Skip to main content
Toggle navigation
Species
Citrus australasica
Citrus australis
Citrus clementina
Citrus glauca
Citrus ichangensis
Citrus inodora
Citrus limon
Citrus maxima
Citrus medica
Citrus reticulata
Citrus sinensis
Poncirus trifoliata
Atalantia buxifolia
Fortunella hindsii
Ca. Liberibacter asiaticus
Ca. Liberibacter africanus
Ca. Liberibacter americanus
others
Data
Data Overview
Downloads
Data Submission
Marker Types
BIMS and Field Book
Publication Datasets
Trait Abbreviations
Search
Gene and Transcript Search
Genotype Search
Germplasm Search
Map Search
Marker Search
Marker Search by Locus
Publication Search
QTL/GWAS Search
Sequence Search
MegaSearch
Ortholog/Paralog Search
Trait Descriptor Search
Trait Search
Fruit and Nut List
Tools
BIMS
BLAST+
CitrusCyc
Expression Heatmap
JBrowse
MapViewer
Synteny Viewer
General
About CGD
CGD Usage
Disclaimer
Mailing List
CGD Citations
CGD Emails
Conferences
Presentations
Work Completed
Work In Progress
Steering Committee
Newsletter
Help
Contact Us
User Manual
Video Tutorials
Login
MapViewer
Change Map
Short video tutorial
|
Text tutorial
LG5 of map Citrus-Guanxi/Pingshan-Integrated-F
1-2015-physical
To zoom in, drag the mouse across the linkage group
Map Detail
0
10,000,000
20,000,000
30,000,000
40,000,000
50,000,000
60,000,000
70,000,000
80,000,000
bp
chr5_1104839
chrUn_4904894
chr5_13694440
chr5_15414281
chr5_24999003
chr5_15564233
chr5_17223742
chr5_32387783
chr5_19272885
chrUn_39150325
chr5_25016006
chr5_6546320
chrUn_28744403
chr5_15372220
5,000,000
6,000,000
7,000,000
8,000,000
9,000,000
10,000,000
11,000,000
12,000,000
13,000,000
chr5_13694440
chr5_14155769
chr5_10661406
chr5_10973342
chrUn_74841405
chr5_12273293
chr5_10175326
chr5_12804988
chr5_10534216
chr5_13114051
chr5_13432301
chr5_11279974
chr5_14294539
chr5_8652632
chr5_13884980
chr5_14197637
chr5_13403290
chr5_12973881
chrUn_4885444
CX0029
chrUn_5457922
chrUn_5152350
chrUn_6252095
chrUn_4880252
chrUn_4904894
chrUn_5478001
chrUn_5138582
chrUn_5655380
chrUn_27965857
chrUn_5610431
chr5_3417757
chr5_6241723
chrUn_4986484
chr5_5939301
chrUn_6252134
chrUn_6222097
CX0118
chr5_6916277
chr5_6130089
chrUn_64949388
chr5_7356982
chrUn_74841453
chr5_8430439
chr5_10833078
chr5_8549430
SNP
Dot Plot
Select Reference Map:
Species
Citrus clementina
Citrus grandis
Citrus limon
Citrus reshni
Citrus reticulata
Citrus sinensis
Citrus spp.
Citrus volkameriana
Poncirus trifoliata
Map
Citrus-Chandler-Ref-F1
Citrus-DPI6-4/Rubidoux-DPI6-4-F1-2003
Citrus-Guanxi/Pingshan-Guanxi-F1-2015
Citrus-Guanxi/Pingshan-Guanxi-F1-2015-physical
Citrus-Guanxi/Pingshan-Integrated-F1-2015
Citrus-Guanxi/Pingshan-Integrated-F1-2015-physical
Citrus-Guanxi/Pingshan-Pingshan-F1-2015
Citrus-Guanxi/Pingshan-Pingshan-F1-2015-physical
Citrus-Pink-Ref-F1
Linkage Group
LG1
LG2
LG3
LG4
LG5
LG6
LG7
LG8
LG9
Submit
Select Comparison Map:
(View Correspondence Matrix)
Show comparison map
Download Table
Species
Citrus grandis
Citrus clementina
Citrus spp.
Map
Citrus-Guanxi/Pingshan-Integrated-F1-2015 (261)
Citrus-Guanxi/Pingshan-Guanxi-F1-2015 (256)
Citrus-Guanxi/Pingshan-Guanxi-F1-2015-physical (171)
Citrus-Guanxi/Pingshan-Pingshan-F1-2015 (27)
Citrus-Guanxi/Pingshan-Pingshan-F1-2015-physical (24)
Citrus-Chandler-Ref-F1 (3)
Linkage Group
LG5 (261)
Submit
Show genome view
Invert scaffold
Download Table
Whole Genome
- None -
Chromosome/Scaffold
- None -
Submit
Display Settings:
Marker color
SNP
salmonPink
paleOrange
orange
redBrown
eggBlue
violetPurple
tealGreen
deepGreen
avocadoGreen
medGray
medGray2
black
blue
darkPurple
Submit
Reset
Marker visibility
SNP
Show
Hide
Submit
Reset
Show ruler
Show marker position
Expand QTL
Submit