Cs6g18580.2, Cs6g18580.2_Hzau_Valencia_v2.0 (mRNA) Citrus sinensis
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Cs6g18580.2 vs. DB:SwissProt
Match: MPI1_ARATH (Mannose-6-phosphate isomerase 1 OS=Arabidopsis thaliana OX=3702 GN=PMI1 PE=1 SV=1) HSP 1 Score: 427.557 bits (1098), Expect = 4.656e-148 Identity = 215/333 (64.56%), Postives = 256/333 (76.88%), Query Frame = 1 Query: 4 DADSKAARRLTCSVQKYDWGRTGADSLVSKLYGLNSGKRTDIDKPYAEFWMGTHESGPSFLXXXXXXXXXXXXXXXXXXXXXXCGEIVSLKSWILKNPSVLGDKVLHRWGCDLPFLFKVLSVAKALSIQAHPDKELAKTLHKLLPNVYKDDNHKPEMALAITEFEALCSFISLQELKSVLQNVPEIVELVGSEEANRVLHVEMQDGEEKAKFVLQSIFTNLMTASMEMTTKATTKLKSRLHKESQVRPLTEKEQLVLRLEKQYPADIGVIAAFFFNYVKLNPGQALYLGANEPHAYISGECIECMATSDNVVRAGLTPKHRDVQTLCSMLTYK 1002
+AD + RRL CSV+ YDWG+ G+DSLV ++Y NS D +PYAE WMGTHESGPS+L G+ G V+L+SWI +NP LG++VL +WGCDLPFLFKVLSVA+ LSIQAHPDK+LAK +HK PN+YKDDNHKPEMALA T+FEALC FI LQELKSV++ +PEI ELVGSEEAN+V + D EEK K V+++IFT LM+A + T K +KLK RLH ESQ R LT+KE+LVL+LEKQYP DIGVI+AFFFNYVKLNPG+ALYLGANEPHAY+ GEC+E MATSDNVVRAGLT K D+QTLCSML+YK
Sbjct: 14 EADRRRLRRLRCSVKDYDWGKIGSDSLVYRVYAANSDYEIDPTRPYAELWMGTHESGPSYLEDADGSNG------------------VTLRSWITENPKSLGNRVLEKWGCDLPFLFKVLSVARPLSIQAHPDKKLAKKMHKAHPNLYKDDNHKPEMALAYTQFEALCGFIPLQELKSVIRAIPEIEELVGSEEANQVFCITEHD-EEKVKSVVRTIFTLLMSADADTTKKIVSKLKRRLHMESQERQLTDKERLVLKLEKQYPNDIGVISAFFFNYVKLNPGEALYLGANEPHAYLFGECLEVMATSDNVVRAGLTSKPLDIQTLCSMLSYK 327
BLAST of Cs6g18580.2 vs. DB:SwissProt
Match: MPI2_ARATH (Mannose-6-phosphate isomerase 2 OS=Arabidopsis thaliana OX=3702 GN=PMI2 PE=1 SV=1) HSP 1 Score: 412.535 bits (1059), Expect = 6.477e-142 Identity = 199/326 (61.04%), Postives = 253/326 (77.61%), Query Frame = 1 Query: 25 RRLTCSVQKYDWGRTGADSLVSKLYGLNSGKRTDIDKPYAEFWMGTHESGPSFLXXXXXXXXXXXXXXXXXXXXXXCGEIVSLKSWILKNPSVLGDKVLHRWGCDLPFLFKVLSVAKALSIQAHPDKELAKTLHKLLPNVYKDDNHKPEMALAITEFEALCSFISLQELKSVLQNVPEIVELVGSEEANRVLHVEMQDGEEKAKFVLQSIFTNLMTASMEMTTKATTKLKSRLHKESQVRPLTEKEQLVLRLEKQYPADIGVIAAFFFNYVKLNPGQALYLGANEPHAYISGECIECMATSDNVVRAGLTPKHRDVQTLCSMLTYK 1002
+RL C V+ Y+WG+ G +SLV++L N+G+R D + PYAEFWMGTHESGPS + G G C +V+LKSW+L NP++LG KV+ +WGCDLPFLFKVLSV KALSIQAHP+K LA+ LH+ P +Y+D+NHKPE+ALA+T F+ALC F++L+ELK V+ NVPEI ELVGS+ A+++ +V D +E+ K V++ IFT LM+AS T + +++K+RL E++ R L+EKE+LVL LEKQY DIGVI+AFFFNYVKLNPG+ALYL ANEPHAYISG+C+ECMA SDNVVRAGLTPKHRDVQTLCSMLTYK
Sbjct: 23 QRLRCFVKNYEWGKLGPESLVARLQEANTGQRVDSEIPYAEFWMGTHESGPSHVEFGSGHGVSDK-----------C--MVTLKSWVLDNPNLLGSKVVDKWGCDLPFLFKVLSVTKALSIQAHPNKALAEKLHREDPLLYRDNNHKPEIALAVTPFQALCGFVTLKELKEVITNVPEITELVGSKAADQIFNVHEHDEDERIKSVVRLIFTQLMSASNNETKQVVSRMKNRLLLETKHRELSEKEKLVLELEKQYTGDIGVISAFFFNYVKLNPGEALYLDANEPHAYISGDCVECMAASDNVVRAGLTPKHRDVQTLCSMLTYK 335
BLAST of Cs6g18580.2 vs. DB:SwissProt
Match: MPI_SCHPO (Mannose-6-phosphate isomerase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pmi40 PE=3 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 7.223e-83 Identity = 141/330 (42.73%), Postives = 194/330 (58.79%), Query Frame = 1 Query: 28 RLTCSVQKYDWGRTGADSLVSKLYGLNSGKRTDIDKPYAEFWMGTHESGPSFLXXXXXXXXXXXXXXXXXXXXXXCGEIVSLKSWILKNPSVLGDKVLHRWGCDLPFLFKVLSVAKALSIQAHPDKELAKTLHKLLPNVYKDDNHKPEMALAITEFEALCSFISLQELKSVLQNVPEIVELVGSEEANRVLHVEMQDGEEKAKFVLQSIFTNLMTASMEMTTKATTKLKSRLHKESQVRPLTEK-----EQLVLRLEKQYPADIGVIAAFFFNYVKLNPGQALYLGANEPHAYISGECIECMATSDNVVRAGLTPKHRDVQTLCSMLTYK 1002
RL C V+ Y WG+ G +SL +KL G D + PYAE WMG+H SGPSF+ + G+ +S L P +G+KV ++G LPFLFKVLS+ K LSIQAHPDK L K LHK P YKDDNHKPEMA+A+TEF+ALC F +++++ L ++ + E VG EEA R ++ E KA L+++F LM + + T +L ++ TE L++ L Q+P DIG+ F NYV+L+PG+A++L A +PHAY+SG IECMA SDNV+R G TPK +D++TL + LTY+
Sbjct: 3 RLKCDVKSYGWGKVGHESLAAKLAEAGYGFEVDPNTPYAELWMGSHPSGPSFVMQ--------------------TGKPLSE----LLTPETVGEKVYKKYGKQLPFLFKVLSINKVLSIQAHPDKPLGKQLHKTNPKEYKDDNHKPEMAVALTEFDALCGFRPVKQIEQFLDSIAPLREFVG-EEAVRQFKGTVKQDERKA---LETLFNELMHKDEKRIQEFTPQLVQLAKSDANNFGGTEYGGKAFSDLIIHLNSQFPDDIGLFVTPFLNYVRLHPGEAVFLRALDPHAYVSGNIIECMAASDNVIRLGFTPKFKDIETLVNNLTYQ 304
BLAST of Cs6g18580.2 vs. DB:SwissProt
Match: MPI_HUMAN (Mannose-6-phosphate isomerase OS=Homo sapiens OX=9606 GN=MPI PE=1 SV=2) HSP 1 Score: 258.455 bits (659), Expect = 6.255e-82 Identity = 140/327 (42.81%), Postives = 192/327 (58.72%), Query Frame = 1 Query: 31 LTCSVQKYDWGRTGADSLVSKLYGLNSGKRTDI--DKPYAEFWMGTHESGPSFLXXXXXXXXXXXXXXXXXXXXXXCGEIVSLKSWILKNPSVLGDKVLHRWGCDLPFLFKVLSVAKALSIQAHPDKELAKTLHKLLPNVYKDDNHKPEMALAITEFEALCSFISLQELKSVLQNVPEIVELVGSEEANRVLHVEMQDGEEKAKFVLQSIFTNLMTASMEMTTKATTKLKSRLHKESQVRPLTEK--EQLVLRLEKQYPADIGVIAAFFFNYVKLNPGQALYLGANEPHAYISGECIECMATSDNVVRAGLTPKHRDVQTLCSMLTY 999
L+C+VQ+Y WG+ G++S V++L +S I DKPYAE WMGTH G + + + +L WI +N LG KV + +LPFLFKVLSV LSIQAHP+KELA+ LH P Y D NHKPEMA+A+T F+ LC F ++E+ + L+ VPE L+G E A + D + A LQS F++LM + ++ + L R+ +++ E +L+L+L +QYP DIG A +F N + L PG+A++L AN PHAY+ G+C+ECMA SDN VRAGLTPK DV TLC ML+Y
Sbjct: 9 LSCAVQQYAWGKMGSNSEVARLLA-SSDPLAQIAEDKPYAELWMGTHPRGDAKILDNRISQK-------------------TLSQWIAENQDSLGSKVKDTFNGNLPFLFKVLSVETPLSIQAHPNKELAEKLHLQAPQHYPDANHKPEMAIALTPFQGLCGFRPVEEIVTFLKKVPEFQFLIGDEAATHLKQTMSHDSQAVAS-SLQSCFSHLMKSEKKVVVEQLNLLVKRISQQAAAGNNMEDIFGELLLQLHQQYPGDIGCFAIYFLNLLTLKPGEAMFLEANVPHAYLKGDCVECMACSDNTVRAGLTPKFIDVPTLCEMLSY 314
BLAST of Cs6g18580.2 vs. DB:SwissProt
Match: MPI_PANTR (Mannose-6-phosphate isomerase OS=Pan troglodytes OX=9598 GN=MPI PE=2 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 6.602e-82 Identity = 140/327 (42.81%), Postives = 192/327 (58.72%), Query Frame = 1 Query: 31 LTCSVQKYDWGRTGADSLVSKLYGLNSGKRTDI--DKPYAEFWMGTHESGPSFLXXXXXXXXXXXXXXXXXXXXXXCGEIVSLKSWILKNPSVLGDKVLHRWGCDLPFLFKVLSVAKALSIQAHPDKELAKTLHKLLPNVYKDDNHKPEMALAITEFEALCSFISLQELKSVLQNVPEIVELVGSEEANRVLHVEMQDGEEKAKFVLQSIFTNLMTASMEMTTKATTKLKSRLHKESQVRPLTEK--EQLVLRLEKQYPADIGVIAAFFFNYVKLNPGQALYLGANEPHAYISGECIECMATSDNVVRAGLTPKHRDVQTLCSMLTY 999
L+C+VQ+Y WG+ G++S V++L +S I DKPYAE WMGTH G + + + +L WI +N LG KV + +LPFLFKVLSV LSIQAHP+KELA+ LH P Y D NHKPEMA+A+T F+ LC F ++E+ + L+ VPE L+G E A + D + A LQS F++LM + ++ + L R+ +++ E +L+L+L +QYP DIG A +F N + L PG+A++L AN PHAY+ G+C+ECMA SDN VRAGLTPK DV TLC ML+Y
Sbjct: 9 LSCAVQQYAWGKMGSNSEVARLLA-SSDPLAQIAEDKPYAELWMGTHPRGDAKILDNRISQK-------------------TLSQWIAENQDSLGSKVKDTFNGNLPFLFKVLSVETPLSIQAHPNKELAEKLHLQAPQHYPDANHKPEMAIALTPFQGLCGFRPVEEIVTFLKKVPEFQFLIGDEAATHLKQTMSHDSQAVAS-SLQSCFSHLMKSEKKVVVEQLNLLVKRISQQAAAGNNMEDIFGELLLQLHQQYPGDIGCFAIYFLNLLTLKPGEAMFLEANVPHAYLKGDCVECMACSDNTVRAGLTPKFIDVPTLCEMLSY 314
BLAST of Cs6g18580.2 vs. DB:SwissProt
Match: MPI_ECHMU (Probable mannose-6-phosphate isomerase OS=Echinococcus multilocularis OX=6211 GN=PMIH PE=2 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 2.358e-81 Identity = 144/338 (42.60%), Postives = 197/338 (58.28%), Query Frame = 1 Query: 28 RLTCSVQKYDWGRTGADSLVSKL-YGLNSGKRTDIDKPYAEFWMGTHESGPSFLXXXXXXXXXXXXXXXXXXXXXXCGEIVSLKSWILKNPSVLGDKVLHRWGCDLPFLFKVLSVAKALSIQAHPDKELAKTLHKLLPNVYKDDNHKPEMALAITEFEALCSFISLQELKSVLQNVPEIVEL----VGSEEANRVLHVE---------MQDGEEKAKFVLQSIFTNLMTASMEMTTKATTKLKSRLHKESQVRPLTEKEQLVLRLEKQYPADIGVIAAFFFNYVKLNPGQALYLGANEPHAYISGECIECMATSDNVVRAGLTPKHRDVQTLCSMLTY 999
RL C+ Q+YDWG+ G +S+V KL + + +D PYAE WMGTH SG S L V+L + I +NP+ LG L +G LPFLFKVLSVAKALSIQAHPDK++A LH P++YKD +HKPEMA+A+T+FEAL F L ++ + +Q PE+ EL + S E R + M+ EK + ++S+ T S + + L L +E V+ L + L LRL + +P D+G ++ FF NY++L G+A++L AN PHAY+SG+C+ECMA SDNVVRAGLTPK +DV+ L ML Y
Sbjct: 3 RLKCASQRYDWGKVGVNSIVYKLQVASENPDISHVDLPYAELWMGTHPSGSSCLWDNPH---------------------VTLAAHIQENPASLGKPSLIYFGRRLPFLFKVLSVAKALSIQAHPDKKMAVRLHAEQPDLYKDGSHKPEMAIALTDFEALLGFRPLNQILAFIQAFPELAELTTLELPSPEEKRDVQPPSIKQLYSNLMRSSPEKVESTIKSLLNRFTTGSKSVCDPPLSILGVDLQEE-DVQALVD---LFLRLTQAFPGDVGCLSIFFLNYIRLKSGEAIFLKANTPHAYLSGDCVECMANSDNVVRAGLTPKFKDVERLLEMLDY 315
BLAST of Cs6g18580.2 vs. DB:SwissProt
Match: MPI_MACFA (Mannose-6-phosphate isomerase OS=Macaca fascicularis OX=9541 GN=MPI PE=2 SV=3) HSP 1 Score: 256.529 bits (654), Expect = 4.125e-81 Identity = 141/327 (43.12%), Postives = 191/327 (58.41%), Query Frame = 1 Query: 31 LTCSVQKYDWGRTGADSLVSKLYGLNSGKRTDI--DKPYAEFWMGTHESGPSFLXXXXXXXXXXXXXXXXXXXXXXCGEIVSLKSWILKNPSVLGDKVLHRWGCDLPFLFKVLSVAKALSIQAHPDKELAKTLHKLLPNVYKDDNHKPEMALAITEFEALCSFISLQELKSVLQNVPEIVELVGSEEANRVLHVEMQDGEEKAKFVLQSIFTNLMTASMEMTTKATTKLKSRLHKESQVRPLTEK--EQLVLRLEKQYPADIGVIAAFFFNYVKLNPGQALYLGANEPHAYISGECIECMATSDNVVRAGLTPKHRDVQTLCSMLTY 999
L+C+VQ+Y WG+ G +S V++L +S I DKPYAE WMGTH G + + G + +L WI +N LG KV + +LPFLFKVLSV LSIQAHP+KELA+ LH P Y D NHKPEMA+A+T F+ LC F ++E+ + L+ VPE L+G E A + D + A LQS F++LM + ++ + L R+ ++ E +L+L+L +QYP DIG A +F N + L PG+A++L AN PHAY+ G+C+ECMA SDN VRAGLTPK DV TLC ML+Y
Sbjct: 9 LSCAVQQYAWGKMGYNSEVARLLA-SSDPLAQIAEDKPYAELWMGTHPRGDAKIFDNGISQK-------------------TLGQWIAENQDSLGSKVKDTFNGNLPFLFKVLSVETPLSIQAHPNKELAEKLHLQAPQHYPDANHKPEMAIALTPFQGLCGFRPVEEIVTFLKKVPEFQFLIGDEAATHLKQTMSHDSQAVAS-ALQSCFSHLMKSEKKVVAEQLNLLVKRISQQVAAGNNMEDIFGELLLQLHQQYPGDIGCFAIYFLNLLNLKPGEAMFLEANVPHAYLKGDCVECMACSDNTVRAGLTPKFIDVPTLCEMLSY 314
BLAST of Cs6g18580.2 vs. DB:SwissProt
Match: MPI_DICDI (Probable mannose-6-phosphate isomerase OS=Dictyostelium discoideum OX=44689 GN=mpi PE=3 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 1.839e-80 Identity = 145/330 (43.94%), Postives = 198/330 (60.00%), Query Frame = 1 Query: 31 LTCSVQKYDWGRTGADSLVSKLYGLNSGKRTDIDK---PYAEFWMGTHESGPSFLXXXXXXXXXXXXXXXXXXXXXXCGEIVSLKSWILKNPSVLGDKVLHRWGCDLPFLFKVLSVAKALSIQAHPDKELAKTLHKLLPNVYKDDNHKPEMALAITEFEALCSFISLQELKSVLQNVPEIVELVGSEEANRVLHVEMQDGEEKAKFVLQSIFTNLMTASMEMTTKATTKLKSRLHKESQVRPLTEKEQLVLRLEKQYPADIGVIAAFFFNYVKLNPGQALYLGANEPHAYISGECIECMATSDNVVRAGLTPKHRDVQTLCSMLTYKQVR 1011
L C Q Y+WG+ G++S V+KL + + +DI K PYAE WMG H S PS + K + + S S ++ G+ V R+G D PFLFKVLS+ ALSIQAHPD +LA+ L K PN+YKD HKPE+A+A T FEALCSF L E++S + +PE + + +++ D +E L+SI T+L+ A + + +L +RL+ E + + ++LVL+L QYP D+GV A+ NY+ L PG+AL+LGA EPHAYISG+C+ECMA SDNVVRAGLTPK +DV TL MLTY+ R
Sbjct: 24 LKCVSQNYEWGKYGSNSTVAKLLKGYAKECSDIIKETIPYAELWMGDHVSAPSKVEYKNKELKLREYIDTVQKEINEKSSTSSSSSSSIR-----GEIVEKRFGNDFPFLFKVLSIRTALSIQAHPDSQLAQVLFKKYPNIYKDPYHKPEIAIATTPFEALCSFRPLSEIQSFIDTIPEFKNSLPNN------LIKLDDCKE----YLKSIVTSLLKADGLLISNNLKELNNRLN-EKREEERDDLDRLVLKLYSQYPGDVGVFFAYILNYIVLKPGEALFLGAGEPHAYISGDCVECMAPSDNVVRAGLTPKLKDVDTLGDMLTYRTGR 337
BLAST of Cs6g18580.2 vs. DB:SwissProt
Match: MPI_CANGA (Mannose-6-phosphate isomerase OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=PMI1 PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 3.114e-80 Identity = 142/338 (42.01%), Postives = 193/338 (57.10%), Query Frame = 1 Query: 28 RLTCSVQKYDWGRTGADSLVSKLYGLNSGKRTDID--KPYAEFWMGTHESGPSFLXXXXXXXXXXXXXXXXXXXXXXCGEIVSLKSWILKNPS-VLGDKVLHRWGC--DLPFLFKVLSVAKALSIQAHPDKELAKTLHKLLPNVYKDDNHKPEMALAITEFEALCSFISLQELKSVLQNVPEIVELVGSEEANRVLHVEMQDGEEKA-------KFVLQSIFTNLMTASMEMTTKATTKLKSRLHKESQVRPLTEKEQLVLRLEKQYPADIGVI-AAFFFNYVKLNPGQALYLGANEPHAYISGECIECMATSDNVVRAGLTPKHRDVQTLCSMLTYK 1002
RL Q+YDWG+ G+ S V+K + +S ID KPYAE WMGTH PS + +L + KN ++G+ V++++ +LPFLFKVLS+ K LSIQAHPDKEL K LH P Y DDNHKPEMA+AITEFE C F L+E+ L+ +PE ++VG E AN + + G E + K +LQ +F +MTA ++ K + R ++ ++ +LV+RL +Q+P D+G+ N+ KL PGQAL+L A +PHAYI G+ IECMA SDNVVRAG TPK +DV+ L MLTY+
Sbjct: 8 RLDAGYQQYDWGKIGSSSAVAK-FAAHSDPSVKIDETKPYAELWMGTHSKLPSVNHETK----------------------ATLNDILAKNSQELIGEDVINKFKSTNELPFLFKVLSIEKVLSIQAHPDKELGKKLHMEDPKNYPDDNHKPEMAVAITEFEGFCGFKPLEEIADELETIPEFRDVVGDEVANEFIQ-NYKTGVENSSSACANNKKLLQKVFEKVMTAPCDILEKNADGMAKRANENPSSFKSSDLPELVVRLNRQFPKDVGLFCGCLMLNHCKLQPGQALFLEAKDPHAYICGDIIECMAASDNVVRAGFTPKFKDVKNLVEMLTYR 321
BLAST of Cs6g18580.2 vs. DB:SwissProt
Match: MPI_BOVIN (Mannose-6-phosphate isomerase OS=Bos taurus OX=9913 GN=MPI PE=2 SV=3) HSP 1 Score: 253.062 bits (645), Expect = 8.793e-80 Identity = 142/334 (42.51%), Postives = 192/334 (57.49%), Query Frame = 1 Query: 19 AARR---LTCSVQKYDWGRTGADSLVSKLYGLNSGKRTDI--DKPYAEFWMGTHESGPSFLXXXXXXXXXXXXXXXXXXXXXXCGEIVSLKSWILKNPSVLGDKVLHRWGCDLPFLFKVLSVAKALSIQAHPDKELAKTLHKLLPNVYKDDNHKPEMALAITEFEALCSFISLQELKSVLQNVPEIVELVGSEEANRVLHVEMQDGEEKAKFVLQSIFTNLMTASMEMTTKATTKLKSRLHKESQVRPLTEK--EQLVLRLEKQYPADIGVIAAFFFNYVKLNPGQALYLGANEPHAYISGECIECMATSDNVVRAGLTPKHRDVQTLCSMLTY 999
AA+R L+C VQ+Y WG+ G++S V++L +S I D+PYAE WMGTH G + + + +L WI N LG KV + LPFLFKVLSV ALSIQAHP+KELA+ LH P Y D NHKPEMA+A+T F+ LC F ++E+ + L VPE L+G A ++ QD E L+S F++LM + ++ + L R+ ++ E +L+L+L +QYP DIG A +F N + L PG+A++L AN PHAY+ G+C+ECMA SDN VRAGLTPK DV TLC ML+Y
Sbjct: 2 AAQRVFPLSCVVQQYAWGKMGSNSEVARLLA-SSDPLAQISEDRPYAELWMGTHPRGDAKILDNRISQK-------------------TLGQWIADNQDSLGSKVKDTFNGKLPFLFKVLSVETALSIQAHPNKELAEKLHLQAPQHYPDANHKPEMAIALTPFQGLCGFRPVEEIVTFLTKVPEFQFLIGDNAAAQLKQSLSQDSEAVTS-ALRSCFSHLMKSEKKVVVEQLNLLVKRISQQVAAGNNMEDICGELLLQLHQQYPGDIGCFAIYFLNLLTLKPGEAMFLEANVPHAYLKGDCVECMACSDNTVRAGLTPKFIDVPTLCEMLSY 314 The following BLAST results are available for this feature:
BLAST of Cs6g18580.2 vs. DB:SwissProt
Analysis Date: 2018-06-07 (C. sinensis v2.0, HZAU CDS) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: C. sinensis v2.0 peptides
Date Performed: 2018-06-21 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Cs6g18580.2_Hzau_Valencia_v1.0 ID=Cs6g18580.2_Hzau_Valencia_v1.0; Name=Cs6g18580.2; organism=Citrus sinensis; type=mRNA; length=2030bpback to top protein sequence of Cs6g18580.2 >Cs6g18580.2_Hzau_Valencia_v2.0-protein ID=Cs6g18580.2_Hzau_Valencia_v2.0-protein; Name=Cs6g18580.2; organism=Citrus sinensis; type=polypeptide; length=349bpback to top mRNA from alignment at chr6:18643145..18647902+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=4758bp; location=Sequence derived from: chr6:18643145..18647902+ (Citrus sinensisback to top Coding sequence (CDS) from alignment at chr6:18643145..18647902+ >Cs6g18580.2_Hzau_Valencia_v1.0 ID=Cs6g18580.2_Hzau_Valencia_v1.0; Name=Cs6g18580.2; organism=Citrus sinensis; type=CDS; length=1047bp; location=Sequence derived from: chr6:18643145..18647902+ (Citrus sinensisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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