Skip to main content
Toggle navigation
Species
Citrus australasica
Citrus australis
Citrus clementina
Citrus glauca
Citrus ichangensis
Citrus inodora
Citrus limon
Citrus maxima
Citrus medica
Citrus reticulata
Citrus sinensis
Poncirus trifoliata
Atalantia buxifolia
Fortunella hindsii
Ca. Liberibacter asiaticus
Ca. Liberibacter africanus
Ca. Liberibacter americanus
others
Data
Data Overview
Downloads
Data Submission
Marker Types
BIMS and Field Book
Publication Datasets
Trait Abbreviations
Search
Gene and Transcript Search
Genotype Search
Germplasm Search
Map Search
Marker Search
Marker Search by Locus
Publication Search
QTL/GWAS Search
Sequence Search
MegaSearch
Ortholog/Paralog Search
Trait Descriptor Search
Trait Search
Fruit and Nut List
Tools
BIMS
BLAST+
CitrusCyc
Expression Heatmap
JBrowse
MapViewer
Synteny Viewer
General
About CGD
CGD Usage
Disclaimer
Mailing List
CGD Citations
CGD Emails
Conferences
Presentations
Work Completed
Work In Progress
Steering Committee
Newsletter
Help
Contact Us
User Manual
Video Tutorials
Login
MapViewer
Change Map
Short video tutorial
|
Text tutorial
LG03 of map Citrus-Clementine/Trifoliate-HAU21
-F1-Maternal
To zoom in, drag the mouse across the linkage group
Map Detail
0
50
100
150
200
250
300
350
400
450
500
cM
Marker1409467
Marker1394878
Marker1665953
Markerma6_41
Marker1802425
Marker1732800
Marker1590783
Marker1711355
Marker1434952
85
90
95
100
105
110
115
120
125
130
Marker1780632
Marker1313384
Marker1445701
Marker1454357
Marker1443438
Marker1490715
Marker1517008
Marker1546536
Marker1562937
Marker1462957
Marker1837316
Marker1891341
Marker1432526
Markerma6_17
Marker1425892
Marker1512979
Marker1645165
Marker1666488
Marker1826363
Marker1864052
MarkerL_SSR28
Markerma2_1824
Marker1371379
Marker1533143
Marker1666828
Marker1803781
Markerma6_9
Marker1630914
Marker1884446
Markerma6_26
MarkerL_SSR53
Marker1595654
Marker1446523
Marker1360591
Marker1335915
Marker1715461
Marker1841624
Marker1336257
MarkerL_SSR51
Markerma6_40
Marker1323242
Marker1538499
Marker1575389
Markerc.sin0095
Marker1346188
Marker1426974
Marker1503286
Marker1574685
Marker1589350
Marker1880458
Markerc.sin0230
Markerc.sin0342
Marker1352969
Marker1802425
Marker1605194
Marker1454500
MarkerL_SSR52
MarkerL_SSR17
Marker1587821
Marker1876427
Markerma6_46
Marker1622613
Marker1882056
Marker1336753
Marker1325110
Marker1326881
Marker1376263
Marker1552208
Marker1575365
Marker1627291
Marker1630370
Marker1651553
Marker1668428
Marker1687654
Marker1719133
Marker1721940
Marker1734839
Marker1751297
Marker1772764
Marker1800976
Marker1819542
Marker1874538
Marker1927556
Marker1956296
Marker1967101
Marker1989975
Markerc.sin0368
MarkerL_SSR14
Marker1321346
Marker1839234
Marker1561485
Marker1809071
Marker1695848
Marker1876703
Marker1861124
Marker1958328
Marker1941956
Marker1926734
Marker1700104
Marker1458860
Marker1841831
Marker1481549
Marker1642558
Marker1492995
Marker1450676
Marker1419837
Marker1366305
Marker1907039
Marker1884649
Marker1764503
Marker1757404
Marker1623971
Marker1617828
Marker1549317
Marker1833760
Marker1821309
Marker1818092
Marker1777902
Marker1776249
Marker1742968
Marker1721750
Marker1927595
Marker1914875
Marker1849435
Marker1847351
Marker1831271
Marker1989104
Marker1685280
Marker1683041
Markerc.sin0089
Marker1590459
Marker1518923
Marker1507086
Marker1440590
Marker1435345
Marker1368518
Markerma6_61
Markerc.sin0236
Marker1939882
Marker1938420
Markerma6_41
SLAF
genetic marker
SSR
Indel
Dot Plot
Select Reference Map:
Species
Citrus clementina
Citrus grandis
Citrus limon
Citrus reshni
Citrus reticulata
Citrus sinensis
Citrus spp.
Citrus volkameriana
Poncirus trifoliata
Map
Citrus-20-23/124-10-F1-2012
Citrus-AfinVerna/FlyingDragon-AfinVerna-F1-2002
Citrus-AfinVerna/FlyingDragon-AfinVerna-F1-2003
Citrus-AfinVerna/FlyingDragon-F1-2003
Citrus-AfinVerna/FlyingDragon-FlyingDragon-F1-2003
Citrus-Arizona/FlyingDragon-F1-1996
Citrus-C.sunki_x_Rubidoux-C.sunki-F1-2018
Citrus-C.sunki_x_Rubidoux-Rubidoux- F1-2018
Citrus-C.taiwanica/WebberFawcett//Chandler/Rubidoux//Chandler/WebberFawcett//Tahitian/FlyingDragon//Tahitian/Carrizo//Ruby/FlyingDragon//FlyingDragon/C-35Citrange-F1-1998
Citrus-C.taiwanica/WebberFawcett//Chandler/Rubidoux//Chandler/WebberFawcett//Tahitian/FlyingDragon//Tahitian/Carrizo//Ruby/FlyingDragon//FlyingDragon/C-35Citrange//Sacaton/Troyer//Pomeroy/Pomeroy//FlyingDragon/Flying Dragon-F1-1998
Citrus-Citrus_hassaku/FlyingDragon//Kiyomi//Kankitsu_Chukanbohon_Nou_8_Gou/Siamese_Acidless-BC2-2015
Citrus-Citrus_hassaku/FlyingDragon//Kiyomi//Kankitsu_Chukanbohon_Nou_8_Gou/Siamese_Acidless-BC2-2016
Citrus-Clementine/Trifoliate-HAU21-F1-Maternal
Citrus-Clementine/Trifoliate-HAU21-F1-Paternal
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016
Citrus-Cleopatra/P.trifoliata-P.trifoliata-F1-2016
Citrus-Cleopatra/Trifoliatesp-F2-2012
Citrus- Consensus-ThongDee/Pomeroy//USDA1740-Ambersweet/US119-LB75/USDA1747-LB121/Carrizo-Pummelo/EnglishLargeTrifoliateOrange-Foster/Kryder-1996
Citrus-C_sunki/Rubidoux-F1-Rubidoux-2020
Citrus-C_sunki/Rubidoux-F1-Sunki-2020
Citrus-DPI6.4/Rubidoux-DPI6.4-F1-2003
Citrus-DPI6.4/Rubidoux-Rubidoux-F1-2003
Citrus-Ellendale-2021
Citrus-Fina_Sodea/Byungkyool-F1-Byungkyool
Citrus-Fina_Sodea/Byungkyool-F1-Fina_Sodea
Citrus-FlyingDragon/Flying Dragon-RIL-1996
Citrus-GiantKeyLime-F1
Citrus-Hanayu-F1
Citrus-Harehime/Yoshida-F1-Harehime
Citrus-Harehime/Yoshida-F1-Yoshida
Citrus-HJ/ZK-F1
Citrus-Hyuganatsu/2-11-BC1
Citrus-Li2/Wan2-F1-2015
Citrus-Murcott/Pera//2*Murcott/Pera-Murcott-BC1-2007
Citrus-Murcott/Pera//2*Murcott/Pera-Pera-BC1-2007
Citrus-Murcott_x_Pera-F1
Citrus-Okitsu-46-gou/Kankitsu-Chukanbohon-Nou-5-gou-F2-2014
Citrus-Okitsu46/Okitsu56-F1
Citrus-Orlando/Clementine-F1-Clementine-2010
Citrus-Orlando/Clementine-F1-Orlando-2010
Citrus-Pomeroy/2*ThongDee-BC1-1994
Citrus-Pomeroy/Selection 1740//Duncan/Selection LB121-BC1-1992
Citrus-Pomeroy/USDA17-40-BC1-1992-1
Citrus-Pomeroy/USDA17-40-BC1-1992-2
Citrus-R/Pr-2023
Citrus-Sacaton/Troyer-RIL-1997
Citrus-Sacaton/Troyer//Pomeroy/Pomeroy//FlyingDragon/Flying Dragon-F1-1998
Citrus-Sanford/Argentina-Argentina-F1
Citrus-Sanford/Argentina-F1
Citrus-Sanford/Argentina-Sanford-F1
Citrus-Sunki/Rubidoux-Rubidoux-F1-1999
Citrus-Sunki/Rubidoux-Sunki-F1-1999
Citrus-ThongDee/USDA17-40-BC1-1996
Citrus-USDA1747/Nakon-BC1-2001
Citrus-Volkamer/Rubidoux-F1-1996
Citrus-Volkamer/Rubidoux-Volkamer-F1-2003
Clementine/SweetBloodOrange-F1
mandarin-Mukaku_Kishu_consensus-F1
Poncirus-FlyingDragon/FlyingDragon-RIL-2003
Poncirus/Citrus-SynthesisMap-Ref-F1
Linkage Group
LG01
LG02
LG03
LG04
LG05
LG06
LG07
LG08
LG09
Submit
Select Comparison Map:
(View Correspondence Matrix)
Show comparison map
Download Table
Species
Citrus spp.
Map
Citrus-Clementine/Trifoliate-HAU21-F1-Paternal (149)
Citrus-Li2/Wan2-F1-2015 (1)
Linkage Group
LG03 (149)
Submit
Show genome view
Invert scaffold
Download Table
Whole Genome
- None -
Chromosome/Scaffold
- None -
Submit
Display Settings:
Marker color
SLAF
genetic marker
SSR
Indel
salmonPink
paleOrange
orange
redBrown
eggBlue
violetPurple
tealGreen
deepGreen
avocadoGreen
medGray
medGray2
black
blue
darkPurple
Submit
Reset
Marker visibility
SLAF
genetic marker
SSR
Indel
Show
Hide
Submit
Reset
Show ruler
Show marker position
Expand QTL
Submit
