Citrus limon cv. Eureka genome v1.0

Overview
Analysis NameCitrus limon cv. Eureka genome v1.0
MethodPacBio, ONT, Hi-C, Illumina (Assembly with Hifiasm, minimap2)
SourceNGDC-CNCB Genome Warehouse
Date performed2023-04-28

About the assembly

For this genome, please cite Bao et al, A gap-free and haplotype-resolved lemon genome provides insights into flavor synthesis and huanglongbing (HLB) tolerance.  This data was downloaded from the Genome Warehouse website, genome accession number GWHCBFQ00000000.1.  The listed Biosample cultivar designation is Eureka.  This is a haplotype assembly, both haplotypes are included in this assembly and metrics.

Assembly metrics

Assembly size 633 Mb
Number of scaffolds 18
N50 35,596,939 bp
Predicted transcripts 62,633
Annotated genes 56,667
Assembly BUSCO score (embryophyta_odb10) 99.1%
Annotation BUSCO score (embryophyta_odb10) 97.8%