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Species
Citrus australasica
Citrus australis
Citrus clementina
Citrus glauca
Citrus ichangensis
Citrus inodora
Citrus limon
Citrus maxima
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Citrus reticulata
Citrus sinensis
Poncirus trifoliata
Atalantia buxifolia
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Ca. Liberibacter asiaticus
Ca. Liberibacter africanus
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MapViewer
Change Map
Short video tutorial
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Text tutorial
LG1 of map Clementine/SweetBloodOrange-F1
To zoom in, drag the mouse across the linkage group
Map Detail
0
10
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30
40
50
60
70
80
90
100
110
120
cM
DCACONC
scaffold_1_1171206
scaffold_1_964661
scaffold_1_2440649
scaffold_1_2843529
scaffold_1_3219196
scaffold_1_4054995
scaffold_1_4846181
scaffold_1_6414006
scaffold_1_10400304
scaffold_1_18936942
scaffold_1_20054605
scaffold_1_22894555
scaffold_1_22881707
scaffold_1_23024130
scaffold_1_25330435
scaffold_1_27190458
scaffold_1_27009947
63
64
65
66
67
68
69
70
71
72
73
74
75
DCACONC
scaffold_1_10400304
scaffold_1_11872962
scaffold_1_14702703
scaffold_1_14529862
scaffold_1_9057730
scaffold_1_12980947
scaffold_1_16697882
scaffold_1_9322114
scaffold_1_16739205
scaffold_1_18936942
scaffold_1_18175263
scaffold_1_19300133
scaffold_1_17475616
scaffold_1_18392926
scaffold_1_18477737
scaffold_1_20516192
SNP
QTL
Dot Plot
Select Reference Map:
Species
Citrus clementina
Citrus grandis
Citrus limon
Citrus reshni
Citrus reticulata
Citrus sinensis
Citrus spp.
Citrus volkameriana
Poncirus trifoliata
Map
Citrus-20-23/124-10-F1-2012
Citrus-AfinVerna/FlyingDragon-AfinVerna-F1-2002
Citrus-AfinVerna/FlyingDragon-AfinVerna-F1-2003
Citrus-AfinVerna/FlyingDragon-F1-2003
Citrus-AfinVerna/FlyingDragon-FlyingDragon-F1-2003
Citrus-Arizona/FlyingDragon-F1-1996
Citrus-C.sunki_x_Rubidoux-C.sunki-F1-2018
Citrus-C.sunki_x_Rubidoux-Rubidoux- F1-2018
Citrus-C.taiwanica/WebberFawcett//Chandler/Rubidoux//Chandler/WebberFawcett//Tahitian/FlyingDragon//Tahitian/Carrizo//Ruby/FlyingDragon//FlyingDragon/C-35Citrange-F1-1998
Citrus-C.taiwanica/WebberFawcett//Chandler/Rubidoux//Chandler/WebberFawcett//Tahitian/FlyingDragon//Tahitian/Carrizo//Ruby/FlyingDragon//FlyingDragon/C-35Citrange//Sacaton/Troyer//Pomeroy/Pomeroy//FlyingDragon/Flying Dragon-F1-1998
Citrus-Citrus_hassaku/FlyingDragon//Kiyomi//Kankitsu_Chukanbohon_Nou_8_Gou/Siamese_Acidless-BC2-2015
Citrus-Citrus_hassaku/FlyingDragon//Kiyomi//Kankitsu_Chukanbohon_Nou_8_Gou/Siamese_Acidless-BC2-2016
Citrus-Clementine/Trifoliate-HAU21-F1-Maternal
Citrus-Clementine/Trifoliate-HAU21-F1-Paternal
Citrus-Cleopatra/P.trifoliata-Cleopatra-F1-2016
Citrus-Cleopatra/P.trifoliata-P.trifoliata-F1-2016
Citrus-Cleopatra/Trifoliatesp-F2-2012
Citrus- Consensus-ThongDee/Pomeroy//USDA1740-Ambersweet/US119-LB75/USDA1747-LB121/Carrizo-Pummelo/EnglishLargeTrifoliateOrange-Foster/Kryder-1996
Citrus-C_sunki/Rubidoux-F1-Rubidoux-2020
Citrus-C_sunki/Rubidoux-F1-Sunki-2020
Citrus-DPI6.4/Rubidoux-DPI6.4-F1-2003
Citrus-DPI6.4/Rubidoux-Rubidoux-F1-2003
Citrus-Ellendale-2021
Citrus-Fina_Sodea/Byungkyool-F1-Byungkyool
Citrus-Fina_Sodea/Byungkyool-F1-Fina_Sodea
Citrus-FlyingDragon/Flying Dragon-RIL-1996
Citrus-GiantKeyLime-F1
Citrus-Hanayu-F1
Citrus-Harehime/Yoshida-F1-Harehime
Citrus-Harehime/Yoshida-F1-Yoshida
Citrus-HJ/ZK-F1
Citrus-Hyuganatsu/2-11-BC1
Citrus-Li2/Wan2-F1-2015
Citrus-Murcott/Pera//2*Murcott/Pera-Murcott-BC1-2007
Citrus-Murcott/Pera//2*Murcott/Pera-Pera-BC1-2007
Citrus-Murcott_x_Pera-F1
Citrus-Okitsu-46-gou/Kankitsu-Chukanbohon-Nou-5-gou-F2-2014
Citrus-Okitsu46/Okitsu56-F1
Citrus-Orlando/Clementine-F1-Clementine-2010
Citrus-Orlando/Clementine-F1-Orlando-2010
Citrus-Pomeroy/2*ThongDee-BC1-1994
Citrus-Pomeroy/Selection 1740//Duncan/Selection LB121-BC1-1992
Citrus-Pomeroy/USDA17-40-BC1-1992-1
Citrus-Pomeroy/USDA17-40-BC1-1992-2
Citrus-R/Pr-2023
Citrus-Sacaton/Troyer-RIL-1997
Citrus-Sacaton/Troyer//Pomeroy/Pomeroy//FlyingDragon/Flying Dragon-F1-1998
Citrus-Sanford/Argentina-Argentina-F1
Citrus-Sanford/Argentina-F1
Citrus-Sanford/Argentina-Sanford-F1
Citrus-Sunki/Rubidoux-Rubidoux-F1-1999
Citrus-Sunki/Rubidoux-Sunki-F1-1999
Citrus-ThongDee/USDA17-40-BC1-1996
Citrus-USDA1747/Nakon-BC1-2001
Citrus-Volkamer/Rubidoux-F1-1996
Citrus-Volkamer/Rubidoux-Volkamer-F1-2003
Clementine/SweetBloodOrange-F1
mandarin-Mukaku_Kishu_consensus-F1
Poncirus-FlyingDragon/FlyingDragon-RIL-2003
Poncirus/Citrus-SynthesisMap-Ref-F1
Linkage Group
LG1
LG2
LG3
LG4
LG5
LG6
LG7
LG8
LG9
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Species
Citrus spp.
Map
Clementine/SweetBloodOrange-F1 (154)
Linkage Group
LG1 (154)
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Whole Genome
Citrus clementina genome v1.0 (JGI)
Chromosome/Scaffold
scaffold_1
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salmonPink
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