Skip to main content
Toggle navigation
Species
Citrus australasica
Citrus australis
Citrus clementina
Citrus glauca
Citrus ichangensis
Citrus inodora
Citrus limon
Citrus maxima
Citrus medica
Citrus reticulata
Citrus sinensis
Poncirus trifoliata
Atalantia buxifolia
Fortunella hindsii
Ca. Liberibacter asiaticus
Ca. Liberibacter africanus
Ca. Liberibacter americanus
others
Data
Data Overview
Downloads
Data Submission
Marker Types
BIMS and Field Book
Publication Datasets
Trait Abbreviations
Search
Gene and Transcript Search
Genotype Search
Germplasm Search
Map Search
Marker Search
Marker Search by Locus
Publication Search
QTL/GWAS Search
Sequence Search
MegaSearch
Ortholog/Paralog Search
Trait Descriptor Search
Trait Search
Fruit and Nut List
Tools
BIMS
BLAST+
CitrusCyc
Expression Heatmap
JBrowse
MapViewer
Synteny Viewer
General
About CGD
CGD Usage
Disclaimer
Mailing List
CGD Citations
CGD Emails
Conferences
Presentations
Work Completed
Work In Progress
Steering Committee
Newsletter
Help
Contact Us
User Manual
Video Tutorials
Login
MapViewer
Change Map
Short video tutorial
|
Text tutorial
AGI-05 of map Citrus-Okitsu-46-gou/Kankitsu-Ch
ukanbohon-Nou-5-gou-F2-2014
To zoom in, drag the mouse across the linkage group
Map Detail
0
10
20
30
40
50
60
70
80
90
100
cM
Tf0010f
Mf0039f
Cp1598g
Af1149g
Tf0294g
Cp0073g
Cp1556a
Tf0012a
Af1091a
Cp1427a
Ov0126f
Gmom16a
Tf0279g
Al0039a
Fb1567a
6
7
8
9
10
11
12
13
14
15
16
Cp1598g
Mf0039f
Tf0342f
Gmom03f
Tf0152f
CAPS
SNP
STS
Dot Plot
Select Reference Map:
Species
Citrus clementina
Citrus grandis
Citrus limon
Citrus reshni
Citrus reticulata
Citrus sinensis
Citrus spp.
Citrus volkameriana
Poncirus trifoliata
Map
Citrus-20-23/124-10-F1-2012
Citrus-AfinVerna/FlyingDragon-AfinVerna-F1-2002
Citrus-AfinVerna/FlyingDragon-AfinVerna-F1-2003
Citrus-AfinVerna/FlyingDragon-F1-2003
Citrus-AfinVerna/FlyingDragon-FlyingDragon-F1-2003
Citrus-Arizona/FlyingDragon-F1-1996
Citrus-C.sunki_x_Rubidoux-C.sunki-F1-2018
Citrus-C.sunki_x_Rubidoux-Rubidoux- F1-2018
Citrus-C.taiwanica/WebberFawcett//Chandler/Rubidoux//Chandler/WebberFawcett//Tahitian/FlyingDragon//Tahitian/Carrizo//Ruby/FlyingDragon//FlyingDragon/C-35Citrange-F1-1998
Citrus-C.taiwanica/WebberFawcett//Chandler/Rubidoux//Chandler/WebberFawcett//Tahitian/FlyingDragon//Tahitian/Carrizo//Ruby/FlyingDragon//FlyingDragon/C-35Citrange//Sacaton/Troyer//Pomeroy/Pomeroy//FlyingDragon/Flying Dragon-F1-1998
Citrus-Citrus_hassaku/FlyingDragon//Kiyomi//Kankitsu_Chukanbohon_Nou_8_Gou/Siamese_Acidless-BC2-2015
Citrus-Citrus_hassaku/FlyingDragon//Kiyomi//Kankitsu_Chukanbohon_Nou_8_Gou/Siamese_Acidless-BC2-2016
Citrus-Clementine/Trifoliate-HAU21-F1-Maternal
Citrus-Clementine/Trifoliate-HAU21-F1-Paternal
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016
Citrus-Cleopatra/P.trifoliata-P.trifoliata-F1-2016
Citrus-Cleopatra/Trifoliatesp-F2-2012
Citrus- Consensus-ThongDee/Pomeroy//USDA1740-Ambersweet/US119-LB75/USDA1747-LB121/Carrizo-Pummelo/EnglishLargeTrifoliateOrange-Foster/Kryder-1996
Citrus-C_sunki/Rubidoux-F1-Rubidoux-2020
Citrus-C_sunki/Rubidoux-F1-Sunki-2020
Citrus-DPI6.4/Rubidoux-DPI6.4-F1-2003
Citrus-DPI6.4/Rubidoux-Rubidoux-F1-2003
Citrus-Ellendale-2021
Citrus-Fina_Sodea/Byungkyool-F1-Byungkyool
Citrus-Fina_Sodea/Byungkyool-F1-Fina_Sodea
Citrus-FlyingDragon/Flying Dragon-RIL-1996
Citrus-GiantKeyLime-F1
Citrus-Hanayu-F1
Citrus-Harehime/Yoshida-F1-Harehime
Citrus-Harehime/Yoshida-F1-Yoshida
Citrus-HJ/ZK-F1
Citrus-Hyuganatsu/2-11-BC1
Citrus-Li2/Wan2-F1-2015
Citrus-Murcott/Pera//2*Murcott/Pera-Murcott-BC1-2007
Citrus-Murcott/Pera//2*Murcott/Pera-Pera-BC1-2007
Citrus-Murcott_x_Pera-F1
Citrus-Okitsu-46-gou/Kankitsu-Chukanbohon-Nou-5-gou-F2-2014
Citrus-Okitsu46/Okitsu56-F1
Citrus-Orlando/Clementine-F1-Clementine-2010
Citrus-Orlando/Clementine-F1-Orlando-2010
Citrus-Pomeroy/2*ThongDee-BC1-1994
Citrus-Pomeroy/Selection 1740//Duncan/Selection LB121-BC1-1992
Citrus-Pomeroy/USDA17-40-BC1-1992-1
Citrus-Pomeroy/USDA17-40-BC1-1992-2
Citrus-R/Pr-2023
Citrus-Sacaton/Troyer-RIL-1997
Citrus-Sacaton/Troyer//Pomeroy/Pomeroy//FlyingDragon/Flying Dragon-F1-1998
Citrus-Sanford/Argentina-Argentina-F1
Citrus-Sanford/Argentina-F1
Citrus-Sanford/Argentina-Sanford-F1
Citrus-Sunki/Rubidoux-Rubidoux-F1-1999
Citrus-Sunki/Rubidoux-Sunki-F1-1999
Citrus-ThongDee/USDA17-40-BC1-1996
Citrus-USDA1747/Nakon-BC1-2001
Citrus-Volkamer/Rubidoux-F1-1996
Citrus-Volkamer/Rubidoux-Volkamer-F1-2003
Clementine/SweetBloodOrange-F1
mandarin-Mukaku_Kishu_consensus-F1
Poncirus-FlyingDragon/FlyingDragon-RIL-2003
Poncirus/Citrus-SynthesisMap-Ref-F1
Linkage Group
AGI-01
AGI-02
AGI-03
AGI-04
AGI-05
AGI-06
AGI-07
AGI-08
AGI-09
Submit
Select Comparison Map:
(View Correspondence Matrix)
Show comparison map
Download Table
Species
Citrus spp.
Map
Citrus-Citrus_hassaku/FlyingDragon//Kiyomi//Kankitsu_Chukanbohon_Nou_8_Gou/Siamese_Acidless-BC2-2016 (15)
Citrus-Citrus_hassaku/FlyingDragon//Kiyomi//Kankitsu_Chukanbohon_Nou_8_Gou/Siamese_Acidless-BC2-2015 (14)
Citrus-Hyuganatsu/2-11-BC1 (10)
Linkage Group
5 (14)
4 (1)
Submit
Show genome view
Invert scaffold
Download Table
Whole Genome
- None -
Chromosome/Scaffold
- None -
Submit
Display Settings:
Marker color
CAPS
SNP
STS
genetic marker
salmonPink
paleOrange
orange
redBrown
eggBlue
violetPurple
tealGreen
deepGreen
avocadoGreen
medGray
medGray2
black
blue
darkPurple
Submit
Reset
Marker visibility
CAPS
SNP
STS
genetic marker
Show
Hide
Submit
Reset
Show ruler
Show marker position
Expand QTL
Submit
