Skip to main content
Toggle navigation
Species
Citrus australasica
Citrus australis
Citrus clementina
Citrus glauca
Citrus ichangensis
Citrus inodora
Citrus limon
Citrus maxima
Citrus medica
Citrus reticulata
Citrus sinensis
Poncirus trifoliata
Atalantia buxifolia
Fortunella hindsii
Ca. Liberibacter asiaticus
Ca. Liberibacter africanus
Ca. Liberibacter americanus
others
Data
Data Overview
Downloads
Data Submission
Marker Types
BIMS and Field Book
Publication Datasets
Trait Abbreviations
Search
Gene and Transcript Search
Genotype Search
Germplasm Search
Map Search
Marker Search
Marker Search by Locus
Publication Search
QTL/GWAS Search
Sequence Search
MegaSearch
Ortholog/Paralog Search
Trait Descriptor Search
Trait Search
Fruit and Nut List
Tools
BIMS
BLAST+
CitrusCyc
Expression Heatmap
JBrowse
MapViewer
Synteny Viewer
General
About CGD
CGD Usage
Disclaimer
Mailing List
CGD Citations
CGD Emails
Conferences
Presentations
Work Completed
Work In Progress
Steering Committee
Newsletter
Help
Contact Us
User Manual
Video Tutorials
Login
MapViewer
Change Map
Short video tutorial
|
Text tutorial
LG01 of map Citrus-Clementine/Trifoliate-HAU21
-F1-Paternal
To zoom in, drag the mouse across the linkage group
Map Detail
0
20
40
60
80
100
120
140
160
180
cM
Marker3715912
Marker4056577
Marker4095162
Marker3897773
Marker4017143
Marker3964553
Marker4032563
Marker3887735
Marker4006918
Marker3730123
Marker4091748
Marker3685422
Marker3881406
Marker3750655
Marker3803969
Marker3954748
160
162
164
166
168
170
172
174
176
178
Marker3750655
Marker4031617
Marker3910426
Marker3721730
Marker3743095
Marker3691695
Marker3740451
Marker3925048
Marker3847683
Marker3775595
Marker3866162
Marker3918762
Marker3916321
Marker3907439
Marker3906129
Marker3693605
MarkerL_SSR56
Marker3797112
Marker3945710
Marker3902419
Marker3770257
Marker3698459
Marker3737872
Marker4059824
Marker3803969
Marker4009830
Marker4079896
Marker3905071
Marker3924358
Marker4050718
Marker3840334
Marker3770445
Marker3758254
Marker3739340
Marker4083901
Marker4013672
Marker3883882
Marker3792834
Marker3953892
Marker3813847
Marker3794394
Marker3937769
Marker3720522
Marker3711965
Marker3951326
Marker3921830
Marker3905568
Marker3757216
Marker3986042
SLAF
SSR
genetic marker
Dot Plot
Select Reference Map:
Species
Citrus clementina
Citrus grandis
Citrus limon
Citrus reshni
Citrus reticulata
Citrus sinensis
Citrus spp.
Citrus volkameriana
Poncirus trifoliata
Map
Citrus-20-23/124-10-F1-2012
Citrus-AfinVerna/FlyingDragon-AfinVerna-F1-2002
Citrus-AfinVerna/FlyingDragon-AfinVerna-F1-2003
Citrus-AfinVerna/FlyingDragon-F1-2003
Citrus-AfinVerna/FlyingDragon-FlyingDragon-F1-2003
Citrus-Arizona/FlyingDragon-F1-1996
Citrus-C.sunki_x_Rubidoux-C.sunki-F1-2018
Citrus-C.sunki_x_Rubidoux-Rubidoux- F1-2018
Citrus-C.taiwanica/WebberFawcett//Chandler/Rubidoux//Chandler/WebberFawcett//Tahitian/FlyingDragon//Tahitian/Carrizo//Ruby/FlyingDragon//FlyingDragon/C-35Citrange-F1-1998
Citrus-C.taiwanica/WebberFawcett//Chandler/Rubidoux//Chandler/WebberFawcett//Tahitian/FlyingDragon//Tahitian/Carrizo//Ruby/FlyingDragon//FlyingDragon/C-35Citrange//Sacaton/Troyer//Pomeroy/Pomeroy//FlyingDragon/Flying Dragon-F1-1998
Citrus-Citrus_hassaku/FlyingDragon//Kiyomi//Kankitsu_Chukanbohon_Nou_8_Gou/Siamese_Acidless-BC2-2015
Citrus-Citrus_hassaku/FlyingDragon//Kiyomi//Kankitsu_Chukanbohon_Nou_8_Gou/Siamese_Acidless-BC2-2016
Citrus-Clementine/Trifoliate-HAU21-F1-Maternal
Citrus-Clementine/Trifoliate-HAU21-F1-Paternal
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016
Citrus-Cleopatra/P.trifoliata-P.trifoliata-F1-2016
Citrus-Cleopatra/Trifoliatesp-F2-2012
Citrus- Consensus-ThongDee/Pomeroy//USDA1740-Ambersweet/US119-LB75/USDA1747-LB121/Carrizo-Pummelo/EnglishLargeTrifoliateOrange-Foster/Kryder-1996
Citrus-C_sunki/Rubidoux-F1-Rubidoux-2020
Citrus-C_sunki/Rubidoux-F1-Sunki-2020
Citrus-DPI6.4/Rubidoux-DPI6.4-F1-2003
Citrus-DPI6.4/Rubidoux-Rubidoux-F1-2003
Citrus-Ellendale-2021
Citrus-Fina_Sodea/Byungkyool-F1-Byungkyool
Citrus-Fina_Sodea/Byungkyool-F1-Fina_Sodea
Citrus-FlyingDragon/Flying Dragon-RIL-1996
Citrus-GiantKeyLime-F1
Citrus-Hanayu-F1
Citrus-Harehime/Yoshida-F1-Harehime
Citrus-Harehime/Yoshida-F1-Yoshida
Citrus-HJ/ZK-F1
Citrus-Hyuganatsu/2-11-BC1
Citrus-Li2/Wan2-F1-2015
Citrus-Murcott/Pera//2*Murcott/Pera-Murcott-BC1-2007
Citrus-Murcott/Pera//2*Murcott/Pera-Pera-BC1-2007
Citrus-Murcott_x_Pera-F1
Citrus-Okitsu-46-gou/Kankitsu-Chukanbohon-Nou-5-gou-F2-2014
Citrus-Okitsu46/Okitsu56-F1
Citrus-Orlando/Clementine-F1-Clementine-2010
Citrus-Orlando/Clementine-F1-Orlando-2010
Citrus-Pomeroy/2*ThongDee-BC1-1994
Citrus-Pomeroy/Selection 1740//Duncan/Selection LB121-BC1-1992
Citrus-Pomeroy/USDA17-40-BC1-1992-1
Citrus-Pomeroy/USDA17-40-BC1-1992-2
Citrus-R/Pr-2023
Citrus-Sacaton/Troyer-RIL-1997
Citrus-Sacaton/Troyer//Pomeroy/Pomeroy//FlyingDragon/Flying Dragon-F1-1998
Citrus-Sanford/Argentina-Argentina-F1
Citrus-Sanford/Argentina-F1
Citrus-Sanford/Argentina-Sanford-F1
Citrus-Sunki/Rubidoux-Rubidoux-F1-1999
Citrus-Sunki/Rubidoux-Sunki-F1-1999
Citrus-ThongDee/USDA17-40-BC1-1996
Citrus-USDA1747/Nakon-BC1-2001
Citrus-Volkamer/Rubidoux-F1-1996
Citrus-Volkamer/Rubidoux-Volkamer-F1-2003
Clementine/SweetBloodOrange-F1
mandarin-Mukaku_Kishu_consensus-F1
Poncirus-FlyingDragon/FlyingDragon-RIL-2003
Poncirus/Citrus-SynthesisMap-Ref-F1
Linkage Group
LG01
LG02
LG03
LG04
LG05
LG06
LG07
LG08
LG09
Submit
Select Comparison Map:
(View Correspondence Matrix)
Show comparison map
Download Table
Species
Citrus spp.
Map
Citrus-Clementine/Trifoliate-HAU21-F1-Maternal (16)
Linkage Group
LG01 (16)
Submit
Show genome view
Invert scaffold
Download Table
Whole Genome
- None -
Chromosome/Scaffold
- None -
Submit
Display Settings:
Marker color
SLAF
SSR
genetic marker
Indel
salmonPink
paleOrange
orange
redBrown
eggBlue
violetPurple
tealGreen
deepGreen
avocadoGreen
medGray
medGray2
black
blue
darkPurple
Submit
Reset
Marker visibility
SLAF
SSR
genetic marker
Indel
Show
Hide
Submit
Reset
Show ruler
Show marker position
Expand QTL
Submit