Citrus limon cv. Eureka genome v1.0
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Overview
About the assembly For this genome, please cite Bao et al, A gap-free and haplotype-resolved lemon genome provides insights into flavor synthesis and huanglongbing (HLB) tolerance. This data was downloaded from the Genome Warehouse website, genome accession number GWHCBFQ00000000.1. The listed Biosample cultivar designation is Eureka. This is a haplotype assembly, both haplotypes are included in this assembly and metrics. Assembly metrics
Assembly
The Citrus limon Eureka genome v1.0 assembly file is available in FASTA format. Downloads
Gene Predictions
The Citrus limon Eureka v1.0 genome gene prediction files are available in FASTA and GFF3 formats. Downloads
Functional Analysis
Functional annotation for the Citrus limon Eureka Genome v1.0 are available for download below. The Citrus limon Eureka Genome v1.0 proteins were analyzed using InterProScan in order to assign InterPro domains and Gene Ontology (GO) terms. Pathways analysis was performed using the KEGG Automatic Annotation Server (KAAS). Downloads
Homology
Homology of the Citrus limon Eureka Genome v1.0 proteins was determined by pairwise sequence comparison using the blastp algorithm against various protein databases. An expectation value cutoff less than 1e-9 was used for the NCBI nr (Release 2021-09) and 1e-6 for the Arabidoposis proteins (Araport11), UniProtKB/SwissProt (Release 2021-09), and UniProtKB/TrEMBL (Release 2021-09) databases. The best hit reports are available for download in Excel format.
Protein Homologs
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