIREWVA 484

[Close]

BLAST of Cs6g14090.1 vs. DB:SwissProt
Match: PCP5_CAEEL (Prolyl carboxy peptidase like protein 5 OS=Caenorhabditis elegans OX=6239 GN=pcp-5 PE=1 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 1.493e-86
Identity = 171/449 (38.08%), Postives = 252/449 (56.12%), Query Frame = 1

Query:  223 FQQRYLINDTHWGGSKNNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSMPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLT---ATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPILNF-DNIVSPYSFSNIITQDFRSVSENCYKVIKGSWKQIEETAKKPGGLEKLQKAFRI-----CKSEKNLA-IESWLSTAFVYTAMTDYPTPSNFLNPLPAFPVKEMCKAIDDP-KTGNDVFAKLYGAASVYYNYSG--------TAKCFDLNGD-SDPHGLSEWGWQACTEMIMLTGGDN--KDSIFEESEEDYDARARYCKEAY-GVDPRPNWITTEFGGHKIGLVLKRFASNIIFFNGLRDPWSGGGV--LKNISKTVLALVEKEGAHHVDLRFSTKEDPQWLKDVRRREVEIIGKWISQ 1494
            F  RY +N  H+   +   PI  YTGNEG +E FA+NTGFM+D+AP+ KA +VF+EHR+YGKS P+   K  +Y +    GYLSS QALAD+A L +   KN     A  S V+ FGGSYGGML+AWFR+KYPH+  GA+A+SAP+  F D+ +    +  I+T+ F     N  K I+  W  ++E AK   G + L   +++      +++ ++  ++ ++  +    AM +YP P++FL+ LPA+PVKE CK+   P KT  +   +LY   ++YYNY+G         AKC    G   DP G   W +Q CTEM+M   G     D  +++     +  A +C + +  +      +    GG   G      ASNI+F NG  DPWSGGG      +  +V++++ K+GAHH DLR +  +D + +K VR  E + I KWI +
Sbjct:   61 FDLRYFLNIDHY---ETGGPILFYTGNEGSLEAFAENTGFMWDLAPELKAAVVFVEHRFYGKSQPF---KNESYTDIRHLGYLSSQQALADFA-LSVQFFKNEKIKGAQKSAVIAFGGSYGGMLSAWFRIKYPHIVDGAIAASAPVFWFTDSNIPEDVYDFIVTRAFLDAGCN-RKAIEKGWIALDELAKSDSGRQYLNVLYKLDPKSKLENKDDIGFLKQYIRESMEAMAMVNYPYPTSFLSSLPAWPVKEACKSASQPGKTQEESAEQLYKIVNLYYNYTGDKSTHCANAAKCDSAYGSLGDPLG---WPFQTCTEMVMPLCGSGYPNDFFWKDCPFTSEKYAEFCMQTFSSIHYNKTLLRPLAGGLAFGATSLPSASNIVFSNGYLDPWSGGGYDHSDKVQGSVISVILKQGAHHYDLRGAHPQDTEEVKKVRAMETQAIKKWIKE 498

[Close]

BLAST of Cs6g14090.1 vs. DB:SwissProt
Match: PCP1_CAEEL (Putative serine protease pcp-1 OS=Caenorhabditis elegans OX=6239 GN=pcp-1 PE=1 SV=2)

HSP 1 Score: 236.113 bits (601), Expect = 1.044e-69
Identity = 161/484 (33.26%), Postives = 239/484 (49.38%), Query Frame = 1

Query:  169 YHTQILDHFNYNPQSYQTFQQRYLINDTHWGGSKNNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSMPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNLTA------TDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAPILNFD-NIVSPYSFSNIITQDFRSVSENCYK-VIKGSWKQIEETAKKPGGLE--------KLQKAFRICKSEKNLAIESWLSTAFVYTAMTDYPTPSNFLNPLPAFPVKEMCKAIDDPKTG---NDVFAKLYGAASVYYNYSGTAK---CFDLN---------GDSDPHGLSEWGWQACTEMI--MLTGGDNKDSIFEESEED-YDARARYCKEAY---GVDPRPNW----ITTEFGGHKIGLVLKRFASNIIFFNGLRDPWSGGGV---LKNISKTVLALVEKEGAHHVDLRFSTKEDPQWLKDVRRREVEIIGKWI 1488
            Y    LDHF +     +TF  R + N+T +   K   PIF YTGNEG +E F   TG M+D+AP F A ++F EHR+YG++ P+G     +Y + +  GYL+S QALADYA L+ +LK++           + V+ FGGSYGGML+AWFR KYPH+  GA A SAP++  +   V P +F +I ++ +  +   C + ++  +W      +    G +        KL    +I        + ++L  A  Y AM DYP P+ FL PLPA+PV   C  ++   T     D+   +  AA++YYNY+       C D +            D  G   W WQ C+E+I  M   G + D  + E  +D Y    + C   +   G  P+ NW    + T +G    G      +SN+I   G  DPWSGGG      N ++ +  L     AHH+DLR     DP  + + R + ++I+  W+
Sbjct:   46 YKNMKLDHFTWGDT--RTFDMRVMWNNTFY---KPGGPIFFYTGNEGGLESFVTATGMMFDLAPMFNASIIFAEHRFYGQTQPFGNQ---SYASLANVGYLTSEQALADYAELLTELKRDNNQFKMTFPAATQVISFGGSYGGMLSAWFRQKYPHIVKGAWAGSAPLIYMNGGGVDPGAFDHITSRTY--IDNGCNRFILANAWNATLNLSSTDAGRQWLNNNTVFKLDPRTKIRNQTDGWNLNAYLREAIEYMAMVDYPYPTGFLEPLPAWPVTVACGYMNANGTSFSDKDLVKAVANAANIYYNYNRDPNFTYCIDFSICGDQGTGGLGGDELG---WPWQECSEIIMAMCASGGSNDVFWNECGKDIYQTLQQGCVSIFKSMGWTPK-NWNIDAVKTLYGYDLSG------SSNLILTQGHLDPWSGGGYKVDQNNAARGIYVLEIPGSAHHLDLRQPNTCDPNTVTNARFQIIQILKCWV 509

[Close]

BLAST of Cs6g14090.1 vs. DB:SwissProt
Match: TSSP_HUMAN (Thymus-specific serine protease OS=Homo sapiens OX=9606 GN=PRSS16 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 1.077e-33
Identity = 114/452 (25.22%), Postives = 201/452 (44.47%), Query Frame = 1

Query:  154 LYKTKYHTQILDHFNYNPQSYQTFQQRYLINDTHWGGSKNNAPIFVYTGNEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSMPYGGNKEIAYKNASTTGYLSSTQALADYASLIIDLKKNL-TATDSPVVVFGGSYGGMLAAWFRLKYPHVAIGALASSAP---ILNFDNIVSPYSFSNIITQDFRSV----SENCYKVIKGSWKQIEETAKKPGGLE-KLQKAFRIC--------KSEKNLAIESWLSTAFVYTAMTDYPTPSNFLNPLPAFPVKEMCKAIDDP---KTGNDVFAKLYGAASVYYNYSGTAKCFDLN--------GDSDPH----GLSEWGWQACTEMIMLTGGDNKDSIFEESEEDYDARARYCKEAYG-----VDPRPNWITTEFGGHKIGLVLKRFASNIIFFNGLRDPWSGGGVLKNISKTVLALVEKEGAH 1398
            L K  +  Q+LD FN + +  ++F QRY +ND HW G   + PIF++ G EG +   +   G    +AP + AL++ +EHR+YG S+P GG +    +      +LSS  ALAD  S  + L +    ++ SP + FGGSY G LAAW RLK+PH+   ++ASSAP   +L+F        +++++++   S     S  C   +  ++ ++E   +  G  +  L+     C        ++E   A+++ +     Y   T  P             V+++C  +      ++ +  +  L  A  +  +  G  KC   +          ++P     G  +W +Q CTE       +N    F +      ++   C++ +G     V        + +GG   G      A+ ++F NG  DPW    V + +  +   L+ + G+H
Sbjct:   56 LPKVGWLEQLLDPFNVSDR--RSFLQRYWVNDQHWVG--QDGPIFLHLGGEGSLGPGSVMRGHPAALAPAWGALVISLEHRFYGLSIPAGGLEMAQLR------FLSSRLALADVVSARLALSRLFNISSSSPWICFGGSYAGSLAAWARLKFPHLIFASVASSAPVRAVLDFSE------YNDVVSRSLMSTAIGGSLECRAAVSVAFAEVERRLRSGGAAQAALRTELSACGPLGRAENQAELLGALQALVGGVVQYDGQTGAP-----------LSVRQLCGLLLGGGGNRSHSTPYCGLRRAVQIVLHSLGQ-KCLSFSRAETVAQLRSTEPQLSGVGDRQWLYQTCTEFGFYVTCENPRCPFSQLPA-LPSQLDLCEQVFGLSALSVAQAVAQTNSYYGGQTPG------ANKVLFVNGDTDPWHVLSVTQALGSSESTLLIRTGSH 472

The following BLAST results are available for this feature:

BLAST of Cs6g14090.1 vs. DB:SwissProt

BLAST of Cs6g14090.1 vs. DB:SwissProt
Analysis Date: 2018-06-07 (C. sinensis v2.0, HZAU CDS)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
PCP_BOVIN	1.909e-129	44.76	Lysosomal Pro-X carboxypeptidase OS=Bos taurus OX=...	[more]
PCP_PONAB	7.852e-128	43.39	Lysosomal Pro-X carboxypeptidase OS=Pongo abelii O...	[more]
PCP_MOUSE	7.885e-128	43.33	Lysosomal Pro-X carboxypeptidase OS=Mus musculus O...	[more]
PCP_HUMAN	1.211e-127	43.39	Lysosomal Pro-X carboxypeptidase OS=Homo sapiens O...	[more]
DPP2_RAT	9.356e-109	39.65	Dipeptidyl peptidase 2 OS=Rattus norvegicus OX=101...	[more]
DPP2_HUMAN	7.387e-108	39.52	Dipeptidyl peptidase 2 OS=Homo sapiens OX=9606 GN=...	[more]
DPP2_MOUSE	3.467e-100	39.43	Dipeptidyl peptidase 2 OS=Mus musculus OX=10090 GN...	[more]
PCP5_CAEEL	1.493e-86	38.08	Prolyl carboxy peptidase like protein 5 OS=Caenorh...	[more]
PCP1_CAEEL	1.044e-69	33.26	Putative serine protease pcp-1 OS=Caenorhabditis e...	[more]
TSSP_HUMAN	1.077e-33	25.22	Thymus-specific serine protease OS=Homo sapiens OX...	[more]

InterPro

Analysis Name: C. sinensis v2.0 peptides
Date Performed: 2018-06-21

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008758	Peptidase S28	PFAM	PF05577	Peptidase_S28	coord: 60..486 e-value: 7.5E-84 score: 281.9
None	No IPR available	GENE3D	1.20.120.980		coord: 377..390 e-value: 2.1E-158 score: 530.0 coord: 225..355 e-value: 2.1E-158 score: 530.0
None	No IPR available	PANTHER	PTHR11010:SF48	SUBFAMILY NOT NAMED	coord: 13..504
None	No IPR available	PANTHER	PTHR11010	PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED	coord: 13..504
IPR029058	Alpha/Beta hydrolase fold	GENE3D	3.40.50.1820		coord: 356..376 e-value: 2.1E-158 score: 530.0 coord: 391..496 e-value: 2.1E-158 score: 530.0 coord: 57..224 e-value: 2.1E-158 score: 530.0
IPR029058	Alpha/Beta hydrolase fold	SUPERFAMILY	53474	alpha/beta-Hydrolases	coord: 126..470

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
protein sequence
mRNA from alignment at chr6:15435929..15440640+
coding sequence from alignment at chr6:15435929..15440640+

mRNA sequence

>Cs6g14090.1_Hzau_Valencia_v1.0 ID=Cs6g14090.1_Hzau_Valencia_v1.0; Name=Cs6g14090.1; organism=Citrus sinensis; type=mRNA; length=1733bp
ACTGAACTGTTTCTCCAAGGGCTCAAGAGTTATAGAACCCAGAAAAAAGA
GCAAAAAAAGAAAAATCAACAATGGCGACTCGGTTCATCTTTCTGTCATT
TTGTCTCCTATTTTCTTCAACTTTGACCATCTCAAATGCCAAAATTTTCC
CAACATTTCCTTCTTCAAGAATCACCCCAGAGAAACTCTCATCTCTTATT
TCAAGTTCCAAAGATAGCCAGGGCTTGTACAAAACAAAGTATCACACTCA
GATTCTCGATCACTTCAATTACAATCCTCAGAGCTATCAGACTTTCCAAC
AAAGATACTTAATCAATGATACTCACTGGGGTGGCTCCAAAAATAATGCT
CCAATTTTTGTTTACACTGGAAACGAAGGTGACATCGAATGGTTTGCTCA
AAACACTGGGTTCATGTATGATGTGGCTCCAAAGTTCAAGGCCCTTCTTG
TTTTCATTGAGCATAGGTATTATGGGAAGTCCATGCCATATGGAGGTAAC
AAAGAGATTGCTTATAAAAATGCAAGCACAACTGGATATTTGAGCTCAAC
CCAAGCATTGGCTGATTATGCTTCTTTGATCATTGATCTCAAGAAGAATT
TGACTGCAACCGATTCCCCAGTTGTTGTTTTTGGAGGTTCCTATGGAGGA
ATGCTGGCAGCTTGGTTTAGGTTAAAATACCCACATGTCGCCATTGGAGC
CTTGGCATCTTCTGCTCCAATCCTCAATTTCGACAATATAGTATCTCCAT
ATAGCTTTAGTAACATTATAACTCAAGACTTCAGGAGTGTGAGCGAGAAT
TGTTACAAAGTGATCAAAGGGTCCTGGAAACAGATTGAAGAGACTGCGAA
AAAACCCGGGGGTCTTGAAAAACTCCAGAAAGCATTTAGAATATGCAAAT
CAGAGAAAAATTTGGCCATCGAAAGCTGGCTTTCAACGGCCTTCGTGTAT
ACGGCCATGACGGATTATCCAACTCCTTCAAATTTTCTGAATCCCTTGCC
AGCTTTTCCTGTCAAAGAGATGTGCAAAGCGATTGACGATCCAAAGACTG
GAAACGACGTGTTCGCGAAGTTGTACGGTGCCGCCAGCGTCTACTATAAC
TACAGTGGAACTGCCAAGTGTTTCGATCTAAACGGTGATTCTGATCCTCA
CGGCCTCAGCGAATGGGGTTGGCAGGCATGTACAGAGATGATAATGCTAA
CGGGTGGTGACAACAAAGATAGCATATTTGAAGAATCTGAAGAGGACTAT
GATGCTAGAGCCAGATATTGCAAGGAAGCCTATGGCGTTGATCCCAGACC
CAATTGGATCACAACAGAATTTGGTGGCCATAAAATTGGGTTAGTCTTGA
AAAGATTTGCGAGCAATATTATCTTCTTCAATGGCCTAAGAGATCCTTGG
AGTGGTGGAGGGGTGTTGAAGAATATTTCAAAGACCGTTCTTGCACTGGT
TGAAAAAGAAGGGGCTCACCATGTAGACCTGAGATTTTCAACAAAAGAAG
ATCCACAATGGCTTAAGGATGTGCGCAGGAGAGAAGTGGAAATCATTGGC
AAGTGGATCTCTCAGTACTTTCAAGACCTAGCCCAGTGAAATTACATGCA
GCTCATAAAGATGACAAATTTTTCCTTTTTTTTTTCTTCTTCTTTAAATT
TAGTCAACTTTCGATAATCTGTTCAAGCCTCAATGCGGTACTGGAGTTAT
GGGATTTGAACTTCACTCAAAAGAGAATTTAAG

protein sequence of Cs6g14090.1

>Cs6g14090.1_Hzau_Valencia_v2.0-protein ID=Cs6g14090.1_Hzau_Valencia_v2.0-protein; Name=Cs6g14090.1; organism=Citrus sinensis; type=polypeptide; length=506bp
MATRFIFLSFCLLFSSTLTISNAKIFPTFPSSRITPEKLSSLISSSKDSQ
GLYKTKYHTQILDHFNYNPQSYQTFQQRYLINDTHWGGSKNNAPIFVYTG
NEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSMPYGGNKEIAYKN
ASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFR
LKYPHVAIGALASSAPILNFDNIVSPYSFSNIITQDFRSVSENCYKVIKG
SWKQIEETAKKPGGLEKLQKAFRICKSEKNLAIESWLSTAFVYTAMTDYP
TPSNFLNPLPAFPVKEMCKAIDDPKTGNDVFAKLYGAASVYYNYSGTAKC
FDLNGDSDPHGLSEWGWQACTEMIMLTGGDNKDSIFEESEEDYDARARYC
KEAYGVDPRPNWITTEFGGHKIGLVLKRFASNIIFFNGLRDPWSGGGVLK
NISKTVLALVEKEGAHHVDLRFSTKEDPQWLKDVRRREVEIIGKWISQYF
QDLAQ*

protein sequence of Cs6g14090.1_Hzau_Valencia_v1.0

>Cs6g14090.1_Hzau_Valencia_v1.0 ID=Cs6g14090.1_Hzau_Valencia_v1.0; Name=Cs6g14090.1_Hzau_Valencia_v1.0; organism=Citrus sinensis; type=polypeptide; length=506bp
MATRFIFLSFCLLFSSTLTISNAKIFPTFPSSRITPEKLSSLISSSKDSQ
GLYKTKYHTQILDHFNYNPQSYQTFQQRYLINDTHWGGSKNNAPIFVYTG
NEGDIEWFAQNTGFMYDVAPKFKALLVFIEHRYYGKSMPYGGNKEIAYKN
ASTTGYLSSTQALADYASLIIDLKKNLTATDSPVVVFGGSYGGMLAAWFR
LKYPHVAIGALASSAPILNFDNIVSPYSFSNIITQDFRSVSENCYKVIKG
SWKQIEETAKKPGGLEKLQKAFRICKSEKNLAIESWLSTAFVYTAMTDYP
TPSNFLNPLPAFPVKEMCKAIDDPKTGNDVFAKLYGAASVYYNYSGTAKC
FDLNGDSDPHGLSEWGWQACTEMIMLTGGDNKDSIFEESEEDYDARARYC
KEAYGVDPRPNWITTEFGGHKIGLVLKRFASNIIFFNGLRDPWSGGGVLK
NISKTVLALVEKEGAHHVDLRFSTKEDPQWLKDVRRREVEIIGKWISQYF
QDLAQ*

mRNA from alignment at chr6:15435929..15440640+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

> ID=; Name=; organism= ; type=; length=4712bp; location=Sequence derived from: chr6:15435929..15440640+ (Citrus sinensis
ACTGAACTGTTTCTCCAAGGGCTCAAGAGTTATAGAACCCAGAAAAAAGA
GCAAAAAAAGAAAAATCAACAATGGCGACTCGGTTCATCTTTCTGTCATT
TTGTCTCCTATTTTCTTCAACTTTGACCATCTCAAATGCCAAAATTTTCC
CAACATTTCCTTCTTCAAGAATCACCCCAGAGAAACTCTCATCTCTTATT
TCAAGTTCCAAAGATAGCCAGGGCTTGTACAAAACAAAGTATCACACTCA
GATTCTCGATCACTTCAATTACAATCCTCAGAGCTATCAGACTTTCCAAC
AAAGATACTTAATCAATGATACTCACTGGGGTGGCTCCAAAAATAATGCT
CCAATTTTTGTTTACACTGGAAACGAAGGTGACATCGAATGGTTTGCTCA
AAACACTGGGTTCATGTATGATGTGGCTCCAAAGTTCAAGGCCCTTCTTG
TTTTCATTGAGGTAAATGATCAAAGAAAAACCCTCTTGCTATTTTCCTTT
TATTTTCTCGGTAAACAAACAGAAACTGATTGTGAAATATGCTAATTGCA
GCATAGGTATTATGGGAAGTCCATGCCATATGGAGGTAACAAAGAGATTG
CTTATAAAAATGCAAGCACAACTGGATATTTGAGCTCAACCCAAGCATTG
GCTGATTATGCTTCTTTGATCATTGATCTCAAGAAGAATTTGACTGCAAC
CGATTCCCCAGTTGTTGTTTTTGGAGGTTCCTATGGAGGAAGTATGATAA
AATAATTAATTTAATTCTTTATTTCTTAGTTGTCTTTTCTATTATTTTCT
CTTCATTGATATCATCACCAATTCACCACGTTATATTAAAATTCTCATCA
CCTGTGAAAGTTAAACACATTTAAAGATGTAGGTTTCAACTAGATAACAA
TGTTTCCTTTACAAATTTTAGCTATAATTTAATATTGTGCACATTATAGT
CGGTCACTATTGTCTGGTACGAAAGTTATATTTTTAAAGATGCAAATGTC
CGTATTAAAAAAATAACTTTAATTTTATCTTTATCATATTTGTATATAAA
TTAAACAACATAAAATATGCGCGATAAAGAAATTTAATTAAGTTTTTTAT
TGGGATTGATTAACAACGAAGTTTATTTGTTTTTGCAGTGCTGGCAGCTT
GGTTTAGGTTAAAATACCCACATGTCGCCATTGGAGCCTTGGCATCTTCT
GCTCCAATCCTCAATTTCGACAATATAGTATCTCCATATAGCTTTAGTAA
CATTATAACTCAAGACTTCAGGGTATATCTTTCTTTCTCTTTCATCAATA
CCAATGCTTTACTTCCTTAGCTGTTCTATATATATACACACAATTATTTA
TTATATAACATAAATAGGACCATATTGAGCCTCATGCAATTAATTAACCC
ATATGCATTCAGCTGCCGGCACTAAATTCCCAAAACAATAATATTAACTA
ACTAATTAAACAATGAATGGTACTGTCGTCAGAAGCAATTAATTCTAAAT
TAGCAATCTCATTTTTTTTAATTAACTTTTGTGCTTGGGAAAAATCAGAG
TGTGAGCGAGAATTGTTACAAAGTGATCAAAGGGTCCTGGAAACAGATTG
AAGAGACTGCGAAAAAACCCGGGGGTCTTGAAAAACTCCAGAAAGCATTT
AGAATATGCAAGTAAGCTCTTGAGTGCTCACTTGTTAATATATCTCAAAC
ACAAATTTGAAGTAATTAATTTAATTGTTTGTTTTTAATACCCTTTTTTT
TGGTATAAATTTTTTTGTTAATTAATTTGGTTGTTGCAGATCAGAGAAAA
ATTTGGCCATCGAAAGCTGGCTTTCAACGGCCTTCGTGTATACGGCCATG
ACGGATTATCCAACTCCTTCAAATTTTCTGAATCCCTTGCCAGCTTTTCC
TGTCAAAGAGGTGCTCGCCTTGCATAATGCATGCTCTTTTAATGTCATTT
TATTGATTAAATTTTGTGATTAATTGCATTGGCCAATCAATGGCCCCAGC
ATAACATTTGCAAGTGCAGGGGTATAATAGTAAATTTTATTAAGTTAATG
ATGGCGTGGATTTGGTTGACCGCAGATGTGCAAAGCGATTGACGATCCAA
AGACTGGAAACGACGTGTTCGCGAAGTTGTACGGTGCCGCCAGCGTCTAC
TATAACTACAGTGGAACTGCCAAGTGTTTCGATCTAAACGGTGATTCTGA
TCCTCACGGCCTCAGCGAATGGGGTTGGCAGGTTAGTGTTATTTGAGTTT
ATATAATATTATATTTCCCTATTTATTAAATCGCTAGTTATCATTAATTT
TATCAATTCATTATCAACCGCCAAGAGTAATAGATTTCTACAACCTAACA
TTTGTCATTAACCCACTTCCTAGATAATATGTTTTTTTCTTTAATCTAAA
TAAGAAGGCATTTATCCATCAAAAGATCTTTTTTTTTTTTTTAATTCTCC
TATCTATTCTTATCTATTAATATGAGAAAGATCAAAGTCCTTATTACTTT
ACATATTAATAAGCTAATAACTAAAGGCTAAATACTAACTTTCCATTGAT
GATGCGATTTTAATTTGTGTCCCTCAACTTTTAGGACGTTGATTCTCTGA
TTTAACTAAAGAACCTCCCGCTATACATTAGTTGTTGGAAAGAATAAAAT
TGCAATAATATTATAATAATATCTCTAACTTAAGTTAATTAGAAATGTAT
AGAATTACTTTCTTGAGTCTTGATCAAGATTTTCTTTTTTTAATAGTGGA
TAGAGAGCCGCCCCGGAGGGGGGTTGGCGGGTGGAGGGAGGGAGTATCCA
AGAAAAGCGTGCATATGTGATGTGATGATTAATCATGATTTTAGCTAAGT
ATTTGGAGCCTTTAAACGTGAAAATCAAATTTCCTATAAAAAAGAGTTTC
AAATAATCATTCGGGTTAGTAGTAGCATGGCCCAGCCATATTTTATTTTT
TTATCAAATTAAACAAAATGTAGTCGGGAAAAGTGCTAAACTTTCACCTA
CTAGAGCCAGCGATATGATGATGATTTATATTTACATTTGGTGTTGGAAA
ACGTTTTCAGAGTGAAAGTGGCAATTTCAAATTTAAATTTGAAATTAAAT
CTAAAATCATAATCTAGAAAGGAAAGATTCATGGGGTATCTGATAAAACG
TGACAAAATGTGTTTTTATTTAATAAGATACAATAACTCAGGAGCTCCAA
TGATAAGTTCATAAAATAATGTAAAATGAGATGATACTACATATTTGAAA
ATTTTTAAAATAAGGAAATAATAATATGTCCGAATTTTTATTATGATTTT
TAAAAAACTTAAGTTATAATATAAATATGATATTATTGCTCATATTACAA
CTCATATTAGATGAGAGTATGATTTATATTTATAAAATAAACTATTACTG
AGTCTAATTGATAAAAGAGAAAACTATCTTTGCTCAATTATACACTATAA
TTAAAGAATGAATGAGGTTCAAACGTAAAGAATGAATGAGATTCAAATTG
CTGCCCTCGTATTTGGAGGGCGGCAGCCTTGACCACTAACTTTTACGTAC
ATTAATTTATAACATTATGGCATGTTGCTACCTAAATAAAGCTCAAGTTA
TCACCTTTTTTATTGTTATTTTTTTCTTTTGGGGCAGGCATGTACAGAGA
TGATAATGCTAACGGGTGGTGACAACAAAGATAGCATATTTGAAGAATCT
GAAGAGGACTATGATGCTAGAGCCAGATATTGCAAGGAAGCCTATGGCGT
TGATCCCAGACCCAATTGGATCACAACAGAATTTGGTGGCCATGTGGGTA
TTCTTATTTTTTATTTTTATATTATCATCATTTTGCTTTTCTTGCTTGAA
CAACCAAATAATGTAACAAGATGATAAGATTTCATGCCGGCTTGTTTAGT
TCTTTTAATAAATTATCGTCTATTTGTTTTTGGACAGAAAATTGGGTTAG
TCTTGAAAAGATTTGCGAGCAATATTATCTTCTTCAATGGCCTAAGAGAT
CCTTGGAGTGGTGGAGGGTATGATCTCTATCCCTTTGCAATGCAAACGTC
TCTTATTGTGGAGAAAATCTTTAGTACTTTCTGCATATGCATTTGCTTCC
ATTAGATTGTTTTTATATGATGAACTTCAGAACAAGAAAAAAAATACGCA
CGTAATCTAAATTTAATGGGCGAGAGTGTGTACACCAAAGGTCTTTTCTT
AGTGTAGTCGTTGGGATTATCTTTTCTATCATTTACATTACCGTTTATGA
ATCTTTCAGGGTGTTGAAGAATATTTCAAAGACCGTTCTTGCACTGGTTG
AAAAAGAAGGTTAGTTCATCAAAATTTCACACAAAAGTGAGAAAAATAAA
AAGAAATAGATGAAATCTATTCATTTATTAGAAAATTAAAAATTAATATG
TAGCCCTAATATTCGTGTGTATTGTGGCAATTTTTATCAGGGGCTCACCA
TGTAGACCTGAGATTTTCAACAAAAGAAGATCCACAATGGCTTAAGGATG
TGCGCAGGAGAGAAGTGGAAATCATTGGCAAGTGGATCTCTCAGTACTTT
CAAGACCTAGCCCAGTGAAATTACATGCAGCTCATAAAGATGACAAATTT
TTCCTTTTTTTTTTCTTCTTCTTTAAATTTAGTCAACTTTCGATAATCTG
TTCAAGCCTCAATGCGGTACTGGAGTTATGGGATTTGAACTTCACTCAAA
AGAGAATTTAAG

Coding sequence (CDS) from alignment at chr6:15435929..15440640+

>Cs6g14090.1_Hzau_Valencia_v1.0 ID=Cs6g14090.1_Hzau_Valencia_v1.0; Name=Cs6g14090.1; organism=Citrus sinensis; type=CDS; length=1518bp; location=Sequence derived from: chr6:15435929..15440640+ (Citrus sinensis
ATGGCGACTCGGTTCATCTTTCTGTCATTTTGTCTCCTATTTTCTTCAAC
TTTGACCATCTCAAATGCCAAAATTTTCCCAACATTTCCTTCTTCAAGAA
TCACCCCAGAGAAACTCTCATCTCTTATTTCAAGTTCCAAAGATAGCCAG
GGCTTGTACAAAACAAAGTATCACACTCAGATTCTCGATCACTTCAATTA
CAATCCTCAGAGCTATCAGACTTTCCAACAAAGATACTTAATCAATGATA
CTCACTGGGGTGGCTCCAAAAATAATGCTCCAATTTTTGTTTACACTGGA
AACGAAGGTGACATCGAATGGTTTGCTCAAAACACTGGGTTCATGTATGA
TGTGGCTCCAAAGTTCAAGGCCCTTCTTGTTTTCATTGAGCATAGGTATT
ATGGGAAGTCCATGCCATATGGAGGTAACAAAGAGATTGCTTATAAAAAT
GCAAGCACAACTGGATATTTGAGCTCAACCCAAGCATTGGCTGATTATGC
TTCTTTGATCATTGATCTCAAGAAGAATTTGACTGCAACCGATTCCCCAG
TTGTTGTTTTTGGAGGTTCCTATGGAGGAATGCTGGCAGCTTGGTTTAGG
TTAAAATACCCACATGTCGCCATTGGAGCCTTGGCATCTTCTGCTCCAAT
CCTCAATTTCGACAATATAGTATCTCCATATAGCTTTAGTAACATTATAA
CTCAAGACTTCAGGAGTGTGAGCGAGAATTGTTACAAAGTGATCAAAGGG
TCCTGGAAACAGATTGAAGAGACTGCGAAAAAACCCGGGGGTCTTGAAAA
ACTCCAGAAAGCATTTAGAATATGCAAATCAGAGAAAAATTTGGCCATCG
AAAGCTGGCTTTCAACGGCCTTCGTGTATACGGCCATGACGGATTATCCA
ACTCCTTCAAATTTTCTGAATCCCTTGCCAGCTTTTCCTGTCAAAGAGAT
GTGCAAAGCGATTGACGATCCAAAGACTGGAAACGACGTGTTCGCGAAGT
TGTACGGTGCCGCCAGCGTCTACTATAACTACAGTGGAACTGCCAAGTGT
TTCGATCTAAACGGTGATTCTGATCCTCACGGCCTCAGCGAATGGGGTTG
GCAGGCATGTACAGAGATGATAATGCTAACGGGTGGTGACAACAAAGATA
GCATATTTGAAGAATCTGAAGAGGACTATGATGCTAGAGCCAGATATTGC
AAGGAAGCCTATGGCGTTGATCCCAGACCCAATTGGATCACAACAGAATT
TGGTGGCCATAAAATTGGGTTAGTCTTGAAAAGATTTGCGAGCAATATTA
TCTTCTTCAATGGCCTAAGAGATCCTTGGAGTGGTGGAGGGGTGTTGAAG
AATATTTCAAAGACCGTTCTTGCACTGGTTGAAAAAGAAGGGGCTCACCA
TGTAGACCTGAGATTTTCAACAAAAGAAGATCCACAATGGCTTAAGGATG
TGCGCAGGAGAGAAGTGGAAATCATTGGCAAGTGGATCTCTCAGTACTTT
CAAGACCTAGCCCAGTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR008758	Peptidase_S28
IPR029058	AB_hydrolase_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0008236	serine-type peptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis